##gff-version 3
NA19239_chrY	CAT	gene	70536	72239	.	-	.	source_gene_common_name=LOC124905300;source_gene=hg002_chrY_paternal_1;alternative_source_transcripts=hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1;gene_id=NA19239_ch_G0000001;gene_biotype=protein_coding;gene_name=LOC124905300;gene_sources=liftoff;ID=NA19239_ch_G0000001;Name=LOC124905300
NA19239_chrY	CAT	transcript	70536	72239	100	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1;transcript_id=NA19239_ch_T0000001;gene_id=NA19239_ch_G0000001;Parent=NA19239_ch_G0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=NA19239_ch_T0000001;Name=LOC124905300
NA19239_chrY	CAT	exon	70536	71063	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1;transcript_id=NA19239_ch_T0000001;gene_id=NA19239_ch_G0000001;Parent=NA19239_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:NA19239_ch_T0000001:0;Name=LOC124905300;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	70536	71063	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1;transcript_id=NA19239_ch_T0000001;gene_id=NA19239_ch_G0000001;Parent=NA19239_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:NA19239_ch_T0000001:0;Name=LOC124905300;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	70536	70538	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1;transcript_id=NA19239_ch_T0000001;gene_id=NA19239_ch_G0000001;Parent=NA19239_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=stop_codon:NA19239_ch_T0000001;Name=LOC124905300;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	71064	71303	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1;transcript_id=NA19239_ch_T0000001;gene_id=NA19239_ch_G0000001;Parent=NA19239_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=intron:NA19239_ch_T0000001:0;Name=LOC124905300;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	71304	71674	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1;transcript_id=NA19239_ch_T0000001;gene_id=NA19239_ch_G0000001;Parent=NA19239_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:NA19239_ch_T0000001:1;Name=LOC124905300;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	71304	71674	.	-	2	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1;transcript_id=NA19239_ch_T0000001;gene_id=NA19239_ch_G0000001;Parent=NA19239_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:NA19239_ch_T0000001:1;Name=LOC124905300;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	71675	71981	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1;transcript_id=NA19239_ch_T0000001;gene_id=NA19239_ch_G0000001;Parent=NA19239_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=intron:NA19239_ch_T0000001:1;Name=LOC124905300;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	71982	72019	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1;transcript_id=NA19239_ch_T0000001;gene_id=NA19239_ch_G0000001;Parent=NA19239_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:NA19239_ch_T0000001:2;Name=LOC124905300;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	71982	72019	.	-	1	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1;transcript_id=NA19239_ch_T0000001;gene_id=NA19239_ch_G0000001;Parent=NA19239_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:NA19239_ch_T0000001:2;Name=LOC124905300;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	72020	72198	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1;transcript_id=NA19239_ch_T0000001;gene_id=NA19239_ch_G0000001;Parent=NA19239_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=intron:NA19239_ch_T0000001:2;Name=LOC124905300;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	72199	72239	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1;transcript_id=NA19239_ch_T0000001;gene_id=NA19239_ch_G0000001;Parent=NA19239_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:NA19239_ch_T0000001:3;Name=LOC124905300;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	72199	72239	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1;transcript_id=NA19239_ch_T0000001;gene_id=NA19239_ch_G0000001;Parent=NA19239_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:NA19239_ch_T0000001:3;Name=LOC124905300;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	72237	72239	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1;transcript_id=NA19239_ch_T0000001;gene_id=NA19239_ch_G0000001;Parent=NA19239_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=start_codon:NA19239_ch_T0000001;Name=LOC124905300;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	78820	99346	.	+	.	source_gene_common_name=PLCXD1;source_gene=hg002_chrY_paternal_2;gene_id=NA19239_ch_G0000002;gene_biotype=protein_coding;gene_name=PLCXD1;gene_sources=liftoff,augTM,transMap;ID=NA19239_ch_G0000002;Name=PLCXD1
NA19239_chrY	CAT	transcript	78820	99346	9920	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000002;gene_id=NA19239_ch_G0000002;Parent=NA19239_ch_G0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=NA19239_ch_T0000002;Name=PLCXD1
NA19239_chrY	CAT	exon	78820	78928	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000002;gene_id=NA19239_ch_G0000002;Parent=NA19239_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19239_ch_T0000002:0;Name=PLCXD1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	78929	79439	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000002;gene_id=NA19239_ch_G0000002;Parent=NA19239_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19239_ch_T0000002:0;Name=PLCXD1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	79440	79587	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000002;gene_id=NA19239_ch_G0000002;Parent=NA19239_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19239_ch_T0000002:1;Name=PLCXD1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	79461	79587	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000002;gene_id=NA19239_ch_G0000002;Parent=NA19239_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19239_ch_T0000002:0;Name=PLCXD1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	79461	79463	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000002;gene_id=NA19239_ch_G0000002;Parent=NA19239_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=start_codon:NA19239_ch_T0000002;Name=PLCXD1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	79588	83919	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000002;gene_id=NA19239_ch_G0000002;Parent=NA19239_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19239_ch_T0000002:1;Name=PLCXD1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	83920	84056	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000002;gene_id=NA19239_ch_G0000002;Parent=NA19239_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19239_ch_T0000002:2;Name=PLCXD1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	83920	84056	.	+	2	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000002;gene_id=NA19239_ch_G0000002;Parent=NA19239_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19239_ch_T0000002:1;Name=PLCXD1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	84057	85837	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000002;gene_id=NA19239_ch_G0000002;Parent=NA19239_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19239_ch_T0000002:2;Name=PLCXD1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	85838	85966	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000002;gene_id=NA19239_ch_G0000002;Parent=NA19239_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19239_ch_T0000002:3;Name=PLCXD1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	85838	85966	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000002;gene_id=NA19239_ch_G0000002;Parent=NA19239_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19239_ch_T0000002:2;Name=PLCXD1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	85967	86688	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000002;gene_id=NA19239_ch_G0000002;Parent=NA19239_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19239_ch_T0000002:3;Name=PLCXD1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	86689	86844	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000002;gene_id=NA19239_ch_G0000002;Parent=NA19239_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19239_ch_T0000002:4;Name=PLCXD1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	86689	86844	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000002;gene_id=NA19239_ch_G0000002;Parent=NA19239_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19239_ch_T0000002:3;Name=PLCXD1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	86845	88224	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000002;gene_id=NA19239_ch_G0000002;Parent=NA19239_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19239_ch_T0000002:4;Name=PLCXD1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	88225	88408	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000002;gene_id=NA19239_ch_G0000002;Parent=NA19239_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19239_ch_T0000002:5;Name=PLCXD1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	88225	88408	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000002;gene_id=NA19239_ch_G0000002;Parent=NA19239_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19239_ch_T0000002:4;Name=PLCXD1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	88409	95104	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000002;gene_id=NA19239_ch_G0000002;Parent=NA19239_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19239_ch_T0000002:5;Name=PLCXD1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	95105	99346	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000002;gene_id=NA19239_ch_G0000002;Parent=NA19239_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19239_ch_T0000002:6;Name=PLCXD1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	95105	95343	.	+	2	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000002;gene_id=NA19239_ch_G0000002;Parent=NA19239_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19239_ch_T0000002:5;Name=PLCXD1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	95341	95343	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000002;gene_id=NA19239_ch_G0000002;Parent=NA19239_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=stop_codon:NA19239_ch_T0000002;Name=PLCXD1;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	100747	115551	.	-	.	source_gene_common_name=GTPBP6;source_gene=hg002_chrY_paternal_3;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;gene_id=NA19239_ch_G0000003;gene_biotype=protein_coding;gene_name=GTPBP6;gene_sources=liftoff,augTM;ID=NA19239_ch_G0000003;Name=GTPBP6
NA19239_chrY	CAT	transcript	100747	113623	100	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000003;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=NA19239_ch_T0000003;Name=GTPBP6
NA19239_chrY	CAT	exon	100747	101185	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000003;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000003:0;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	101062	101185	.	-	1	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000003;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000003:0;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	101062	101064	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000003;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:NA19239_ch_T0000003;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	101186	103295	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000003;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000003:0;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	103296	103448	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000003;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000003:1;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	103296	103448	.	-	1	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000003;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000003:1;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	103449	103667	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000003;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000003:1;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	103668	103816	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000003;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000003:2;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	103668	103816	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000003;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000003:2;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	103817	108133	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000003;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000003:2;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	108134	108342	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000003;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000003:3;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	108134	108342	.	-	2	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000003;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000003:3;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	108343	109343	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000003;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000003:3;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	109344	109736	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000003;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000003:4;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	109344	109736	.	-	2	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000003;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000003:4;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	109737	111041	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000003;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000003:4;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	111042	111109	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000003;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000003:5;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	111042	111109	.	-	1	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000003;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000003:5;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	111110	111781	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000003;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000003:5;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	111782	111912	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000003;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000003:6;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	111782	111912	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000003;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000003:6;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	111913	112120	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000003;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000003:6;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	112121	112191	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000003;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000003:7;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	112121	112138	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000003;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000003:7;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	112136	112138	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000003;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:NA19239_ch_T0000003;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	112192	113557	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000003;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000003:7;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	113558	113623	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000003;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000003:8;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	100747	115551	100	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000004;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=NA19239_ch_T0000004;Name=GTPBP6
NA19239_chrY	CAT	exon	100747	101185	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000004;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000004;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000004:0;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	101062	101185	.	-	1	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000004;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000004;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000004:0;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	101062	101064	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000004;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000004;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:NA19239_ch_T0000004;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	101186	103295	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000004;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000004;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000004:0;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	103296	103448	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000004;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000004;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000004:1;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	103296	103448	.	-	1	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000004;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000004;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000004:1;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	103449	103667	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000004;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000004;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000004:1;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	103668	103816	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000004;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000004;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000004:2;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	103668	103816	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000004;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000004;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000004:2;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	103817	108133	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000004;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000004;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000004:2;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	108134	108342	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000004;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000004;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000004:3;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	108134	108342	.	-	2	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000004;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000004;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000004:3;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	108343	109577	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000004;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000004;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000004:3;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	109578	109736	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000004;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000004;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000004:4;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	109578	109736	.	-	2	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000004;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000004;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000004:4;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	109737	111041	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000004;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000004;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000004:4;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	111042	111109	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000004;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000004;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000004:5;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	111042	111109	.	-	1	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000004;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000004;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000004:5;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	111110	111781	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000004;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000004;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000004:5;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	111782	111912	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000004;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000004;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000004:6;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	111782	111912	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000004;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000004;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000004:6;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	111913	112120	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000004;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000004;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000004:6;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	112121	112191	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000004;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000004;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000004:7;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	112121	112191	.	-	2	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000004;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000004;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000004:7;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	112192	113691	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000004;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000004;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000004:7;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	113692	113829	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000004;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000004;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000004:8;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	113692	113829	.	-	2	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000004;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000004;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000004:8;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	113830	115193	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000004;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000004;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000004:8;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	115194	115551	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000004;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000004;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000004:9;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	115194	115542	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000004;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000004;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000004:9;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	115540	115542	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000004;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000004;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:NA19239_ch_T0000004;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	100747	115551	100	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000005;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=NA19239_ch_T0000005;Name=GTPBP6
NA19239_chrY	CAT	exon	100747	101185	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000005;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000005:0;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	101062	101185	.	-	1	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000005;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000005:0;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	101062	101064	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000005;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:NA19239_ch_T0000005;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	101186	103295	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000005;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000005:0;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	103296	103448	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000005;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000005:1;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	103296	103448	.	-	1	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000005;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000005:1;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	103449	103667	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000005;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000005:1;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	103668	103816	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000005;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000005:2;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	103668	103816	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000005;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000005:2;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	103817	108133	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000005;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000005:2;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	108134	108342	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000005;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000005:3;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	108134	108342	.	-	2	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000005;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000005:3;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	108343	109343	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000005;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000005:3;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	109344	109736	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000005;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000005:4;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	109344	109736	.	-	2	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000005;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000005:4;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	109737	111041	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000005;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000005:4;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	111042	111109	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000005;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000005:5;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	111042	111109	.	-	1	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000005;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000005:5;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	111110	111781	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000005;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000005:5;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	111782	111912	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000005;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000005:6;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	111782	111912	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000005;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000005:6;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	111913	112120	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000005;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000005:6;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	112121	112191	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000005;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000005:7;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	112121	112191	.	-	2	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000005;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000005:7;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	112192	113691	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000005;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000005:7;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	113692	113829	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000005;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000005:8;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	113692	113829	.	-	2	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000005;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000005:8;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	113830	115193	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000005;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000005:8;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	115194	115551	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000005;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000005:9;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	115194	115542	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000005;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000005:9;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	115540	115542	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000005;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000005;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:NA19239_ch_T0000005;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	100747	115551	100	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000006;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=NA19239_ch_T0000006;Name=GTPBP6
NA19239_chrY	CAT	exon	100747	101185	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000006;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000006:0;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	101062	101185	.	-	1	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000006;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000006:0;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	101062	101064	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000006;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:NA19239_ch_T0000006;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	101186	103295	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000006;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000006:0;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	103296	103448	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000006;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000006:1;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	103296	103448	.	-	1	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000006;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000006:1;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	103449	103667	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000006;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000006:1;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	103668	103816	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000006;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000006:2;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	103668	103816	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000006;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000006:2;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	103817	108133	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000006;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000006:2;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	108134	108342	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000006;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000006:3;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	108134	108342	.	-	2	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000006;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000006:3;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	108343	109343	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000006;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000006:3;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	109344	109736	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000006;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000006:4;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	109344	109736	.	-	2	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000006;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000006:4;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	109737	111041	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000006;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000006:4;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	111042	111109	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000006;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000006:5;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	111042	111109	.	-	1	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000006;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000006:5;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	111110	111781	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000006;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000006:5;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	111782	111912	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000006;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000006:6;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	111782	111912	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000006;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000006:6;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	111913	112120	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000006;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000006:6;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	112121	112191	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000006;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000006:7;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	112121	112191	.	-	2	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000006;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000006:7;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	112192	113691	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000006;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000006:7;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	113692	113829	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000006;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000006:8;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	113692	113761	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000006;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000006:8;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	113759	113761	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000006;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:NA19239_ch_T0000006;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	113830	114033	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000006;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000006:8;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	114034	114239	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000006;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000006:9;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	114240	115193	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000006;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000006:9;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	115194	115551	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000006;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000006:10;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	100747	115551	100	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000007;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=NA19239_ch_T0000007;Name=GTPBP6
NA19239_chrY	CAT	exon	100747	101185	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000007;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000007:0;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	101062	101185	.	-	1	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000007;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000007:0;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	101062	101064	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000007;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:NA19239_ch_T0000007;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	101186	103295	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000007;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000007:0;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	103296	103448	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000007;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000007:1;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	103296	103448	.	-	1	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000007;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000007:1;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	103449	103667	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000007;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000007:1;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	103668	103816	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000007;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000007:2;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	103668	103816	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000007;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000007:2;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	103817	108133	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000007;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000007:2;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	108134	108342	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000007;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000007:3;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	108134	108342	.	-	2	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000007;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000007:3;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	108343	109343	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000007;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000007:3;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	109344	109736	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000007;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000007:4;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	109344	109736	.	-	2	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000007;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000007:4;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	109737	111041	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000007;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000007:4;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	111042	111109	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000007;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000007:5;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	111042	111109	.	-	1	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000007;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000007:5;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	111110	111781	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000007;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000007:5;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	111782	111912	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000007;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000007:6;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	111782	111912	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000007;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000007:6;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	111913	112120	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000007;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000007:6;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	112121	112191	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000007;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000007:7;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	112121	112191	.	-	2	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000007;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000007:7;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	112192	113691	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000007;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000007:7;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	113692	113829	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000007;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000007:8;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	113692	113761	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000007;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19239_ch_T0000007:8;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	113759	113761	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000007;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:NA19239_ch_T0000007;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	113830	114033	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000007;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000007:8;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	114034	114174	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000007;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000007:9;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	114175	115193	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000007;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19239_ch_T0000007:9;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	115194	115551	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000007;gene_id=NA19239_ch_G0000003;Parent=NA19239_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19239_ch_T0000007:10;Name=GTPBP6;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	115900	118084	.	+	.	source_gene_common_name=LINC00685;source_gene=hg002_chrY_paternal_4;alternative_source_transcripts=hg002_chrY_paternal_4.1,hg002_chrY_paternal_4.1;gene_id=NA19239_ch_G0000004;gene_biotype=lncRNA;gene_name=LINC00685;gene_sources=liftoff;ID=NA19239_ch_G0000004;Name=LINC00685
NA19239_chrY	CAT	transcript	115900	118084	1000	+	.	source_transcript=hg002_chrY_paternal_4.1;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_4.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;alternative_source_transcripts=hg002_chrY_paternal_4.1,hg002_chrY_paternal_4.1;transcript_id=NA19239_ch_T0000008;gene_id=NA19239_ch_G0000004;Parent=NA19239_ch_G0000004;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=NA19239_ch_T0000008;Name=LINC00685
NA19239_chrY	CAT	exon	115900	116303	.	+	.	source_transcript=hg002_chrY_paternal_4.1;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_4.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;alternative_source_transcripts=hg002_chrY_paternal_4.1,hg002_chrY_paternal_4.1;transcript_id=NA19239_ch_T0000008;gene_id=NA19239_ch_G0000004;Parent=NA19239_ch_T0000008;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=exon:NA19239_ch_T0000008:0;Name=LINC00685;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	116304	116959	.	+	.	source_transcript=hg002_chrY_paternal_4.1;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_4.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;alternative_source_transcripts=hg002_chrY_paternal_4.1,hg002_chrY_paternal_4.1;transcript_id=NA19239_ch_T0000008;gene_id=NA19239_ch_G0000004;Parent=NA19239_ch_T0000008;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=intron:NA19239_ch_T0000008:0;Name=LINC00685;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	116960	118084	.	+	.	source_transcript=hg002_chrY_paternal_4.1;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_4.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;alternative_source_transcripts=hg002_chrY_paternal_4.1,hg002_chrY_paternal_4.1;transcript_id=NA19239_ch_T0000008;gene_id=NA19239_ch_G0000004;Parent=NA19239_ch_T0000008;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=exon:NA19239_ch_T0000008:1;Name=LINC00685;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	115900	118084	1000	+	.	source_transcript=hg002_chrY_paternal_4.2;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_4.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;alternative_source_transcripts=hg002_chrY_paternal_4.2,hg002_chrY_paternal_4.2;transcript_id=NA19239_ch_T0000009;gene_id=NA19239_ch_G0000004;Parent=NA19239_ch_G0000004;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=NA19239_ch_T0000009;Name=LINC00685
NA19239_chrY	CAT	exon	115900	118084	.	+	.	source_transcript=hg002_chrY_paternal_4.2;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_4.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;alternative_source_transcripts=hg002_chrY_paternal_4.2,hg002_chrY_paternal_4.2;transcript_id=NA19239_ch_T0000009;gene_id=NA19239_ch_G0000004;Parent=NA19239_ch_T0000009;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=exon:NA19239_ch_T0000009:0;Name=LINC00685;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	132742	184428	.	-	.	source_gene_common_name=PPP2R3B;source_gene=hg002_chrY_paternal_5;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;gene_id=NA19239_ch_G0000005;gene_biotype=protein_coding;gene_name=PPP2R3B;gene_sources=liftoff,augTM;ID=NA19239_ch_G0000005;Name=PPP2R3B
NA19239_chrY	CAT	transcript	132742	174445	100	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=NA19239_ch_T0000010;Name=PPP2R3B
NA19239_chrY	CAT	exon	132742	133326	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000010:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	133176	133326	.	-	1	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000010:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	133176	133178	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:NA19239_ch_T0000010;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	133327	137412	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000010:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	137413	137519	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000010:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	137413	137519	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000010:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	137520	137586	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000010:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	137587	137705	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000010:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	137587	137705	.	-	2	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000010:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	137706	139537	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000010:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	139538	139713	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000010:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	139538	139713	.	-	1	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000010:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	139714	140040	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000010:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	140041	140130	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000010:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	140041	140130	.	-	1	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000010:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	140131	140615	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000010:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	140616	140664	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000010:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	140616	140664	.	-	2	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000010:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	140665	143195	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000010:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	143196	143352	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000010:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	143196	143352	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000010:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	143353	143866	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000010:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	143867	143953	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000010:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	143867	143953	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000010:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	143954	144393	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000010:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	144394	144468	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000010:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	144394	144468	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000010:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	144469	144926	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000010:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	144927	145029	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000010:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	144927	145029	.	-	1	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000010:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	145030	145282	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000010:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	145283	145386	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000010:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	145283	145386	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000010:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	145387	159881	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000010:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	159882	160067	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000010:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	159882	160067	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000010:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	160068	171739	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000010:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	171740	174445	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000010:12;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	171740	171979	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000010:12;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	171977	171979	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000010;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000010;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:NA19239_ch_T0000010;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	132742	184428	100	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=NA19239_ch_T0000011;Name=PPP2R3B
NA19239_chrY	CAT	exon	132742	133326	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000011:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	133176	133326	.	-	1	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000011:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	133176	133178	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:NA19239_ch_T0000011;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	133327	137412	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000011:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	137413	137519	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000011:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	137413	137519	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000011:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	137520	137586	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000011:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	137587	137705	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000011:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	137587	137705	.	-	2	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000011:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	137706	139537	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000011:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	139538	139713	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000011:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	139538	139713	.	-	1	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000011:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	139714	140040	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000011:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	140041	140130	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000011:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	140041	140130	.	-	1	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000011:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	140131	140615	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000011:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	140616	140664	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000011:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	140616	140664	.	-	2	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000011:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	140665	143195	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000011:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	143196	143352	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000011:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	143196	143352	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000011:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	143353	143866	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000011:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	143867	143953	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000011:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	143867	143953	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000011:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	143954	144393	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000011:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	144394	144468	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000011:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	144394	144468	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000011:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	144469	144926	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000011:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	144927	145029	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000011:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	144927	145029	.	-	1	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000011:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	145030	145282	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000011:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	145283	145386	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000011:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	145283	145386	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000011:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	145387	159881	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000011:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	159882	160067	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000011:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	159882	160067	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000011:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	160068	183888	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000011:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	183889	184428	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000011:12;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	183889	184212	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000011:12;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	184210	184212	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000011;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000011;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:NA19239_ch_T0000011;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	133047	164370	100	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=NA19239_ch_T0000012;Name=PPP2R3B
NA19239_chrY	CAT	exon	133047	133872	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000012:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	133176	133872	.	-	1	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000012:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	133176	133178	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:NA19239_ch_T0000012;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	133873	137412	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000012:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	137413	137519	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000012:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	137413	137519	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000012:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	137520	137586	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000012:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	137587	137705	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000012:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	137587	137705	.	-	2	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000012:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	137706	139537	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000012:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	139538	139713	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000012:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	139538	139713	.	-	1	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000012:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	139714	140040	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000012:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	140041	140130	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000012:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	140041	140130	.	-	1	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000012:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	140131	140615	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000012:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	140616	140664	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000012:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	140616	140664	.	-	2	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000012:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	140665	143195	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000012:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	143196	143352	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000012:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	143196	143352	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000012:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	143353	143866	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000012:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	143867	143953	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000012:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	143867	143953	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000012:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	143954	144393	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000012:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	144394	144468	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000012:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	144394	144468	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000012:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	144469	144926	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000012:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	144927	145029	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000012:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	144927	145029	.	-	1	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000012:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	145030	145282	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000012:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	145283	145386	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000012:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	145283	145386	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000012:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	145387	159881	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000012:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	159882	160067	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000012:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	159882	159908	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000012:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	159906	159908	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:NA19239_ch_T0000012;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	160068	160731	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000012:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	160732	160809	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000012:12;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	160810	163814	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000012:12;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	163815	164370	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000012;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000012;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000012:13;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	133047	174445	100	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=NA19239_ch_T0000013;Name=PPP2R3B
NA19239_chrY	CAT	exon	133047	133872	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000013:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	133176	133872	.	-	1	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000013:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	133176	133178	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:NA19239_ch_T0000013;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	133873	137412	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000013:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	137413	137519	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000013:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	137413	137519	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000013:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	137520	137586	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000013:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	137587	137705	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000013:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	137587	137705	.	-	2	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000013:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	137706	139537	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000013:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	139538	139713	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000013:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	139538	139713	.	-	1	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000013:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	139714	140040	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000013:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	140041	140130	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000013:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	140041	140130	.	-	1	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000013:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	140131	140615	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000013:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	140616	140664	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000013:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	140616	140664	.	-	2	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000013:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	140665	143195	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000013:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	143196	143352	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000013:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	143196	143352	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000013:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	143353	143866	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000013:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	143867	143953	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000013:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	143867	143953	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000013:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	143954	144393	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000013:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	144394	144468	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000013:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	144394	144468	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000013:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	144469	144926	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000013:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	144927	145029	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000013:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	144927	145029	.	-	1	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000013:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	145030	145282	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000013:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	145283	145386	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000013:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	145283	145386	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000013:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	145387	159881	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000013:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	159882	160067	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000013:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	159882	160067	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000013:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	160068	171739	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000013:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	171740	174445	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000013:12;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	171740	171979	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000013:12;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	171977	171979	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000013;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:NA19239_ch_T0000013;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	133047	184428	100	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=NA19239_ch_T0000014;Name=PPP2R3B
NA19239_chrY	CAT	exon	133047	133872	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000014:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	133176	133872	.	-	1	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000014:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	133176	133178	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:NA19239_ch_T0000014;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	133873	137412	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000014:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	137413	137519	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000014:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	137413	137519	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000014:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	137520	137586	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000014:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	137587	137705	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000014:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	137587	137705	.	-	2	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000014:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	137706	139537	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000014:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	139538	139713	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000014:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	139538	139713	.	-	1	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000014:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	139714	140040	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000014:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	140041	140130	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000014:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	140041	140130	.	-	1	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000014:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	140131	140615	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000014:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	140616	140664	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000014:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	140616	140664	.	-	2	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000014:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	140665	143195	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000014:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	143196	143352	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000014:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	143196	143352	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000014:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	143353	143866	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000014:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	143867	143953	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000014:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	143867	143953	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000014:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	143954	144393	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000014:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	144394	144468	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000014:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	144394	144468	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000014:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	144469	144926	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000014:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	144927	145029	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000014:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	144927	145029	.	-	1	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000014:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	145030	145282	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000014:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	145283	145386	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000014:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	145283	145386	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000014:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	145387	159881	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000014:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	159882	160067	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000014:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	159882	160067	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000014:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	160068	183888	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000014:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	183889	184428	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000014:12;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	183889	184212	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000014:12;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	184210	184212	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000014;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:NA19239_ch_T0000014;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	133047	184428	100	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=NA19239_ch_T0000015;Name=PPP2R3B
NA19239_chrY	CAT	exon	133047	133872	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000015:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	133176	133872	.	-	1	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000015:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	133176	133178	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:NA19239_ch_T0000015;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	133873	137412	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000015:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	137413	137519	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000015:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	137413	137519	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000015:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	137520	137586	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000015:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	137587	137705	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000015:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	137587	137705	.	-	2	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000015:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	137706	139537	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000015:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	139538	139713	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000015:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	139538	139713	.	-	1	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000015:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	139714	140040	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000015:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	140041	140130	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000015:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	140041	140130	.	-	1	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000015:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	140131	140615	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000015:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	140616	140664	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000015:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	140616	140664	.	-	2	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000015:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	140665	143195	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000015:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	143196	143352	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000015:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	143196	143352	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000015:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	143353	143866	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000015:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	143867	143953	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000015:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	143867	143953	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000015:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	143954	144393	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000015:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	144394	144468	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000015:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	144394	144468	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000015:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	144469	144926	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000015:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	144927	145029	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000015:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	144927	145029	.	-	1	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000015:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	145030	145282	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000015:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	145283	145386	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000015:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	145283	145386	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000015:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	145387	159881	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000015:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	159882	160067	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000015:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	159882	159908	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000015:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	159906	159908	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:NA19239_ch_T0000015;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	160068	160731	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000015:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	160732	160809	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000015:12;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	160810	183888	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000015:12;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	183889	184428	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000015;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000015:13;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	133047	184428	100	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=NA19239_ch_T0000016;Name=PPP2R3B
NA19239_chrY	CAT	exon	133047	133872	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000016:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	133176	133872	.	-	1	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000016:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	133176	133178	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:NA19239_ch_T0000016;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	133873	137412	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000016:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	137413	137519	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000016:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	137413	137519	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000016:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	137520	137586	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000016:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	137587	137705	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000016:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	137587	137705	.	-	2	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000016:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	137706	139537	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000016:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	139538	139713	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000016:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	139538	139713	.	-	1	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000016:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	139714	140040	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000016:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	140041	140130	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000016:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	140041	140130	.	-	1	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000016:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	140131	140615	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000016:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	140616	140664	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000016:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	140616	140664	.	-	2	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000016:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	140665	143195	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000016:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	143196	143352	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000016:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	143196	143352	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000016:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	143353	143866	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000016:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	143867	143953	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000016:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	143867	143953	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000016:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	143954	144393	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000016:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	144394	144468	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000016:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	144394	144468	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000016:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	144469	144926	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000016:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	144927	145029	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000016:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	144927	145029	.	-	1	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000016:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	145030	145282	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000016:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	145283	145386	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000016:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	145283	145386	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000016:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	145387	159881	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000016:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	159882	160067	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000016:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	159882	159908	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000016:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	159906	159908	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:NA19239_ch_T0000016;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	160068	160731	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000016:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	160732	160809	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000016:12;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	160810	182564	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000016:12;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	182565	182628	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000016:13;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	182629	183888	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000016:13;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	183889	184428	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000016;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000016:14;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	133767	184428	100	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=NA19239_ch_T0000017;Name=PPP2R3B
NA19239_chrY	CAT	exon	133767	134807	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000017:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	134687	134807	.	-	1	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000017:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	134687	134689	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:NA19239_ch_T0000017;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	134808	137412	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000017:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	137413	137519	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000017:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	137413	137519	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000017:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	137520	137586	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000017:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	137587	137705	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000017:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	137587	137705	.	-	2	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000017:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	137706	139537	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000017:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	139538	139713	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000017:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	139538	139713	.	-	1	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000017:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	139714	140040	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000017:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	140041	140130	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000017:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	140041	140130	.	-	1	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000017:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	140131	140615	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000017:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	140616	140664	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000017:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	140616	140664	.	-	2	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000017:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	140665	143195	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000017:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	143196	143352	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000017:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	143196	143352	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000017:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	143353	143866	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000017:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	143867	143953	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000017:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	143867	143953	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000017:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	143954	144393	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000017:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	144394	144468	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000017:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	144394	144468	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000017:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	144469	144926	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000017:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	144927	145029	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000017:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	144927	145029	.	-	1	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000017:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	145030	145282	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000017:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	145283	145386	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000017:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	145283	145386	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000017:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	145387	159881	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000017:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	159882	160067	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000017:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	159882	160067	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000017:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	160068	183888	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19239_ch_T0000017:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	183889	184428	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19239_ch_T0000017:12;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	183889	184212	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19239_ch_T0000017:12;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	184210	184212	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000017;gene_id=NA19239_ch_G0000005;Parent=NA19239_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:NA19239_ch_T0000017;Name=PPP2R3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	228574	271807	.	+	.	source_gene_common_name=LOC102724521;source_gene=hg002_chrY_paternal_6;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;gene_id=NA19239_ch_G0000006;gene_biotype=lncRNA;gene_name=LOC102724521;gene_sources=liftoff;ID=NA19239_ch_G0000006;Name=LOC102724521
NA19239_chrY	CAT	transcript	228574	271807	1000	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=NA19239_ch_T0000018;gene_id=NA19239_ch_G0000006;Parent=NA19239_ch_G0000006;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=NA19239_ch_T0000018;Name=LOC102724521
NA19239_chrY	CAT	exon	228574	229042	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=NA19239_ch_T0000018;gene_id=NA19239_ch_G0000006;Parent=NA19239_ch_T0000018;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:NA19239_ch_T0000018:0;Name=LOC102724521;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	229043	232922	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=NA19239_ch_T0000018;gene_id=NA19239_ch_G0000006;Parent=NA19239_ch_T0000018;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:NA19239_ch_T0000018:0;Name=LOC102724521;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	232923	233180	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=NA19239_ch_T0000018;gene_id=NA19239_ch_G0000006;Parent=NA19239_ch_T0000018;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:NA19239_ch_T0000018:1;Name=LOC102724521;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	233181	234665	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=NA19239_ch_T0000018;gene_id=NA19239_ch_G0000006;Parent=NA19239_ch_T0000018;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:NA19239_ch_T0000018:1;Name=LOC102724521;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	234666	234780	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=NA19239_ch_T0000018;gene_id=NA19239_ch_G0000006;Parent=NA19239_ch_T0000018;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:NA19239_ch_T0000018:2;Name=LOC102724521;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	234781	236308	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=NA19239_ch_T0000018;gene_id=NA19239_ch_G0000006;Parent=NA19239_ch_T0000018;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:NA19239_ch_T0000018:2;Name=LOC102724521;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	236309	236475	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=NA19239_ch_T0000018;gene_id=NA19239_ch_G0000006;Parent=NA19239_ch_T0000018;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:NA19239_ch_T0000018:3;Name=LOC102724521;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	236476	240018	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=NA19239_ch_T0000018;gene_id=NA19239_ch_G0000006;Parent=NA19239_ch_T0000018;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:NA19239_ch_T0000018:3;Name=LOC102724521;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	240019	240091	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=NA19239_ch_T0000018;gene_id=NA19239_ch_G0000006;Parent=NA19239_ch_T0000018;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:NA19239_ch_T0000018:4;Name=LOC102724521;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	240092	240324	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=NA19239_ch_T0000018;gene_id=NA19239_ch_G0000006;Parent=NA19239_ch_T0000018;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:NA19239_ch_T0000018:4;Name=LOC102724521;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	240325	240629	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=NA19239_ch_T0000018;gene_id=NA19239_ch_G0000006;Parent=NA19239_ch_T0000018;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:NA19239_ch_T0000018:5;Name=LOC102724521;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	240630	258536	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=NA19239_ch_T0000018;gene_id=NA19239_ch_G0000006;Parent=NA19239_ch_T0000018;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:NA19239_ch_T0000018:5;Name=LOC102724521;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	258537	259149	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=NA19239_ch_T0000018;gene_id=NA19239_ch_G0000006;Parent=NA19239_ch_T0000018;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:NA19239_ch_T0000018:6;Name=LOC102724521;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	259150	268594	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=NA19239_ch_T0000018;gene_id=NA19239_ch_G0000006;Parent=NA19239_ch_T0000018;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:NA19239_ch_T0000018:6;Name=LOC102724521;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	268595	268715	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=NA19239_ch_T0000018;gene_id=NA19239_ch_G0000006;Parent=NA19239_ch_T0000018;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:NA19239_ch_T0000018:7;Name=LOC102724521;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	268716	269763	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=NA19239_ch_T0000018;gene_id=NA19239_ch_G0000006;Parent=NA19239_ch_T0000018;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:NA19239_ch_T0000018:7;Name=LOC102724521;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	269764	269962	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=NA19239_ch_T0000018;gene_id=NA19239_ch_G0000006;Parent=NA19239_ch_T0000018;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:NA19239_ch_T0000018:8;Name=LOC102724521;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	269963	270567	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=NA19239_ch_T0000018;gene_id=NA19239_ch_G0000006;Parent=NA19239_ch_T0000018;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:NA19239_ch_T0000018:8;Name=LOC102724521;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	270568	271807	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=NA19239_ch_T0000018;gene_id=NA19239_ch_G0000006;Parent=NA19239_ch_T0000018;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:NA19239_ch_T0000018:9;Name=LOC102724521;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	228818	242101	1000	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=NA19239_ch_T0000019;gene_id=NA19239_ch_G0000006;Parent=NA19239_ch_G0000006;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=NA19239_ch_T0000019;Name=LOC102724521
NA19239_chrY	CAT	exon	228818	229042	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=NA19239_ch_T0000019;gene_id=NA19239_ch_G0000006;Parent=NA19239_ch_T0000019;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:NA19239_ch_T0000019:0;Name=LOC102724521;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	229043	232922	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=NA19239_ch_T0000019;gene_id=NA19239_ch_G0000006;Parent=NA19239_ch_T0000019;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:NA19239_ch_T0000019:0;Name=LOC102724521;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	232923	233180	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=NA19239_ch_T0000019;gene_id=NA19239_ch_G0000006;Parent=NA19239_ch_T0000019;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:NA19239_ch_T0000019:1;Name=LOC102724521;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	233181	234665	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=NA19239_ch_T0000019;gene_id=NA19239_ch_G0000006;Parent=NA19239_ch_T0000019;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:NA19239_ch_T0000019:1;Name=LOC102724521;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	234666	234780	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=NA19239_ch_T0000019;gene_id=NA19239_ch_G0000006;Parent=NA19239_ch_T0000019;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:NA19239_ch_T0000019:2;Name=LOC102724521;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	234781	236308	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=NA19239_ch_T0000019;gene_id=NA19239_ch_G0000006;Parent=NA19239_ch_T0000019;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:NA19239_ch_T0000019:2;Name=LOC102724521;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	236309	236475	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=NA19239_ch_T0000019;gene_id=NA19239_ch_G0000006;Parent=NA19239_ch_T0000019;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:NA19239_ch_T0000019:3;Name=LOC102724521;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	236476	240541	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=NA19239_ch_T0000019;gene_id=NA19239_ch_G0000006;Parent=NA19239_ch_T0000019;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:NA19239_ch_T0000019:3;Name=LOC102724521;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	240542	240629	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=NA19239_ch_T0000019;gene_id=NA19239_ch_G0000006;Parent=NA19239_ch_T0000019;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:NA19239_ch_T0000019:4;Name=LOC102724521;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	240630	241416	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=NA19239_ch_T0000019;gene_id=NA19239_ch_G0000006;Parent=NA19239_ch_T0000019;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:NA19239_ch_T0000019:4;Name=LOC102724521;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	241417	242101	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=NA19239_ch_T0000019;gene_id=NA19239_ch_G0000006;Parent=NA19239_ch_T0000019;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:NA19239_ch_T0000019:5;Name=LOC102724521;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	432876	467982	.	+	.	source_gene_common_name=SHOX;source_gene=hg002_chrY_paternal_9;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;gene_id=NA19239_ch_G0000007;gene_biotype=protein_coding;gene_name=SHOX;gene_sources=liftoff,augTM;ID=NA19239_ch_G0000007;Name=SHOX
NA19239_chrY	CAT	transcript	432876	467982	100	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000020;gene_id=NA19239_ch_G0000007;Parent=NA19239_ch_G0000007;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=NA19239_ch_T0000020;Name=SHOX
NA19239_chrY	CAT	exon	432876	433135	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000020;gene_id=NA19239_ch_G0000007;Parent=NA19239_ch_T0000020;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:NA19239_ch_T0000020:0;Name=SHOX;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	433136	439808	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000020;gene_id=NA19239_ch_G0000007;Parent=NA19239_ch_T0000020;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:NA19239_ch_T0000020:0;Name=SHOX;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	439809	440517	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000020;gene_id=NA19239_ch_G0000007;Parent=NA19239_ch_T0000020;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:NA19239_ch_T0000020:1;Name=SHOX;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	440241	440517	.	+	0	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000020;gene_id=NA19239_ch_G0000007;Parent=NA19239_ch_T0000020;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:NA19239_ch_T0000020:0;Name=SHOX;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	440241	440243	.	+	0	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000020;gene_id=NA19239_ch_G0000007;Parent=NA19239_ch_T0000020;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=start_codon:NA19239_ch_T0000020;Name=SHOX;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	440518	443964	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000020;gene_id=NA19239_ch_G0000007;Parent=NA19239_ch_T0000020;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:NA19239_ch_T0000020:1;Name=SHOX;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	443965	444173	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000020;gene_id=NA19239_ch_G0000007;Parent=NA19239_ch_T0000020;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:NA19239_ch_T0000020:2;Name=SHOX;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	443965	444173	.	+	2	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000020;gene_id=NA19239_ch_G0000007;Parent=NA19239_ch_T0000020;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:NA19239_ch_T0000020:1;Name=SHOX;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	444174	450005	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000020;gene_id=NA19239_ch_G0000007;Parent=NA19239_ch_T0000020;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:NA19239_ch_T0000020:2;Name=SHOX;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	450006	450063	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000020;gene_id=NA19239_ch_G0000007;Parent=NA19239_ch_T0000020;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:NA19239_ch_T0000020:3;Name=SHOX;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	450006	450063	.	+	0	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000020;gene_id=NA19239_ch_G0000007;Parent=NA19239_ch_T0000020;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:NA19239_ch_T0000020:2;Name=SHOX;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	450064	450183	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000020;gene_id=NA19239_ch_G0000007;Parent=NA19239_ch_T0000020;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:NA19239_ch_T0000020:3;Name=SHOX;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	450184	450272	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000020;gene_id=NA19239_ch_G0000007;Parent=NA19239_ch_T0000020;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:NA19239_ch_T0000020:4;Name=SHOX;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	450184	450272	.	+	2	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000020;gene_id=NA19239_ch_G0000007;Parent=NA19239_ch_T0000020;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:NA19239_ch_T0000020:3;Name=SHOX;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	450273	467356	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000020;gene_id=NA19239_ch_G0000007;Parent=NA19239_ch_T0000020;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:NA19239_ch_T0000020:4;Name=SHOX;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	467357	467982	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000020;gene_id=NA19239_ch_G0000007;Parent=NA19239_ch_T0000020;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:NA19239_ch_T0000020:5;Name=SHOX;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	467357	467401	.	+	0	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000020;gene_id=NA19239_ch_G0000007;Parent=NA19239_ch_T0000020;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:NA19239_ch_T0000020:4;Name=SHOX;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	467399	467401	.	+	0	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000020;gene_id=NA19239_ch_G0000007;Parent=NA19239_ch_T0000020;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=stop_codon:NA19239_ch_T0000020;Name=SHOX;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	440134	460059	100	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000021;gene_id=NA19239_ch_G0000007;Parent=NA19239_ch_G0000007;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=NA19239_ch_T0000021;Name=SHOX
NA19239_chrY	CAT	exon	440134	440517	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000021;gene_id=NA19239_ch_G0000007;Parent=NA19239_ch_T0000021;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:NA19239_ch_T0000021:0;Name=SHOX;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	440241	440517	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000021;gene_id=NA19239_ch_G0000007;Parent=NA19239_ch_T0000021;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:NA19239_ch_T0000021:0;Name=SHOX;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	440241	440243	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000021;gene_id=NA19239_ch_G0000007;Parent=NA19239_ch_T0000021;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=start_codon:NA19239_ch_T0000021;Name=SHOX;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	440518	443964	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000021;gene_id=NA19239_ch_G0000007;Parent=NA19239_ch_T0000021;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:NA19239_ch_T0000021:0;Name=SHOX;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	443965	444173	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000021;gene_id=NA19239_ch_G0000007;Parent=NA19239_ch_T0000021;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:NA19239_ch_T0000021:1;Name=SHOX;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	443965	444173	.	+	2	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000021;gene_id=NA19239_ch_G0000007;Parent=NA19239_ch_T0000021;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:NA19239_ch_T0000021:1;Name=SHOX;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	444174	450005	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000021;gene_id=NA19239_ch_G0000007;Parent=NA19239_ch_T0000021;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:NA19239_ch_T0000021:1;Name=SHOX;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	450006	450063	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000021;gene_id=NA19239_ch_G0000007;Parent=NA19239_ch_T0000021;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:NA19239_ch_T0000021:2;Name=SHOX;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	450006	450063	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000021;gene_id=NA19239_ch_G0000007;Parent=NA19239_ch_T0000021;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:NA19239_ch_T0000021:2;Name=SHOX;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	450064	450183	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000021;gene_id=NA19239_ch_G0000007;Parent=NA19239_ch_T0000021;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:NA19239_ch_T0000021:2;Name=SHOX;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	450184	450272	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000021;gene_id=NA19239_ch_G0000007;Parent=NA19239_ch_T0000021;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:NA19239_ch_T0000021:3;Name=SHOX;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	450184	450272	.	+	2	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000021;gene_id=NA19239_ch_G0000007;Parent=NA19239_ch_T0000021;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:NA19239_ch_T0000021:3;Name=SHOX;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	450273	453597	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000021;gene_id=NA19239_ch_G0000007;Parent=NA19239_ch_T0000021;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:NA19239_ch_T0000021:3;Name=SHOX;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	453598	460059	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000021;gene_id=NA19239_ch_G0000007;Parent=NA19239_ch_T0000021;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:NA19239_ch_T0000021:4;Name=SHOX;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	453598	453843	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000021;gene_id=NA19239_ch_G0000007;Parent=NA19239_ch_T0000021;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:NA19239_ch_T0000021:4;Name=SHOX;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	453841	453843	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000021;gene_id=NA19239_ch_G0000007;Parent=NA19239_ch_T0000021;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=stop_codon:NA19239_ch_T0000021;Name=SHOX;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	1014842	1039274	.	-	.	source_gene_common_name=CRLF2;source_gene=hg002_chrY_paternal_13;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;gene_id=NA19239_ch_G0000008;gene_biotype=protein_coding;gene_name=CRLF2;gene_sources=liftoff,augTM;ID=NA19239_ch_G0000008;Name=CRLF2
NA19239_chrY	CAT	transcript	1014842	1039274	100	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000022;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_G0000008;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=NA19239_ch_T0000022;Name=CRLF2
NA19239_chrY	CAT	exon	1014842	1015512	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000022;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000022;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19239_ch_T0000022:0;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1015249	1015512	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000022;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000022;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19239_ch_T0000022:0;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1015249	1015251	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000022;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000022;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=stop_codon:NA19239_ch_T0000022;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1015513	1017565	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000022;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000022;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19239_ch_T0000022:0;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1017566	1017650	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000022;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000022;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19239_ch_T0000022:1;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1017566	1017650	.	-	1	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000022;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000022;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19239_ch_T0000022:1;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1017651	1021127	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000022;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000022;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19239_ch_T0000022:1;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1021128	1021248	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000022;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000022;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19239_ch_T0000022:2;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1021128	1021248	.	-	2	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000022;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000022;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19239_ch_T0000022:2;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1021249	1025159	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000022;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000022;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19239_ch_T0000022:2;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1025160	1025322	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000022;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000022;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19239_ch_T0000022:3;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1025160	1025322	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000022;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000022;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19239_ch_T0000022:3;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1025323	1029004	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000022;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000022;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19239_ch_T0000022:3;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1029005	1029138	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000022;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000022;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19239_ch_T0000022:4;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1029005	1029138	.	-	2	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000022;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000022;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19239_ch_T0000022:4;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1029139	1033055	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000022;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000022;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19239_ch_T0000022:4;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1033056	1033222	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000022;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000022;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19239_ch_T0000022:5;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1033056	1033068	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000022;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000022;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19239_ch_T0000022:5;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1033066	1033068	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000022;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000022;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=start_codon:NA19239_ch_T0000022;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1033223	1039180	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000022;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000022;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19239_ch_T0000022:5;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1039181	1039274	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000022;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000022;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19239_ch_T0000022:6;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1014842	1039274	100	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000023;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_G0000008;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=NA19239_ch_T0000023;Name=CRLF2
NA19239_chrY	CAT	exon	1014842	1015512	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000023;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000023;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19239_ch_T0000023:0;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1015249	1015512	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000023;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000023;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19239_ch_T0000023:0;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1015249	1015251	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000023;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000023;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=stop_codon:NA19239_ch_T0000023;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1015513	1017565	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000023;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000023;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19239_ch_T0000023:0;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1017566	1017650	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000023;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000023;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19239_ch_T0000023:1;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1017566	1017650	.	-	1	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000023;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000023;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19239_ch_T0000023:1;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1017651	1021127	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000023;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000023;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19239_ch_T0000023:1;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1021128	1021248	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000023;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000023;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19239_ch_T0000023:2;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1021128	1021248	.	-	2	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000023;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000023;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19239_ch_T0000023:2;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1021249	1025159	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000023;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000023;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19239_ch_T0000023:2;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1025160	1025322	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000023;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000023;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19239_ch_T0000023:3;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1025160	1025322	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000023;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000023;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19239_ch_T0000023:3;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1025323	1029004	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000023;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000023;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19239_ch_T0000023:3;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1029005	1029138	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000023;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000023;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19239_ch_T0000023:4;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1029005	1029138	.	-	2	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000023;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000023;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19239_ch_T0000023:4;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1029139	1033055	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000023;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000023;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19239_ch_T0000023:4;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1033056	1033222	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000023;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000023;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19239_ch_T0000023:5;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1033056	1033222	.	-	1	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000023;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000023;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19239_ch_T0000023:5;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1033223	1035425	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000023;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000023;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19239_ch_T0000023:5;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1035426	1035528	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000023;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000023;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19239_ch_T0000023:6;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1035426	1035528	.	-	2	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000023;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000023;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19239_ch_T0000023:6;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1035529	1039180	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000023;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000023;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19239_ch_T0000023:6;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1039181	1039274	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000023;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000023;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19239_ch_T0000023:7;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1039181	1039259	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000023;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000023;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19239_ch_T0000023:7;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1039257	1039259	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000023;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000023;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=start_codon:NA19239_ch_T0000023;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1014842	1039274	100	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000024;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_G0000008;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=NA19239_ch_T0000024;Name=CRLF2
NA19239_chrY	CAT	exon	1014842	1015512	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000024;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19239_ch_T0000024:0;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1015249	1015512	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000024;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19239_ch_T0000024:0;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1015249	1015251	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000024;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=stop_codon:NA19239_ch_T0000024;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1015513	1017565	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000024;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19239_ch_T0000024:0;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1017566	1017650	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000024;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19239_ch_T0000024:1;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1017566	1017650	.	-	1	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000024;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19239_ch_T0000024:1;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1017651	1021127	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000024;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19239_ch_T0000024:1;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1021128	1021248	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000024;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19239_ch_T0000024:2;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1021128	1021248	.	-	2	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000024;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19239_ch_T0000024:2;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1021249	1025159	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000024;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19239_ch_T0000024:2;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1025160	1025322	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000024;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19239_ch_T0000024:3;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1025160	1025322	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000024;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19239_ch_T0000024:3;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1025323	1029004	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000024;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19239_ch_T0000024:3;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1029005	1029138	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000024;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19239_ch_T0000024:4;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1029005	1029138	.	-	2	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000024;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19239_ch_T0000024:4;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1029139	1033055	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000024;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19239_ch_T0000024:4;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1033056	1033222	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000024;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19239_ch_T0000024:5;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1033056	1033222	.	-	1	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000024;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19239_ch_T0000024:5;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1033223	1035425	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000024;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19239_ch_T0000024:5;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1035426	1035525	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000024;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19239_ch_T0000024:6;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1035426	1035525	.	-	2	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000024;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19239_ch_T0000024:6;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1035526	1039180	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000024;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19239_ch_T0000024:6;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1039181	1039274	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000024;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19239_ch_T0000024:7;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1039181	1039259	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000024;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19239_ch_T0000024:7;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1039257	1039259	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000024;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=start_codon:NA19239_ch_T0000024;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1014842	1039274	1000	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000025;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_G0000008;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=NA19239_ch_T0000025;Name=CRLF2
NA19239_chrY	CAT	exon	1014842	1015512	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000025;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000025;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:NA19239_ch_T0000025:0;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1015513	1017565	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000025;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000025;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:NA19239_ch_T0000025:0;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1017566	1017650	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000025;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000025;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:NA19239_ch_T0000025:1;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1017651	1021127	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000025;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000025;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:NA19239_ch_T0000025:1;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1021128	1021248	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000025;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000025;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:NA19239_ch_T0000025:2;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1021249	1025396	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000025;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000025;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:NA19239_ch_T0000025:2;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1025397	1025741	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000025;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000025;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:NA19239_ch_T0000025:3;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1025742	1029004	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000025;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000025;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:NA19239_ch_T0000025:3;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1029005	1029138	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000025;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000025;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:NA19239_ch_T0000025:4;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1029139	1033055	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000025;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000025;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:NA19239_ch_T0000025:4;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1033056	1033222	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000025;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000025;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:NA19239_ch_T0000025:5;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1033223	1035425	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000025;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000025;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:NA19239_ch_T0000025:5;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1035426	1035525	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000025;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000025;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:NA19239_ch_T0000025:6;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1035526	1039180	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000025;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000025;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:NA19239_ch_T0000025:6;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1039181	1039274	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000025;gene_id=NA19239_ch_G0000008;Parent=NA19239_ch_T0000025;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:NA19239_ch_T0000025:7;Name=CRLF2;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	1094295	1155245	.	+	.	source_gene_common_name=CSF2RA;source_gene=hg002_chrY_paternal_14;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;gene_id=NA19239_ch_G0000009;gene_biotype=protein_coding;gene_name=CSF2RA;gene_sources=liftoff,augTM;ID=NA19239_ch_G0000009;Name=CSF2RA
NA19239_chrY	CAT	transcript	1094295	1135973	100	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19239_ch_T0000026;Name=CSF2RA
NA19239_chrY	CAT	exon	1094295	1094360	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000026:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1094361	1102422	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000026:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1102423	1102510	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000026:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1102511	1110388	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000026:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1110389	1110490	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000026:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1110415	1110490	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000026:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1110415	1110417	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19239_ch_T0000026;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110491	1113940	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000026:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1113941	1114083	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000026:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1113941	1114083	.	+	2	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000026:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1114084	1116681	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000026:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116682	1116805	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000026:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116682	1116805	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000026:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1116806	1116921	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000026:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116922	1117051	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000026:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116922	1117051	.	+	2	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000026:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1117052	1118499	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000026:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1118500	1118672	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000026:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1118500	1118672	.	+	1	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000026:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1118673	1122572	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000026:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1122573	1122706	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000026:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1122573	1122706	.	+	2	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000026:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1122707	1124103	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000026:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1124104	1124133	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000026:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1124104	1124133	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000026:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1124134	1130182	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000026:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1130183	1130318	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000026:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1130183	1130318	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000026:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1130319	1133614	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000026:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1133615	1133711	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000026:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1133615	1133711	.	+	2	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000026:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1133712	1135477	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000026:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135478	1135559	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000026:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1135478	1135559	.	+	1	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000026:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1135560	1135659	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000026:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135660	1135973	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000026:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1135660	1135767	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000026:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1135765	1135767	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000026;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000026;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19239_ch_T0000026;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1094295	1140102	100	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19239_ch_T0000027;Name=CSF2RA
NA19239_chrY	CAT	exon	1094295	1094360	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000027:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1094361	1110388	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000027:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1110389	1110490	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000027:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1110415	1110490	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000027:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1110415	1110417	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19239_ch_T0000027;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110491	1113940	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000027:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1113941	1114083	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000027:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1113941	1114083	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000027:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1114084	1116681	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000027:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116682	1116805	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000027:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116682	1116805	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000027:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1116806	1116921	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000027:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116922	1117051	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000027:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116922	1117051	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000027:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1117052	1118499	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000027:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1118500	1118672	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000027:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1118500	1118672	.	+	1	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000027:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1118673	1122572	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000027:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1122573	1122706	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000027:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1122573	1122706	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000027:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1122707	1124103	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000027:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1124104	1124133	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000027:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1124104	1124133	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000027:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1124134	1130182	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000027:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1130183	1130318	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000027:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1130183	1130318	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000027:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1130319	1132952	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000027:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1132953	1133054	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000027:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1132953	1133054	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000027:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1133055	1133614	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000027:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1133615	1133711	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000027:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1133615	1133711	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000027:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1133712	1135477	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000027:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135478	1135559	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000027:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1135478	1135559	.	+	1	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000027:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1135560	1139568	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000027:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1139569	1140102	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000027:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1139569	1139646	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000027:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1139644	1139646	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000027;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000027;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19239_ch_T0000027;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1094295	1140102	100	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19239_ch_T0000028;Name=CSF2RA
NA19239_chrY	CAT	exon	1094295	1094360	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000028:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1094361	1102422	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000028:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1102423	1102510	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000028:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1102511	1110388	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000028:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1110389	1110490	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000028:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1110415	1110490	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000028:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1110415	1110417	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19239_ch_T0000028;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110491	1113940	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000028:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1113941	1114083	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000028:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1113941	1114083	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000028:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1114084	1116681	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000028:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116682	1116805	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000028:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116682	1116805	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000028:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1116806	1116921	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000028:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116922	1117051	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000028:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116922	1117051	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000028:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1117052	1118499	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000028:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1118500	1118672	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000028:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1118500	1118672	.	+	1	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000028:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1118673	1122572	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000028:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1122573	1122706	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000028:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1122573	1122706	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000028:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1122707	1124103	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000028:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1124104	1124133	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000028:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1124104	1124133	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000028:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1124134	1130182	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000028:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1130183	1130318	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000028:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1130183	1130318	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000028:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1130319	1132952	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000028:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1132953	1133054	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000028:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1132953	1133054	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000028:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1133055	1133614	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000028:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1133615	1133711	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000028:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1133615	1133711	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000028:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1133712	1135477	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000028:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135478	1135559	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000028:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1135478	1135559	.	+	1	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000028:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1135560	1139568	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000028:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1139569	1140102	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000028:13;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1139569	1139646	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000028:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1139644	1139646	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000028;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19239_ch_T0000028;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1094295	1140102	100	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000029;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19239_ch_T0000029;Name=CSF2RA
NA19239_chrY	CAT	exon	1094295	1094360	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000029;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000029:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1094361	1110388	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000029;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000029:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1110389	1110490	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000029;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000029:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1110415	1110490	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000029;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000029:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1110415	1110417	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000029;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19239_ch_T0000029;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110491	1113940	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000029;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000029:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1113941	1114083	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000029;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000029:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1113941	1114083	.	+	2	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000029;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000029:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1114084	1116681	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000029;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000029:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116682	1116805	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000029;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000029:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116682	1116805	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000029;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000029:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1116806	1116921	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000029;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000029:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116922	1117051	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000029;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000029:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116922	1117051	.	+	2	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000029;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000029:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1117052	1118499	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000029;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000029:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1118500	1118672	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000029;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000029:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1118500	1118672	.	+	1	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000029;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000029:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1118673	1122572	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000029;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000029:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1122573	1122706	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000029;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000029:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1122573	1122706	.	+	2	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000029;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000029:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1122707	1124103	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000029;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000029:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1124104	1124133	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000029;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000029:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1124104	1124133	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000029;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000029:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1124134	1130182	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000029;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000029:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1130183	1130318	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000029;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000029:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1130183	1130318	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000029;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000029:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1130319	1133614	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000029;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000029:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1133615	1133711	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000029;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000029:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1133615	1133711	.	+	2	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000029;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000029:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1133712	1135477	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000029;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000029:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135478	1135559	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000029;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000029:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1135478	1135559	.	+	1	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000029;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000029:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1135560	1139568	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000029;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000029:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1139569	1140102	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000029;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000029:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1139569	1139646	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000029;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000029:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1139644	1139646	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000029;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19239_ch_T0000029;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1094295	1140102	100	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19239_ch_T0000030;Name=CSF2RA
NA19239_chrY	CAT	exon	1094295	1094360	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000030:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1094361	1102432	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000030:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1102433	1102486	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000030:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1102487	1110388	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000030:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1110389	1110490	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000030:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1110415	1110490	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000030:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1110415	1110417	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19239_ch_T0000030;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110491	1113940	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000030:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1113941	1114083	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000030:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1113941	1114083	.	+	2	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000030:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1114084	1116681	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000030:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116682	1116805	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000030:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116682	1116805	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000030:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1116806	1116921	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000030:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116922	1117051	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000030:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116922	1117051	.	+	2	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000030:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1117052	1118499	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000030:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1118500	1118672	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000030:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1118500	1118672	.	+	1	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000030:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1118673	1122572	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000030:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1122573	1122706	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000030:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1122573	1122706	.	+	2	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000030:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1122707	1124103	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000030:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1124104	1124133	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000030:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1124104	1124133	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000030:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1124134	1130182	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000030:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1130183	1130318	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000030:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1130183	1130318	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000030:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1130319	1133614	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000030:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1133615	1133711	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000030:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1133615	1133711	.	+	2	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000030:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1133712	1135477	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000030:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135478	1135559	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000030:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1135478	1135559	.	+	1	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000030:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1135560	1139568	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000030:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1139569	1140102	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000030:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1139569	1139646	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000030:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1139644	1139646	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000030;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19239_ch_T0000030;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1094295	1140102	100	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000031;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19239_ch_T0000031;Name=CSF2RA
NA19239_chrY	CAT	exon	1094295	1094360	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000031;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000031:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1094361	1102422	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000031;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000031:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1102423	1102486	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000031;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000031:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1102487	1110388	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000031;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000031:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1110389	1110490	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000031;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000031:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1110415	1110490	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000031;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000031:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1110415	1110417	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000031;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19239_ch_T0000031;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110491	1113940	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000031;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000031:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1113941	1114083	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000031;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000031:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1113941	1114083	.	+	2	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000031;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000031:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1114084	1116681	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000031;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000031:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116682	1116805	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000031;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000031:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116682	1116805	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000031;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000031:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1116806	1116921	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000031;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000031:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116922	1117051	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000031;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000031:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116922	1117051	.	+	2	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000031;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000031:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1117052	1118499	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000031;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000031:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1118500	1118672	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000031;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000031:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1118500	1118672	.	+	1	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000031;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000031:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1118673	1122572	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000031;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000031:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1122573	1122706	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000031;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000031:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1122573	1122706	.	+	2	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000031;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000031:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1122707	1130182	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000031;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000031:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1130183	1130318	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000031;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000031:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1130183	1130318	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000031;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000031:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1130319	1133614	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000031;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000031:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1133615	1133711	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000031;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000031:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1133615	1133711	.	+	2	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000031;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000031:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1133712	1135477	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000031;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000031:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135478	1135559	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000031;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000031:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1135478	1135559	.	+	1	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000031;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000031:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1135560	1139568	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000031;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000031:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1139569	1140102	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000031;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000031:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1139569	1139646	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000031;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000031:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1139644	1139646	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000031;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19239_ch_T0000031;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1094295	1140102	100	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000032;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19239_ch_T0000032;Name=CSF2RA
NA19239_chrY	CAT	exon	1094295	1094360	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000032;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000032:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1094361	1102422	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000032;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000032:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1102423	1102486	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000032;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000032:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1102487	1110388	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000032;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000032:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1110389	1110490	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000032;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000032:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1110415	1110490	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000032;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000032:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1110415	1110417	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000032;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19239_ch_T0000032;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110491	1113940	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000032;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000032:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1113941	1114083	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000032;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000032:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1113941	1114083	.	+	2	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000032;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000032:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1114084	1116681	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000032;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000032:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116682	1116805	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000032;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000032:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116682	1116805	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000032;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000032:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1116806	1116921	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000032;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000032:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116922	1117051	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000032;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000032:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116922	1117051	.	+	2	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000032;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000032:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1117052	1118499	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000032;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000032:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1118500	1118672	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000032;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000032:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1118500	1118672	.	+	1	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000032;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000032:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1118673	1122591	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000032;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000032:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1122592	1122706	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000032;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000032:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1122592	1122706	.	+	2	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000032;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000032:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1122707	1124103	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000032;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000032:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1124104	1124133	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000032;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000032:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1124104	1124133	.	+	1	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000032;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000032:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1124134	1128694	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000032;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000032:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1128695	1128757	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000032;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000032:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1128695	1128757	.	+	1	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000032;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000032:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1128758	1135477	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000032;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000032:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135478	1135559	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000032;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000032:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1135478	1135559	.	+	1	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000032;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000032:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1135560	1139568	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000032;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000032:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1139569	1140102	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000032;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000032:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1139569	1139646	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000032;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000032:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1139644	1139646	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000032;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19239_ch_T0000032;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1094295	1140102	100	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000033;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19239_ch_T0000033;Name=CSF2RA
NA19239_chrY	CAT	exon	1094295	1094360	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000033;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000033:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1094361	1098494	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000033;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000033:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1098495	1098616	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000033;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000033:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1098617	1102422	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000033;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000033:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1102423	1102510	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000033;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000033:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1102511	1110388	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000033;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000033:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1110389	1110490	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000033;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000033:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1110415	1110490	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000033;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000033:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1110415	1110417	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000033;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19239_ch_T0000033;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110491	1113940	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000033;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000033:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1113941	1114083	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000033;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000033:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1113941	1114083	.	+	2	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000033;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000033:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1114084	1116681	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000033;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000033:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116682	1116805	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000033;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000033:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116682	1116805	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000033;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000033:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1116806	1116921	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000033;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000033:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116922	1117051	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000033;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000033:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116922	1117051	.	+	2	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000033;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000033:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1117052	1118499	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000033;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000033:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1118500	1118672	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000033;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000033:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1118500	1118672	.	+	1	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000033;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000033:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1118673	1122572	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000033;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000033:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1122573	1122706	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000033;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000033:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1122573	1122706	.	+	2	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000033;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000033:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1122707	1124103	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000033;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000033:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1124104	1124133	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000033;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000033:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1124104	1124133	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000033;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000033:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1124134	1130182	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000033;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000033:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1130183	1130318	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000033;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000033:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1130183	1130318	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000033;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000033:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1130319	1135477	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000033;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000033:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135478	1135559	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000033;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000033:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1135478	1135533	.	+	2	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000033;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000033:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1135531	1135533	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000033;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19239_ch_T0000033;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1135560	1139568	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000033;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000033:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1139569	1140102	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000033;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000033:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1094295	1140102	100	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000034;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19239_ch_T0000034;Name=CSF2RA
NA19239_chrY	CAT	exon	1094295	1094360	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000034;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000034:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1094361	1110388	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000034;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000034:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1110389	1110490	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000034;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000034:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1110415	1110490	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000034;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000034:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1110415	1110417	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000034;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19239_ch_T0000034;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110491	1113940	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000034;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000034:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1113941	1114083	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000034;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000034:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1113941	1114083	.	+	2	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000034;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000034:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1114084	1116681	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000034;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000034:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116682	1116805	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000034;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000034:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116682	1116805	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000034;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000034:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1116806	1116921	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000034;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000034:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116922	1117051	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000034;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000034:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116922	1117051	.	+	2	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000034;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000034:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1117052	1118499	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000034;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000034:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1118500	1118672	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000034;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000034:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1118500	1118672	.	+	1	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000034;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000034:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1118673	1122572	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000034;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000034:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1122573	1122706	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000034;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000034:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1122573	1122706	.	+	2	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000034;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000034:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1122707	1124103	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000034;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000034:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1124104	1124133	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000034;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000034:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1124104	1124133	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000034;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000034:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1124134	1130182	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000034;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000034:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1130183	1130318	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000034;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000034:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1130183	1130318	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000034;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000034:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1130319	1135477	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000034;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000034:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135478	1135559	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000034;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000034:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1135478	1135533	.	+	2	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000034;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000034:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1135531	1135533	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000034;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19239_ch_T0000034;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1135560	1139568	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000034;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000034:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1139569	1140102	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000034;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000034:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1094295	1140102	100	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000035;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19239_ch_T0000035;Name=CSF2RA
NA19239_chrY	CAT	exon	1094295	1094360	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000035;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000035:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1094361	1102422	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000035;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000035:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1102423	1102510	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000035;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000035:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1102511	1110388	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000035;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000035:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1110389	1110490	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000035;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000035:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1110415	1110490	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000035;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000035:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1110415	1110417	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000035;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19239_ch_T0000035;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110491	1113940	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000035;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000035:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1113941	1114083	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000035;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000035:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1113941	1114083	.	+	2	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000035;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000035:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1114084	1116681	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000035;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000035:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116682	1116805	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000035;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000035:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116682	1116805	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000035;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000035:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1116806	1116921	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000035;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000035:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116922	1117051	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000035;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000035:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116922	1117051	.	+	2	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000035;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000035:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1117052	1118499	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000035;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000035:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1118500	1118672	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000035;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000035:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1118500	1118672	.	+	1	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000035;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000035:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1118673	1122572	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000035;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000035:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1122573	1122706	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000035;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000035:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1122573	1122706	.	+	2	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000035;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000035:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1122707	1124103	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000035;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000035:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1124104	1124133	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000035;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000035:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1124104	1124133	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000035;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000035:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1124134	1130182	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000035;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000035:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1130183	1130318	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000035;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000035:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1130183	1130318	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000035;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000035:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1130319	1135477	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000035;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000035:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135478	1135559	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000035;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000035:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1135478	1135533	.	+	2	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000035;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000035:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1135531	1135533	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000035;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19239_ch_T0000035;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1135560	1139568	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000035;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000035:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1139569	1140102	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000035;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000035:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1094295	1140102	100	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19239_ch_T0000036;Name=CSF2RA
NA19239_chrY	CAT	exon	1094295	1094360	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000036:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1094361	1102422	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000036:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1102423	1102510	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000036:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1102511	1110388	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000036:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1110389	1110490	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000036:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1110415	1110490	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000036:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1110415	1110417	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19239_ch_T0000036;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110491	1113940	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000036:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1113941	1114083	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000036:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1113941	1114083	.	+	2	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000036:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1114084	1116681	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000036:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116682	1116805	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000036:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116682	1116805	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000036:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1116806	1116921	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000036:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116922	1117051	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000036:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116922	1117051	.	+	2	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000036:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1117052	1118499	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000036:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1118500	1118672	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000036:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1118500	1118672	.	+	1	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000036:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1118673	1122572	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000036:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1122573	1122706	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000036:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1122573	1122706	.	+	2	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000036:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1122707	1124103	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000036:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1124104	1124133	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000036:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1124104	1124133	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000036:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1124134	1130182	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000036:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1130183	1130318	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000036:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1130183	1130318	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000036:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1130319	1133614	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000036:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1133615	1133711	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000036:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1133615	1133711	.	+	2	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000036:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1133712	1135477	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000036:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135478	1135559	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000036:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1135478	1135559	.	+	1	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000036:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1135560	1139568	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000036:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1139569	1140102	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000036:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1139569	1139646	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000036:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1139644	1139646	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000036;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19239_ch_T0000036;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1094295	1135973	100	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19239_ch_T0000037;Name=CSF2RA
NA19239_chrY	CAT	exon	1094295	1094360	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000037:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1094361	1102422	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000037:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1102423	1102486	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000037:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1102487	1110388	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000037:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1110389	1110490	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000037:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1110415	1110490	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000037:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1110415	1110417	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19239_ch_T0000037;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110491	1113940	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000037:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1113941	1114083	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000037:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1113941	1114083	.	+	2	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000037:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1114084	1116681	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000037:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116682	1116805	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000037:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116682	1116805	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000037:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1116806	1116921	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000037:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116922	1117051	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000037:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116922	1117051	.	+	2	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000037:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1117052	1118499	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000037:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1118500	1118672	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000037:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1118500	1118672	.	+	1	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000037:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1118673	1122572	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000037:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1122573	1122706	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000037:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1122573	1122706	.	+	2	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000037:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1122707	1124103	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000037:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1124104	1124133	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000037:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1124104	1124133	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000037:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1124134	1130182	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000037:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1130183	1130318	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000037:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1130183	1130318	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000037:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1130319	1133614	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000037:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1133615	1133711	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000037:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1133615	1133711	.	+	2	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000037:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1133712	1135477	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000037:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135478	1135559	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000037:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1135478	1135559	.	+	1	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000037:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1135560	1135659	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000037:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135660	1135973	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000037:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1135660	1135767	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000037:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1135765	1135767	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000037;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19239_ch_T0000037;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1094295	1140102	100	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19239_ch_T0000038;Name=CSF2RA
NA19239_chrY	CAT	exon	1094295	1094360	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000038:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1094361	1102422	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000038:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1102423	1102486	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000038:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1102487	1110388	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000038:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1110389	1110490	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000038:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1110415	1110490	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000038:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1110415	1110417	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19239_ch_T0000038;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110491	1113940	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000038:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1113941	1114083	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000038:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1113941	1114083	.	+	2	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000038:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1114084	1116681	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000038:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116682	1116805	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000038:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116682	1116805	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000038:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1116806	1116921	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000038:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116922	1117051	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000038:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116922	1117051	.	+	2	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000038:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1117052	1118499	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000038:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1118500	1118672	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000038:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1118500	1118672	.	+	1	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000038:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1118673	1122572	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000038:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1122573	1122706	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000038:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1122573	1122706	.	+	2	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000038:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1122707	1124103	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000038:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1124104	1124133	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000038:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1124104	1124133	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000038:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1124134	1130182	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000038:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1130183	1130318	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000038:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1130183	1130318	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000038:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1130319	1133614	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000038:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1133615	1133711	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000038:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1133615	1133711	.	+	2	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000038:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1133712	1135477	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000038:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135478	1135559	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000038:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1135478	1135559	.	+	1	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000038:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1135560	1139568	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000038:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1139569	1140102	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000038:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1139569	1139646	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000038:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1139644	1139646	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000038;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19239_ch_T0000038;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1094295	1152692	100	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19239_ch_T0000039;Name=CSF2RA
NA19239_chrY	CAT	exon	1094295	1094360	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000039:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1094361	1110388	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000039:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1110389	1110490	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000039:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1110415	1110490	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000039:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1110415	1110417	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19239_ch_T0000039;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110491	1113940	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000039:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1113941	1114083	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000039:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1113941	1114083	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000039:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1114084	1116681	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000039:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116682	1116805	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000039:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116682	1116805	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000039:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1116806	1116921	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000039:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116922	1117051	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000039:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116922	1117051	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000039:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1117052	1118499	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000039:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1118500	1118672	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000039:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1118500	1118672	.	+	1	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000039:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1118673	1122572	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000039:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1122573	1122706	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000039:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1122573	1122706	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000039:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1122707	1124103	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000039:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1124104	1124133	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000039:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1124104	1124133	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000039:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1124134	1130182	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000039:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1130183	1130318	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000039:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1130183	1130318	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000039:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1130319	1133614	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000039:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1133615	1133711	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000039:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1133615	1133711	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000039:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1133712	1135477	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000039:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135478	1135559	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000039:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1135478	1135559	.	+	1	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000039:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1135560	1152491	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000039:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1152492	1152510	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000039:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1152492	1152510	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000039:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1152511	1152598	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000039:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1152599	1152692	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000039:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1152599	1152615	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000039:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1152613	1152615	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000039;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19239_ch_T0000039;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1094295	1152869	100	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19239_ch_T0000040;Name=CSF2RA
NA19239_chrY	CAT	exon	1094295	1094360	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000040:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1094361	1110388	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000040:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1110389	1110490	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000040:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1110415	1110490	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000040:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1110415	1110417	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19239_ch_T0000040;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110491	1113940	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000040:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1113941	1114083	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000040:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1113941	1114083	.	+	2	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000040:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1114084	1116681	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000040:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116682	1116805	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000040:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116682	1116805	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000040:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1116806	1116921	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000040:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116922	1117051	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000040:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116922	1117051	.	+	2	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000040:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1117052	1118499	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000040:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1118500	1118672	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000040:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1118500	1118672	.	+	1	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000040:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1118673	1122572	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000040:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1122573	1122706	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000040:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1122573	1122706	.	+	2	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000040:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1122707	1124103	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000040:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1124104	1124133	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000040:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1124104	1124133	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000040:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1124134	1130182	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000040:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1130183	1130318	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000040:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1130183	1130318	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000040:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1130319	1133614	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000040:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1133615	1133711	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000040:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1133615	1133711	.	+	2	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000040:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1133712	1135477	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000040:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135478	1135559	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000040:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1135478	1135559	.	+	1	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000040:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1135560	1152487	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000040:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1152488	1152510	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000040:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1152488	1152510	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000040:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1152511	1152598	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000040:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1152599	1152869	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000040:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1152599	1152737	.	+	1	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000040:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1152735	1152737	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000040;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19239_ch_T0000040;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1094295	1152869	100	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19239_ch_T0000041;Name=CSF2RA
NA19239_chrY	CAT	exon	1094295	1094360	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000041:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1094361	1102422	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000041:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1102423	1102510	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000041:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1102511	1110388	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000041:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1110389	1110490	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000041:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1110415	1110490	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000041:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1110415	1110417	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19239_ch_T0000041;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110491	1113940	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000041:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1113941	1114083	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000041:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1113941	1114083	.	+	2	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000041:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1114084	1116681	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000041:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116682	1116805	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000041:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116682	1116805	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000041:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1116806	1116921	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000041:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116922	1117051	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000041:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116922	1117051	.	+	2	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000041:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1117052	1118499	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000041:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1118500	1118672	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000041:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1118500	1118672	.	+	1	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000041:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1118673	1122572	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000041:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1122573	1122706	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000041:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1122573	1122706	.	+	2	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000041:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1122707	1124103	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000041:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1124104	1124133	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000041:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1124104	1124133	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000041:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1124134	1130182	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000041:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1130183	1130318	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000041:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1130183	1130318	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000041:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1130319	1133614	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000041:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1133615	1133711	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000041:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1133615	1133711	.	+	2	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000041:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1133712	1135477	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000041:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135478	1135559	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000041:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1135478	1135559	.	+	1	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000041:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1135560	1152487	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000041:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1152488	1152510	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000041:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1152488	1152510	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000041:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1152511	1152598	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000041:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1152599	1152869	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000041:13;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1152599	1152737	.	+	1	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000041:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1152735	1152737	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000041;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19239_ch_T0000041;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1094295	1152869	100	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19239_ch_T0000042;Name=CSF2RA
NA19239_chrY	CAT	exon	1094295	1094360	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000042:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1094361	1102422	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000042:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1102423	1102486	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000042:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1102487	1110388	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000042:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1110389	1110490	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000042:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1110415	1110490	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000042:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1110415	1110417	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19239_ch_T0000042;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110491	1113940	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000042:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1113941	1114083	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000042:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1113941	1114083	.	+	2	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000042:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1114084	1116681	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000042:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116682	1116805	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000042:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116682	1116805	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000042:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1116806	1116921	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000042:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116922	1117051	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000042:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116922	1117051	.	+	2	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000042:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1117052	1118499	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000042:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1118500	1118672	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000042:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1118500	1118672	.	+	1	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000042:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1118673	1122572	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000042:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1122573	1122706	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000042:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1122573	1122706	.	+	2	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000042:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1122707	1124103	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000042:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1124104	1124133	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000042:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1124104	1124133	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000042:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1124134	1130182	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000042:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1130183	1130318	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000042:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1130183	1130318	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000042:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1130319	1133614	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000042:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1133615	1133711	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000042:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1133615	1133711	.	+	2	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000042:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1133712	1135477	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000042:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135478	1135559	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000042:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1135478	1135559	.	+	1	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000042:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1135560	1152487	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000042:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1152488	1152510	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000042:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1152488	1152510	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000042:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1152511	1152598	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000042:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1152599	1152869	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000042:13;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1152599	1152737	.	+	1	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000042:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1152735	1152737	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000042;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19239_ch_T0000042;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1094295	1153151	100	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19239_ch_T0000043;Name=CSF2RA
NA19239_chrY	CAT	exon	1094295	1094360	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000043:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1094361	1102422	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000043:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1102423	1102486	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000043:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1102487	1110388	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000043:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1110389	1110490	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000043:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1110415	1110490	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000043:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1110415	1110417	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19239_ch_T0000043;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110491	1113940	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000043:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1113941	1114083	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000043:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1113941	1114083	.	+	2	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000043:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1114084	1116681	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000043:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116682	1116805	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000043:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116682	1116805	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000043:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1116806	1116921	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000043:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116922	1117051	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000043:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116922	1117051	.	+	2	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000043:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1117052	1118499	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000043:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1118500	1118672	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000043:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1118500	1118672	.	+	1	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000043:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1118673	1122572	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000043:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1122573	1122706	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000043:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1122573	1122706	.	+	2	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000043:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1122707	1124103	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000043:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1124104	1124133	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000043:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1124104	1124133	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000043:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1124134	1130182	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000043:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1130183	1130318	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000043:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1130183	1130318	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000043:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1130319	1133614	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000043:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1133615	1133711	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000043:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1133615	1133711	.	+	2	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000043:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1133712	1135477	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000043:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135478	1135559	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000043:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1135478	1135559	.	+	1	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000043:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1135560	1152491	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000043:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1152492	1153151	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000043:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1152492	1152536	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000043:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1152534	1152536	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000043;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19239_ch_T0000043;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1094295	1153151	100	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19239_ch_T0000044;Name=CSF2RA
NA19239_chrY	CAT	exon	1094295	1094360	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000044:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1094361	1102422	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000044:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1102423	1102510	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000044:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1102511	1110388	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000044:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1110389	1110490	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000044:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1110415	1110490	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000044:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1110415	1110417	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19239_ch_T0000044;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110491	1113940	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000044:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1113941	1114083	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000044:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1113941	1114083	.	+	2	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000044:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1114084	1116681	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000044:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116682	1116805	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000044:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116682	1116805	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000044:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1116806	1116921	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000044:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116922	1117051	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000044:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116922	1117051	.	+	2	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000044:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1117052	1118499	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000044:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1118500	1118672	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000044:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1118500	1118672	.	+	1	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000044:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1118673	1122572	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000044:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1122573	1122706	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000044:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1122573	1122706	.	+	2	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000044:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1122707	1124103	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000044:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1124104	1124133	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000044:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1124104	1124133	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000044:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1124134	1130182	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000044:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1130183	1130318	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000044:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1130183	1130318	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000044:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1130319	1133614	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000044:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1133615	1133711	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000044:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1133615	1133711	.	+	2	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000044:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1133712	1135477	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000044:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135478	1135559	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000044:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1135478	1135559	.	+	1	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000044:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1135560	1152487	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000044:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1152488	1153151	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000044:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1152488	1152514	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000044:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1152512	1152514	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000044;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19239_ch_T0000044;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1094295	1153151	100	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19239_ch_T0000045;Name=CSF2RA
NA19239_chrY	CAT	exon	1094295	1094360	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000045:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1094361	1102422	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000045:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1102423	1102486	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000045:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1102487	1110388	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000045:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1110389	1110490	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000045:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1110415	1110490	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000045:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1110415	1110417	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19239_ch_T0000045;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110491	1113940	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000045:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1113941	1114083	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000045:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1113941	1114083	.	+	2	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000045:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1114084	1116681	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000045:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116682	1116805	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000045:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116682	1116805	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000045:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1116806	1116921	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000045:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116922	1117051	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000045:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116922	1117051	.	+	2	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000045:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1117052	1118499	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000045:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1118500	1118672	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000045:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1118500	1118672	.	+	1	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000045:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1118673	1122572	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000045:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1122573	1122706	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000045:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1122573	1122706	.	+	2	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000045:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1122707	1124103	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000045:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1124104	1124133	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000045:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1124104	1124133	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000045:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1124134	1130182	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000045:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1130183	1130318	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000045:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1130183	1130318	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000045:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1130319	1133614	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000045:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1133615	1133711	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000045:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1133615	1133711	.	+	2	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000045:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1133712	1135477	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000045:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135478	1135559	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000045:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1135478	1135559	.	+	1	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000045:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1135560	1152487	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000045:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1152488	1153151	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000045:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1152488	1152514	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000045:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1152512	1152514	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000045;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19239_ch_T0000045;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1094295	1153151	100	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000046;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19239_ch_T0000046;Name=CSF2RA
NA19239_chrY	CAT	exon	1094295	1094360	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000046;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000046:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1094361	1110388	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000046;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000046:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1110389	1110490	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000046;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000046:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1110415	1110490	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000046;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000046:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1110415	1110417	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000046;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19239_ch_T0000046;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110491	1113940	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000046;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000046:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1113941	1114083	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000046;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000046:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1113941	1114083	.	+	2	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000046;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000046:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1114084	1116681	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000046;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000046:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116682	1116805	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000046;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000046:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116682	1116805	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000046;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000046:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1116806	1116921	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000046;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000046:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116922	1117051	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000046;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000046:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116922	1117051	.	+	2	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000046;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000046:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1117052	1118499	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000046;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000046:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1118500	1118672	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000046;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000046:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1118500	1118672	.	+	1	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000046;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000046:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1118673	1122572	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000046;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000046:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1122573	1122706	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000046;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000046:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1122573	1122706	.	+	2	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000046;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000046:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1122707	1124103	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000046;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000046:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1124104	1124133	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000046;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000046:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1124104	1124133	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000046;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000046:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1124134	1130182	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000046;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000046:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1130183	1130318	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000046;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000046:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1130183	1130318	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000046;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000046:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1130319	1133614	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000046;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000046:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1133615	1133711	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000046;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000046:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1133615	1133711	.	+	2	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000046;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000046:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1133712	1135477	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000046;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000046:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135478	1135559	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000046;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000046:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1135478	1135559	.	+	1	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000046;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000046:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1135560	1152491	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000046;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000046:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1152492	1153151	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000046;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000046:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1152492	1152536	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000046;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000046:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1152534	1152536	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000046;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19239_ch_T0000046;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1094295	1153151	100	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000047;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19239_ch_T0000047;Name=CSF2RA
NA19239_chrY	CAT	exon	1094295	1094360	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000047;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000047:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1094361	1110388	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000047;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000047:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1110389	1110490	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000047;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000047:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1110415	1110490	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000047;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000047:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1110415	1110417	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000047;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19239_ch_T0000047;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110491	1113940	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000047;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000047:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1113941	1114083	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000047;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000047:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1113941	1114083	.	+	2	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000047;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000047:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1114084	1116681	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000047;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000047:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116682	1116805	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000047;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000047:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116682	1116805	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000047;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000047:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1116806	1116921	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000047;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000047:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116922	1117051	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000047;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000047:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116922	1117051	.	+	2	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000047;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000047:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1117052	1118499	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000047;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000047:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1118500	1118672	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000047;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000047:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1118500	1118672	.	+	1	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000047;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000047:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1118673	1122572	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000047;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000047:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1122573	1122706	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000047;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000047:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1122573	1122706	.	+	2	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000047;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000047:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1122707	1124103	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000047;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000047:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1124104	1124133	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000047;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000047:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1124104	1124133	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000047;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000047:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1124134	1130182	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000047;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000047:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1130183	1130318	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000047;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000047:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1130183	1130318	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000047;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000047:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1130319	1135477	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000047;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000047:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135478	1135559	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000047;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000047:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1135478	1135533	.	+	2	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000047;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000047:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1135531	1135533	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000047;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19239_ch_T0000047;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1135560	1152487	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000047;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000047:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1152488	1153151	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000047;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000047:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1094295	1140102	100	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000048;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19239_ch_T0000048;Name=CSF2RA
NA19239_chrY	CAT	exon	1094295	1094360	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000048;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000048:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1094361	1102422	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000048;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000048:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1102423	1102510	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000048;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000048:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1102511	1110388	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000048;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000048:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1110389	1110490	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000048;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000048:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1110415	1110490	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000048;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000048:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1110415	1110417	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000048;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19239_ch_T0000048;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110491	1113940	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000048;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000048:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1113941	1114083	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000048;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000048:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1113941	1114083	.	+	2	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000048;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000048:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1114084	1116681	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000048;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000048:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116682	1116805	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000048;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000048:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116682	1116805	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000048;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000048:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1116806	1116921	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000048;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000048:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116922	1117051	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000048;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000048:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116922	1117051	.	+	2	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000048;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000048:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1117052	1118499	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000048;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000048:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1118500	1118672	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000048;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000048:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1118500	1118672	.	+	1	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000048;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000048:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1118673	1122572	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000048;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000048:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1122573	1122706	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000048;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000048:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1122573	1122706	.	+	2	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000048;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000048:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1122707	1124103	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000048;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000048:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1124104	1124133	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000048;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000048:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1124104	1124133	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000048;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000048:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1124134	1130182	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000048;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000048:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1130183	1130318	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000048;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000048:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1130183	1130318	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000048;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000048:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1130319	1139568	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000048;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000048:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1139569	1140102	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000048;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000048:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1139569	1139756	.	+	2	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000048;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000048:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1139754	1139756	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000048;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19239_ch_T0000048;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1094295	1153151	100	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19239_ch_T0000049;Name=CSF2RA
NA19239_chrY	CAT	exon	1094295	1094360	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000049:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1094361	1102422	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000049:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1102423	1102510	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000049:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1102511	1110388	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000049:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1110389	1110490	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000049:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1110415	1110490	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000049:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1110415	1110417	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19239_ch_T0000049;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110491	1113940	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000049:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1113941	1114083	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000049:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1113941	1114083	.	+	2	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000049:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1114084	1116681	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000049:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116682	1116805	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000049:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116682	1116805	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000049:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1116806	1116921	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000049:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116922	1117051	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000049:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116922	1117051	.	+	2	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000049:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1117052	1118499	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000049:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1118500	1118672	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000049:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1118500	1118672	.	+	1	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000049:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1118673	1122572	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000049:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1122573	1122706	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000049:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1122573	1122706	.	+	2	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000049:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1122707	1124103	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000049:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1124104	1124133	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000049:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1124104	1124133	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000049:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1124134	1130182	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000049:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1130183	1130318	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000049:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1130183	1130318	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000049:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1130319	1133614	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000049:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1133615	1133711	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000049:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1133615	1133711	.	+	2	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000049:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1133712	1135477	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000049:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135478	1135559	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000049:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1135478	1135559	.	+	1	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000049:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1135560	1152491	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000049:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1152492	1153151	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000049:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1152492	1152536	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000049:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1152534	1152536	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000049;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19239_ch_T0000049;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1094295	1153151	100	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000050;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19239_ch_T0000050;Name=CSF2RA
NA19239_chrY	CAT	exon	1094295	1094360	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000050;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000050:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1094361	1110388	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000050;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000050:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1110389	1110490	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000050;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000050:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1110415	1110490	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000050;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000050:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1110415	1110417	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000050;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19239_ch_T0000050;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110491	1113940	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000050;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000050:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1113941	1114083	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000050;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000050:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1113941	1114083	.	+	2	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000050;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000050:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1114084	1116681	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000050;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000050:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116682	1116805	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000050;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000050:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116682	1116805	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000050;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000050:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1116806	1116921	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000050;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000050:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116922	1117051	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000050;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000050:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116922	1117051	.	+	2	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000050;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000050:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1117052	1118499	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000050;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000050:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1118500	1118672	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000050;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000050:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1118500	1118672	.	+	1	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000050;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000050:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1118673	1122572	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000050;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000050:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1122573	1122706	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000050;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000050:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1122573	1122706	.	+	2	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000050;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000050:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1122707	1124103	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000050;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000050:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1124104	1124133	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000050;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000050:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1124104	1124133	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000050;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000050:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1124134	1130182	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000050;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000050:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1130183	1130318	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000050;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000050:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1130183	1130318	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000050;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000050:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1130319	1135477	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000050;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000050:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135478	1135559	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000050;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000050:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1135478	1135533	.	+	2	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000050;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000050:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1135531	1135533	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000050;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19239_ch_T0000050;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1135560	1152491	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000050;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000050:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1152492	1153151	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000050;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000050:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1094295	1155245	100	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19239_ch_T0000051;Name=CSF2RA
NA19239_chrY	CAT	exon	1094295	1094360	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000051:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1094361	1102422	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000051:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1102423	1102486	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000051:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1102487	1110388	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000051:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1110389	1110490	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000051:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1110415	1110490	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000051:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1110415	1110417	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19239_ch_T0000051;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110491	1113940	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000051:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1113941	1114083	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000051:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1113941	1114083	.	+	2	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000051:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1114084	1116681	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000051:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116682	1116805	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000051:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116682	1116805	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000051:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1116806	1116921	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000051:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116922	1117051	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000051:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116922	1117051	.	+	2	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000051:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1117052	1118499	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000051:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1118500	1118672	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000051:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1118500	1118672	.	+	1	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000051:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1118673	1122572	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000051:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1122573	1122706	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000051:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1122573	1122706	.	+	2	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000051:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1122707	1124103	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000051:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1124104	1124133	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000051:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1124104	1124133	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000051:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1124134	1130182	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000051:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1130183	1130318	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000051:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1130183	1130318	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000051:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1130319	1133614	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000051:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1133615	1133711	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000051:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1133615	1133711	.	+	2	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000051:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1133712	1135477	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000051:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135478	1135559	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000051:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1135478	1135559	.	+	1	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000051:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1135560	1142431	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000051:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1142432	1142538	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000051:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1142432	1142500	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000051:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1142498	1142500	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19239_ch_T0000051;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1142539	1155054	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000051:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1155055	1155245	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000051;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000051:13;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1094295	1155245	100	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000052;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19239_ch_T0000052;Name=CSF2RA
NA19239_chrY	CAT	exon	1094295	1094360	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000052;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000052:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1094361	1110388	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000052;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000052:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1110389	1110490	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000052;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000052:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1110415	1110490	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000052;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000052:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1110415	1110417	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000052;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19239_ch_T0000052;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110491	1113940	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000052;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000052:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1113941	1114083	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000052;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000052:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1113941	1114083	.	+	2	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000052;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000052:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1114084	1116681	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000052;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000052:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116682	1116805	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000052;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000052:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116682	1116805	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000052;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000052:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1116806	1116921	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000052;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000052:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116922	1117051	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000052;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000052:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116922	1117051	.	+	2	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000052;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000052:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1117052	1118499	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000052;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000052:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1118500	1118672	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000052;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000052:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1118500	1118672	.	+	1	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000052;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000052:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1118673	1122572	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000052;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000052:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1122573	1122706	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000052;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000052:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1122573	1122706	.	+	2	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000052;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000052:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1122707	1124103	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000052;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000052:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1124104	1124133	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000052;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000052:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1124104	1124133	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000052;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000052:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1124134	1130182	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000052;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000052:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1130183	1130318	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000052;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000052:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1130183	1130318	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000052;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000052:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1130319	1133614	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000052;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000052:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1133615	1133711	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000052;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000052:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1133615	1133711	.	+	2	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000052;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000052:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1133712	1135477	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000052;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000052:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135478	1135559	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000052;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000052:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1135478	1135559	.	+	1	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000052;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000052:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1135560	1155054	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000052;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000052:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1155055	1155245	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000052;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000052:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1155055	1155090	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000052;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000052:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1155088	1155090	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000052;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19239_ch_T0000052;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1094295	1155245	100	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19239_ch_T0000053;Name=CSF2RA
NA19239_chrY	CAT	exon	1094295	1094360	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000053:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1094361	1102422	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000053:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1102423	1102510	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000053:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1102511	1110388	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000053:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1110389	1110490	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000053:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1110415	1110490	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000053:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1110415	1110417	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19239_ch_T0000053;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110491	1113940	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000053:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1113941	1114083	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000053:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1113941	1114083	.	+	2	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000053:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1114084	1116681	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000053:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116682	1116805	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000053:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116682	1116805	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000053:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1116806	1116921	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000053:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116922	1117051	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000053:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116922	1117051	.	+	2	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000053:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1117052	1118499	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000053:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1118500	1118672	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000053:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1118500	1118672	.	+	1	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000053:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1118673	1122572	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000053:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1122573	1122706	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000053:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1122573	1122706	.	+	2	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000053:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1122707	1124103	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000053:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1124104	1124133	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000053:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1124104	1124133	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000053:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1124134	1130182	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000053:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1130183	1130318	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000053:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1130183	1130318	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000053:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1130319	1133614	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000053:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1133615	1133711	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000053:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1133615	1133711	.	+	2	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000053:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1133712	1135477	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000053:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135478	1135559	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000053:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1135478	1135559	.	+	1	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000053:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1135560	1155054	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000053:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1155055	1155245	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000053:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1155055	1155090	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000053:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1155088	1155090	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000053;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19239_ch_T0000053;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1094295	1155245	100	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000054;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19239_ch_T0000054;Name=CSF2RA
NA19239_chrY	CAT	exon	1094295	1094360	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000054;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000054:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1094361	1110388	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000054;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000054:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1110389	1110490	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000054;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000054:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1110415	1110490	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000054;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000054:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1110415	1110417	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000054;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19239_ch_T0000054;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110491	1113940	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000054;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000054:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1113941	1114083	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000054;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000054:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1113941	1114083	.	+	2	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000054;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000054:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1114084	1116681	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000054;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000054:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116682	1116805	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000054;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000054:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116682	1116805	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000054;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000054:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1116806	1116921	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000054;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000054:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116922	1117051	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000054;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000054:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116922	1117051	.	+	2	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000054;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000054:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1117052	1118499	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000054;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000054:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1118500	1118672	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000054;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000054:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1118500	1118672	.	+	1	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000054;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000054:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1118673	1122572	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000054;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000054:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1122573	1122706	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000054;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000054:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1122573	1122706	.	+	2	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000054;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000054:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1122707	1124103	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000054;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000054:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1124104	1124133	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000054;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000054:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1124104	1124133	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000054;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000054:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1124134	1130182	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000054;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000054:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1130183	1130318	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000054;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000054:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1130183	1130318	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000054;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000054:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1130319	1135477	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000054;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000054:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135478	1135559	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000054;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000054:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1135478	1135533	.	+	2	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000054;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000054:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1135531	1135533	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000054;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19239_ch_T0000054;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1135560	1155054	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000054;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000054:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1155055	1155245	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000054;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000054:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1094295	1155245	100	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19239_ch_T0000055;Name=CSF2RA
NA19239_chrY	CAT	exon	1094295	1094360	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000055:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1094361	1102422	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000055:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1102423	1102486	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000055:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1102487	1110388	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000055:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1110389	1110490	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000055:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1110415	1110490	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000055:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1110415	1110417	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19239_ch_T0000055;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110491	1113940	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000055:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1113941	1114083	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000055:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1113941	1114083	.	+	2	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000055:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1114084	1116681	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000055:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116682	1116805	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000055:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116682	1116805	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000055:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1116806	1116921	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000055:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116922	1117051	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000055:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116922	1117051	.	+	2	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000055:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1117052	1118499	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000055:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1118500	1118672	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000055:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1118500	1118672	.	+	1	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000055:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1118673	1122572	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000055:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1122573	1122706	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000055:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1122573	1122706	.	+	2	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000055:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1122707	1124103	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000055:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1124104	1124133	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000055:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1124104	1124133	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000055:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1124134	1130182	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000055:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1130183	1130318	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000055:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1130183	1130318	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000055:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1130319	1133614	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000055:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1133615	1133711	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000055:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1133615	1133711	.	+	2	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000055:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1133712	1135477	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000055:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135478	1135559	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000055:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1135478	1135559	.	+	1	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000055:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1135560	1155054	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000055:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1155055	1155245	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000055:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1155055	1155090	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000055:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1155088	1155090	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000055;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19239_ch_T0000055;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1094295	1140102	100	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000056;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19239_ch_T0000056;Name=CSF2RA
NA19239_chrY	CAT	exon	1094295	1094360	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000056;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000056:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1094361	1102422	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000056;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000056:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1102423	1102486	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000056;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000056:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1102487	1110388	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000056;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000056:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1110389	1110490	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000056;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000056:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1110415	1110490	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000056;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000056:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1110415	1110417	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000056;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19239_ch_T0000056;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110491	1113940	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000056;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000056:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1113941	1114083	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000056;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000056:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1113941	1114083	.	+	2	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000056;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000056:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1114084	1116681	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000056;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000056:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116682	1116805	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000056;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000056:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116682	1116805	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000056;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000056:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1116806	1116921	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000056;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000056:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116922	1117051	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000056;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000056:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116922	1117051	.	+	2	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000056;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000056:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1117052	1118499	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000056;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000056:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1118500	1118672	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000056;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000056:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1118500	1118672	.	+	1	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000056;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000056:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1118673	1122572	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000056;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000056:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1122573	1122706	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000056;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000056:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1122573	1122706	.	+	2	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000056;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000056:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1122707	1124103	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000056;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000056:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1124104	1124133	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000056;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000056:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1124104	1124133	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000056;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000056:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1124134	1130182	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000056;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000056:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1130183	1130318	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000056;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000056:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1130183	1130318	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000056;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000056:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1130319	1135477	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000056;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000056:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135478	1135559	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000056;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000056:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1135478	1135533	.	+	2	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000056;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000056:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1135531	1135533	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000056;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19239_ch_T0000056;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1135560	1139568	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000056;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000056:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1139569	1140102	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000056;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000056:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1094295	1140102	100	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000057;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19239_ch_T0000057;Name=CSF2RA
NA19239_chrY	CAT	exon	1094295	1094360	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000057;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000057:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1094361	1102422	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000057;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000057:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1102423	1102510	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000057;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000057:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1102511	1110388	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000057;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000057:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1110389	1110490	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000057;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000057:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1110415	1110490	.	+	0	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000057;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000057:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1110415	1110417	.	+	0	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000057;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19239_ch_T0000057;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110491	1113940	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000057;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000057:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1113941	1114083	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000057;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000057:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1113941	1114083	.	+	2	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000057;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000057:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1114084	1116681	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000057;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000057:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116682	1116805	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000057;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000057:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116682	1116805	.	+	0	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000057;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000057:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1116806	1116921	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000057;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000057:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116922	1117051	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000057;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000057:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116922	1117051	.	+	2	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000057;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000057:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1117052	1118499	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000057;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000057:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1118500	1118672	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000057;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000057:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1118500	1118672	.	+	1	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000057;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000057:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1118673	1135477	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000057;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000057:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135478	1135559	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000057;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000057:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1135478	1135533	.	+	2	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000057;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000057:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1135531	1135533	.	+	0	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000057;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19239_ch_T0000057;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1135560	1139568	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000057;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000057:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1139569	1140102	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000057;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000057:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1094295	1140102	100	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19239_ch_T0000058;Name=CSF2RA
NA19239_chrY	CAT	exon	1094295	1094360	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000058:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1094361	1102422	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000058:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1102423	1102486	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000058:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1102487	1110119	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000058:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1110120	1110271	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000058:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110272	1110388	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000058:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1110389	1110490	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000058:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1110415	1110490	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000058:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1110415	1110417	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19239_ch_T0000058;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110491	1113940	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000058:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1113941	1114083	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000058:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1113941	1114083	.	+	2	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000058:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1114084	1116681	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000058:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116682	1116805	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000058:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116682	1116805	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000058:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1116806	1116921	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000058:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116922	1117051	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000058:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116922	1117051	.	+	2	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000058:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1117052	1118499	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000058:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1118500	1118672	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000058:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1118500	1118672	.	+	1	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000058:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1118673	1122572	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000058:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1122573	1122706	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000058:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1122573	1122706	.	+	2	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000058:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1122707	1124103	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000058:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1124104	1124133	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000058:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1124104	1124133	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000058:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1124134	1130182	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000058:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1130183	1130318	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000058:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1130183	1130318	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000058:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1130319	1133614	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000058:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1133615	1133711	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000058:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1133615	1133711	.	+	2	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000058:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1133712	1135477	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000058:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135478	1135559	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000058:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1135478	1135559	.	+	1	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000058:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1135560	1139568	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000058:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1139569	1140102	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000058:13;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1139569	1139646	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000058:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1139644	1139646	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000058;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19239_ch_T0000058;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1094295	1140102	100	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19239_ch_T0000059;Name=CSF2RA
NA19239_chrY	CAT	exon	1094295	1094360	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000059:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1094361	1102422	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000059:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1102423	1102486	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000059:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1102487	1110388	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000059:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1110389	1110490	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000059:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1110415	1110490	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000059:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1110415	1110417	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19239_ch_T0000059;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110491	1113940	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000059:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1113941	1114083	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000059:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1113941	1114083	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000059:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1114084	1116681	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000059:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116682	1116805	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000059:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116682	1116805	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000059:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1116806	1116921	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000059:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116922	1117051	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000059:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116922	1117051	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000059:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1117052	1118499	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000059:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1118500	1118672	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000059:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1118500	1118672	.	+	1	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000059:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1118673	1122572	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000059:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1122573	1122706	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000059:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1122573	1122706	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000059:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1122707	1124103	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000059:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1124104	1124133	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000059:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1124104	1124133	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000059:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1124134	1130182	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000059:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1130183	1130318	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000059:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1130183	1130318	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000059:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1130319	1132952	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000059:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1132953	1133054	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000059:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1132953	1133054	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000059:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1133055	1133614	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000059:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1133615	1133711	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000059:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1133615	1133711	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000059:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1133712	1135477	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000059:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135478	1135559	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000059:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1135478	1135559	.	+	1	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000059:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1135560	1139568	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000059:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1139569	1140102	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000059:13;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1139569	1139646	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000059:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1139644	1139646	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000059;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19239_ch_T0000059;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1094295	1140102	100	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000060;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19239_ch_T0000060;Name=CSF2RA
NA19239_chrY	CAT	exon	1094295	1094360	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000060;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000060:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1094361	1110388	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000060;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000060:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1110389	1110490	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000060;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000060:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110491	1116681	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000060;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000060:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116682	1116805	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000060;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000060:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1116806	1116921	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000060;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000060:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116922	1117051	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000060;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000060:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116978	1117051	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000060;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000060:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1116978	1116980	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000060;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19239_ch_T0000060;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1117052	1118499	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000060;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000060:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1118500	1118672	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000060;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000060:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1118500	1118672	.	+	1	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000060;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000060:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1118673	1122572	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000060;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000060:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1122573	1122706	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000060;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000060:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1122573	1122706	.	+	2	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000060;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000060:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1122707	1124103	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000060;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000060:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1124104	1124133	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000060;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000060:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1124104	1124133	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000060;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000060:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1124134	1130182	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000060;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000060:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1130183	1130318	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000060;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000060:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1130183	1130318	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000060;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000060:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1130319	1133614	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000060;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000060:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1133615	1133711	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000060;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000060:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1133615	1133711	.	+	2	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000060;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000060:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1133712	1135477	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000060;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000060:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135478	1135559	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000060;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000060:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1135478	1135559	.	+	1	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000060;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000060:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1135560	1139568	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000060;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000060:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1139569	1140102	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000060;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000060:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1139569	1139646	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000060;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000060:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1139644	1139646	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000060;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19239_ch_T0000060;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1094295	1140102	1000	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000061;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_G0000009;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=NA19239_ch_T0000061;Name=CSF2RA
NA19239_chrY	CAT	exon	1094295	1094360	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000061;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000061;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000061:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1094361	1102422	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000061;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000061;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000061:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1102423	1102510	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000061;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000061;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000061:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1102511	1110388	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000061;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000061;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000061:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1110389	1110490	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000061;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000061;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000061:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110491	1113940	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000061;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000061;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000061:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1113941	1114083	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000061;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000061;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000061:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1114084	1116681	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000061;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000061;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000061:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116682	1116805	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000061;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000061;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000061:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1116806	1116921	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000061;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000061;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000061:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116922	1117051	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000061;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000061;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000061:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1117052	1118499	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000061;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000061;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000061:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1118500	1118672	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000061;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000061;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000061:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1118673	1122572	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000061;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000061;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000061:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1122573	1122706	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000061;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000061;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000061:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1122707	1124103	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000061;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000061;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000061:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1124104	1124133	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000061;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000061;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000061:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1124134	1133614	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000061;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000061;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000061:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1133615	1133711	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000061;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000061;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000061:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1133712	1135477	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000061;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000061;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000061:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135478	1135559	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000061;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000061;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000061:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1135560	1139568	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000061;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000061;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000061:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1139569	1140102	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000061;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000061;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000061:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1109947	1152869	100	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19239_ch_T0000062;Name=CSF2RA
NA19239_chrY	CAT	exon	1109947	1110271	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000062:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110272	1110388	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000062:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1110389	1110490	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000062:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1110415	1110490	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000062:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1110415	1110417	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19239_ch_T0000062;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110491	1113940	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000062:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1113941	1114083	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000062:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1113941	1114083	.	+	2	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000062:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1114084	1116681	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000062:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116682	1116805	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000062:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116682	1116805	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000062:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1116806	1116921	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000062:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116922	1117051	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000062:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116922	1117051	.	+	2	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000062:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1117052	1118499	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000062:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1118500	1118672	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000062:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1118500	1118672	.	+	1	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000062:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1118673	1122572	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000062:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1122573	1122706	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000062:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1122573	1122706	.	+	2	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000062:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1122707	1124103	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000062:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1124104	1124133	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000062:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1124104	1124133	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000062:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1124134	1130182	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000062:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1130183	1130318	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000062:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1130183	1130318	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000062:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1130319	1133614	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000062:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1133615	1133711	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000062:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1133615	1133711	.	+	2	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000062:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1133712	1135477	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000062:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135478	1135559	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000062:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1135478	1135559	.	+	1	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000062:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1135560	1152487	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000062:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1152488	1152510	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000062:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1152488	1152510	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000062:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1152511	1152598	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000062:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1152599	1152869	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000062:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1152599	1152737	.	+	1	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000062:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1152735	1152737	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000062;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19239_ch_T0000062;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1110514	1152873	100	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000063;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19239_ch_T0000063;Name=CSF2RA
NA19239_chrY	CAT	exon	1110514	1110753	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000063;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000063:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1110754	1113940	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000063;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000063:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1113941	1114083	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000063;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000063:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1113997	1114083	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000063;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000063:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1113997	1113999	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000063;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19239_ch_T0000063;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1114084	1116681	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000063;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000063:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116682	1116805	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000063;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000063:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116682	1116805	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000063;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000063:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1116806	1116921	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000063;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000063:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1116922	1117051	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000063;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000063:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1116922	1117051	.	+	2	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000063;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000063:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1117052	1118499	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000063;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000063:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1118500	1118672	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000063;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000063:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1118500	1118672	.	+	1	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000063;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000063:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1118673	1122572	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000063;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000063:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1122573	1122706	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000063;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000063:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1122573	1122706	.	+	2	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000063;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000063:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1122707	1124103	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000063;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000063:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1124104	1124133	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000063;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000063:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1124104	1124133	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000063;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000063:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1124134	1130182	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000063;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000063:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1130183	1130318	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000063;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000063:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1130183	1130318	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000063;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000063:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1130319	1133614	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000063;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000063:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1133615	1133711	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000063;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000063:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1133615	1133711	.	+	2	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000063;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000063:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1133712	1135477	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000063;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000063:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1135478	1135559	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000063;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000063:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1135478	1135559	.	+	1	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000063;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000063:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1135560	1152487	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000063;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000063:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1152488	1152510	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000063;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000063:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1152488	1152510	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000063;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000063:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1152511	1152598	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000063;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19239_ch_T0000063:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1152599	1152873	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000063;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19239_ch_T0000063:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1152599	1152737	.	+	1	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000063;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19239_ch_T0000063:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1152735	1152737	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000063;gene_id=NA19239_ch_G0000009;Parent=NA19239_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19239_ch_T0000063;Name=CSF2RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	1121702	1122154	.	-	.	source_gene_common_name=LOC124905238;source_gene=hg002_chrY_paternal_15;alternative_source_transcripts=hg002_chrY_paternal_15.1;gene_id=NA19239_ch_G0000010;gene_biotype=lncRNA;gene_name=LOC124905238;gene_sources=liftoff,transMap;ID=NA19239_ch_G0000010;Name=LOC124905238
NA19239_chrY	CAT	transcript	1121702	1122154	1000	-	.	source_transcript=hg002_chrY_paternal_15.1;source_transcript_name=hg002_chrY_paternal_15.1;source_gene=hg002_chrY_paternal_15;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_15;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_15.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_15.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905238;alternative_source_transcripts=hg002_chrY_paternal_15.1;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000064;gene_id=NA19239_ch_G0000010;Parent=NA19239_ch_G0000010;transcript_name=hg002_chrY_paternal_15.1;gene_name=LOC124905238;ID=NA19239_ch_T0000064;Name=LOC124905238
NA19239_chrY	CAT	exon	1121702	1121738	.	-	.	source_transcript=hg002_chrY_paternal_15.1;source_transcript_name=hg002_chrY_paternal_15.1;source_gene=hg002_chrY_paternal_15;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_15;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_15.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_15.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905238;alternative_source_transcripts=hg002_chrY_paternal_15.1;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000064;gene_id=NA19239_ch_G0000010;Parent=NA19239_ch_T0000064;transcript_name=hg002_chrY_paternal_15.1;gene_name=LOC124905238;ID=exon:NA19239_ch_T0000064:0;Name=LOC124905238;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1121739	1121998	.	-	.	source_transcript=hg002_chrY_paternal_15.1;source_transcript_name=hg002_chrY_paternal_15.1;source_gene=hg002_chrY_paternal_15;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_15;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_15.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_15.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905238;alternative_source_transcripts=hg002_chrY_paternal_15.1;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000064;gene_id=NA19239_ch_G0000010;Parent=NA19239_ch_T0000064;transcript_name=hg002_chrY_paternal_15.1;gene_name=LOC124905238;ID=intron:NA19239_ch_T0000064:0;Name=LOC124905238;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1121999	1122154	.	-	.	source_transcript=hg002_chrY_paternal_15.1;source_transcript_name=hg002_chrY_paternal_15.1;source_gene=hg002_chrY_paternal_15;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_15;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_15.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_15.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905238;alternative_source_transcripts=hg002_chrY_paternal_15.1;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000064;gene_id=NA19239_ch_G0000010;Parent=NA19239_ch_T0000064;transcript_name=hg002_chrY_paternal_15.1;gene_name=LOC124905238;ID=exon:NA19239_ch_T0000064:1;Name=LOC124905238;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	1121771	1121802	.	+	.	source_gene_common_name=MIR3690;source_gene=hg002_chrY_paternal_16;alternative_source_transcripts=hg002_chrY_paternal_16.1,hg002_chrY_paternal_16.1;gene_id=NA19239_ch_G0000011;gene_biotype=miRNA;gene_name=MIR3690;gene_sources=liftoff;ID=NA19239_ch_G0000011;Name=MIR3690
NA19239_chrY	CAT	transcript	1121771	1121845	1000	+	.	source_transcript=hg002_chrY_paternal_16.1;source_transcript_name=hg002_chrY_paternal_16.1;source_gene=hg002_chrY_paternal_16;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_16;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_16.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_16.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_16.1,hg002_chrY_paternal_16.1;transcript_id=NA19239_ch_T0000065;gene_id=NA19239_ch_G0000011;Parent=NA19239_ch_G0000011;transcript_name=hg002_chrY_paternal_16.1;gene_name=MIR3690;ID=NA19239_ch_T0000065;Name=MIR3690
NA19239_chrY	CAT	exon	1121771	1121845	.	+	.	source_transcript=hg002_chrY_paternal_16.1;source_transcript_name=hg002_chrY_paternal_16.1;source_gene=hg002_chrY_paternal_16;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_16;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_16.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_16.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_16.1,hg002_chrY_paternal_16.1;transcript_id=NA19239_ch_T0000065;gene_id=NA19239_ch_G0000011;Parent=NA19239_ch_T0000065;transcript_name=hg002_chrY_paternal_16.1;gene_name=MIR3690;ID=exon:NA19239_ch_T0000065:0;Name=MIR3690;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1121780	1121802	1000	+	.	source_transcript=hg002_chrY_paternal_16.2;source_transcript_name=hg002_chrY_paternal_16.1;source_gene=hg002_chrY_paternal_16;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_16;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_16.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_16.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_16.2,hg002_chrY_paternal_16.2;transcript_id=NA19239_ch_T0000066;gene_id=NA19239_ch_G0000011;Parent=NA19239_ch_G0000011;transcript_name=hg002_chrY_paternal_16.1;gene_name=MIR3690;ID=NA19239_ch_T0000066;Name=MIR3690
NA19239_chrY	CAT	exon	1121780	1121802	.	+	.	source_transcript=hg002_chrY_paternal_16.2;source_transcript_name=hg002_chrY_paternal_16.1;source_gene=hg002_chrY_paternal_16;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_16;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_16.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_16.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_16.2,hg002_chrY_paternal_16.2;transcript_id=NA19239_ch_T0000066;gene_id=NA19239_ch_G0000011;Parent=NA19239_ch_T0000066;transcript_name=hg002_chrY_paternal_16.1;gene_name=MIR3690;ID=exon:NA19239_ch_T0000066:0;Name=MIR3690;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	1122074	1122105	.	+	.	source_gene_common_name=MIR3690;source_gene=hg002_chrY_paternal_18;alternative_source_transcripts=hg002_chrY_paternal_17.1,hg002_chrY_paternal_17.1;gene_id=NA19239_ch_G0000012;gene_biotype=miRNA;gene_name=MIR3690;gene_sources=liftoff;ID=NA19239_ch_G0000012;Name=MIR3690
NA19239_chrY	CAT	transcript	1122074	1122148	1000	+	.	source_transcript=hg002_chrY_paternal_18.1;source_transcript_name=hg002_chrY_paternal_18.1;source_gene=hg002_chrY_paternal_18;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_18;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_18.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_18.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_17.1,hg002_chrY_paternal_17.1;transcript_id=NA19239_ch_T0000067;gene_id=NA19239_ch_G0000012;Parent=NA19239_ch_G0000012;transcript_name=hg002_chrY_paternal_18.1;gene_name=MIR3690;ID=NA19239_ch_T0000067;Name=MIR3690
NA19239_chrY	CAT	exon	1122074	1122148	.	+	.	source_transcript=hg002_chrY_paternal_18.1;source_transcript_name=hg002_chrY_paternal_18.1;source_gene=hg002_chrY_paternal_18;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_18;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_18.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_18.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_17.1,hg002_chrY_paternal_17.1;transcript_id=NA19239_ch_T0000067;gene_id=NA19239_ch_G0000012;Parent=NA19239_ch_T0000067;transcript_name=hg002_chrY_paternal_18.1;gene_name=MIR3690;ID=exon:NA19239_ch_T0000067:0;Name=MIR3690;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1122083	1122105	1000	+	.	source_transcript=hg002_chrY_paternal_18.2;source_transcript_name=hg002_chrY_paternal_18.1;source_gene=hg002_chrY_paternal_18;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_18;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_18.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_18.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_17.2,hg002_chrY_paternal_17.2;transcript_id=NA19239_ch_T0000068;gene_id=NA19239_ch_G0000012;Parent=NA19239_ch_G0000012;transcript_name=hg002_chrY_paternal_18.1;gene_name=MIR3690;ID=NA19239_ch_T0000068;Name=MIR3690
NA19239_chrY	CAT	exon	1122083	1122105	.	+	.	source_transcript=hg002_chrY_paternal_18.2;source_transcript_name=hg002_chrY_paternal_18.1;source_gene=hg002_chrY_paternal_18;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_18;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_18.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_18.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_17.2,hg002_chrY_paternal_17.2;transcript_id=NA19239_ch_T0000068;gene_id=NA19239_ch_G0000012;Parent=NA19239_ch_T0000068;transcript_name=hg002_chrY_paternal_18.1;gene_name=MIR3690;ID=exon:NA19239_ch_T0000068:0;Name=MIR3690;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	1173111	1212308	.	+	.	source_gene_common_name=IL3RA;source_gene=hg002_chrY_paternal_20;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;gene_id=NA19239_ch_G0000013;gene_biotype=protein_coding;gene_name=IL3RA;gene_sources=liftoff,augTM;ID=NA19239_ch_G0000013;Name=IL3RA
NA19239_chrY	CAT	transcript	1173111	1212308	100	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000069;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=NA19239_ch_T0000069;Name=IL3RA
NA19239_chrY	CAT	exon	1173111	1173252	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000069;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000069:0;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1173253	1178053	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000069;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000069:0;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1178054	1178155	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000069;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000069:1;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1178092	1178155	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000069;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000069:0;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1178092	1178094	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000069;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:NA19239_ch_T0000069;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1178156	1188431	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000069;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000069:1;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1188432	1188564	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000069;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000069:2;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1188432	1188564	.	+	2	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000069;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000069:1;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1188565	1188653	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000069;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000069:2;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1188654	1188838	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000069;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000069:3;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1188654	1188838	.	+	1	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000069;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000069:2;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1188839	1192510	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000069;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000069:3;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1192511	1192626	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000069;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000069:4;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1192511	1192626	.	+	2	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000069;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000069:3;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1192627	1195150	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000069;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000069:4;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1195151	1195177	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000069;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000069:5;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1195151	1195177	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000069;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000069:4;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1195178	1201410	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000069;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000069:5;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1201411	1201525	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000069;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000069:6;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1201411	1201525	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000069;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000069:5;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1201526	1208216	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000069;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000069:6;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1208217	1208322	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000069;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000069:7;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1208217	1208322	.	+	2	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000069;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000069:6;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1208323	1210600	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000069;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000069:7;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1210601	1210682	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000069;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000069:8;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1210601	1210682	.	+	1	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000069;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000069:7;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1210683	1212008	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000069;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000069:8;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1212009	1212308	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000069;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000069:9;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1212009	1212083	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000069;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000069:8;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1212081	1212083	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000069;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000069;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:NA19239_ch_T0000069;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1173111	1212308	100	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000070;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=NA19239_ch_T0000070;Name=IL3RA
NA19239_chrY	CAT	exon	1173111	1173252	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000070;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000070:0;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1173253	1178053	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000070;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000070:0;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1178054	1178155	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000070;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000070:1;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1178092	1178155	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000070;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000070:0;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1178092	1178094	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000070;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:NA19239_ch_T0000070;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1178156	1181644	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000070;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000070:1;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1181645	1181763	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000070;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000070:2;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1181645	1181763	.	+	2	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000070;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000070:1;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1181764	1184759	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000070;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000070:2;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1184760	1184874	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000070;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000070:3;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1184760	1184874	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000070;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000070:2;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1184875	1188431	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000070;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000070:3;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1188432	1188564	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000070;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000070:4;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1188432	1188564	.	+	2	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000070;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000070:3;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1188565	1188653	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000070;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000070:4;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1188654	1188838	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000070;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000070:5;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1188654	1188838	.	+	1	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000070;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000070:4;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1188839	1192510	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000070;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000070:5;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1192511	1192626	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000070;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000070:6;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1192511	1192626	.	+	2	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000070;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000070:5;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1192627	1195150	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000070;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000070:6;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1195151	1195177	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000070;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000070:7;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1195151	1195177	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000070;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000070:6;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1195178	1201410	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000070;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000070:7;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1201411	1201525	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000070;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000070:8;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1201411	1201525	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000070;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000070:7;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1201526	1208216	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000070;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000070:8;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1208217	1208322	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000070;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000070:9;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1208217	1208322	.	+	2	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000070;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000070:8;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1208323	1210600	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000070;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000070:9;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1210601	1210682	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000070;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000070:10;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1210601	1210682	.	+	1	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000070;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000070:9;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1210683	1212008	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000070;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000070:10;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1212009	1212308	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000070;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000070:11;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1212009	1212083	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000070;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000070:10;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1212081	1212083	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000070;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000070;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:NA19239_ch_T0000070;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1173111	1212308	100	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000071;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=NA19239_ch_T0000071;Name=IL3RA
NA19239_chrY	CAT	exon	1173111	1173252	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000071;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000071:0;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1173253	1178056	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000071;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000071:0;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1178057	1178155	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000071;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000071:1;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1178092	1178155	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000071;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000071:0;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1178092	1178094	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000071;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:NA19239_ch_T0000071;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1178156	1181644	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000071;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000071:1;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1181645	1181763	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000071;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000071:2;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1181645	1181763	.	+	2	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000071;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000071:1;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1181764	1184759	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000071;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000071:2;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1184760	1184874	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000071;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000071:3;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1184760	1184874	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000071;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000071:2;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1184875	1188431	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000071;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000071:3;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1188432	1188564	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000071;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000071:4;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1188432	1188564	.	+	2	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000071;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000071:3;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1188565	1188653	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000071;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000071:4;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1188654	1188838	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000071;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000071:5;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1188654	1188838	.	+	1	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000071;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000071:4;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1188839	1192510	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000071;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000071:5;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1192511	1192626	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000071;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000071:6;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1192511	1192626	.	+	2	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000071;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000071:5;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1192627	1195150	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000071;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000071:6;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1195151	1195177	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000071;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000071:7;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1195151	1195177	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000071;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000071:6;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1195178	1201410	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000071;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000071:7;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1201411	1201525	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000071;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000071:8;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1201411	1201525	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000071;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000071:7;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1201526	1208216	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000071;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000071:8;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1208217	1208322	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000071;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000071:9;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1208217	1208322	.	+	2	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000071;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000071:8;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1208323	1210600	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000071;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000071:9;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1210601	1210682	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000071;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000071:10;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1210601	1210682	.	+	1	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000071;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000071:9;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1210683	1212008	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000071;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000071:10;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1212009	1212308	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000071;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000071:11;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1212009	1212083	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000071;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000071:10;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1212081	1212083	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000071;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:NA19239_ch_T0000071;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1173111	1212308	100	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000072;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=NA19239_ch_T0000072;Name=IL3RA
NA19239_chrY	CAT	exon	1173111	1173252	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000072;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000072:0;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1173253	1178053	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000072;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000072:0;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1178054	1178155	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000072;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000072:1;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1178092	1178155	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000072;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000072:0;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1178092	1178094	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000072;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:NA19239_ch_T0000072;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1178156	1181644	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000072;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000072:1;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1181645	1181763	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000072;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000072:2;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1181645	1181763	.	+	2	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000072;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000072:1;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1181764	1184759	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000072;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000072:2;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1184760	1184874	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000072;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000072:3;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1184760	1184874	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000072;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000072:2;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1184875	1188431	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000072;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000072:3;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1188432	1188564	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000072;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000072:4;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1188432	1188564	.	+	2	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000072;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000072:3;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1188565	1188656	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000072;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000072:4;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1188657	1188838	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000072;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000072:5;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1188657	1188838	.	+	1	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000072;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000072:4;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1188839	1192510	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000072;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000072:5;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1192511	1192626	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000072;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000072:6;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1192511	1192626	.	+	2	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000072;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000072:5;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1192627	1195150	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000072;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000072:6;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1195151	1195177	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000072;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000072:7;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1195151	1195177	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000072;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000072:6;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1195178	1201410	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000072;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000072:7;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1201411	1201525	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000072;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000072:8;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1201411	1201525	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000072;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000072:7;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1201526	1208216	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000072;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000072:8;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1208217	1208322	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000072;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000072:9;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1208217	1208322	.	+	2	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000072;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000072:8;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1208323	1210600	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000072;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000072:9;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1210601	1210682	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000072;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000072:10;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1210601	1210682	.	+	1	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000072;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000072:9;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1210683	1212008	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000072;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000072:10;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1212009	1212308	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000072;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000072:11;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1212009	1212083	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000072;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000072:10;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1212081	1212083	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000072;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:NA19239_ch_T0000072;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1173111	1212308	100	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000073;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=NA19239_ch_T0000073;Name=IL3RA
NA19239_chrY	CAT	exon	1173111	1173252	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000073;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000073:0;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1173253	1178056	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000073;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000073:0;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1178057	1178155	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000073;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000073:1;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1178092	1178155	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000073;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000073:0;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1178092	1178094	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000073;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:NA19239_ch_T0000073;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1178156	1181644	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000073;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000073:1;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1181645	1181763	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000073;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000073:2;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1181645	1181763	.	+	2	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000073;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000073:1;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1181764	1184759	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000073;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000073:2;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1184760	1184874	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000073;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000073:3;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1184760	1184874	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000073;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000073:2;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1184875	1188431	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000073;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000073:3;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1188432	1188564	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000073;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000073:4;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1188432	1188564	.	+	2	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000073;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000073:3;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1188565	1188656	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000073;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000073:4;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1188657	1188838	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000073;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000073:5;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1188657	1188838	.	+	1	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000073;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000073:4;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1188839	1192510	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000073;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000073:5;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1192511	1192626	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000073;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000073:6;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1192511	1192626	.	+	2	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000073;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000073:5;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1192627	1195150	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000073;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000073:6;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1195151	1195177	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000073;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000073:7;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1195151	1195177	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000073;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000073:6;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1195178	1201410	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000073;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000073:7;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1201411	1201525	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000073;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000073:8;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1201411	1201525	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000073;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000073:7;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1201526	1208216	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000073;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000073:8;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1208217	1208322	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000073;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000073:9;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1208217	1208322	.	+	2	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000073;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000073:8;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1208323	1210600	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000073;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000073:9;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1210601	1210682	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000073;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000073:10;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1210601	1210682	.	+	1	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000073;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000073:9;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1210683	1212008	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000073;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000073:10;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1212009	1212308	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000073;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000073:11;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1212009	1212083	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000073;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000073:10;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1212081	1212083	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000073;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:NA19239_ch_T0000073;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1177908	1212308	100	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000075;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=NA19239_ch_T0000075;Name=IL3RA
NA19239_chrY	CAT	exon	1177908	1178155	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000075;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000075:0;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1177912	1178155	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000075;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000075:0;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1177912	1177914	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000075;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:NA19239_ch_T0000075;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1178156	1181644	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000075;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000075:0;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1181645	1181763	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000075;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000075:1;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1181645	1181763	.	+	2	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000075;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000075:1;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1181764	1184759	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000075;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000075:1;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1184760	1184874	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000075;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000075:2;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1184760	1184874	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000075;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000075:2;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1184875	1188431	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000075;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000075:2;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1188432	1188564	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000075;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000075:3;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1188432	1188564	.	+	2	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000075;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000075:3;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1188565	1188653	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000075;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000075:3;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1188654	1188838	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000075;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000075:4;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1188654	1188838	.	+	1	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000075;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000075:4;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1188839	1192510	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000075;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000075:4;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1192511	1192626	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000075;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000075:5;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1192511	1192626	.	+	2	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000075;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000075:5;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1192627	1195150	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000075;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000075:5;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1195151	1195177	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000075;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000075:6;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1195151	1195177	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000075;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000075:6;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1195178	1201410	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000075;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000075:6;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1201411	1201525	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000075;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000075:7;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1201411	1201525	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000075;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000075:7;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1201526	1208216	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000075;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000075:7;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1208217	1208322	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000075;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000075:8;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1208217	1208322	.	+	2	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000075;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000075:8;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1208323	1210600	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000075;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000075:8;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1210601	1210682	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000075;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000075:9;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1210601	1210682	.	+	1	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000075;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000075:9;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1210683	1212008	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000075;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000075:9;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1212009	1212308	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000075;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000075:10;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1212009	1212083	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000075;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000075:10;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1212081	1212083	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000075;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:NA19239_ch_T0000075;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1177908	1212308	100	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000076;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=NA19239_ch_T0000076;Name=IL3RA
NA19239_chrY	CAT	exon	1177908	1178155	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000076;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000076;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000076:0;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1177912	1178155	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000076;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000076;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000076:0;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1177912	1177914	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000076;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000076;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:NA19239_ch_T0000076;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1178156	1181644	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000076;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000076;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000076:0;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1181645	1181763	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000076;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000076;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000076:1;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1181645	1181763	.	+	2	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000076;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000076;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000076:1;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1181764	1184759	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000076;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000076;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000076:1;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1184760	1184874	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000076;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000076;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000076:2;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1184760	1184874	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000076;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000076;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000076:2;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1184875	1188431	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000076;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000076;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000076:2;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1188432	1188564	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000076;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000076;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000076:3;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1188432	1188564	.	+	2	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000076;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000076;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000076:3;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1188565	1188656	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000076;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000076;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000076:3;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1188657	1188838	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000076;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000076;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000076:4;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1188657	1188838	.	+	1	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000076;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000076;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000076:4;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1188839	1192510	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000076;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000076;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000076:4;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1192511	1192626	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000076;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000076;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000076:5;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1192511	1192626	.	+	2	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000076;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000076;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000076:5;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1192627	1195150	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000076;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000076;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000076:5;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1195151	1195177	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000076;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000076;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000076:6;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1195151	1195177	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000076;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000076;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000076:6;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1195178	1201410	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000076;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000076;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000076:6;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1201411	1201525	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000076;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000076;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000076:7;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1201411	1201525	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000076;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000076;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000076:7;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1201526	1208216	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000076;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000076;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000076:7;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1208217	1208322	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000076;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000076;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000076:8;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1208217	1208322	.	+	2	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000076;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000076;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000076:8;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1208323	1210600	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000076;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000076;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000076:8;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1210601	1210682	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000076;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000076;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000076:9;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1210601	1210682	.	+	1	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000076;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000076;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000076:9;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1210683	1212008	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000076;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000076;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19239_ch_T0000076:9;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1212009	1212308	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000076;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000076;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19239_ch_T0000076:10;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1212009	1212083	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000076;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000076;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19239_ch_T0000076:10;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1212081	1212083	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000076;gene_id=NA19239_ch_G0000013;Parent=NA19239_ch_T0000076;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:NA19239_ch_T0000076;Name=IL3RA;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	1173900	1208034	.	-	.	source_gene_common_name=LOC101928032;source_gene=hg002_chrY_paternal_21;alternative_source_transcripts=hg002_chrY_paternal_21.11;gene_id=NA19239_ch_G0000014;gene_biotype=lncRNA;gene_name=LOC101928032;gene_sources=liftoff,transMap;ID=NA19239_ch_G0000014;Name=LOC101928032
NA19239_chrY	CAT	transcript	1173900	1208034	1000	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.73900000000003;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000074;gene_id=NA19239_ch_G0000014;Parent=NA19239_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=NA19239_ch_T0000074;Name=LOC101928032
NA19239_chrY	CAT	exon	1173900	1175115	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.73900000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000074;gene_id=NA19239_ch_G0000014;Parent=NA19239_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19239_ch_T0000074:0;Name=LOC101928032;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1175116	1177923	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.73900000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000074;gene_id=NA19239_ch_G0000014;Parent=NA19239_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19239_ch_T0000074:0;Name=LOC101928032;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1177924	1178139	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.73900000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000074;gene_id=NA19239_ch_G0000014;Parent=NA19239_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19239_ch_T0000074:1;Name=LOC101928032;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1178140	1188641	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.73900000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000074;gene_id=NA19239_ch_G0000014;Parent=NA19239_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19239_ch_T0000074:1;Name=LOC101928032;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1188642	1189050	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.73900000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000074;gene_id=NA19239_ch_G0000014;Parent=NA19239_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19239_ch_T0000074:2;Name=LOC101928032;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1189051	1191867	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.73900000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000074;gene_id=NA19239_ch_G0000014;Parent=NA19239_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19239_ch_T0000074:2;Name=LOC101928032;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1191868	1192437	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.73900000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000074;gene_id=NA19239_ch_G0000014;Parent=NA19239_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19239_ch_T0000074:3;Name=LOC101928032;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1192438	1197641	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.73900000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000074;gene_id=NA19239_ch_G0000014;Parent=NA19239_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19239_ch_T0000074:3;Name=LOC101928032;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1197642	1198020	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.73900000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000074;gene_id=NA19239_ch_G0000014;Parent=NA19239_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19239_ch_T0000074:4;Name=LOC101928032;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1198021	1201375	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.73900000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000074;gene_id=NA19239_ch_G0000014;Parent=NA19239_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19239_ch_T0000074:4;Name=LOC101928032;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1201376	1201444	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.73900000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000074;gene_id=NA19239_ch_G0000014;Parent=NA19239_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19239_ch_T0000074:5;Name=LOC101928032;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1201445	1204032	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.73900000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000074;gene_id=NA19239_ch_G0000014;Parent=NA19239_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19239_ch_T0000074:5;Name=LOC101928032;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1204033	1204167	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.73900000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000074;gene_id=NA19239_ch_G0000014;Parent=NA19239_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19239_ch_T0000074:6;Name=LOC101928032;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1204168	1207879	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.73900000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000074;gene_id=NA19239_ch_G0000014;Parent=NA19239_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19239_ch_T0000074:6;Name=LOC101928032;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1207880	1208034	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.73900000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000074;gene_id=NA19239_ch_G0000014;Parent=NA19239_ch_T0000074;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19239_ch_T0000074:7;Name=LOC101928032;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1187098	1208034	1000	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=299.926;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000077;gene_id=NA19239_ch_G0000014;Parent=NA19239_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=NA19239_ch_T0000077;Name=LOC101928032
NA19239_chrY	CAT	exon	1187098	1187184	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000077;gene_id=NA19239_ch_G0000014;Parent=NA19239_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19239_ch_T0000077:0;Name=LOC101928032;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1187185	1188641	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000077;gene_id=NA19239_ch_G0000014;Parent=NA19239_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19239_ch_T0000077:0;Name=LOC101928032;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1188642	1189050	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000077;gene_id=NA19239_ch_G0000014;Parent=NA19239_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19239_ch_T0000077:1;Name=LOC101928032;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1189051	1191867	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000077;gene_id=NA19239_ch_G0000014;Parent=NA19239_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19239_ch_T0000077:1;Name=LOC101928032;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1191868	1192437	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000077;gene_id=NA19239_ch_G0000014;Parent=NA19239_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19239_ch_T0000077:2;Name=LOC101928032;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1192438	1201375	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000077;gene_id=NA19239_ch_G0000014;Parent=NA19239_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19239_ch_T0000077:2;Name=LOC101928032;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1201376	1201444	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000077;gene_id=NA19239_ch_G0000014;Parent=NA19239_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19239_ch_T0000077:3;Name=LOC101928032;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1201445	1204032	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000077;gene_id=NA19239_ch_G0000014;Parent=NA19239_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19239_ch_T0000077:3;Name=LOC101928032;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1204033	1204167	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000077;gene_id=NA19239_ch_G0000014;Parent=NA19239_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19239_ch_T0000077:4;Name=LOC101928032;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1204168	1207879	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000077;gene_id=NA19239_ch_G0000014;Parent=NA19239_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19239_ch_T0000077:4;Name=LOC101928032;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1207880	1208034	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000077;gene_id=NA19239_ch_G0000014;Parent=NA19239_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19239_ch_T0000077:5;Name=LOC101928032;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	1215761	1221842	.	-	.	source_gene_common_name=SLC25A6;source_gene=hg002_chrY_paternal_22;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;gene_id=NA19239_ch_G0000015;gene_biotype=protein_coding;gene_name=SLC25A6;gene_sources=liftoff,augTM;ID=NA19239_ch_G0000015;Name=SLC25A6
NA19239_chrY	CAT	transcript	1215761	1221842	100	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000078;gene_id=NA19239_ch_G0000015;Parent=NA19239_ch_G0000015;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=NA19239_ch_T0000078;Name=SLC25A6
NA19239_chrY	CAT	exon	1215761	1216368	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000078;gene_id=NA19239_ch_G0000015;Parent=NA19239_ch_T0000078;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=exon:NA19239_ch_T0000078:0;Name=SLC25A6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1216211	1216368	.	-	2	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000078;gene_id=NA19239_ch_G0000015;Parent=NA19239_ch_T0000078;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=CDS:NA19239_ch_T0000078:0;Name=SLC25A6;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1216211	1216213	.	-	0	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000078;gene_id=NA19239_ch_G0000015;Parent=NA19239_ch_T0000078;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=stop_codon:NA19239_ch_T0000078;Name=SLC25A6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1216369	1216887	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000078;gene_id=NA19239_ch_G0000015;Parent=NA19239_ch_T0000078;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=intron:NA19239_ch_T0000078:0;Name=SLC25A6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1216888	1217028	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000078;gene_id=NA19239_ch_G0000015;Parent=NA19239_ch_T0000078;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=exon:NA19239_ch_T0000078:1;Name=SLC25A6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1216888	1217028	.	-	2	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000078;gene_id=NA19239_ch_G0000015;Parent=NA19239_ch_T0000078;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=CDS:NA19239_ch_T0000078:1;Name=SLC25A6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1217029	1218849	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000078;gene_id=NA19239_ch_G0000015;Parent=NA19239_ch_T0000078;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=intron:NA19239_ch_T0000078:1;Name=SLC25A6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1218850	1219336	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000078;gene_id=NA19239_ch_G0000015;Parent=NA19239_ch_T0000078;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=exon:NA19239_ch_T0000078:2;Name=SLC25A6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1218850	1219336	.	-	0	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000078;gene_id=NA19239_ch_G0000015;Parent=NA19239_ch_T0000078;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=CDS:NA19239_ch_T0000078:2;Name=SLC25A6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1219337	1221627	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000078;gene_id=NA19239_ch_G0000015;Parent=NA19239_ch_T0000078;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=intron:NA19239_ch_T0000078:2;Name=SLC25A6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1221628	1221842	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000078;gene_id=NA19239_ch_G0000015;Parent=NA19239_ch_T0000078;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=exon:NA19239_ch_T0000078:3;Name=SLC25A6;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1221628	1221738	.	-	0	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000078;gene_id=NA19239_ch_G0000015;Parent=NA19239_ch_T0000078;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=CDS:NA19239_ch_T0000078:3;Name=SLC25A6;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1221736	1221738	.	-	0	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000078;gene_id=NA19239_ch_G0000015;Parent=NA19239_ch_T0000078;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=start_codon:NA19239_ch_T0000078;Name=SLC25A6;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	1221722	1226671	.	+	.	source_gene_common_name=LOC105373102;source_gene=hg002_chrY_paternal_23;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;gene_id=NA19239_ch_G0000016;gene_biotype=protein_coding;gene_name=LOC105373102;gene_sources=liftoff,augTM;ID=NA19239_ch_G0000016;Name=LOC105373102
NA19239_chrY	CAT	transcript	1221722	1226671	100	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000079;gene_id=NA19239_ch_G0000016;Parent=NA19239_ch_G0000016;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=NA19239_ch_T0000079;Name=LOC105373102
NA19239_chrY	CAT	exon	1221722	1222070	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000079;gene_id=NA19239_ch_G0000016;Parent=NA19239_ch_T0000079;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=exon:NA19239_ch_T0000079:0;Name=LOC105373102;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1221722	1222070	.	+	0	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000079;gene_id=NA19239_ch_G0000016;Parent=NA19239_ch_T0000079;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=CDS:NA19239_ch_T0000079:0;Name=LOC105373102;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1221722	1221724	.	+	0	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000079;gene_id=NA19239_ch_G0000016;Parent=NA19239_ch_T0000079;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=start_codon:NA19239_ch_T0000079;Name=LOC105373102;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1222071	1224919	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000079;gene_id=NA19239_ch_G0000016;Parent=NA19239_ch_T0000079;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=intron:NA19239_ch_T0000079:0;Name=LOC105373102;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1224920	1225338	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000079;gene_id=NA19239_ch_G0000016;Parent=NA19239_ch_T0000079;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=exon:NA19239_ch_T0000079:1;Name=LOC105373102;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1224920	1225338	.	+	2	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000079;gene_id=NA19239_ch_G0000016;Parent=NA19239_ch_T0000079;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=CDS:NA19239_ch_T0000079:1;Name=LOC105373102;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1225339	1226161	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000079;gene_id=NA19239_ch_G0000016;Parent=NA19239_ch_T0000079;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=intron:NA19239_ch_T0000079:1;Name=LOC105373102;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1226162	1226671	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000079;gene_id=NA19239_ch_G0000016;Parent=NA19239_ch_T0000079;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=exon:NA19239_ch_T0000079:2;Name=LOC105373102;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1226162	1226182	.	+	0	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000079;gene_id=NA19239_ch_G0000016;Parent=NA19239_ch_T0000079;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=CDS:NA19239_ch_T0000079:2;Name=LOC105373102;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1226180	1226182	.	+	0	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000079;gene_id=NA19239_ch_G0000016;Parent=NA19239_ch_T0000079;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=stop_codon:NA19239_ch_T0000079;Name=LOC105373102;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1221722	1226671	1000	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000080;gene_id=NA19239_ch_G0000016;Parent=NA19239_ch_G0000016;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=NA19239_ch_T0000080;Name=LOC105373102
NA19239_chrY	CAT	exon	1221722	1222070	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000080;gene_id=NA19239_ch_G0000016;Parent=NA19239_ch_T0000080;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=exon:NA19239_ch_T0000080:0;Name=LOC105373102;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1222071	1224919	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000080;gene_id=NA19239_ch_G0000016;Parent=NA19239_ch_T0000080;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=intron:NA19239_ch_T0000080:0;Name=LOC105373102;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1224920	1225338	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000080;gene_id=NA19239_ch_G0000016;Parent=NA19239_ch_T0000080;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=exon:NA19239_ch_T0000080:1;Name=LOC105373102;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1225339	1226161	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000080;gene_id=NA19239_ch_G0000016;Parent=NA19239_ch_T0000080;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=intron:NA19239_ch_T0000080:1;Name=LOC105373102;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1226162	1226305	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000080;gene_id=NA19239_ch_G0000016;Parent=NA19239_ch_T0000080;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=exon:NA19239_ch_T0000080:2;Name=LOC105373102;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1226306	1226399	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000080;gene_id=NA19239_ch_G0000016;Parent=NA19239_ch_T0000080;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=intron:NA19239_ch_T0000080:2;Name=LOC105373102;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1226400	1226671	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000080;gene_id=NA19239_ch_G0000016;Parent=NA19239_ch_T0000080;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=exon:NA19239_ch_T0000080:3;Name=LOC105373102;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	1226815	1229202	.	+	.	source_gene_common_name=LINC00106;source_gene=hg002_chrY_paternal_24;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;gene_id=NA19239_ch_G0000017;gene_biotype=lncRNA;gene_name=LINC00106;gene_sources=liftoff;ID=NA19239_ch_G0000017;Name=LINC00106
NA19239_chrY	CAT	transcript	1226815	1229202	1000	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=NA19239_ch_T0000081;gene_id=NA19239_ch_G0000017;Parent=NA19239_ch_G0000017;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=NA19239_ch_T0000081;Name=LINC00106
NA19239_chrY	CAT	exon	1226815	1227014	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=NA19239_ch_T0000081;gene_id=NA19239_ch_G0000017;Parent=NA19239_ch_T0000081;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=exon:NA19239_ch_T0000081:0;Name=LINC00106;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1227015	1228614	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=NA19239_ch_T0000081;gene_id=NA19239_ch_G0000017;Parent=NA19239_ch_T0000081;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=intron:NA19239_ch_T0000081:0;Name=LINC00106;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1228615	1228748	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=NA19239_ch_T0000081;gene_id=NA19239_ch_G0000017;Parent=NA19239_ch_T0000081;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=exon:NA19239_ch_T0000081:1;Name=LINC00106;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1228749	1229156	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=NA19239_ch_T0000081;gene_id=NA19239_ch_G0000017;Parent=NA19239_ch_T0000081;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=intron:NA19239_ch_T0000081:1;Name=LINC00106;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1229157	1229202	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=NA19239_ch_T0000081;gene_id=NA19239_ch_G0000017;Parent=NA19239_ch_T0000081;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=exon:NA19239_ch_T0000081:2;Name=LINC00106;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	1230317	1243149	.	+	.	source_gene_common_name=ASMTL-AS1;source_gene=hg002_chrY_paternal_25;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;gene_id=NA19239_ch_G0000018;gene_biotype=lncRNA;gene_name=ASMTL-AS1;gene_sources=liftoff;ID=NA19239_ch_G0000018;Name=ASMTL-AS1
NA19239_chrY	CAT	transcript	1230317	1241314	1000	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=NA19239_ch_T0000082;gene_id=NA19239_ch_G0000018;Parent=NA19239_ch_G0000018;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=NA19239_ch_T0000082;Name=ASMTL-AS1
NA19239_chrY	CAT	exon	1230317	1230372	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=NA19239_ch_T0000082;gene_id=NA19239_ch_G0000018;Parent=NA19239_ch_T0000082;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:NA19239_ch_T0000082:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1230373	1231247	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=NA19239_ch_T0000082;gene_id=NA19239_ch_G0000018;Parent=NA19239_ch_T0000082;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:NA19239_ch_T0000082:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1231248	1232011	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=NA19239_ch_T0000082;gene_id=NA19239_ch_G0000018;Parent=NA19239_ch_T0000082;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:NA19239_ch_T0000082:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1232012	1233168	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=NA19239_ch_T0000082;gene_id=NA19239_ch_G0000018;Parent=NA19239_ch_T0000082;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:NA19239_ch_T0000082:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1233169	1233293	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=NA19239_ch_T0000082;gene_id=NA19239_ch_G0000018;Parent=NA19239_ch_T0000082;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:NA19239_ch_T0000082:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1233294	1240470	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=NA19239_ch_T0000082;gene_id=NA19239_ch_G0000018;Parent=NA19239_ch_T0000082;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:NA19239_ch_T0000082:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1240471	1241314	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=NA19239_ch_T0000082;gene_id=NA19239_ch_G0000018;Parent=NA19239_ch_T0000082;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:NA19239_ch_T0000082:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1230317	1243149	1000	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=NA19239_ch_T0000083;gene_id=NA19239_ch_G0000018;Parent=NA19239_ch_G0000018;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=NA19239_ch_T0000083;Name=ASMTL-AS1
NA19239_chrY	CAT	exon	1230317	1230372	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=NA19239_ch_T0000083;gene_id=NA19239_ch_G0000018;Parent=NA19239_ch_T0000083;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:NA19239_ch_T0000083:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1230373	1231247	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=NA19239_ch_T0000083;gene_id=NA19239_ch_G0000018;Parent=NA19239_ch_T0000083;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:NA19239_ch_T0000083:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1231248	1232011	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=NA19239_ch_T0000083;gene_id=NA19239_ch_G0000018;Parent=NA19239_ch_T0000083;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:NA19239_ch_T0000083:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1232012	1233168	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=NA19239_ch_T0000083;gene_id=NA19239_ch_G0000018;Parent=NA19239_ch_T0000083;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:NA19239_ch_T0000083:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1233169	1233293	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=NA19239_ch_T0000083;gene_id=NA19239_ch_G0000018;Parent=NA19239_ch_T0000083;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:NA19239_ch_T0000083:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1233294	1240470	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=NA19239_ch_T0000083;gene_id=NA19239_ch_G0000018;Parent=NA19239_ch_T0000083;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:NA19239_ch_T0000083:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1240471	1240616	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=NA19239_ch_T0000083;gene_id=NA19239_ch_G0000018;Parent=NA19239_ch_T0000083;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:NA19239_ch_T0000083:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1240617	1241489	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=NA19239_ch_T0000083;gene_id=NA19239_ch_G0000018;Parent=NA19239_ch_T0000083;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:NA19239_ch_T0000083:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1241490	1242038	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=NA19239_ch_T0000083;gene_id=NA19239_ch_G0000018;Parent=NA19239_ch_T0000083;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:NA19239_ch_T0000083:4;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1242039	1242470	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=NA19239_ch_T0000083;gene_id=NA19239_ch_G0000018;Parent=NA19239_ch_T0000083;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:NA19239_ch_T0000083:4;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1242471	1243149	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=NA19239_ch_T0000083;gene_id=NA19239_ch_G0000018;Parent=NA19239_ch_T0000083;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:NA19239_ch_T0000083:5;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	1232847	1282582	.	-	.	source_gene_common_name=ASMTL;source_gene=hg002_chrY_paternal_26;gene_id=NA19239_ch_G0000019;gene_biotype=protein_coding;gene_name=ASMTL;gene_sources=liftoff,augTM,transMap,transMap_pairwise;ID=NA19239_ch_G0000019;Name=ASMTL
NA19239_chrY	CAT	transcript	1232847	1282582	9940	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_G0000019;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=NA19239_ch_T0000084;Name=ASMTL
NA19239_chrY	CAT	exon	1232847	1233197	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000084:0;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1232977	1233197	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19239_ch_T0000084:0;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1232977	1232979	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:NA19239_ch_T0000084;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1233198	1240459	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19239_ch_T0000084:0;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1240460	1240582	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000084:1;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1240460	1240582	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19239_ch_T0000084:1;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1240583	1245711	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19239_ch_T0000084:1;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1245712	1245855	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000084:2;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1245712	1245855	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19239_ch_T0000084:2;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1245856	1246720	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19239_ch_T0000084:2;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1246721	1246853	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000084:3;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1246721	1246853	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19239_ch_T0000084:3;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1246854	1249390	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19239_ch_T0000084:3;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1249391	1249575	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000084:4;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1249391	1249575	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19239_ch_T0000084:4;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1249576	1253249	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19239_ch_T0000084:4;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1253250	1253412	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000084:5;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1253250	1253412	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19239_ch_T0000084:5;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1253413	1255458	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19239_ch_T0000084:5;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1255459	1255846	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000084:6;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1255459	1255846	.	-	1	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19239_ch_T0000084:6;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1255847	1260023	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19239_ch_T0000084:6;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1260024	1260132	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000084:7;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1260024	1260132	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19239_ch_T0000084:7;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1260133	1264120	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19239_ch_T0000084:7;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1264121	1264182	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000084:8;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1264121	1264182	.	-	1	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19239_ch_T0000084:8;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1264183	1264792	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19239_ch_T0000084:8;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1264793	1264857	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000084:9;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1264793	1264857	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19239_ch_T0000084:9;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1264858	1268195	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19239_ch_T0000084:9;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1268196	1268243	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000084:10;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1268196	1268243	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19239_ch_T0000084:10;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1268244	1271284	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19239_ch_T0000084:10;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1271285	1271416	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000084:11;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1271285	1271335	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19239_ch_T0000084:11;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1271333	1271335	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:NA19239_ch_T0000084;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1271417	1282453	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19239_ch_T0000084:11;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1282454	1282582	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000084;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000084;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000084:12;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1232847	1282582	9940	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_G0000019;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=NA19239_ch_T0000085;Name=ASMTL
NA19239_chrY	CAT	exon	1232847	1233197	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000085:0;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1232977	1233197	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19239_ch_T0000085:0;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1232977	1232979	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:NA19239_ch_T0000085;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1233198	1240459	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19239_ch_T0000085:0;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1240460	1240582	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000085:1;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1240460	1240582	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19239_ch_T0000085:1;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1240583	1245711	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19239_ch_T0000085:1;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1245712	1245855	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000085:2;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1245712	1245855	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19239_ch_T0000085:2;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1245856	1246720	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19239_ch_T0000085:2;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1246721	1246853	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000085:3;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1246721	1246853	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19239_ch_T0000085:3;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1246854	1249390	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19239_ch_T0000085:3;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1249391	1249575	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000085:4;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1249391	1249575	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19239_ch_T0000085:4;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1249576	1253249	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19239_ch_T0000085:4;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1253250	1253412	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000085:5;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1253250	1253412	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19239_ch_T0000085:5;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1253413	1255458	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19239_ch_T0000085:5;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1255459	1255846	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000085:6;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1255459	1255846	.	-	1	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19239_ch_T0000085:6;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1255847	1260023	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19239_ch_T0000085:6;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1260024	1260132	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000085:7;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1260024	1260132	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19239_ch_T0000085:7;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1260133	1264120	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19239_ch_T0000085:7;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1264121	1264182	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000085:8;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1264121	1264182	.	-	1	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19239_ch_T0000085:8;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1264183	1264792	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19239_ch_T0000085:8;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1264793	1264857	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000085:9;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1264793	1264857	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19239_ch_T0000085:9;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1264858	1268195	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19239_ch_T0000085:9;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1268196	1268243	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000085:10;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1268196	1268243	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19239_ch_T0000085:10;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1268244	1271284	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19239_ch_T0000085:10;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1271285	1271416	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000085:11;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1271285	1271416	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19239_ch_T0000085:11;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1271417	1281661	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19239_ch_T0000085:11;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1281662	1281820	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000085:12;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1281662	1281754	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19239_ch_T0000085:12;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1281752	1281754	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:NA19239_ch_T0000085;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1281821	1282453	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19239_ch_T0000085:12;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1282454	1282582	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000085;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000085;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000085:13;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1232847	1282582	9940	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000086;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_G0000019;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=NA19239_ch_T0000086;Name=ASMTL
NA19239_chrY	CAT	exon	1232847	1233197	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000086;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000086;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000086:0;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1232977	1233197	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000086;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000086;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19239_ch_T0000086:0;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1232977	1232979	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000086;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000086;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:NA19239_ch_T0000086;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1233198	1240459	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000086;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000086;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19239_ch_T0000086:0;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1240460	1240582	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000086;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000086;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000086:1;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1240460	1240582	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000086;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000086;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19239_ch_T0000086:1;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1240583	1245711	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000086;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000086;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19239_ch_T0000086:1;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1245712	1245855	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000086;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000086;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000086:2;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1245712	1245855	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000086;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000086;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19239_ch_T0000086:2;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1245856	1246720	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000086;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000086;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19239_ch_T0000086:2;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1246721	1246853	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000086;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000086;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000086:3;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1246721	1246853	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000086;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000086;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19239_ch_T0000086:3;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1246854	1249390	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000086;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000086;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19239_ch_T0000086:3;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1249391	1249575	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000086;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000086;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000086:4;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1249391	1249575	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000086;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000086;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19239_ch_T0000086:4;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1249576	1253249	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000086;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000086;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19239_ch_T0000086:4;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1253250	1253412	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000086;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000086;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000086:5;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1253250	1253412	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000086;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000086;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19239_ch_T0000086:5;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1253413	1255458	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000086;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000086;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19239_ch_T0000086:5;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1255459	1255846	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000086;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000086;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000086:6;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1255459	1255846	.	-	1	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000086;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000086;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19239_ch_T0000086:6;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1255847	1260023	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000086;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000086;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19239_ch_T0000086:6;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1260024	1260132	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000086;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000086;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000086:7;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1260024	1260132	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000086;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000086;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19239_ch_T0000086:7;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1260133	1264120	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000086;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000086;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19239_ch_T0000086:7;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1264121	1264182	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000086;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000086;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000086:8;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1264121	1264182	.	-	1	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000086;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000086;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19239_ch_T0000086:8;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1264183	1268195	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000086;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000086;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19239_ch_T0000086:8;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1268196	1268243	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000086;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000086;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000086:9;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1268196	1268243	.	-	1	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000086;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000086;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19239_ch_T0000086:9;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1268244	1271284	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000086;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000086;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19239_ch_T0000086:9;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1271285	1271416	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000086;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000086;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000086:10;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1271285	1271346	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000086;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000086;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19239_ch_T0000086:10;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1271344	1271346	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000086;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000086;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:NA19239_ch_T0000086;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1271417	1282453	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000086;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000086;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19239_ch_T0000086:10;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1282454	1282582	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=NA19239_ch_T0000086;gene_id=NA19239_ch_G0000019;Parent=NA19239_ch_T0000086;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19239_ch_T0000086:11;Name=ASMTL;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	1291365	1366819	.	-	.	source_gene_common_name=P2RY8;source_gene=hg002_chrY_paternal_27;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;gene_id=NA19239_ch_G0000020;gene_biotype=protein_coding;gene_name=P2RY8;gene_sources=liftoff,augTM;ID=NA19239_ch_G0000020;Name=P2RY8
NA19239_chrY	CAT	transcript	1291365	1296508	100	-	.	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000087;gene_id=NA19239_ch_G0000020;Parent=NA19239_ch_G0000020;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=NA19239_ch_T0000087;Name=P2RY8
NA19239_chrY	CAT	exon	1291365	1295364	.	-	.	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000087;gene_id=NA19239_ch_G0000020;Parent=NA19239_ch_T0000087;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:NA19239_ch_T0000087:0;Name=P2RY8;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1294261	1295340	.	-	0	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000087;gene_id=NA19239_ch_G0000020;Parent=NA19239_ch_T0000087;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:NA19239_ch_T0000087:0;Name=P2RY8;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1294261	1294263	.	-	0	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000087;gene_id=NA19239_ch_G0000020;Parent=NA19239_ch_T0000087;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:NA19239_ch_T0000087;Name=P2RY8;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1295338	1295340	.	-	0	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000087;gene_id=NA19239_ch_G0000020;Parent=NA19239_ch_T0000087;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:NA19239_ch_T0000087;Name=P2RY8;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1295365	1295812	.	-	.	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000087;gene_id=NA19239_ch_G0000020;Parent=NA19239_ch_T0000087;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:NA19239_ch_T0000087:0;Name=P2RY8;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1295813	1296508	.	-	.	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000087;gene_id=NA19239_ch_G0000020;Parent=NA19239_ch_T0000087;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:NA19239_ch_T0000087:1;Name=P2RY8;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1291365	1322145	100	-	.	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000088;gene_id=NA19239_ch_G0000020;Parent=NA19239_ch_G0000020;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=NA19239_ch_T0000088;Name=P2RY8
NA19239_chrY	CAT	exon	1291365	1295364	.	-	.	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000088;gene_id=NA19239_ch_G0000020;Parent=NA19239_ch_T0000088;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:NA19239_ch_T0000088:0;Name=P2RY8;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1294261	1295340	.	-	0	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000088;gene_id=NA19239_ch_G0000020;Parent=NA19239_ch_T0000088;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:NA19239_ch_T0000088:0;Name=P2RY8;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1294261	1294263	.	-	0	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000088;gene_id=NA19239_ch_G0000020;Parent=NA19239_ch_T0000088;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:NA19239_ch_T0000088;Name=P2RY8;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1295338	1295340	.	-	0	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000088;gene_id=NA19239_ch_G0000020;Parent=NA19239_ch_T0000088;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:NA19239_ch_T0000088;Name=P2RY8;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1295365	1322090	.	-	.	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000088;gene_id=NA19239_ch_G0000020;Parent=NA19239_ch_T0000088;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:NA19239_ch_T0000088:0;Name=P2RY8;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1322091	1322145	.	-	.	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000088;gene_id=NA19239_ch_G0000020;Parent=NA19239_ch_T0000088;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:NA19239_ch_T0000088:1;Name=P2RY8;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1291365	1323806	100	-	.	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000089;gene_id=NA19239_ch_G0000020;Parent=NA19239_ch_G0000020;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=NA19239_ch_T0000089;Name=P2RY8
NA19239_chrY	CAT	exon	1291365	1295364	.	-	.	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000089;gene_id=NA19239_ch_G0000020;Parent=NA19239_ch_T0000089;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:NA19239_ch_T0000089:0;Name=P2RY8;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1294261	1295340	.	-	0	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000089;gene_id=NA19239_ch_G0000020;Parent=NA19239_ch_T0000089;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:NA19239_ch_T0000089:0;Name=P2RY8;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1294261	1294263	.	-	0	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000089;gene_id=NA19239_ch_G0000020;Parent=NA19239_ch_T0000089;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:NA19239_ch_T0000089;Name=P2RY8;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1295338	1295340	.	-	0	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000089;gene_id=NA19239_ch_G0000020;Parent=NA19239_ch_T0000089;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:NA19239_ch_T0000089;Name=P2RY8;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1295365	1323188	.	-	.	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000089;gene_id=NA19239_ch_G0000020;Parent=NA19239_ch_T0000089;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:NA19239_ch_T0000089:0;Name=P2RY8;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1323189	1323806	.	-	.	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000089;gene_id=NA19239_ch_G0000020;Parent=NA19239_ch_T0000089;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:NA19239_ch_T0000089:1;Name=P2RY8;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1291365	1366819	100	-	.	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000090;gene_id=NA19239_ch_G0000020;Parent=NA19239_ch_G0000020;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=NA19239_ch_T0000090;Name=P2RY8
NA19239_chrY	CAT	exon	1291365	1295364	.	-	.	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000090;gene_id=NA19239_ch_G0000020;Parent=NA19239_ch_T0000090;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:NA19239_ch_T0000090:0;Name=P2RY8;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1294261	1295340	.	-	0	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000090;gene_id=NA19239_ch_G0000020;Parent=NA19239_ch_T0000090;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:NA19239_ch_T0000090:0;Name=P2RY8;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1294261	1294263	.	-	0	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000090;gene_id=NA19239_ch_G0000020;Parent=NA19239_ch_T0000090;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:NA19239_ch_T0000090;Name=P2RY8;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1295338	1295340	.	-	0	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000090;gene_id=NA19239_ch_G0000020;Parent=NA19239_ch_T0000090;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:NA19239_ch_T0000090;Name=P2RY8;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1295365	1366554	.	-	.	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000090;gene_id=NA19239_ch_G0000020;Parent=NA19239_ch_T0000090;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:NA19239_ch_T0000090:0;Name=P2RY8;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1366555	1366819	.	-	.	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000090;gene_id=NA19239_ch_G0000020;Parent=NA19239_ch_T0000090;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:NA19239_ch_T0000090:1;Name=P2RY8;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1291365	1366819	100	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000091;gene_id=NA19239_ch_G0000020;Parent=NA19239_ch_G0000020;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=NA19239_ch_T0000091;Name=P2RY8
NA19239_chrY	CAT	exon	1291365	1295364	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000091;gene_id=NA19239_ch_G0000020;Parent=NA19239_ch_T0000091;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:NA19239_ch_T0000091:0;Name=P2RY8;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1294261	1295340	.	-	0	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000091;gene_id=NA19239_ch_G0000020;Parent=NA19239_ch_T0000091;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:NA19239_ch_T0000091:0;Name=P2RY8;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1294261	1294263	.	-	0	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000091;gene_id=NA19239_ch_G0000020;Parent=NA19239_ch_T0000091;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:NA19239_ch_T0000091;Name=P2RY8;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1295338	1295340	.	-	0	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000091;gene_id=NA19239_ch_G0000020;Parent=NA19239_ch_T0000091;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:NA19239_ch_T0000091;Name=P2RY8;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1295365	1297287	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000091;gene_id=NA19239_ch_G0000020;Parent=NA19239_ch_T0000091;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:NA19239_ch_T0000091:0;Name=P2RY8;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1297288	1297456	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000091;gene_id=NA19239_ch_G0000020;Parent=NA19239_ch_T0000091;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:NA19239_ch_T0000091:1;Name=P2RY8;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1297457	1366554	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000091;gene_id=NA19239_ch_G0000020;Parent=NA19239_ch_T0000091;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:NA19239_ch_T0000091:1;Name=P2RY8;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1366555	1366819	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000091;gene_id=NA19239_ch_G0000020;Parent=NA19239_ch_T0000091;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:NA19239_ch_T0000091:2;Name=P2RY8;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	1420847	1431434	.	+	.	source_gene_common_name=AKAP17A;source_gene=hg002_chrY_paternal_28;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;gene_id=NA19239_ch_G0000021;gene_biotype=protein_coding;gene_name=AKAP17A;gene_sources=liftoff,augTM;ID=NA19239_ch_G0000021;Name=AKAP17A
NA19239_chrY	CAT	transcript	1420847	1431434	100	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000092;gene_id=NA19239_ch_G0000021;Parent=NA19239_ch_G0000021;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=NA19239_ch_T0000092;Name=AKAP17A
NA19239_chrY	CAT	exon	1420847	1421012	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000092;gene_id=NA19239_ch_G0000021;Parent=NA19239_ch_T0000092;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:NA19239_ch_T0000092:0;Name=AKAP17A;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1421013	1422686	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000092;gene_id=NA19239_ch_G0000021;Parent=NA19239_ch_T0000092;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=intron:NA19239_ch_T0000092:0;Name=AKAP17A;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1422687	1423467	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000092;gene_id=NA19239_ch_G0000021;Parent=NA19239_ch_T0000092;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:NA19239_ch_T0000092:1;Name=AKAP17A;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1422706	1423467	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000092;gene_id=NA19239_ch_G0000021;Parent=NA19239_ch_T0000092;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=CDS:NA19239_ch_T0000092:0;Name=AKAP17A;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1422706	1422708	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000092;gene_id=NA19239_ch_G0000021;Parent=NA19239_ch_T0000092;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=start_codon:NA19239_ch_T0000092;Name=AKAP17A;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1423468	1424598	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000092;gene_id=NA19239_ch_G0000021;Parent=NA19239_ch_T0000092;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=intron:NA19239_ch_T0000092:1;Name=AKAP17A;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1424599	1424747	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000092;gene_id=NA19239_ch_G0000021;Parent=NA19239_ch_T0000092;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:NA19239_ch_T0000092:2;Name=AKAP17A;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1424599	1424747	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000092;gene_id=NA19239_ch_G0000021;Parent=NA19239_ch_T0000092;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=CDS:NA19239_ch_T0000092:1;Name=AKAP17A;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1424748	1428105	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000092;gene_id=NA19239_ch_G0000021;Parent=NA19239_ch_T0000092;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=intron:NA19239_ch_T0000092:2;Name=AKAP17A;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1428106	1428346	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000092;gene_id=NA19239_ch_G0000021;Parent=NA19239_ch_T0000092;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:NA19239_ch_T0000092:3;Name=AKAP17A;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1428106	1428346	.	+	1	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000092;gene_id=NA19239_ch_G0000021;Parent=NA19239_ch_T0000092;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=CDS:NA19239_ch_T0000092:2;Name=AKAP17A;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1428347	1429572	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000092;gene_id=NA19239_ch_G0000021;Parent=NA19239_ch_T0000092;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=intron:NA19239_ch_T0000092:3;Name=AKAP17A;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1429573	1431434	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000092;gene_id=NA19239_ch_G0000021;Parent=NA19239_ch_T0000092;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:NA19239_ch_T0000092:4;Name=AKAP17A;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1429573	1430508	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000092;gene_id=NA19239_ch_G0000021;Parent=NA19239_ch_T0000092;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=CDS:NA19239_ch_T0000092:3;Name=AKAP17A;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1430506	1430508	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000092;gene_id=NA19239_ch_G0000021;Parent=NA19239_ch_T0000092;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=stop_codon:NA19239_ch_T0000092;Name=AKAP17A;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1420847	1431434	1000	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000093;gene_id=NA19239_ch_G0000021;Parent=NA19239_ch_G0000021;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=NA19239_ch_T0000093;Name=AKAP17A
NA19239_chrY	CAT	exon	1420847	1421012	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000093;gene_id=NA19239_ch_G0000021;Parent=NA19239_ch_T0000093;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:NA19239_ch_T0000093:0;Name=AKAP17A;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1421013	1422686	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000093;gene_id=NA19239_ch_G0000021;Parent=NA19239_ch_T0000093;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:NA19239_ch_T0000093:0;Name=AKAP17A;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1422687	1423467	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000093;gene_id=NA19239_ch_G0000021;Parent=NA19239_ch_T0000093;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:NA19239_ch_T0000093:1;Name=AKAP17A;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1423468	1424598	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000093;gene_id=NA19239_ch_G0000021;Parent=NA19239_ch_T0000093;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:NA19239_ch_T0000093:1;Name=AKAP17A;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1424599	1424747	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000093;gene_id=NA19239_ch_G0000021;Parent=NA19239_ch_T0000093;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:NA19239_ch_T0000093:2;Name=AKAP17A;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1424748	1428105	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000093;gene_id=NA19239_ch_G0000021;Parent=NA19239_ch_T0000093;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:NA19239_ch_T0000093:2;Name=AKAP17A;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1428106	1428346	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000093;gene_id=NA19239_ch_G0000021;Parent=NA19239_ch_T0000093;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:NA19239_ch_T0000093:3;Name=AKAP17A;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1428347	1429051	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000093;gene_id=NA19239_ch_G0000021;Parent=NA19239_ch_T0000093;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:NA19239_ch_T0000093:3;Name=AKAP17A;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1429052	1429121	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000093;gene_id=NA19239_ch_G0000021;Parent=NA19239_ch_T0000093;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:NA19239_ch_T0000093:4;Name=AKAP17A;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1429122	1429572	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000093;gene_id=NA19239_ch_G0000021;Parent=NA19239_ch_T0000093;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:NA19239_ch_T0000093:4;Name=AKAP17A;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1429573	1431434	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000093;gene_id=NA19239_ch_G0000021;Parent=NA19239_ch_T0000093;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:NA19239_ch_T0000093:5;Name=AKAP17A;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	1424670	1491836	.	+	.	source_gene_common_name=ASMT;source_gene=hg002_chrY_paternal_29;gene_id=NA19239_ch_G0000022;gene_biotype=protein_coding;gene_name=ASMT;gene_sources=liftoff,augTM,transMap;ID=NA19239_ch_G0000022;Name=ASMT
NA19239_chrY	CAT	transcript	1424670	1491836	9980	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=299.822;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000094;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_G0000022;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=NA19239_ch_T0000094;Name=ASMT
NA19239_chrY	CAT	exon	1424670	1424747	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000094;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19239_ch_T0000094:0;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1424748	1444018	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000094;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19239_ch_T0000094:0;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1444019	1444154	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000094;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19239_ch_T0000094:1;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1444086	1444154	.	+	0	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000094;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19239_ch_T0000094:0;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1444086	1444088	.	+	0	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000094;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=start_codon:NA19239_ch_T0000094;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1444155	1452023	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000094;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19239_ch_T0000094:1;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1452024	1452198	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000094;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19239_ch_T0000094:2;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1452024	1452198	.	+	0	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000094;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19239_ch_T0000094:1;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1452199	1453153	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000094;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19239_ch_T0000094:2;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1453154	1453283	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000094;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19239_ch_T0000094:3;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1453154	1453283	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000094;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19239_ch_T0000094:2;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1453284	1456555	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000094;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19239_ch_T0000094:3;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1456556	1456624	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000094;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19239_ch_T0000094:4;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1456556	1456624	.	+	1	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000094;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19239_ch_T0000094:3;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1456625	1458673	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000094;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19239_ch_T0000094:4;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1458674	1458792	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000094;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19239_ch_T0000094:5;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1458674	1458792	.	+	1	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000094;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19239_ch_T0000094:4;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1458793	1461560	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000094;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19239_ch_T0000094:5;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1461561	1461644	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000094;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19239_ch_T0000094:6;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1461561	1461644	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000094;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19239_ch_T0000094:5;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1461645	1462006	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000094;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19239_ch_T0000094:6;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1462007	1462147	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000094;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19239_ch_T0000094:7;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1462007	1462147	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000094;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19239_ch_T0000094:6;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1462148	1488651	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000094;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19239_ch_T0000094:7;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1488652	1488774	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000094;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19239_ch_T0000094:8;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1488652	1488774	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000094;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19239_ch_T0000094:7;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1488775	1491557	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000094;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19239_ch_T0000094:8;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1491558	1491836	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000094;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19239_ch_T0000094:9;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1491558	1491769	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000094;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19239_ch_T0000094:8;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1491767	1491769	.	+	0	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000094;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000094;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=stop_codon:NA19239_ch_T0000094;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1443945	1491836	9980	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=299.822;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000095;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_G0000022;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=NA19239_ch_T0000095;Name=ASMT
NA19239_chrY	CAT	exon	1443945	1444154	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000095;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19239_ch_T0000095:0;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1444086	1444154	.	+	0	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000095;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19239_ch_T0000095:0;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1444086	1444088	.	+	0	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000095;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=start_codon:NA19239_ch_T0000095;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1444155	1452023	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000095;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19239_ch_T0000095:0;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1452024	1452198	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000095;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19239_ch_T0000095:1;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1452024	1452198	.	+	0	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000095;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19239_ch_T0000095:1;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1452199	1453153	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000095;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19239_ch_T0000095:1;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1453154	1453283	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000095;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19239_ch_T0000095:2;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1453154	1453283	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000095;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19239_ch_T0000095:2;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1453284	1456555	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000095;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19239_ch_T0000095:2;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1456556	1456624	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000095;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19239_ch_T0000095:3;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1456556	1456624	.	+	1	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000095;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19239_ch_T0000095:3;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1456625	1458673	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000095;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19239_ch_T0000095:3;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1458674	1458792	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000095;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19239_ch_T0000095:4;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1458674	1458792	.	+	1	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000095;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19239_ch_T0000095:4;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1458793	1461560	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000095;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19239_ch_T0000095:4;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1461561	1461644	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000095;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19239_ch_T0000095:5;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1461561	1461644	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000095;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19239_ch_T0000095:5;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1461645	1462006	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000095;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19239_ch_T0000095:5;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1462007	1462147	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000095;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19239_ch_T0000095:6;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1462007	1462147	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000095;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19239_ch_T0000095:6;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1462148	1488651	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000095;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19239_ch_T0000095:6;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1488652	1488774	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000095;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19239_ch_T0000095:7;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1488652	1488774	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000095;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19239_ch_T0000095:7;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1488775	1491557	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000095;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19239_ch_T0000095:7;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1491558	1491836	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000095;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19239_ch_T0000095:8;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1491558	1491769	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000095;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19239_ch_T0000095:8;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1491767	1491769	.	+	0	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000095;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000095;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=stop_codon:NA19239_ch_T0000095;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1444019	1491836	9990	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=299.889;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000096;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_G0000022;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=NA19239_ch_T0000096;Name=ASMT
NA19239_chrY	CAT	exon	1444019	1444154	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000096;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000096;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19239_ch_T0000096:0;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1444086	1444154	.	+	0	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000096;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000096;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19239_ch_T0000096:0;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	1444086	1444088	.	+	0	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000096;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000096;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=start_codon:NA19239_ch_T0000096;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1444155	1452023	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000096;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000096;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19239_ch_T0000096:0;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1452024	1452198	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000096;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000096;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19239_ch_T0000096:1;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1452024	1452198	.	+	0	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000096;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000096;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19239_ch_T0000096:1;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1452199	1453153	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000096;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000096;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19239_ch_T0000096:1;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1453154	1453283	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000096;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000096;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19239_ch_T0000096:2;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1453154	1453283	.	+	2	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000096;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000096;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19239_ch_T0000096:2;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1453284	1456555	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000096;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000096;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19239_ch_T0000096:2;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1456556	1456624	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000096;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000096;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19239_ch_T0000096:3;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1456556	1456624	.	+	1	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000096;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000096;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19239_ch_T0000096:3;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1456625	1458673	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000096;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000096;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19239_ch_T0000096:3;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1458674	1458792	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000096;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000096;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19239_ch_T0000096:4;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1458674	1458792	.	+	1	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000096;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000096;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19239_ch_T0000096:4;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1458793	1488651	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000096;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000096;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19239_ch_T0000096:4;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1488652	1488774	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000096;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000096;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19239_ch_T0000096:5;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1488652	1488774	.	+	2	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000096;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000096;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19239_ch_T0000096:5;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1488775	1491557	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000096;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000096;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19239_ch_T0000096:5;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1491558	1491836	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000096;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000096;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19239_ch_T0000096:6;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1491558	1491769	.	+	2	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000096;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000096;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19239_ch_T0000096:6;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1491767	1491769	.	+	0	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000096;gene_id=NA19239_ch_G0000022;Parent=NA19239_ch_T0000096;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=stop_codon:NA19239_ch_T0000096;Name=ASMT;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	1579102	1602992	.	+	.	source_gene_common_name=LINC02968;source_gene=hg002_chrY_paternal_30;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;gene_id=NA19239_ch_G0000023;gene_biotype=lncRNA;gene_name=LINC02968;gene_sources=liftoff;ID=NA19239_ch_G0000023;Name=LINC02968
NA19239_chrY	CAT	transcript	1579102	1602992	1000	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=NA19239_ch_T0000097;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=NA19239_ch_T0000097;Name=LINC02968
NA19239_chrY	CAT	exon	1579102	1579406	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=NA19239_ch_T0000097;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000097;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000097:0;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1579407	1580638	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=NA19239_ch_T0000097;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000097;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000097:0;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1580639	1580882	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=NA19239_ch_T0000097;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000097;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000097:1;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1580883	1590494	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=NA19239_ch_T0000097;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000097;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000097:1;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1590495	1590708	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=NA19239_ch_T0000097;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000097;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000097:2;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1590709	1590801	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=NA19239_ch_T0000097;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000097;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000097:2;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1590802	1591586	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=NA19239_ch_T0000097;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000097;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000097:3;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1591587	1594303	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=NA19239_ch_T0000097;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000097;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000097:3;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1594304	1594555	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=NA19239_ch_T0000097;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000097;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000097:4;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1594556	1598298	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=NA19239_ch_T0000097;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000097;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000097:4;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1598299	1598358	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=NA19239_ch_T0000097;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000097;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000097:5;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1598359	1602691	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=NA19239_ch_T0000097;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000097;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000097:5;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1602692	1602992	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=NA19239_ch_T0000097;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000097;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000097:6;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1579156	1602992	1000	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=NA19239_ch_T0000098;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=NA19239_ch_T0000098;Name=LINC02968
NA19239_chrY	CAT	exon	1579156	1579406	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=NA19239_ch_T0000098;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000098;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000098:0;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1579407	1580635	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=NA19239_ch_T0000098;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000098;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000098:0;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1580636	1580897	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=NA19239_ch_T0000098;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000098;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000098:1;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1580898	1588945	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=NA19239_ch_T0000098;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000098;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000098:1;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1588946	1589041	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=NA19239_ch_T0000098;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000098;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000098:2;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1589042	1590297	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=NA19239_ch_T0000098;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000098;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000098:2;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1590298	1590708	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=NA19239_ch_T0000098;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000098;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000098:3;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1590709	1590801	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=NA19239_ch_T0000098;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000098;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000098:3;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1590802	1591586	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=NA19239_ch_T0000098;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000098;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000098:4;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1591587	1594303	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=NA19239_ch_T0000098;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000098;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000098:4;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1594304	1594555	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=NA19239_ch_T0000098;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000098;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000098:5;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1594556	1598298	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=NA19239_ch_T0000098;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000098;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000098:5;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1598299	1598358	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=NA19239_ch_T0000098;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000098;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000098:6;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1598359	1602691	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=NA19239_ch_T0000098;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000098;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000098:6;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1602692	1602992	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=NA19239_ch_T0000098;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000098;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000098:7;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1579239	1602992	1000	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=NA19239_ch_T0000099;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=NA19239_ch_T0000099;Name=LINC02968
NA19239_chrY	CAT	exon	1579239	1579406	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=NA19239_ch_T0000099;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000099;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000099:0;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1579407	1580635	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=NA19239_ch_T0000099;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000099;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000099:0;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1580636	1580882	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=NA19239_ch_T0000099;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000099;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000099:1;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1580883	1588945	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=NA19239_ch_T0000099;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000099;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000099:1;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1588946	1589041	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=NA19239_ch_T0000099;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000099;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000099:2;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1589042	1590494	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=NA19239_ch_T0000099;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000099;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000099:2;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1590495	1590708	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=NA19239_ch_T0000099;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000099;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000099:3;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1590709	1590801	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=NA19239_ch_T0000099;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000099;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000099:3;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1590802	1591586	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=NA19239_ch_T0000099;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000099;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000099:4;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1591587	1594303	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=NA19239_ch_T0000099;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000099;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000099:4;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1594304	1594555	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=NA19239_ch_T0000099;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000099;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000099:5;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1594556	1598298	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=NA19239_ch_T0000099;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000099;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000099:5;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1598299	1598358	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=NA19239_ch_T0000099;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000099;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000099:6;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1598359	1602691	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=NA19239_ch_T0000099;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000099;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000099:6;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1602692	1602992	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=NA19239_ch_T0000099;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000099;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000099:7;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1579239	1602992	1000	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=NA19239_ch_T0000100;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=NA19239_ch_T0000100;Name=LINC02968
NA19239_chrY	CAT	exon	1579239	1579406	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=NA19239_ch_T0000100;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000100;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000100:0;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1579407	1580635	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=NA19239_ch_T0000100;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000100;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000100:0;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1580636	1580882	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=NA19239_ch_T0000100;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000100;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000100:1;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1580883	1588945	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=NA19239_ch_T0000100;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000100;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000100:1;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1588946	1589041	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=NA19239_ch_T0000100;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000100;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000100:2;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1589042	1590491	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=NA19239_ch_T0000100;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000100;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000100:2;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1590492	1590708	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=NA19239_ch_T0000100;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000100;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000100:3;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1590709	1590801	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=NA19239_ch_T0000100;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000100;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000100:3;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1590802	1591586	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=NA19239_ch_T0000100;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000100;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000100:4;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1591587	1594303	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=NA19239_ch_T0000100;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000100;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000100:4;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1594304	1594555	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=NA19239_ch_T0000100;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000100;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000100:5;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1594556	1598298	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=NA19239_ch_T0000100;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000100;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000100:5;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1598299	1598358	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=NA19239_ch_T0000100;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000100;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000100:6;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1598359	1602691	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=NA19239_ch_T0000100;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000100;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000100:6;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1602692	1602992	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=NA19239_ch_T0000100;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000100;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000100:7;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1579239	1602992	1000	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=NA19239_ch_T0000101;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=NA19239_ch_T0000101;Name=LINC02968
NA19239_chrY	CAT	exon	1579239	1579406	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=NA19239_ch_T0000101;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000101;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000101:0;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1579407	1580638	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=NA19239_ch_T0000101;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000101;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000101:0;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1580639	1580882	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=NA19239_ch_T0000101;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000101;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000101:1;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1580883	1588945	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=NA19239_ch_T0000101;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000101;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000101:1;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1588946	1589041	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=NA19239_ch_T0000101;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000101;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000101:2;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1589042	1590494	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=NA19239_ch_T0000101;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000101;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000101:2;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1590495	1590708	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=NA19239_ch_T0000101;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000101;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000101:3;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1590709	1590801	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=NA19239_ch_T0000101;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000101;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000101:3;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1590802	1591586	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=NA19239_ch_T0000101;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000101;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000101:4;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1591587	1594303	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=NA19239_ch_T0000101;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000101;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000101:4;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1594304	1594555	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=NA19239_ch_T0000101;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000101;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000101:5;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1594556	1598298	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=NA19239_ch_T0000101;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000101;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000101:5;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1598299	1598358	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=NA19239_ch_T0000101;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000101;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000101:6;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1598359	1602691	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=NA19239_ch_T0000101;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000101;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000101:6;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1602692	1602992	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=NA19239_ch_T0000101;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000101;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000101:7;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1579239	1602992	1000	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=NA19239_ch_T0000102;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=NA19239_ch_T0000102;Name=LINC02968
NA19239_chrY	CAT	exon	1579239	1579406	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=NA19239_ch_T0000102;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000102;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000102:0;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1579407	1580635	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=NA19239_ch_T0000102;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000102;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000102:0;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1580636	1580882	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=NA19239_ch_T0000102;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000102;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000102:1;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1580883	1588945	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=NA19239_ch_T0000102;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000102;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000102:1;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1588946	1589041	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=NA19239_ch_T0000102;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000102;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000102:2;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1589042	1590602	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=NA19239_ch_T0000102;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000102;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000102:2;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1590603	1590708	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=NA19239_ch_T0000102;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000102;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000102:3;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1590709	1590801	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=NA19239_ch_T0000102;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000102;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000102:3;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1590802	1591586	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=NA19239_ch_T0000102;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000102;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000102:4;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1591587	1594303	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=NA19239_ch_T0000102;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000102;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000102:4;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1594304	1594555	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=NA19239_ch_T0000102;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000102;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000102:5;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1594556	1598298	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=NA19239_ch_T0000102;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000102;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000102:5;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1598299	1598358	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=NA19239_ch_T0000102;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000102;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000102:6;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1598359	1602691	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=NA19239_ch_T0000102;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000102;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19239_ch_T0000102:6;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1602692	1602992	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=NA19239_ch_T0000102;gene_id=NA19239_ch_G0000023;Parent=NA19239_ch_T0000102;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19239_ch_T0000102:7;Name=LINC02968;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	1617116	1630413	.	+	.	source_gene_common_name=LOC105379413;source_gene=hg002_chrY_paternal_31;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;gene_id=NA19239_ch_G0000024;gene_biotype=lncRNA;gene_name=LOC105379413;gene_sources=liftoff;ID=NA19239_ch_G0000024;Name=LOC105379413
NA19239_chrY	CAT	transcript	1617116	1630413	1000	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=NA19239_ch_T0000103;gene_id=NA19239_ch_G0000024;Parent=NA19239_ch_G0000024;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=NA19239_ch_T0000103;Name=LOC105379413
NA19239_chrY	CAT	exon	1617116	1617692	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=NA19239_ch_T0000103;gene_id=NA19239_ch_G0000024;Parent=NA19239_ch_T0000103;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:NA19239_ch_T0000103:0;Name=LOC105379413;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1617693	1622140	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=NA19239_ch_T0000103;gene_id=NA19239_ch_G0000024;Parent=NA19239_ch_T0000103;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=intron:NA19239_ch_T0000103:0;Name=LOC105379413;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1622141	1622354	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=NA19239_ch_T0000103;gene_id=NA19239_ch_G0000024;Parent=NA19239_ch_T0000103;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:NA19239_ch_T0000103:1;Name=LOC105379413;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1622355	1627284	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=NA19239_ch_T0000103;gene_id=NA19239_ch_G0000024;Parent=NA19239_ch_T0000103;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=intron:NA19239_ch_T0000103:1;Name=LOC105379413;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1627285	1630413	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=NA19239_ch_T0000103;gene_id=NA19239_ch_G0000024;Parent=NA19239_ch_T0000103;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:NA19239_ch_T0000103:2;Name=LOC105379413;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	1617116	1630413	1000	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=NA19239_ch_T0000104;gene_id=NA19239_ch_G0000024;Parent=NA19239_ch_G0000024;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=NA19239_ch_T0000104;Name=LOC105379413
NA19239_chrY	CAT	exon	1617116	1617692	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=NA19239_ch_T0000104;gene_id=NA19239_ch_G0000024;Parent=NA19239_ch_T0000104;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:NA19239_ch_T0000104:0;Name=LOC105379413;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1617693	1622140	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=NA19239_ch_T0000104;gene_id=NA19239_ch_G0000024;Parent=NA19239_ch_T0000104;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=intron:NA19239_ch_T0000104:0;Name=LOC105379413;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1622141	1622303	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=NA19239_ch_T0000104;gene_id=NA19239_ch_G0000024;Parent=NA19239_ch_T0000104;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:NA19239_ch_T0000104:1;Name=LOC105379413;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1622304	1627284	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=NA19239_ch_T0000104;gene_id=NA19239_ch_G0000024;Parent=NA19239_ch_T0000104;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=intron:NA19239_ch_T0000104:1;Name=LOC105379413;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1627285	1630413	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=NA19239_ch_T0000104;gene_id=NA19239_ch_G0000024;Parent=NA19239_ch_T0000104;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:NA19239_ch_T0000104:2;Name=LOC105379413;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	1724776	1730899	.	-	.	source_gene_common_name=LOC107985677;source_gene=hg002_chrY_paternal_32;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;gene_id=NA19239_ch_G0000025;gene_biotype=lncRNA;gene_name=LOC107985677;gene_sources=liftoff;ID=NA19239_ch_G0000025;Name=LOC107985677
NA19239_chrY	CAT	transcript	1724776	1730899	1000	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=NA19239_ch_T0000105;gene_id=NA19239_ch_G0000025;Parent=NA19239_ch_G0000025;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=NA19239_ch_T0000105;Name=LOC107985677
NA19239_chrY	CAT	exon	1724776	1725829	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=NA19239_ch_T0000105;gene_id=NA19239_ch_G0000025;Parent=NA19239_ch_T0000105;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:NA19239_ch_T0000105:0;Name=LOC107985677;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1725830	1726806	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=NA19239_ch_T0000105;gene_id=NA19239_ch_G0000025;Parent=NA19239_ch_T0000105;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:NA19239_ch_T0000105:0;Name=LOC107985677;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1726807	1726920	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=NA19239_ch_T0000105;gene_id=NA19239_ch_G0000025;Parent=NA19239_ch_T0000105;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:NA19239_ch_T0000105:1;Name=LOC107985677;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1726921	1727409	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=NA19239_ch_T0000105;gene_id=NA19239_ch_G0000025;Parent=NA19239_ch_T0000105;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:NA19239_ch_T0000105:1;Name=LOC107985677;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1727410	1727540	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=NA19239_ch_T0000105;gene_id=NA19239_ch_G0000025;Parent=NA19239_ch_T0000105;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:NA19239_ch_T0000105:2;Name=LOC107985677;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1727541	1728871	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=NA19239_ch_T0000105;gene_id=NA19239_ch_G0000025;Parent=NA19239_ch_T0000105;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:NA19239_ch_T0000105:2;Name=LOC107985677;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1728872	1729186	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=NA19239_ch_T0000105;gene_id=NA19239_ch_G0000025;Parent=NA19239_ch_T0000105;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:NA19239_ch_T0000105:3;Name=LOC107985677;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1729187	1729586	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=NA19239_ch_T0000105;gene_id=NA19239_ch_G0000025;Parent=NA19239_ch_T0000105;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:NA19239_ch_T0000105:3;Name=LOC107985677;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1729587	1730186	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=NA19239_ch_T0000105;gene_id=NA19239_ch_G0000025;Parent=NA19239_ch_T0000105;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:NA19239_ch_T0000105:4;Name=LOC107985677;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1730187	1730560	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=NA19239_ch_T0000105;gene_id=NA19239_ch_G0000025;Parent=NA19239_ch_T0000105;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:NA19239_ch_T0000105:4;Name=LOC107985677;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1730561	1730899	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=NA19239_ch_T0000105;gene_id=NA19239_ch_G0000025;Parent=NA19239_ch_T0000105;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:NA19239_ch_T0000105:5;Name=LOC107985677;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	1879424	2161400	.	-	.	source_gene_common_name=DHRSX;source_gene=hg002_chrY_paternal_33;alternative_source_transcripts=hg002_chrY_paternal_33.1;gene_id=NA19239_ch_G0000026;gene_biotype=protein_coding;gene_name=DHRSX;gene_sources=liftoff,augTM,transMap;ID=NA19239_ch_G0000026;Name=DHRSX
NA19239_chrY	CAT	transcript	1879424	2161400	9980	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=299.899;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000106;gene_id=NA19239_ch_G0000026;Parent=NA19239_ch_G0000026;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=NA19239_ch_T0000106;Name=DHRSX
NA19239_chrY	CAT	exon	1879424	1881146	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=299.899;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000106;gene_id=NA19239_ch_G0000026;Parent=NA19239_ch_T0000106;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:NA19239_ch_T0000106:0;Name=DHRSX;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1880958	1881146	.	-	0	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=299.899;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000106;gene_id=NA19239_ch_G0000026;Parent=NA19239_ch_T0000106;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:NA19239_ch_T0000106:0;Name=DHRSX;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	1880958	1880960	.	-	0	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=299.899;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000106;gene_id=NA19239_ch_G0000026;Parent=NA19239_ch_T0000106;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=stop_codon:NA19239_ch_T0000106;Name=DHRSX;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1881147	1903569	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=299.899;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000106;gene_id=NA19239_ch_G0000026;Parent=NA19239_ch_T0000106;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:NA19239_ch_T0000106:0;Name=DHRSX;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1903570	1903777	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=299.899;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000106;gene_id=NA19239_ch_G0000026;Parent=NA19239_ch_T0000106;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:NA19239_ch_T0000106:1;Name=DHRSX;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1903570	1903777	.	-	1	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=299.899;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000106;gene_id=NA19239_ch_G0000026;Parent=NA19239_ch_T0000106;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:NA19239_ch_T0000106:1;Name=DHRSX;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1903778	1927568	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=299.899;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000106;gene_id=NA19239_ch_G0000026;Parent=NA19239_ch_T0000106;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:NA19239_ch_T0000106:1;Name=DHRSX;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1927569	1927776	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=299.899;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000106;gene_id=NA19239_ch_G0000026;Parent=NA19239_ch_T0000106;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:NA19239_ch_T0000106:2;Name=DHRSX;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1927569	1927776	.	-	2	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=299.899;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000106;gene_id=NA19239_ch_G0000026;Parent=NA19239_ch_T0000106;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:NA19239_ch_T0000106:2;Name=DHRSX;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1927777	1947514	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=299.899;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000106;gene_id=NA19239_ch_G0000026;Parent=NA19239_ch_T0000106;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:NA19239_ch_T0000106:2;Name=DHRSX;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1947515	1947616	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=299.899;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000106;gene_id=NA19239_ch_G0000026;Parent=NA19239_ch_T0000106;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:NA19239_ch_T0000106:3;Name=DHRSX;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	1947515	1947616	.	-	2	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=299.899;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000106;gene_id=NA19239_ch_G0000026;Parent=NA19239_ch_T0000106;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:NA19239_ch_T0000106:3;Name=DHRSX;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1947617	2069222	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=299.899;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000106;gene_id=NA19239_ch_G0000026;Parent=NA19239_ch_T0000106;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:NA19239_ch_T0000106:3;Name=DHRSX;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2069223	2069291	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=299.899;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000106;gene_id=NA19239_ch_G0000026;Parent=NA19239_ch_T0000106;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:NA19239_ch_T0000106:4;Name=DHRSX;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2069223	2069291	.	-	2	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=299.899;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000106;gene_id=NA19239_ch_G0000026;Parent=NA19239_ch_T0000106;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:NA19239_ch_T0000106:4;Name=DHRSX;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2069292	2085676	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=299.899;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000106;gene_id=NA19239_ch_G0000026;Parent=NA19239_ch_T0000106;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:NA19239_ch_T0000106:4;Name=DHRSX;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2085677	2085784	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=299.899;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000106;gene_id=NA19239_ch_G0000026;Parent=NA19239_ch_T0000106;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:NA19239_ch_T0000106:5;Name=DHRSX;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2085677	2085784	.	-	2	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=299.899;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000106;gene_id=NA19239_ch_G0000026;Parent=NA19239_ch_T0000106;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:NA19239_ch_T0000106:5;Name=DHRSX;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2085785	2161240	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=299.899;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000106;gene_id=NA19239_ch_G0000026;Parent=NA19239_ch_T0000106;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:NA19239_ch_T0000106:5;Name=DHRSX;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2161241	2161400	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=299.899;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000106;gene_id=NA19239_ch_G0000026;Parent=NA19239_ch_T0000106;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:NA19239_ch_T0000106:6;Name=DHRSX;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2161241	2161349	.	-	0	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=299.899;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000106;gene_id=NA19239_ch_G0000026;Parent=NA19239_ch_T0000106;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:NA19239_ch_T0000106:6;Name=DHRSX;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	2161347	2161349	.	-	0	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=299.899;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000106;gene_id=NA19239_ch_G0000026;Parent=NA19239_ch_T0000106;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=start_codon:NA19239_ch_T0000106;Name=DHRSX;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	1981111	1998148	.	+	.	source_gene_common_name=LOC124905239;source_gene=hg002_chrY_paternal_34;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;gene_id=NA19239_ch_G0000027;gene_biotype=lncRNA;gene_name=LOC124905239;gene_sources=liftoff;ID=NA19239_ch_G0000027;Name=LOC124905239
NA19239_chrY	CAT	transcript	1981111	1998148	1000	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=NA19239_ch_T0000107;gene_id=NA19239_ch_G0000027;Parent=NA19239_ch_G0000027;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=NA19239_ch_T0000107;Name=LOC124905239
NA19239_chrY	CAT	exon	1981111	1982388	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=NA19239_ch_T0000107;gene_id=NA19239_ch_G0000027;Parent=NA19239_ch_T0000107;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=exon:NA19239_ch_T0000107:0;Name=LOC124905239;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1982389	1989899	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=NA19239_ch_T0000107;gene_id=NA19239_ch_G0000027;Parent=NA19239_ch_T0000107;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=intron:NA19239_ch_T0000107:0;Name=LOC124905239;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1989900	1990026	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=NA19239_ch_T0000107;gene_id=NA19239_ch_G0000027;Parent=NA19239_ch_T0000107;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=exon:NA19239_ch_T0000107:1;Name=LOC124905239;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	1990027	1997981	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=NA19239_ch_T0000107;gene_id=NA19239_ch_G0000027;Parent=NA19239_ch_T0000107;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=intron:NA19239_ch_T0000107:1;Name=LOC124905239;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	1997982	1998148	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=NA19239_ch_T0000107;gene_id=NA19239_ch_G0000027;Parent=NA19239_ch_T0000107;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=exon:NA19239_ch_T0000107:2;Name=LOC124905239;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	2146856	2161400	.	-	.	source_gene_common_name=ZBED1;source_gene=hg002_chrY_paternal_35;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;gene_id=NA19239_ch_G0000028;gene_biotype=protein_coding;gene_name=ZBED1;gene_sources=liftoff,augTM;ID=NA19239_ch_G0000028;Name=ZBED1
NA19239_chrY	CAT	transcript	2146856	2161049	100	-	.	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000108;gene_id=NA19239_ch_G0000028;Parent=NA19239_ch_G0000028;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=NA19239_ch_T0000108;Name=ZBED1
NA19239_chrY	CAT	exon	2146856	2151193	.	-	.	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000108;gene_id=NA19239_ch_G0000028;Parent=NA19239_ch_T0000108;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:NA19239_ch_T0000108:0;Name=ZBED1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2149056	2151140	.	-	0	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000108;gene_id=NA19239_ch_G0000028;Parent=NA19239_ch_T0000108;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=CDS:NA19239_ch_T0000108:0;Name=ZBED1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	2149056	2149058	.	-	0	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000108;gene_id=NA19239_ch_G0000028;Parent=NA19239_ch_T0000108;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=stop_codon:NA19239_ch_T0000108;Name=ZBED1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	2151138	2151140	.	-	0	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000108;gene_id=NA19239_ch_G0000028;Parent=NA19239_ch_T0000108;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=start_codon:NA19239_ch_T0000108;Name=ZBED1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2151194	2160734	.	-	.	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000108;gene_id=NA19239_ch_G0000028;Parent=NA19239_ch_T0000108;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=intron:NA19239_ch_T0000108:0;Name=ZBED1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2160735	2161049	.	-	.	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000108;gene_id=NA19239_ch_G0000028;Parent=NA19239_ch_T0000108;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:NA19239_ch_T0000108:1;Name=ZBED1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	2146856	2161400	100	-	.	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000109;gene_id=NA19239_ch_G0000028;Parent=NA19239_ch_G0000028;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=NA19239_ch_T0000109;Name=ZBED1
NA19239_chrY	CAT	exon	2146856	2151193	.	-	.	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000109;gene_id=NA19239_ch_G0000028;Parent=NA19239_ch_T0000109;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:NA19239_ch_T0000109:0;Name=ZBED1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2149056	2151140	.	-	0	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000109;gene_id=NA19239_ch_G0000028;Parent=NA19239_ch_T0000109;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=CDS:NA19239_ch_T0000109:0;Name=ZBED1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	2149056	2149058	.	-	0	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000109;gene_id=NA19239_ch_G0000028;Parent=NA19239_ch_T0000109;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=stop_codon:NA19239_ch_T0000109;Name=ZBED1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	2151138	2151140	.	-	0	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000109;gene_id=NA19239_ch_G0000028;Parent=NA19239_ch_T0000109;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=start_codon:NA19239_ch_T0000109;Name=ZBED1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2151194	2161240	.	-	.	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000109;gene_id=NA19239_ch_G0000028;Parent=NA19239_ch_T0000109;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=intron:NA19239_ch_T0000109:0;Name=ZBED1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2161241	2161400	.	-	.	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000109;gene_id=NA19239_ch_G0000028;Parent=NA19239_ch_T0000109;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:NA19239_ch_T0000109:1;Name=ZBED1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	2146856	2161400	100	-	.	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000110;gene_id=NA19239_ch_G0000028;Parent=NA19239_ch_G0000028;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=NA19239_ch_T0000110;Name=ZBED1
NA19239_chrY	CAT	exon	2146856	2151190	.	-	.	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000110;gene_id=NA19239_ch_G0000028;Parent=NA19239_ch_T0000110;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:NA19239_ch_T0000110:0;Name=ZBED1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2149056	2151140	.	-	0	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000110;gene_id=NA19239_ch_G0000028;Parent=NA19239_ch_T0000110;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=CDS:NA19239_ch_T0000110:0;Name=ZBED1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	2149056	2149058	.	-	0	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000110;gene_id=NA19239_ch_G0000028;Parent=NA19239_ch_T0000110;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=stop_codon:NA19239_ch_T0000110;Name=ZBED1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	2151138	2151140	.	-	0	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000110;gene_id=NA19239_ch_G0000028;Parent=NA19239_ch_T0000110;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=start_codon:NA19239_ch_T0000110;Name=ZBED1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2151191	2161240	.	-	.	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000110;gene_id=NA19239_ch_G0000028;Parent=NA19239_ch_T0000110;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=intron:NA19239_ch_T0000110:0;Name=ZBED1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2161241	2161400	.	-	.	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000110;gene_id=NA19239_ch_G0000028;Parent=NA19239_ch_T0000110;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:NA19239_ch_T0000110:1;Name=ZBED1;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	2226263	2269603	.	-	.	source_gene_common_name=LOC101928092;source_gene=hg002_chrY_paternal_36;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;gene_id=NA19239_ch_G0000029;gene_biotype=lncRNA;gene_name=LOC101928092;gene_sources=liftoff;ID=NA19239_ch_G0000029;Name=LOC101928092
NA19239_chrY	CAT	transcript	2226263	2234865	1000	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=NA19239_ch_T0000111;gene_id=NA19239_ch_G0000029;Parent=NA19239_ch_G0000029;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=NA19239_ch_T0000111;Name=LOC101928092
NA19239_chrY	CAT	exon	2226263	2227526	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=NA19239_ch_T0000111;gene_id=NA19239_ch_G0000029;Parent=NA19239_ch_T0000111;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:NA19239_ch_T0000111:0;Name=LOC101928092;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2227527	2230241	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=NA19239_ch_T0000111;gene_id=NA19239_ch_G0000029;Parent=NA19239_ch_T0000111;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:NA19239_ch_T0000111:0;Name=LOC101928092;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2230242	2230397	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=NA19239_ch_T0000111;gene_id=NA19239_ch_G0000029;Parent=NA19239_ch_T0000111;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:NA19239_ch_T0000111:1;Name=LOC101928092;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2230398	2234327	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=NA19239_ch_T0000111;gene_id=NA19239_ch_G0000029;Parent=NA19239_ch_T0000111;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:NA19239_ch_T0000111:1;Name=LOC101928092;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2234328	2234865	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=NA19239_ch_T0000111;gene_id=NA19239_ch_G0000029;Parent=NA19239_ch_T0000111;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:NA19239_ch_T0000111:2;Name=LOC101928092;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	2226263	2234865	1000	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=NA19239_ch_T0000112;gene_id=NA19239_ch_G0000029;Parent=NA19239_ch_G0000029;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=NA19239_ch_T0000112;Name=LOC101928092
NA19239_chrY	CAT	exon	2226263	2227526	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=NA19239_ch_T0000112;gene_id=NA19239_ch_G0000029;Parent=NA19239_ch_T0000112;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:NA19239_ch_T0000112:0;Name=LOC101928092;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2227527	2230241	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=NA19239_ch_T0000112;gene_id=NA19239_ch_G0000029;Parent=NA19239_ch_T0000112;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:NA19239_ch_T0000112:0;Name=LOC101928092;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2230242	2230397	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=NA19239_ch_T0000112;gene_id=NA19239_ch_G0000029;Parent=NA19239_ch_T0000112;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:NA19239_ch_T0000112:1;Name=LOC101928092;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2230398	2234344	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=NA19239_ch_T0000112;gene_id=NA19239_ch_G0000029;Parent=NA19239_ch_T0000112;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:NA19239_ch_T0000112:1;Name=LOC101928092;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2234345	2234865	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=NA19239_ch_T0000112;gene_id=NA19239_ch_G0000029;Parent=NA19239_ch_T0000112;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:NA19239_ch_T0000112:2;Name=LOC101928092;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	2226263	2269535	1000	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=NA19239_ch_T0000113;gene_id=NA19239_ch_G0000029;Parent=NA19239_ch_G0000029;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=NA19239_ch_T0000113;Name=LOC101928092
NA19239_chrY	CAT	exon	2226263	2227526	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=NA19239_ch_T0000113;gene_id=NA19239_ch_G0000029;Parent=NA19239_ch_T0000113;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:NA19239_ch_T0000113:0;Name=LOC101928092;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2227527	2230241	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=NA19239_ch_T0000113;gene_id=NA19239_ch_G0000029;Parent=NA19239_ch_T0000113;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:NA19239_ch_T0000113:0;Name=LOC101928092;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2230242	2230397	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=NA19239_ch_T0000113;gene_id=NA19239_ch_G0000029;Parent=NA19239_ch_T0000113;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:NA19239_ch_T0000113:1;Name=LOC101928092;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2230398	2269468	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=NA19239_ch_T0000113;gene_id=NA19239_ch_G0000029;Parent=NA19239_ch_T0000113;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:NA19239_ch_T0000113:1;Name=LOC101928092;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2269469	2269535	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=NA19239_ch_T0000113;gene_id=NA19239_ch_G0000029;Parent=NA19239_ch_T0000113;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:NA19239_ch_T0000113:2;Name=LOC101928092;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	2226263	2269546	1000	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=NA19239_ch_T0000114;gene_id=NA19239_ch_G0000029;Parent=NA19239_ch_G0000029;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=NA19239_ch_T0000114;Name=LOC101928092
NA19239_chrY	CAT	exon	2226263	2227526	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=NA19239_ch_T0000114;gene_id=NA19239_ch_G0000029;Parent=NA19239_ch_T0000114;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:NA19239_ch_T0000114:0;Name=LOC101928092;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2227527	2230241	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=NA19239_ch_T0000114;gene_id=NA19239_ch_G0000029;Parent=NA19239_ch_T0000114;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:NA19239_ch_T0000114:0;Name=LOC101928092;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2230242	2230397	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=NA19239_ch_T0000114;gene_id=NA19239_ch_G0000029;Parent=NA19239_ch_T0000114;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:NA19239_ch_T0000114:1;Name=LOC101928092;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2230398	2234327	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=NA19239_ch_T0000114;gene_id=NA19239_ch_G0000029;Parent=NA19239_ch_T0000114;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:NA19239_ch_T0000114:1;Name=LOC101928092;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2234328	2234521	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=NA19239_ch_T0000114;gene_id=NA19239_ch_G0000029;Parent=NA19239_ch_T0000114;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:NA19239_ch_T0000114:2;Name=LOC101928092;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2234522	2269468	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=NA19239_ch_T0000114;gene_id=NA19239_ch_G0000029;Parent=NA19239_ch_T0000114;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:NA19239_ch_T0000114:2;Name=LOC101928092;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2269469	2269546	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=NA19239_ch_T0000114;gene_id=NA19239_ch_G0000029;Parent=NA19239_ch_T0000114;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:NA19239_ch_T0000114:3;Name=LOC101928092;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	2226263	2269603	1000	-	.	source_transcript=hg002_chrY_paternal_36.5;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.5,hg002_chrY_paternal_36.5;transcript_id=NA19239_ch_T0000115;gene_id=NA19239_ch_G0000029;Parent=NA19239_ch_G0000029;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=NA19239_ch_T0000115;Name=LOC101928092
NA19239_chrY	CAT	exon	2226263	2227526	.	-	.	source_transcript=hg002_chrY_paternal_36.5;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.5,hg002_chrY_paternal_36.5;transcript_id=NA19239_ch_T0000115;gene_id=NA19239_ch_G0000029;Parent=NA19239_ch_T0000115;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:NA19239_ch_T0000115:0;Name=LOC101928092;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2227527	2269468	.	-	.	source_transcript=hg002_chrY_paternal_36.5;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.5,hg002_chrY_paternal_36.5;transcript_id=NA19239_ch_T0000115;gene_id=NA19239_ch_G0000029;Parent=NA19239_ch_T0000115;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:NA19239_ch_T0000115:0;Name=LOC101928092;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2269469	2269603	.	-	.	source_transcript=hg002_chrY_paternal_36.5;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.5,hg002_chrY_paternal_36.5;transcript_id=NA19239_ch_T0000115;gene_id=NA19239_ch_G0000029;Parent=NA19239_ch_T0000115;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:NA19239_ch_T0000115:1;Name=LOC101928092;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	2269554	2269615	.	+	.	source_gene_common_name=MIR6089;source_gene=hg002_chrY_paternal_37;alternative_source_transcripts=hg002_chrY_paternal_37.1,hg002_chrY_paternal_37.1;gene_id=NA19239_ch_G0000030;gene_biotype=miRNA;gene_name=MIR6089;gene_sources=liftoff;ID=NA19239_ch_G0000030;Name=MIR6089
NA19239_chrY	CAT	transcript	2269554	2269617	1000	+	.	source_transcript=hg002_chrY_paternal_37.1;source_transcript_name=hg002_chrY_paternal_37.1;source_gene=hg002_chrY_paternal_37;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_37;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_37.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_37.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=hg002_chrY_paternal_37.1,hg002_chrY_paternal_37.1;transcript_id=NA19239_ch_T0000116;gene_id=NA19239_ch_G0000030;Parent=NA19239_ch_G0000030;transcript_name=hg002_chrY_paternal_37.1;gene_name=MIR6089;ID=NA19239_ch_T0000116;Name=MIR6089
NA19239_chrY	CAT	exon	2269554	2269617	.	+	.	source_transcript=hg002_chrY_paternal_37.1;source_transcript_name=hg002_chrY_paternal_37.1;source_gene=hg002_chrY_paternal_37;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_37;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_37.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_37.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=hg002_chrY_paternal_37.1,hg002_chrY_paternal_37.1;transcript_id=NA19239_ch_T0000116;gene_id=NA19239_ch_G0000030;Parent=NA19239_ch_T0000116;transcript_name=hg002_chrY_paternal_37.1;gene_name=MIR6089;ID=exon:NA19239_ch_T0000116:0;Name=MIR6089;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	2269592	2269615	1000	+	.	source_transcript=hg002_chrY_paternal_37.2;source_transcript_name=hg002_chrY_paternal_37.1;source_gene=hg002_chrY_paternal_37;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_37;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_37.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_37.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=hg002_chrY_paternal_37.2,hg002_chrY_paternal_37.2;transcript_id=NA19239_ch_T0000117;gene_id=NA19239_ch_G0000030;Parent=NA19239_ch_G0000030;transcript_name=hg002_chrY_paternal_37.1;gene_name=MIR6089;ID=NA19239_ch_T0000117;Name=MIR6089
NA19239_chrY	CAT	exon	2269592	2269615	.	+	.	source_transcript=hg002_chrY_paternal_37.2;source_transcript_name=hg002_chrY_paternal_37.1;source_gene=hg002_chrY_paternal_37;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_37;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_37.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_37.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=hg002_chrY_paternal_37.2,hg002_chrY_paternal_37.2;transcript_id=NA19239_ch_T0000117;gene_id=NA19239_ch_G0000030;Parent=NA19239_ch_T0000117;transcript_name=hg002_chrY_paternal_37.1;gene_name=MIR6089;ID=exon:NA19239_ch_T0000117:0;Name=MIR6089;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	2269628	2317881	.	+	.	source_gene_common_name=CD99P1;source_gene=hg002_chrY_paternal_38;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;gene_id=NA19239_ch_G0000031;gene_biotype=transcribed_pseudogene;gene_name=CD99P1;gene_sources=liftoff;ID=NA19239_ch_G0000031;Name=CD99P1
NA19239_chrY	CAT	transcript	2269628	2298960	1000	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19239_ch_T0000118;gene_id=NA19239_ch_G0000031;Parent=NA19239_ch_G0000031;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=NA19239_ch_T0000118;Name=CD99P1
NA19239_chrY	CAT	exon	2269628	2269832	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19239_ch_T0000118;gene_id=NA19239_ch_G0000031;Parent=NA19239_ch_T0000118;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:NA19239_ch_T0000118:0;Name=CD99P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2269833	2271328	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19239_ch_T0000118;gene_id=NA19239_ch_G0000031;Parent=NA19239_ch_T0000118;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:NA19239_ch_T0000118:0;Name=CD99P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2271329	2271371	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19239_ch_T0000118;gene_id=NA19239_ch_G0000031;Parent=NA19239_ch_T0000118;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:NA19239_ch_T0000118:1;Name=CD99P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2271372	2272488	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19239_ch_T0000118;gene_id=NA19239_ch_G0000031;Parent=NA19239_ch_T0000118;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:NA19239_ch_T0000118:1;Name=CD99P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2272489	2272557	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19239_ch_T0000118;gene_id=NA19239_ch_G0000031;Parent=NA19239_ch_T0000118;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:NA19239_ch_T0000118:2;Name=CD99P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2272558	2276153	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19239_ch_T0000118;gene_id=NA19239_ch_G0000031;Parent=NA19239_ch_T0000118;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:NA19239_ch_T0000118:2;Name=CD99P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2276154	2276307	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19239_ch_T0000118;gene_id=NA19239_ch_G0000031;Parent=NA19239_ch_T0000118;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:NA19239_ch_T0000118:3;Name=CD99P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2276308	2279077	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19239_ch_T0000118;gene_id=NA19239_ch_G0000031;Parent=NA19239_ch_T0000118;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:NA19239_ch_T0000118:3;Name=CD99P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2279078	2279122	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19239_ch_T0000118;gene_id=NA19239_ch_G0000031;Parent=NA19239_ch_T0000118;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:NA19239_ch_T0000118:4;Name=CD99P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2279123	2279766	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19239_ch_T0000118;gene_id=NA19239_ch_G0000031;Parent=NA19239_ch_T0000118;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:NA19239_ch_T0000118:4;Name=CD99P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2279767	2279835	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19239_ch_T0000118;gene_id=NA19239_ch_G0000031;Parent=NA19239_ch_T0000118;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:NA19239_ch_T0000118:5;Name=CD99P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2279836	2283030	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19239_ch_T0000118;gene_id=NA19239_ch_G0000031;Parent=NA19239_ch_T0000118;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:NA19239_ch_T0000118:5;Name=CD99P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2283031	2283075	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19239_ch_T0000118;gene_id=NA19239_ch_G0000031;Parent=NA19239_ch_T0000118;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:NA19239_ch_T0000118:6;Name=CD99P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2283076	2283725	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19239_ch_T0000118;gene_id=NA19239_ch_G0000031;Parent=NA19239_ch_T0000118;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:NA19239_ch_T0000118:6;Name=CD99P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2283726	2283794	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19239_ch_T0000118;gene_id=NA19239_ch_G0000031;Parent=NA19239_ch_T0000118;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:NA19239_ch_T0000118:7;Name=CD99P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2283795	2286942	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19239_ch_T0000118;gene_id=NA19239_ch_G0000031;Parent=NA19239_ch_T0000118;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:NA19239_ch_T0000118:7;Name=CD99P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2286943	2286988	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19239_ch_T0000118;gene_id=NA19239_ch_G0000031;Parent=NA19239_ch_T0000118;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:NA19239_ch_T0000118:8;Name=CD99P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2286989	2298604	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19239_ch_T0000118;gene_id=NA19239_ch_G0000031;Parent=NA19239_ch_T0000118;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:NA19239_ch_T0000118:8;Name=CD99P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2298605	2298960	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19239_ch_T0000118;gene_id=NA19239_ch_G0000031;Parent=NA19239_ch_T0000118;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:NA19239_ch_T0000118:9;Name=CD99P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	2269628	2317881	1000	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=NA19239_ch_T0000119;gene_id=NA19239_ch_G0000031;Parent=NA19239_ch_G0000031;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=NA19239_ch_T0000119;Name=CD99P1
NA19239_chrY	CAT	exon	2269628	2269832	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=NA19239_ch_T0000119;gene_id=NA19239_ch_G0000031;Parent=NA19239_ch_T0000119;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:NA19239_ch_T0000119:0;Name=CD99P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2269833	2271328	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=NA19239_ch_T0000119;gene_id=NA19239_ch_G0000031;Parent=NA19239_ch_T0000119;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:NA19239_ch_T0000119:0;Name=CD99P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2271329	2271371	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=NA19239_ch_T0000119;gene_id=NA19239_ch_G0000031;Parent=NA19239_ch_T0000119;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:NA19239_ch_T0000119:1;Name=CD99P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2271372	2272488	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=NA19239_ch_T0000119;gene_id=NA19239_ch_G0000031;Parent=NA19239_ch_T0000119;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:NA19239_ch_T0000119:1;Name=CD99P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2272489	2272557	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=NA19239_ch_T0000119;gene_id=NA19239_ch_G0000031;Parent=NA19239_ch_T0000119;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:NA19239_ch_T0000119:2;Name=CD99P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2272558	2276153	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=NA19239_ch_T0000119;gene_id=NA19239_ch_G0000031;Parent=NA19239_ch_T0000119;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:NA19239_ch_T0000119:2;Name=CD99P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2276154	2276307	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=NA19239_ch_T0000119;gene_id=NA19239_ch_G0000031;Parent=NA19239_ch_T0000119;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:NA19239_ch_T0000119:3;Name=CD99P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2276308	2279077	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=NA19239_ch_T0000119;gene_id=NA19239_ch_G0000031;Parent=NA19239_ch_T0000119;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:NA19239_ch_T0000119:3;Name=CD99P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2279078	2279122	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=NA19239_ch_T0000119;gene_id=NA19239_ch_G0000031;Parent=NA19239_ch_T0000119;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:NA19239_ch_T0000119:4;Name=CD99P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2279123	2279766	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=NA19239_ch_T0000119;gene_id=NA19239_ch_G0000031;Parent=NA19239_ch_T0000119;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:NA19239_ch_T0000119:4;Name=CD99P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2279767	2279835	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=NA19239_ch_T0000119;gene_id=NA19239_ch_G0000031;Parent=NA19239_ch_T0000119;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:NA19239_ch_T0000119:5;Name=CD99P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2279836	2283725	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=NA19239_ch_T0000119;gene_id=NA19239_ch_G0000031;Parent=NA19239_ch_T0000119;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:NA19239_ch_T0000119:5;Name=CD99P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2283726	2283794	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=NA19239_ch_T0000119;gene_id=NA19239_ch_G0000031;Parent=NA19239_ch_T0000119;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:NA19239_ch_T0000119:6;Name=CD99P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2283795	2286942	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=NA19239_ch_T0000119;gene_id=NA19239_ch_G0000031;Parent=NA19239_ch_T0000119;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:NA19239_ch_T0000119:6;Name=CD99P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2286943	2286988	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=NA19239_ch_T0000119;gene_id=NA19239_ch_G0000031;Parent=NA19239_ch_T0000119;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:NA19239_ch_T0000119:7;Name=CD99P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2286989	2315678	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=NA19239_ch_T0000119;gene_id=NA19239_ch_G0000031;Parent=NA19239_ch_T0000119;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:NA19239_ch_T0000119:7;Name=CD99P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2315679	2317881	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=NA19239_ch_T0000119;gene_id=NA19239_ch_G0000031;Parent=NA19239_ch_T0000119;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:NA19239_ch_T0000119:8;Name=CD99P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	2273330	2275685	.	-	.	source_gene_common_name=LINC00102;source_gene=hg002_chrY_paternal_39;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;gene_id=NA19239_ch_G0000032;gene_biotype=lncRNA;gene_name=LINC00102;gene_sources=liftoff;ID=NA19239_ch_G0000032;Name=LINC00102
NA19239_chrY	CAT	transcript	2273330	2275685	1000	-	.	source_transcript=hg002_chrY_paternal_39.1;source_transcript_name=hg002_chrY_paternal_39.1;source_gene=hg002_chrY_paternal_39;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_39;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_39.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_39.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;transcript_id=NA19239_ch_T0000120;gene_id=NA19239_ch_G0000032;Parent=NA19239_ch_G0000032;transcript_name=hg002_chrY_paternal_39.1;gene_name=LINC00102;ID=NA19239_ch_T0000120;Name=LINC00102
NA19239_chrY	CAT	exon	2273330	2274035	.	-	.	source_transcript=hg002_chrY_paternal_39.1;source_transcript_name=hg002_chrY_paternal_39.1;source_gene=hg002_chrY_paternal_39;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_39;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_39.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_39.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;transcript_id=NA19239_ch_T0000120;gene_id=NA19239_ch_G0000032;Parent=NA19239_ch_T0000120;transcript_name=hg002_chrY_paternal_39.1;gene_name=LINC00102;ID=exon:NA19239_ch_T0000120:0;Name=LINC00102;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2274036	2275054	.	-	.	source_transcript=hg002_chrY_paternal_39.1;source_transcript_name=hg002_chrY_paternal_39.1;source_gene=hg002_chrY_paternal_39;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_39;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_39.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_39.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;transcript_id=NA19239_ch_T0000120;gene_id=NA19239_ch_G0000032;Parent=NA19239_ch_T0000120;transcript_name=hg002_chrY_paternal_39.1;gene_name=LINC00102;ID=intron:NA19239_ch_T0000120:0;Name=LINC00102;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2275055	2275685	.	-	.	source_transcript=hg002_chrY_paternal_39.1;source_transcript_name=hg002_chrY_paternal_39.1;source_gene=hg002_chrY_paternal_39;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_39;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_39.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_39.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;transcript_id=NA19239_ch_T0000120;gene_id=NA19239_ch_G0000032;Parent=NA19239_ch_T0000120;transcript_name=hg002_chrY_paternal_39.1;gene_name=LINC00102;ID=exon:NA19239_ch_T0000120:1;Name=LINC00102;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	2351558	2402191	.	+	.	source_gene_common_name=CD99;source_gene=hg002_chrY_paternal_40;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;gene_id=NA19239_ch_G0000033;gene_biotype=protein_coding;gene_name=CD99;gene_sources=liftoff,augTM;ID=NA19239_ch_G0000033;Name=CD99
NA19239_chrY	CAT	transcript	2351558	2397314	100	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000121;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=NA19239_ch_T0000121;Name=CD99
NA19239_chrY	CAT	exon	2351558	2351690	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000121;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000121:0;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2351624	2351690	.	+	0	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000121;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000121:0;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	2351624	2351626	.	+	0	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000121;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:NA19239_ch_T0000121;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2351691	2374702	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000121;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000121:0;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2374703	2374735	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000121;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000121:1;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2374703	2374735	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000121;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000121:1;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2374736	2377886	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000121;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000121:1;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2377887	2377934	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000121;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000121:2;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2377887	2377934	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000121;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000121:2;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2377935	2379940	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000121;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000121:2;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2379941	2379985	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000121;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000121:3;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2379941	2379985	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000121;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000121:3;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2379986	2380635	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000121;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000121:3;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2380636	2380704	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000121;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000121:4;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2380636	2380704	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000121;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000121:4;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2380705	2382905	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000121;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000121:4;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2382906	2382953	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000121;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000121:5;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2382906	2382953	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000121;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000121:5;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2382954	2383592	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000121;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000121:5;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2383593	2383643	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000121;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000121:6;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2383593	2383643	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000121;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000121:6;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2383644	2387129	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000121;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000121:6;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2387130	2387243	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000121;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000121:7;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2387130	2387243	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000121;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000121:7;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2387244	2394234	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000121;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000121:7;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2394235	2397314	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000121;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000121:8;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2394235	2394242	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000121;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000121:8;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	2394240	2394242	.	+	0	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000121;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000121;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:NA19239_ch_T0000121;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	2351558	2402191	100	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000122;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=NA19239_ch_T0000122;Name=CD99
NA19239_chrY	CAT	exon	2351558	2351690	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000122;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000122:0;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2351624	2351690	.	+	0	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000122;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000122:0;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	2351624	2351626	.	+	0	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000122;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:NA19239_ch_T0000122;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2351691	2374702	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000122;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000122:0;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2374703	2374735	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000122;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000122:1;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2374703	2374735	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000122;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000122:1;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2374736	2379940	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000122;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000122:1;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2379941	2379985	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000122;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000122:2;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2379941	2379985	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000122;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000122:2;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2379986	2380635	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000122;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000122:2;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2380636	2380704	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000122;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000122:3;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2380636	2380704	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000122;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000122:3;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2380705	2382905	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000122;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000122:3;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2382906	2382953	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000122;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000122:4;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2382906	2382953	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000122;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000122:4;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2382954	2383592	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000122;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000122:4;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2383593	2383643	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000122;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000122:5;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2383593	2383643	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000122;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000122:5;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2383644	2387129	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000122;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000122:5;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2387130	2387243	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000122;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000122:6;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2387130	2387243	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000122;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000122:6;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2387244	2399081	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000122;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000122:6;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2399082	2399138	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000122;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000122:7;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2399082	2399138	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000122;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000122:7;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2399139	2401659	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000122;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000122:7;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2401660	2402191	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000122;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000122:8;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2401660	2401685	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000122;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000122:8;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	2401683	2401685	.	+	0	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000122;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000122;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:NA19239_ch_T0000122;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	2351558	2402191	100	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000123;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=NA19239_ch_T0000123;Name=CD99
NA19239_chrY	CAT	exon	2351558	2351690	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000123;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000123:0;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2351624	2351690	.	+	0	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000123;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000123:0;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	2351624	2351626	.	+	0	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000123;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:NA19239_ch_T0000123;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2351691	2374702	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000123;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000123:0;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2374703	2374735	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000123;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000123:1;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2374703	2374735	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000123;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000123:1;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2374736	2377886	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000123;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000123:1;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2377887	2377934	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000123;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000123:2;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2377887	2377934	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000123;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000123:2;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2377935	2379940	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000123;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000123:2;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2379941	2379985	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000123;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000123:3;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2379941	2379985	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000123;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000123:3;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2379986	2380635	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000123;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000123:3;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2380636	2380704	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000123;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000123:4;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2380636	2380704	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000123;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000123:4;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2380705	2382905	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000123;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000123:4;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2382906	2382953	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000123;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000123:5;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2382906	2382953	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000123;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000123:5;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2382954	2383592	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000123;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000123:5;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2383593	2383643	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000123;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000123:6;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2383593	2383643	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000123;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000123:6;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2383644	2387129	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000123;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000123:6;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2387130	2387243	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000123;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000123:7;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2387130	2387243	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000123;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000123:7;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2387244	2399084	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000123;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000123:7;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2399085	2399138	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000123;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000123:8;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2399085	2399138	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000123;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000123:8;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2399139	2401659	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000123;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000123:8;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2401660	2402191	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000123;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000123:9;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2401660	2401685	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000123;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000123:9;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	2401683	2401685	.	+	0	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000123;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000123;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:NA19239_ch_T0000123;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	2351558	2402191	100	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000124;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=NA19239_ch_T0000124;Name=CD99
NA19239_chrY	CAT	exon	2351558	2351690	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000124;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000124:0;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2351624	2351690	.	+	0	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000124;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000124:0;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	2351624	2351626	.	+	0	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000124;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:NA19239_ch_T0000124;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2351691	2374702	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000124;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000124:0;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2374703	2374735	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000124;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000124:1;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2374703	2374735	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000124;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000124:1;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2374736	2379940	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000124;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000124:1;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2379941	2379985	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000124;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000124:2;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2379941	2379985	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000124;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000124:2;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2379986	2380635	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000124;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000124:2;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2380636	2380704	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000124;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000124:3;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2380636	2380704	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000124;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000124:3;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2380705	2382905	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000124;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000124:3;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2382906	2382953	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000124;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000124:4;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2382906	2382953	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000124;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000124:4;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2382954	2383592	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000124;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000124:4;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2383593	2383643	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000124;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000124:5;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2383593	2383643	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000124;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000124:5;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2383644	2387129	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000124;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000124:5;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2387130	2387243	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000124;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000124:6;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2387130	2387243	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000124;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000124:6;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2387244	2399084	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000124;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000124:6;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2399085	2399138	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000124;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000124:7;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2399085	2399138	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000124;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000124:7;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2399139	2401659	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000124;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000124:7;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2401660	2402191	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000124;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000124:8;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2401660	2401685	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000124;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000124:8;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	2401683	2401685	.	+	0	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000124;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000124;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:NA19239_ch_T0000124;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	2351558	2402191	100	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000125;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=NA19239_ch_T0000125;Name=CD99
NA19239_chrY	CAT	exon	2351558	2351690	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000125;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000125:0;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2351624	2351690	.	+	0	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000125;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000125:0;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	2351624	2351626	.	+	0	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000125;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:NA19239_ch_T0000125;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2351691	2374702	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000125;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000125:0;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2374703	2374735	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000125;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000125:1;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2374703	2374735	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000125;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000125:1;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2374736	2377886	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000125;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000125:1;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2377887	2377934	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000125;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000125:2;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2377887	2377934	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000125;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000125:2;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2377935	2379940	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000125;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000125:2;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2379941	2379985	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000125;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000125:3;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2379941	2379985	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000125;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000125:3;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2379986	2380635	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000125;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000125:3;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2380636	2380704	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000125;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000125:4;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2380636	2380704	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000125;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000125:4;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2380705	2382905	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000125;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000125:4;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2382906	2382953	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000125;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000125:5;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2382906	2382953	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000125;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000125:5;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2382954	2387129	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000125;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000125:5;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2387130	2387243	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000125;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000125:6;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2387130	2387243	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000125;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000125:6;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2387244	2399081	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000125;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000125:6;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2399082	2399138	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000125;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000125:7;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2399082	2399138	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000125;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000125:7;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2399139	2401659	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000125;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000125:7;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2401660	2402191	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000125;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000125:8;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2401660	2401685	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000125;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000125:8;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	2401683	2401685	.	+	0	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000125;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000125;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:NA19239_ch_T0000125;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	2351558	2402191	100	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000126;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=NA19239_ch_T0000126;Name=CD99
NA19239_chrY	CAT	exon	2351558	2351690	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000126;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000126;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000126:0;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2351624	2351690	.	+	0	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000126;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000126;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000126:0;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	2351624	2351626	.	+	0	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000126;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000126;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:NA19239_ch_T0000126;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2351691	2374702	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000126;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000126;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000126:0;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2374703	2374735	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000126;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000126;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000126:1;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2374703	2374735	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000126;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000126;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000126:1;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2374736	2377886	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000126;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000126;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000126:1;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2377887	2377934	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000126;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000126;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000126:2;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2377887	2377934	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000126;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000126;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000126:2;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2377935	2379940	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000126;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000126;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000126:2;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2379941	2379985	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000126;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000126;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000126:3;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2379941	2379985	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000126;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000126;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000126:3;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2379986	2380635	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000126;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000126;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000126:3;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2380636	2380704	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000126;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000126;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000126:4;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2380636	2380704	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000126;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000126;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000126:4;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2380705	2382905	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000126;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000126;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000126:4;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2382906	2382953	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000126;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000126;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000126:5;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2382906	2382953	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000126;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000126;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000126:5;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2382954	2383592	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000126;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000126;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000126:5;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2383593	2383643	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000126;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000126;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000126:6;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2383593	2383643	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000126;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000126;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000126:6;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2383644	2387129	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000126;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000126;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000126:6;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2387130	2387243	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000126;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000126;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000126:7;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2387130	2387243	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000126;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000126;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000126:7;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2387244	2399081	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000126;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000126;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000126:7;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2399082	2399138	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000126;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000126;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000126:8;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2399082	2399138	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000126;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000126;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000126:8;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2399139	2401659	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000126;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000126;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19239_ch_T0000126:8;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2401660	2402191	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000126;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000126;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19239_ch_T0000126:9;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2401660	2401685	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000126;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000126;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19239_ch_T0000126:9;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	2401683	2401685	.	+	0	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000126;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000126;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:NA19239_ch_T0000126;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	2351558	2402191	1000	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000127;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_G0000033;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=NA19239_ch_T0000127;Name=CD99
NA19239_chrY	CAT	exon	2351558	2351690	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000127;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000127;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:NA19239_ch_T0000127:0;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2351691	2374702	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000127;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000127;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:NA19239_ch_T0000127:0;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2374703	2374735	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000127;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000127;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:NA19239_ch_T0000127:1;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2374736	2377886	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000127;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000127;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:NA19239_ch_T0000127:1;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2377887	2377934	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000127;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000127;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:NA19239_ch_T0000127:2;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2377935	2379940	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000127;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000127;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:NA19239_ch_T0000127:2;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2379941	2379985	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000127;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000127;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:NA19239_ch_T0000127:3;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2379986	2380635	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000127;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000127;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:NA19239_ch_T0000127:3;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2380636	2380704	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000127;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000127;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:NA19239_ch_T0000127:4;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2380705	2382905	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000127;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000127;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:NA19239_ch_T0000127:4;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2382906	2382953	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000127;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000127;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:NA19239_ch_T0000127:5;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2382954	2383592	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000127;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000127;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:NA19239_ch_T0000127:5;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2383593	2383643	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000127;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000127;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:NA19239_ch_T0000127:6;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2383644	2387129	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000127;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000127;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:NA19239_ch_T0000127:6;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2387130	2387243	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000127;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000127;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:NA19239_ch_T0000127:7;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2387244	2394234	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000127;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000127;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:NA19239_ch_T0000127:7;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2394235	2394252	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000127;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000127;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:NA19239_ch_T0000127:8;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2394253	2399084	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000127;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000127;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:NA19239_ch_T0000127:8;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2399085	2399138	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000127;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000127;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:NA19239_ch_T0000127:9;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2399139	2401659	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000127;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000127;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:NA19239_ch_T0000127:9;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2401660	2402191	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000127;gene_id=NA19239_ch_G0000033;Parent=NA19239_ch_T0000127;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:NA19239_ch_T0000127:10;Name=CD99;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	2413181	2435739	.	+	.	source_gene_common_name=XGY2;source_gene=hg002_chrY_paternal_41;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;gene_id=NA19239_ch_G0000034;gene_biotype=transcribed_pseudogene;gene_name=XGY2;gene_sources=liftoff;ID=NA19239_ch_G0000034;Name=XGY2
NA19239_chrY	CAT	transcript	2413181	2435739	1000	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=NA19239_ch_T0000128;gene_id=NA19239_ch_G0000034;Parent=NA19239_ch_G0000034;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=NA19239_ch_T0000128;Name=XGY2
NA19239_chrY	CAT	exon	2413181	2413220	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=NA19239_ch_T0000128;gene_id=NA19239_ch_G0000034;Parent=NA19239_ch_T0000128;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=exon:NA19239_ch_T0000128:0;Name=XGY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2413221	2431456	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=NA19239_ch_T0000128;gene_id=NA19239_ch_G0000034;Parent=NA19239_ch_T0000128;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=intron:NA19239_ch_T0000128:0;Name=XGY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2431457	2431498	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=NA19239_ch_T0000128;gene_id=NA19239_ch_G0000034;Parent=NA19239_ch_T0000128;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=exon:NA19239_ch_T0000128:1;Name=XGY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2431499	2435458	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=NA19239_ch_T0000128;gene_id=NA19239_ch_G0000034;Parent=NA19239_ch_T0000128;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=intron:NA19239_ch_T0000128:1;Name=XGY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2435459	2435739	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=NA19239_ch_T0000128;gene_id=NA19239_ch_G0000034;Parent=NA19239_ch_T0000128;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=exon:NA19239_ch_T0000128:2;Name=XGY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	2447594	2448421	.	-	.	source_gene_common_name=SRY;source_gene=hg002_chrY_paternal_43;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;gene_id=NA19239_ch_G0000035;gene_biotype=protein_coding;gene_name=SRY;gene_sources=liftoff,augTM;ID=NA19239_ch_G0000035;Name=SRY
NA19239_chrY	CAT	transcript	2447594	2448421	100	-	.	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000129;gene_id=NA19239_ch_G0000035;Parent=NA19239_ch_G0000035;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=NA19239_ch_T0000129;Name=SRY
NA19239_chrY	CAT	exon	2447594	2448421	.	-	.	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000129;gene_id=NA19239_ch_G0000035;Parent=NA19239_ch_T0000129;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=exon:NA19239_ch_T0000129:0;Name=SRY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2447728	2448342	.	-	0	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000129;gene_id=NA19239_ch_G0000035;Parent=NA19239_ch_T0000129;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=CDS:NA19239_ch_T0000129:0;Name=SRY;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	2447728	2447730	.	-	0	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000129;gene_id=NA19239_ch_G0000035;Parent=NA19239_ch_T0000129;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=stop_codon:NA19239_ch_T0000129;Name=SRY;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	2448340	2448342	.	-	0	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000129;gene_id=NA19239_ch_G0000035;Parent=NA19239_ch_T0000129;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=start_codon:NA19239_ch_T0000129;Name=SRY;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	2502335	2528001	.	+	.	source_gene_common_name=RPS4Y1;source_gene=hg002_chrY_paternal_46;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;gene_id=NA19239_ch_G0000036;gene_biotype=protein_coding;gene_name=RPS4Y1;gene_sources=liftoff,augTM;ID=NA19239_ch_G0000036;Name=RPS4Y1
NA19239_chrY	CAT	transcript	2502335	2528001	100	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000130;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_G0000036;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=NA19239_ch_T0000130;Name=RPS4Y1
NA19239_chrY	CAT	exon	2502335	2502360	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000130;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:NA19239_ch_T0000130:0;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2502358	2502360	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000130;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:NA19239_ch_T0000130:0;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	2502358	2502360	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000130;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=start_codon:NA19239_ch_T0000130;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2502361	2502897	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000130;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:NA19239_ch_T0000130:0;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2502898	2502975	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000130;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:NA19239_ch_T0000130:1;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2502898	2502975	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000130;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:NA19239_ch_T0000130:1;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2502976	2504809	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000130;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:NA19239_ch_T0000130:1;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2504810	2504990	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000130;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:NA19239_ch_T0000130:2;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2504810	2504990	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000130;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:NA19239_ch_T0000130:2;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2504991	2506378	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000130;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:NA19239_ch_T0000130:2;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2506379	2506476	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000130;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:NA19239_ch_T0000130:3;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2506379	2506476	.	+	2	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000130;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:NA19239_ch_T0000130:3;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2506477	2515332	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000130;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:NA19239_ch_T0000130:3;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2515333	2515504	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000130;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:NA19239_ch_T0000130:4;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2515333	2515504	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000130;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:NA19239_ch_T0000130:4;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2515505	2525820	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000130;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:NA19239_ch_T0000130:4;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2525821	2525978	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000130;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:NA19239_ch_T0000130:5;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2525821	2525978	.	+	2	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000130;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:NA19239_ch_T0000130:5;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2525979	2527525	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000130;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:NA19239_ch_T0000130:5;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2527526	2528001	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000130;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:NA19239_ch_T0000130:6;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2527526	2527627	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000130;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:NA19239_ch_T0000130:6;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	2527625	2527627	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000130;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000130;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=stop_codon:NA19239_ch_T0000130;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	2502335	2528001	100	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000131;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_G0000036;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=NA19239_ch_T0000131;Name=RPS4Y1
NA19239_chrY	CAT	exon	2502335	2502706	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000131;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000131;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:NA19239_ch_T0000131:0;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2502677	2502706	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000131;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000131;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:NA19239_ch_T0000131:0;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	2502677	2502679	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000131;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000131;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=start_codon:NA19239_ch_T0000131;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2502707	2502897	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000131;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000131;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:NA19239_ch_T0000131:0;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2502898	2502975	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000131;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000131;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:NA19239_ch_T0000131:1;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2502898	2502975	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000131;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000131;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:NA19239_ch_T0000131:1;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2502976	2504809	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000131;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000131;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:NA19239_ch_T0000131:1;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2504810	2504990	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000131;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000131;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:NA19239_ch_T0000131:2;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2504810	2504990	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000131;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000131;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:NA19239_ch_T0000131:2;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2504991	2506378	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000131;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000131;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:NA19239_ch_T0000131:2;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2506379	2506476	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000131;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000131;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:NA19239_ch_T0000131:3;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2506379	2506476	.	+	2	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000131;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000131;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:NA19239_ch_T0000131:3;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2506477	2515332	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000131;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000131;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:NA19239_ch_T0000131:3;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2515333	2515504	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000131;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000131;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:NA19239_ch_T0000131:4;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2515333	2515504	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000131;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000131;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:NA19239_ch_T0000131:4;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2515505	2525820	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000131;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000131;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:NA19239_ch_T0000131:4;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2525821	2525978	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000131;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000131;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:NA19239_ch_T0000131:5;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2525821	2525978	.	+	2	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000131;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000131;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:NA19239_ch_T0000131:5;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2525979	2527525	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000131;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000131;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:NA19239_ch_T0000131:5;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2527526	2528001	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000131;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000131;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:NA19239_ch_T0000131:6;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2527526	2527627	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000131;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000131;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:NA19239_ch_T0000131:6;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	2527625	2527627	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000131;gene_id=NA19239_ch_G0000036;Parent=NA19239_ch_T0000131;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=stop_codon:NA19239_ch_T0000131;Name=RPS4Y1;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	2596466	2643575	.	+	.	source_gene_common_name=ZFY;source_gene=hg002_chrY_paternal_49;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;gene_id=NA19239_ch_G0000037;gene_biotype=protein_coding;gene_name=ZFY;gene_sources=liftoff,augTM;ID=NA19239_ch_G0000037;Name=ZFY
NA19239_chrY	CAT	transcript	2596466	2643575	100	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000132;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=NA19239_ch_T0000132;Name=ZFY
NA19239_chrY	CAT	exon	2596466	2596854	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000132;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000132:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2596855	2622142	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000132;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000132:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2622143	2622715	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000132;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000132:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2622160	2622715	.	+	0	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000132;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000132:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	2622160	2622162	.	+	0	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000132;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:NA19239_ch_T0000132;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2622716	2636162	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000132;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000132:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2636163	2636312	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000132;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000132:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2636163	2636312	.	+	2	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000132;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000132:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2636313	2636578	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000132;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000132:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2636579	2636722	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000132;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000132:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2636579	2636722	.	+	2	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000132;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000132:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2636723	2639008	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000132;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000132:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2639009	2639149	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000132;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000132:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2639009	2639149	.	+	2	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000132;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000132:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2639150	2639878	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000132;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000132:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2639879	2643575	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000132;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000132:5;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2639879	2641062	.	+	2	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000132;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000132:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	2641060	2641062	.	+	0	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000132;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000132;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:NA19239_ch_T0000132;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	2596466	2643575	100	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000133;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=NA19239_ch_T0000133;Name=ZFY
NA19239_chrY	CAT	exon	2596466	2596531	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000133;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000133:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2596532	2614977	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000133;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000133:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2614978	2615066	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000133;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000133:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2615006	2615066	.	+	0	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000133;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000133:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	2615006	2615008	.	+	0	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000133;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:NA19239_ch_T0000133;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2615067	2636162	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000133;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000133:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2636163	2636312	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000133;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000133:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2636163	2636312	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000133;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000133:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2636313	2636578	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000133;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000133:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2636579	2636722	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000133;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000133:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2636579	2636722	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000133;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000133:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2636723	2637737	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000133;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000133:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2637738	2637890	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000133;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000133:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2637738	2637890	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000133;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000133:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2637891	2639008	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000133;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000133:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2639009	2639149	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000133;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000133:5;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2639009	2639149	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000133;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000133:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2639150	2639878	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000133;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000133:5;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2639879	2643575	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000133;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000133:6;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2639879	2641062	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000133;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000133:5;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	2641060	2641062	.	+	0	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000133;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000133;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:NA19239_ch_T0000133;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	2596466	2643575	100	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000134;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=NA19239_ch_T0000134;Name=ZFY
NA19239_chrY	CAT	exon	2596466	2596531	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000134;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000134:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2596532	2614977	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000134;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000134:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2614978	2615066	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000134;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000134:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2615006	2615066	.	+	0	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000134;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000134:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	2615006	2615008	.	+	0	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000134;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:NA19239_ch_T0000134;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2615067	2622142	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000134;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000134:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2622143	2622715	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000134;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000134:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2622143	2622715	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000134;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000134:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2622716	2636162	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000134;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000134:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2636163	2636312	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000134;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000134:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2636163	2636312	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000134;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000134:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2636313	2636578	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000134;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000134:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2636579	2636722	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000134;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000134:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2636579	2636722	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000134;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000134:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2636723	2637737	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000134;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000134:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2637738	2637890	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000134;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000134:5;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2637738	2637890	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000134;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000134:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2637891	2639008	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000134;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000134:5;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2639009	2639149	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000134;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000134:6;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2639009	2639149	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000134;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000134:5;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2639150	2639878	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000134;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000134:6;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2639879	2643575	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000134;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000134:7;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2639879	2641062	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000134;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000134:6;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	2641060	2641062	.	+	0	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000134;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000134;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:NA19239_ch_T0000134;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	2596466	2643575	100	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000135;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=NA19239_ch_T0000135;Name=ZFY
NA19239_chrY	CAT	exon	2596466	2596854	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000135;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000135:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2596855	2622142	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000135;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000135:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2622143	2622715	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000135;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000135:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2622160	2622715	.	+	0	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000135;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000135:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	2622160	2622162	.	+	0	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000135;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:NA19239_ch_T0000135;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2622716	2636162	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000135;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000135:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2636163	2636312	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000135;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000135:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2636163	2636312	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000135;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000135:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2636313	2636578	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000135;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000135:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2636579	2636722	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000135;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000135:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2636579	2636722	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000135;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000135:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2636723	2637737	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000135;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000135:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2637738	2637890	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000135;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000135:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2637738	2637890	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000135;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000135:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2637891	2639008	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000135;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000135:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2639009	2639149	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000135;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000135:5;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2639009	2639149	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000135;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000135:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2639150	2639878	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000135;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000135:5;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2639879	2643575	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000135;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000135:6;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2639879	2641062	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000135;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000135:5;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	2641060	2641062	.	+	0	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000135;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000135;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:NA19239_ch_T0000135;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	2596466	2643575	100	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000136;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=NA19239_ch_T0000136;Name=ZFY
NA19239_chrY	CAT	exon	2596466	2596531	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000136;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000136:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2596532	2622142	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000136;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000136:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2622143	2622715	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000136;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000136:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2622160	2622715	.	+	0	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000136;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000136:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	2622160	2622162	.	+	0	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000136;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:NA19239_ch_T0000136;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2622716	2636162	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000136;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000136:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2636163	2636312	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000136;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000136:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2636163	2636312	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000136;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000136:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2636313	2636578	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000136;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000136:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2636579	2636722	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000136;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000136:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2636579	2636722	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000136;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000136:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2636723	2637737	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000136;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000136:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2637738	2637890	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000136;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000136:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2637738	2637890	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000136;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000136:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2637891	2639008	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000136;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000136:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2639009	2639149	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000136;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000136:5;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2639009	2639149	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000136;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000136:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2639150	2639878	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000136;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000136:5;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2639879	2643575	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000136;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000136:6;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2639879	2641062	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000136;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000136:5;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	2641060	2641062	.	+	0	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000136;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000136;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:NA19239_ch_T0000136;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	2596466	2643575	100	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000137;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=NA19239_ch_T0000137;Name=ZFY
NA19239_chrY	CAT	exon	2596466	2596720	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000137;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000137:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2596721	2622142	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000137;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000137:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2622143	2622715	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000137;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000137:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2622160	2622715	.	+	0	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000137;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000137:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	2622160	2622162	.	+	0	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000137;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:NA19239_ch_T0000137;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2622716	2636162	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000137;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000137:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2636163	2636312	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000137;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000137:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2636163	2636312	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000137;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000137:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2636313	2636578	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000137;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000137:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2636579	2636722	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000137;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000137:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2636579	2636722	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000137;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000137:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2636723	2637737	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000137;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000137:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2637738	2637890	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000137;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000137:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2637738	2637890	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000137;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000137:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2637891	2639008	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000137;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000137:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2639009	2639149	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000137;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000137:5;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2639009	2639149	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000137;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000137:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2639150	2639878	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000137;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000137:5;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2639879	2643575	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000137;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000137:6;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2639879	2641062	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000137;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000137:5;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	2641060	2641062	.	+	0	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000137;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000137;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:NA19239_ch_T0000137;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	2596466	2643575	100	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000138;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=NA19239_ch_T0000138;Name=ZFY
NA19239_chrY	CAT	exon	2596466	2596854	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000138;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000138:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2596855	2614977	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000138;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000138:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2614978	2615066	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000138;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000138:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2615006	2615066	.	+	0	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000138;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000138:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	2615006	2615008	.	+	0	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000138;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:NA19239_ch_T0000138;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2615067	2622142	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000138;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000138:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2622143	2622715	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000138;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000138:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2622143	2622715	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000138;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000138:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2622716	2636162	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000138;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000138:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2636163	2636312	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000138;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000138:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2636163	2636312	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000138;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000138:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2636313	2636578	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000138;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000138:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2636579	2636722	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000138;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000138:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2636579	2636722	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000138;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000138:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2636723	2639008	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000138;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000138:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2639009	2639149	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000138;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000138:5;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2639009	2639149	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000138;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000138:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2639150	2639878	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000138;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000138:5;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2639879	2643575	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000138;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000138:6;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2639879	2641062	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000138;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000138:5;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	2641060	2641062	.	+	0	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000138;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000138;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:NA19239_ch_T0000138;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	2596466	2643575	100	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000139;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=NA19239_ch_T0000139;Name=ZFY
NA19239_chrY	CAT	exon	2596466	2596531	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000139;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000139:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2596532	2614977	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000139;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000139:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2614978	2615066	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000139;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000139:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2615006	2615066	.	+	0	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000139;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000139:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	2615006	2615008	.	+	0	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000139;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:NA19239_ch_T0000139;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2615067	2622142	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000139;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000139:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2622143	2622715	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000139;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000139:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2622143	2622715	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000139;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000139:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2622716	2636162	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000139;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000139:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2636163	2636312	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000139;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000139:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2636163	2636312	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000139;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000139:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2636313	2636578	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000139;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000139:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2636579	2636722	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000139;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000139:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2636579	2636722	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000139;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000139:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2636723	2639008	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000139;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000139:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2639009	2639149	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000139;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000139:5;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2639009	2639149	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000139;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000139:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2639150	2639878	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000139;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000139:5;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2639879	2643575	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000139;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000139:6;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2639879	2641062	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000139;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000139:5;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	2641060	2641062	.	+	0	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000139;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000139;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:NA19239_ch_T0000139;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	2596466	2643575	100	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000140;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=NA19239_ch_T0000140;Name=ZFY
NA19239_chrY	CAT	exon	2596466	2596531	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000140;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000140:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2596532	2622142	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000140;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000140:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2622143	2622715	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000140;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000140:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2622160	2622715	.	+	0	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000140;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000140:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	2622160	2622162	.	+	0	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000140;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:NA19239_ch_T0000140;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2622716	2636162	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000140;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000140:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2636163	2636312	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000140;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000140:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2636163	2636312	.	+	2	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000140;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000140:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2636313	2636578	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000140;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000140:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2636579	2636722	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000140;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000140:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2636579	2636722	.	+	2	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000140;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000140:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2636723	2639008	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000140;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000140:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2639009	2639149	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000140;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000140:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2639009	2639149	.	+	2	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000140;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000140:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2639150	2639878	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000140;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000140:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2639879	2643575	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000140;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000140:5;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2639879	2641062	.	+	2	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000140;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000140:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	2641060	2641062	.	+	0	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000140;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000140;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:NA19239_ch_T0000140;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	2596466	2643575	100	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000141;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=NA19239_ch_T0000141;Name=ZFY
NA19239_chrY	CAT	exon	2596466	2596531	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000141;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000141:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2596532	2614977	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000141;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000141:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2614978	2615066	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000141;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000141:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2615006	2615066	.	+	0	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000141;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000141:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	2615006	2615008	.	+	0	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000141;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:NA19239_ch_T0000141;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2615067	2636162	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000141;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000141:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2636163	2636312	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000141;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000141:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2636163	2636312	.	+	2	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000141;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000141:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2636313	2636578	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000141;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000141:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2636579	2636722	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000141;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000141:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2636579	2636722	.	+	2	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000141;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000141:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2636723	2639008	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000141;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000141:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2639009	2639149	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000141;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000141:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2639009	2639149	.	+	2	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000141;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000141:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2639150	2639878	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000141;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000141:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2639879	2643575	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000141;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000141:5;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2639879	2641062	.	+	2	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000141;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000141:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	2641060	2641062	.	+	0	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000141;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000141;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:NA19239_ch_T0000141;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	2596466	2643575	100	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000142;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=NA19239_ch_T0000142;Name=ZFY
NA19239_chrY	CAT	exon	2596466	2596854	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000142;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000142:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2596855	2636162	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000142;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000142:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2636163	2636312	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000142;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000142:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2636228	2636312	.	+	0	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000142;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000142:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	2636228	2636230	.	+	0	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000142;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:NA19239_ch_T0000142;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2636313	2636578	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000142;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000142:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2636579	2636722	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000142;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000142:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2636579	2636722	.	+	2	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000142;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000142:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2636723	2639008	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000142;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000142:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2639009	2639149	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000142;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000142:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2639009	2639149	.	+	2	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000142;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000142:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2639150	2639878	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000142;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000142:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2639879	2643575	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000142;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000142:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2639879	2641062	.	+	2	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000142;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000142:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	2641060	2641062	.	+	0	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000142;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:NA19239_ch_T0000142;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	2596466	2643575	100	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000143;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=NA19239_ch_T0000143;Name=ZFY
NA19239_chrY	CAT	exon	2596466	2596854	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000143;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000143:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2596855	2614977	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000143;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000143:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2614978	2615066	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000143;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000143:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2615006	2615066	.	+	0	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000143;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000143:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	2615006	2615008	.	+	0	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000143;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:NA19239_ch_T0000143;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2615067	2622142	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000143;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000143:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2622143	2622715	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000143;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000143:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2622143	2622715	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000143;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000143:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2622716	2636162	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000143;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000143:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2636163	2636312	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000143;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000143:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2636163	2636312	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000143;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000143:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2636313	2636578	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000143;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000143:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2636579	2636722	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000143;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000143:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2636579	2636722	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000143;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000143:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2636723	2637737	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000143;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000143:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2637738	2637890	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000143;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000143:5;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2637738	2637890	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000143;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000143:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2637891	2639008	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000143;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000143:5;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2639009	2639149	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000143;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000143:6;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2639009	2639149	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000143;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000143:5;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2639150	2639878	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000143;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000143:6;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2639879	2643575	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000143;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000143:7;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2639879	2641062	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000143;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000143:6;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	2641060	2641062	.	+	0	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000143;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:NA19239_ch_T0000143;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	2596466	2643575	100	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000144;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=NA19239_ch_T0000144;Name=ZFY
NA19239_chrY	CAT	exon	2596466	2596720	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000144;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000144:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2596721	2614977	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000144;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000144:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2614978	2615066	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000144;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000144:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2615006	2615066	.	+	0	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000144;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000144:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	2615006	2615008	.	+	0	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000144;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:NA19239_ch_T0000144;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2615067	2622142	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000144;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000144:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2622143	2622715	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000144;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000144:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2622143	2622715	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000144;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000144:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2622716	2636162	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000144;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000144:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2636163	2636312	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000144;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000144:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2636163	2636312	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000144;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000144:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2636313	2636578	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000144;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000144:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2636579	2636722	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000144;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000144:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2636579	2636722	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000144;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000144:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2636723	2637737	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000144;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000144:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2637738	2637890	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000144;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000144:5;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2637738	2637890	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000144;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000144:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2637891	2639008	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000144;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000144:5;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2639009	2639149	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000144;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000144:6;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2639009	2639149	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000144;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000144:5;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2639150	2639878	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000144;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000144:6;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2639879	2643575	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000144;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000144:7;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2639879	2641062	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000144;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000144:6;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	2641060	2641062	.	+	0	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000144;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:NA19239_ch_T0000144;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	2607253	2643575	100	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000145;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=NA19239_ch_T0000145;Name=ZFY
NA19239_chrY	CAT	exon	2607253	2607350	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000145;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000145:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2607351	2614977	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000145;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000145:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2614978	2615066	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000145;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000145:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2615006	2615066	.	+	0	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000145;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000145:0;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	2615006	2615008	.	+	0	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000145;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:NA19239_ch_T0000145;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2615067	2622142	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000145;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000145:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2622143	2622715	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000145;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000145:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2622143	2622715	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000145;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000145:1;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2622716	2636162	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000145;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000145:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2636163	2636312	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000145;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000145:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2636163	2636312	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000145;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000145:2;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2636313	2636578	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000145;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000145:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2636579	2636722	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000145;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000145:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2636579	2636722	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000145;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000145:3;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2636723	2637737	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000145;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000145:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2637738	2637890	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000145;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000145:5;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2637738	2637890	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000145;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000145:4;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2637891	2639008	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000145;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000145:5;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2639009	2639149	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000145;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000145:6;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2639009	2639149	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000145;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000145:5;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2639150	2639878	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000145;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19239_ch_T0000145:6;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2639879	2643575	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000145;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19239_ch_T0000145:7;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	2639879	2641062	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000145;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19239_ch_T0000145:6;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	2641060	2641062	.	+	0	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000145;gene_id=NA19239_ch_G0000037;Parent=NA19239_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:NA19239_ch_T0000145;Name=ZFY;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	2627888	2663693	.	-	.	source_gene_common_name=ZFY-AS1;source_gene=hg002_chrY_paternal_50;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;gene_id=NA19239_ch_G0000038;gene_biotype=lncRNA;gene_name=ZFY-AS1;gene_sources=liftoff;ID=NA19239_ch_G0000038;Name=ZFY-AS1
NA19239_chrY	CAT	transcript	2627888	2663693	1000	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=NA19239_ch_T0000146;gene_id=NA19239_ch_G0000038;Parent=NA19239_ch_G0000038;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=NA19239_ch_T0000146;Name=ZFY-AS1
NA19239_chrY	CAT	exon	2627888	2628007	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=NA19239_ch_T0000146;gene_id=NA19239_ch_G0000038;Parent=NA19239_ch_T0000146;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=exon:NA19239_ch_T0000146:0;Name=ZFY-AS1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2628008	2642906	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=NA19239_ch_T0000146;gene_id=NA19239_ch_G0000038;Parent=NA19239_ch_T0000146;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=intron:NA19239_ch_T0000146:0;Name=ZFY-AS1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2642907	2642996	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=NA19239_ch_T0000146;gene_id=NA19239_ch_G0000038;Parent=NA19239_ch_T0000146;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=exon:NA19239_ch_T0000146:1;Name=ZFY-AS1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2642997	2663379	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=NA19239_ch_T0000146;gene_id=NA19239_ch_G0000038;Parent=NA19239_ch_T0000146;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=intron:NA19239_ch_T0000146:1;Name=ZFY-AS1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2663380	2663693	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=NA19239_ch_T0000146;gene_id=NA19239_ch_G0000038;Parent=NA19239_ch_T0000146;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=exon:NA19239_ch_T0000146:2;Name=ZFY-AS1;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	2664063	2763337	.	+	.	source_gene_common_name=LINC00278;source_gene=hg002_chrY_paternal_52;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;gene_id=NA19239_ch_G0000039;gene_biotype=lncRNA;gene_name=LINC00278;gene_sources=liftoff;ID=NA19239_ch_G0000039;Name=LINC00278
NA19239_chrY	CAT	transcript	2664063	2763337	1000	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=NA19239_ch_T0000147;gene_id=NA19239_ch_G0000039;Parent=NA19239_ch_G0000039;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=NA19239_ch_T0000147;Name=LINC00278
NA19239_chrY	CAT	exon	2664063	2664284	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=NA19239_ch_T0000147;gene_id=NA19239_ch_G0000039;Parent=NA19239_ch_T0000147;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=exon:NA19239_ch_T0000147:0;Name=LINC00278;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2664285	2740347	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=NA19239_ch_T0000147;gene_id=NA19239_ch_G0000039;Parent=NA19239_ch_T0000147;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=intron:NA19239_ch_T0000147:0;Name=LINC00278;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2740348	2740405	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=NA19239_ch_T0000147;gene_id=NA19239_ch_G0000039;Parent=NA19239_ch_T0000147;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=exon:NA19239_ch_T0000147:1;Name=LINC00278;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2740406	2758058	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=NA19239_ch_T0000147;gene_id=NA19239_ch_G0000039;Parent=NA19239_ch_T0000147;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=intron:NA19239_ch_T0000147:1;Name=LINC00278;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2758059	2758120	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=NA19239_ch_T0000147;gene_id=NA19239_ch_G0000039;Parent=NA19239_ch_T0000147;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=exon:NA19239_ch_T0000147:2;Name=LINC00278;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	2758121	2763149	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=NA19239_ch_T0000147;gene_id=NA19239_ch_G0000039;Parent=NA19239_ch_T0000147;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=intron:NA19239_ch_T0000147:2;Name=LINC00278;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	2763150	2763337	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=NA19239_ch_T0000147;gene_id=NA19239_ch_G0000039;Parent=NA19239_ch_T0000147;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=exon:NA19239_ch_T0000147:3;Name=LINC00278;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	3240184	3241158	.	+	.	source_gene_common_name=TGIF2LY;source_gene=hg002_chrY_paternal_55;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;gene_id=NA19239_ch_G0000040;gene_biotype=protein_coding;gene_name=TGIF2LY;gene_sources=liftoff,augTM;ID=NA19239_ch_G0000040;Name=TGIF2LY
NA19239_chrY	CAT	transcript	3240184	3241158	100	+	.	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000148;gene_id=NA19239_ch_G0000040;Parent=NA19239_ch_G0000040;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=NA19239_ch_T0000148;Name=TGIF2LY
NA19239_chrY	CAT	exon	3240184	3240244	.	+	.	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000148;gene_id=NA19239_ch_G0000040;Parent=NA19239_ch_T0000148;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=exon:NA19239_ch_T0000148:0;Name=TGIF2LY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	3240245	3240340	.	+	.	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000148;gene_id=NA19239_ch_G0000040;Parent=NA19239_ch_T0000148;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=intron:NA19239_ch_T0000148:0;Name=TGIF2LY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	3240341	3241158	.	+	.	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000148;gene_id=NA19239_ch_G0000040;Parent=NA19239_ch_T0000148;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=exon:NA19239_ch_T0000148:1;Name=TGIF2LY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	3240362	3240919	.	+	0	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000148;gene_id=NA19239_ch_G0000040;Parent=NA19239_ch_T0000148;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=CDS:NA19239_ch_T0000148:0;Name=TGIF2LY;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	3240362	3240364	.	+	0	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000148;gene_id=NA19239_ch_G0000040;Parent=NA19239_ch_T0000148;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=start_codon:NA19239_ch_T0000148;Name=TGIF2LY;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	3240917	3240919	.	+	0	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000148;gene_id=NA19239_ch_G0000040;Parent=NA19239_ch_T0000148;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=stop_codon:NA19239_ch_T0000148;Name=TGIF2LY;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	3461820	3496723	.	+	.	source_gene_common_name=LOC105377227;source_gene=hg002_chrY_paternal_58;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;gene_id=NA19239_ch_G0000041;gene_biotype=lncRNA;gene_name=LOC105377227;gene_sources=liftoff;ID=NA19239_ch_G0000041;Name=LOC105377227
NA19239_chrY	CAT	transcript	3461820	3472827	1000	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=NA19239_ch_T0000149;gene_id=NA19239_ch_G0000041;Parent=NA19239_ch_G0000041;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=NA19239_ch_T0000149;Name=LOC105377227
NA19239_chrY	CAT	exon	3461820	3465121	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=NA19239_ch_T0000149;gene_id=NA19239_ch_G0000041;Parent=NA19239_ch_T0000149;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:NA19239_ch_T0000149:0;Name=LOC105377227;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	3465122	3465553	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=NA19239_ch_T0000149;gene_id=NA19239_ch_G0000041;Parent=NA19239_ch_T0000149;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:NA19239_ch_T0000149:0;Name=LOC105377227;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	3465554	3465665	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=NA19239_ch_T0000149;gene_id=NA19239_ch_G0000041;Parent=NA19239_ch_T0000149;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:NA19239_ch_T0000149:1;Name=LOC105377227;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	3465666	3470737	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=NA19239_ch_T0000149;gene_id=NA19239_ch_G0000041;Parent=NA19239_ch_T0000149;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:NA19239_ch_T0000149:1;Name=LOC105377227;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	3470738	3472827	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=NA19239_ch_T0000149;gene_id=NA19239_ch_G0000041;Parent=NA19239_ch_T0000149;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:NA19239_ch_T0000149:2;Name=LOC105377227;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	3461820	3494201	1000	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=NA19239_ch_T0000150;gene_id=NA19239_ch_G0000041;Parent=NA19239_ch_G0000041;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=NA19239_ch_T0000150;Name=LOC105377227
NA19239_chrY	CAT	exon	3461820	3465121	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=NA19239_ch_T0000150;gene_id=NA19239_ch_G0000041;Parent=NA19239_ch_T0000150;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:NA19239_ch_T0000150:0;Name=LOC105377227;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	3465122	3465553	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=NA19239_ch_T0000150;gene_id=NA19239_ch_G0000041;Parent=NA19239_ch_T0000150;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:NA19239_ch_T0000150:0;Name=LOC105377227;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	3465554	3465665	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=NA19239_ch_T0000150;gene_id=NA19239_ch_G0000041;Parent=NA19239_ch_T0000150;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:NA19239_ch_T0000150:1;Name=LOC105377227;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	3465666	3470737	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=NA19239_ch_T0000150;gene_id=NA19239_ch_G0000041;Parent=NA19239_ch_T0000150;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:NA19239_ch_T0000150:1;Name=LOC105377227;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	3470738	3470912	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=NA19239_ch_T0000150;gene_id=NA19239_ch_G0000041;Parent=NA19239_ch_T0000150;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:NA19239_ch_T0000150:2;Name=LOC105377227;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	3470913	3493571	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=NA19239_ch_T0000150;gene_id=NA19239_ch_G0000041;Parent=NA19239_ch_T0000150;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:NA19239_ch_T0000150:2;Name=LOC105377227;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	3493572	3494201	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=NA19239_ch_T0000150;gene_id=NA19239_ch_G0000041;Parent=NA19239_ch_T0000150;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:NA19239_ch_T0000150:3;Name=LOC105377227;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	3461820	3496723	1000	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=NA19239_ch_T0000151;gene_id=NA19239_ch_G0000041;Parent=NA19239_ch_G0000041;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=NA19239_ch_T0000151;Name=LOC105377227
NA19239_chrY	CAT	exon	3461820	3465121	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=NA19239_ch_T0000151;gene_id=NA19239_ch_G0000041;Parent=NA19239_ch_T0000151;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:NA19239_ch_T0000151:0;Name=LOC105377227;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	3465122	3465553	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=NA19239_ch_T0000151;gene_id=NA19239_ch_G0000041;Parent=NA19239_ch_T0000151;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:NA19239_ch_T0000151:0;Name=LOC105377227;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	3465554	3465665	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=NA19239_ch_T0000151;gene_id=NA19239_ch_G0000041;Parent=NA19239_ch_T0000151;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:NA19239_ch_T0000151:1;Name=LOC105377227;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	3465666	3496628	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=NA19239_ch_T0000151;gene_id=NA19239_ch_G0000041;Parent=NA19239_ch_T0000151;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:NA19239_ch_T0000151:1;Name=LOC105377227;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	3496629	3496723	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=NA19239_ch_T0000151;gene_id=NA19239_ch_G0000041;Parent=NA19239_ch_T0000151;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:NA19239_ch_T0000151:2;Name=LOC105377227;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	4269494	4269532	.	+	.	source_gene_common_name=MIR9985;source_gene=hg002_chrY_paternal_62;alternative_source_transcripts=hg002_chrY_paternal_62.1,hg002_chrY_paternal_62.1;gene_id=NA19239_ch_G0000042;gene_biotype=miRNA;gene_name=MIR9985;gene_sources=liftoff;ID=NA19239_ch_G0000042;Name=MIR9985
NA19239_chrY	CAT	transcript	4269494	4269604	1000	+	.	source_transcript=hg002_chrY_paternal_62.1;source_transcript_name=hg002_chrY_paternal_62.1;source_gene=hg002_chrY_paternal_62;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_62;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_62.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_62.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR9985;alternative_source_transcripts=hg002_chrY_paternal_62.1,hg002_chrY_paternal_62.1;transcript_id=NA19239_ch_T0000152;gene_id=NA19239_ch_G0000042;Parent=NA19239_ch_G0000042;transcript_name=hg002_chrY_paternal_62.1;gene_name=MIR9985;ID=NA19239_ch_T0000152;Name=MIR9985
NA19239_chrY	CAT	exon	4269494	4269604	.	+	.	source_transcript=hg002_chrY_paternal_62.1;source_transcript_name=hg002_chrY_paternal_62.1;source_gene=hg002_chrY_paternal_62;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_62;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_62.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_62.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR9985;alternative_source_transcripts=hg002_chrY_paternal_62.1,hg002_chrY_paternal_62.1;transcript_id=NA19239_ch_T0000152;gene_id=NA19239_ch_G0000042;Parent=NA19239_ch_T0000152;transcript_name=hg002_chrY_paternal_62.1;gene_name=MIR9985;ID=exon:NA19239_ch_T0000152:0;Name=MIR9985;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	4269514	4269532	1000	+	.	source_transcript=hg002_chrY_paternal_62.2;source_transcript_name=hg002_chrY_paternal_62.1;source_gene=hg002_chrY_paternal_62;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_62;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_62.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_62.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR9985;alternative_source_transcripts=hg002_chrY_paternal_62.2,hg002_chrY_paternal_62.2;transcript_id=NA19239_ch_T0000153;gene_id=NA19239_ch_G0000042;Parent=NA19239_ch_G0000042;transcript_name=hg002_chrY_paternal_62.1;gene_name=MIR9985;ID=NA19239_ch_T0000153;Name=MIR9985
NA19239_chrY	CAT	exon	4269514	4269532	.	+	.	source_transcript=hg002_chrY_paternal_62.2;source_transcript_name=hg002_chrY_paternal_62.1;source_gene=hg002_chrY_paternal_62;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_62;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_62.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_62.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR9985;alternative_source_transcripts=hg002_chrY_paternal_62.2,hg002_chrY_paternal_62.2;transcript_id=NA19239_ch_T0000153;gene_id=NA19239_ch_G0000042;Parent=NA19239_ch_T0000153;transcript_name=hg002_chrY_paternal_62.1;gene_name=MIR9985;ID=exon:NA19239_ch_T0000153:0;Name=MIR9985;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	4663660	5405996	.	+	.	source_gene_common_name=PCDH11Y;source_gene=hg002_chrY_paternal_64;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;gene_id=NA19239_ch_G0000043;gene_biotype=protein_coding;gene_name=PCDH11Y;gene_sources=liftoff,augTM;ID=NA19239_ch_G0000043;Name=PCDH11Y
NA19239_chrY	CAT	transcript	4663660	4768971	100	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000154;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=NA19239_ch_T0000154;Name=PCDH11Y
NA19239_chrY	CAT	exon	4663660	4663969	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000154;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000154;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000154:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4663970	4694274	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000154;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000154;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000154:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	4694275	4694443	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000154;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000154;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000154:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4694444	4695281	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000154;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000154;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000154:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	4695282	4695387	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000154;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000154;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000154:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4695388	4696045	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000154;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000154;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000154:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	4696046	4696104	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000154;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000154;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000154:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	4696073	4696104	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000154;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000154;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000154:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	4696073	4696075	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000154;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000154;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:NA19239_ch_T0000154;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4696105	4720264	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000154;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000154;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000154:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	4720265	4720835	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000154;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000154;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000154:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	4720265	4720835	.	+	1	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000154;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000154;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000154:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4720836	4761587	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000154;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000154;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000154:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	4761588	4764080	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000154;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000154;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000154:5;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	4761588	4764080	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000154;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000154;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000154:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4764081	4767716	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000154;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000154;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000154:5;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	4767717	4768971	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000154;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000154;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000154:6;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	4767717	4767734	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000154;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000154;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000154:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	4767732	4767734	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000154;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000154;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:NA19239_ch_T0000154;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	4663660	4768971	100	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000155;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=NA19239_ch_T0000155;Name=PCDH11Y
NA19239_chrY	CAT	exon	4663660	4663969	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000155;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000155;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000155:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4663970	4695281	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000155;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000155;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000155:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	4695282	4695387	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000155;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000155;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000155:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4695388	4696045	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000155;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000155;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000155:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	4696046	4696104	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000155;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000155;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000155:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	4696073	4696104	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000155;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000155;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000155:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	4696073	4696075	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000155;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000155;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:NA19239_ch_T0000155;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4696105	4720264	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000155;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000155;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000155:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	4720265	4720835	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000155;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000155;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000155:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	4720265	4720835	.	+	1	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000155;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000155;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000155:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4720836	4761587	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000155;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000155;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000155:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	4761588	4764080	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000155;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000155;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000155:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	4761588	4764080	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000155;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000155;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000155:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4764081	4767716	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000155;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000155;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000155:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	4767717	4768971	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000155;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000155;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000155:5;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	4767717	4767734	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000155;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000155;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000155:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	4767732	4767734	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000155;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000155;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:NA19239_ch_T0000155;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	4663660	5405992	100	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000156;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=NA19239_ch_T0000156;Name=PCDH11Y
NA19239_chrY	CAT	exon	4663660	4663969	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000156;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000156:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4663970	4720264	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000156;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000156:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	4720265	4720835	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000156;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000156:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	4720476	4720835	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000156;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000156:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	4720476	4720478	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000156;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:NA19239_ch_T0000156;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4720836	4761587	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000156;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000156:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	4761588	4764080	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000156;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000156:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	4761588	4764080	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000156;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000156:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4764081	5164422	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000156;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000156:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	5164423	5164621	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000156;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000156:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	5164423	5164621	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000156;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000156:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	5164622	5245543	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000156;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000156:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	5245544	5245567	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000156;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000156:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	5245544	5245567	.	+	2	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000156;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000156:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	5245568	5401039	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000156;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000156:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	5401040	5405992	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000156;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000156:5;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	5401040	5401710	.	+	2	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000156;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000156:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	5401708	5401710	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000156;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000156;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:NA19239_ch_T0000156;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	4663660	5405996	100	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000157;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=NA19239_ch_T0000157;Name=PCDH11Y
NA19239_chrY	CAT	exon	4663660	4663969	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000157;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000157:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4663970	4666051	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000157;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000157:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	4666052	4670099	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000157;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000157:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4670100	4694274	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000157;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000157:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	4694275	4694443	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000157;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000157:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4694444	4694590	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000157;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000157:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	4694591	4694722	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000157;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000157:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4694723	4695281	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000157;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000157:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	4695282	4695387	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000157;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000157:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4695388	4696045	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000157;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000157:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	4696046	4696104	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000157;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000157:5;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	4696073	4696104	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000157;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000157:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	4696073	4696075	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000157;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:NA19239_ch_T0000157;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4696105	4720264	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000157;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000157:5;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	4720265	4720835	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000157;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000157:6;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	4720265	4720835	.	+	1	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000157;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000157:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4720836	4761587	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000157;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000157:6;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	4761588	4764080	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000157;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000157:7;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	4761588	4764080	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000157;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000157:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4764081	5164422	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000157;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000157:7;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	5164423	5164621	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000157;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000157:8;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	5164423	5164621	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000157;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000157:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	5164622	5245543	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000157;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000157:8;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	5245544	5245567	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000157;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000157:9;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	5245544	5245567	.	+	2	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000157;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000157:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	5245568	5401039	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000157;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000157:9;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	5401040	5405996	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000157;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000157:10;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	5401040	5401710	.	+	2	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000157;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000157:5;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	5401708	5401710	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000157;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000157;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:NA19239_ch_T0000157;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	4663660	5405996	100	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000158;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=NA19239_ch_T0000158;Name=PCDH11Y
NA19239_chrY	CAT	exon	4663660	4663969	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000158;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000158:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4663970	4694274	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000158;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000158:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	4694275	4694443	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000158;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000158:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4694444	4694590	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000158;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000158:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	4694591	4694722	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000158;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000158:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4694723	4695281	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000158;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000158:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	4695282	4695387	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000158;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000158:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4695388	4696045	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000158;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000158:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	4696046	4696104	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000158;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000158:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	4696073	4696104	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000158;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000158:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	4696073	4696075	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000158;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:NA19239_ch_T0000158;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4696105	4720264	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000158;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000158:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	4720265	4720835	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000158;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000158:5;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	4720265	4720835	.	+	1	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000158;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000158:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4720836	4761587	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000158;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000158:5;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	4761588	4764080	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000158;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000158:6;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	4761588	4764080	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000158;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000158:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4764081	5164422	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000158;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000158:6;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	5164423	5164621	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000158;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000158:7;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	5164423	5164621	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000158;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000158:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	5164622	5245543	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000158;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000158:7;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	5245544	5245567	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000158;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000158:8;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	5245544	5245567	.	+	2	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000158;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000158:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	5245568	5401039	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000158;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000158:8;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	5401040	5405996	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000158;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000158:9;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	5401040	5401710	.	+	2	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000158;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000158:5;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	5401708	5401710	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000158;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000158;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:NA19239_ch_T0000158;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	4663660	5405996	100	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000159;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=NA19239_ch_T0000159;Name=PCDH11Y
NA19239_chrY	CAT	exon	4663660	4663969	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000159;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000159;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000159:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4663970	4666051	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000159;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000159;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000159:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	4666052	4666122	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000159;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000159;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000159:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4666123	4695281	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000159;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000159;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000159:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	4695282	4695387	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000159;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000159;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000159:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4695388	4696045	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000159;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000159;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000159:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	4696046	4696104	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000159;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000159;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000159:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	4696073	4696104	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000159;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000159;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000159:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	4696073	4696075	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000159;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000159;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:NA19239_ch_T0000159;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4696105	4720264	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000159;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000159;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000159:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	4720265	4720835	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000159;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000159;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000159:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	4720265	4720835	.	+	1	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000159;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000159;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000159:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4720836	4761587	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000159;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000159;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000159:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	4761588	4764080	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000159;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000159;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000159:5;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	4761588	4764080	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000159;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000159;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000159:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4764081	5164422	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000159;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000159;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000159:5;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	5164423	5164621	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000159;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000159;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000159:6;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	5164423	5164621	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000159;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000159;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000159:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	5164622	5245543	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000159;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000159;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000159:6;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	5245544	5245567	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000159;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000159;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000159:7;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	5245544	5245567	.	+	2	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000159;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000159;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000159:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	5245568	5401039	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000159;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000159;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000159:7;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	5401040	5405996	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000159;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000159;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000159:8;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	5401040	5401710	.	+	2	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000159;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000159;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000159:5;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	5401708	5401710	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000159;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000159;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:NA19239_ch_T0000159;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	4719464	4768971	100	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000160;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=NA19239_ch_T0000160;Name=PCDH11Y
NA19239_chrY	CAT	exon	4719464	4720835	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000160;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000160;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000160:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	4720200	4720835	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000160;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000160;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000160:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	4720200	4720202	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000160;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000160;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:NA19239_ch_T0000160;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4720836	4761587	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000160;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000160;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000160:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	4761588	4764080	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000160;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000160;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000160:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	4761588	4764080	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000160;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000160;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000160:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4764081	4767716	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000160;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000160;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000160:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	4767717	4768971	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000160;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000160;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000160:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	4767717	4767734	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000160;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000160;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000160:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	4767732	4767734	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000160;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000160;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:NA19239_ch_T0000160;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	4719466	5405996	100	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000161;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=NA19239_ch_T0000161;Name=PCDH11Y
NA19239_chrY	CAT	exon	4719466	4720835	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000161;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000161;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000161:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	4720200	4720835	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000161;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000161;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000161:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	4720200	4720202	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000161;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000161;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:NA19239_ch_T0000161;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4720836	4761587	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000161;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000161;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000161:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	4761588	4764080	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000161;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000161;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000161:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	4761588	4764080	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000161;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000161;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000161:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	4764081	5164422	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000161;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000161;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000161:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	5164423	5164621	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000161;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000161;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000161:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	5164423	5164621	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000161;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000161;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000161:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	5164622	5245543	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000161;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000161;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000161:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	5245544	5245567	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000161;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000161;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000161:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	5245544	5245567	.	+	2	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000161;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000161;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000161:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	5245568	5401039	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000161;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000161;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19239_ch_T0000161:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	5401040	5405996	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000161;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000161;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19239_ch_T0000161:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	5401040	5401710	.	+	2	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000161;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000161;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19239_ch_T0000161:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	5401708	5401710	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000161;gene_id=NA19239_ch_G0000043;Parent=NA19239_ch_T0000161;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:NA19239_ch_T0000161;Name=PCDH11Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	5906190	5907354	.	-	.	source_gene_common_name=TTTY23;source_gene=hg002_chrY_paternal_73;gene_id=NA19239_ch_G0000044;gene_biotype=lncRNA;gene_name=TTTY23;gene_sources=liftoff;ID=NA19239_ch_G0000044;Name=TTTY23
NA19239_chrY	CAT	transcript	5906190	5907354	1000	-	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=NA19239_ch_T0000162;gene_id=NA19239_ch_G0000044;Parent=NA19239_ch_G0000044;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=NA19239_ch_T0000162;Name=TTTY23
NA19239_chrY	CAT	exon	5906190	5906498	.	-	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=NA19239_ch_T0000162;gene_id=NA19239_ch_G0000044;Parent=NA19239_ch_T0000162;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=exon:NA19239_ch_T0000162:0;Name=TTTY23;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	5906499	5907038	.	-	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=NA19239_ch_T0000162;gene_id=NA19239_ch_G0000044;Parent=NA19239_ch_T0000162;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=intron:NA19239_ch_T0000162:0;Name=TTTY23;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	5907039	5907184	.	-	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=NA19239_ch_T0000162;gene_id=NA19239_ch_G0000044;Parent=NA19239_ch_T0000162;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=exon:NA19239_ch_T0000162:1;Name=TTTY23;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	5907185	5907297	.	-	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=NA19239_ch_T0000162;gene_id=NA19239_ch_G0000044;Parent=NA19239_ch_T0000162;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=intron:NA19239_ch_T0000162:1;Name=TTTY23;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	5907298	5907354	.	-	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=NA19239_ch_T0000162;gene_id=NA19239_ch_G0000044;Parent=NA19239_ch_T0000162;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=exon:NA19239_ch_T0000162:2;Name=TTTY23;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6000630	6004838	.	-	.	source_gene_common_name=LINC00280;source_gene=hg002_chrY_paternal_77;alternative_source_transcripts=hg002_chrY_paternal_77.1;gene_id=NA19239_ch_G0000045;gene_biotype=lncRNA;gene_name=LINC00280;gene_sources=liftoff;ID=NA19239_ch_G0000045;Name=LINC00280
NA19239_chrY	CAT	transcript	6000630	6004838	1000	-	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1;transcript_id=NA19239_ch_T0000163;gene_id=NA19239_ch_G0000045;Parent=NA19239_ch_G0000045;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=NA19239_ch_T0000163;Name=LINC00280
NA19239_chrY	CAT	exon	6000630	6000848	.	-	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1;transcript_id=NA19239_ch_T0000163;gene_id=NA19239_ch_G0000045;Parent=NA19239_ch_T0000163;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=exon:NA19239_ch_T0000163:0;Name=LINC00280;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6000849	6002106	.	-	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1;transcript_id=NA19239_ch_T0000163;gene_id=NA19239_ch_G0000045;Parent=NA19239_ch_T0000163;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=intron:NA19239_ch_T0000163:0;Name=LINC00280;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6002107	6002249	.	-	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1;transcript_id=NA19239_ch_T0000163;gene_id=NA19239_ch_G0000045;Parent=NA19239_ch_T0000163;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=exon:NA19239_ch_T0000163:1;Name=LINC00280;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6002250	6004752	.	-	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1;transcript_id=NA19239_ch_T0000163;gene_id=NA19239_ch_G0000045;Parent=NA19239_ch_T0000163;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=intron:NA19239_ch_T0000163:1;Name=LINC00280;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6004753	6004838	.	-	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1;transcript_id=NA19239_ch_T0000163;gene_id=NA19239_ch_G0000045;Parent=NA19239_ch_T0000163;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=exon:NA19239_ch_T0000163:2;Name=LINC00280;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6004908	6016994	.	-	.	source_gene_common_name=TTTY22;source_gene=hg002_chrY_paternal_78;alternative_source_transcripts=hg002_chrY_paternal_78.1;gene_id=NA19239_ch_G0000046;gene_biotype=lncRNA;gene_name=TTTY22;gene_sources=liftoff;ID=NA19239_ch_G0000046;Name=TTTY22
NA19239_chrY	CAT	transcript	6004908	6016994	1000	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1;transcript_id=NA19239_ch_T0000164;gene_id=NA19239_ch_G0000046;Parent=NA19239_ch_G0000046;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=NA19239_ch_T0000164;Name=TTTY22
NA19239_chrY	CAT	exon	6004908	6004953	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1;transcript_id=NA19239_ch_T0000164;gene_id=NA19239_ch_G0000046;Parent=NA19239_ch_T0000164;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=exon:NA19239_ch_T0000164:0;Name=TTTY22;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6004954	6008043	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1;transcript_id=NA19239_ch_T0000164;gene_id=NA19239_ch_G0000046;Parent=NA19239_ch_T0000164;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=intron:NA19239_ch_T0000164:0;Name=TTTY22;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6008044	6008082	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1;transcript_id=NA19239_ch_T0000164;gene_id=NA19239_ch_G0000046;Parent=NA19239_ch_T0000164;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=exon:NA19239_ch_T0000164:1;Name=TTTY22;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6008083	6008767	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1;transcript_id=NA19239_ch_T0000164;gene_id=NA19239_ch_G0000046;Parent=NA19239_ch_T0000164;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=intron:NA19239_ch_T0000164:1;Name=TTTY22;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6008768	6008842	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1;transcript_id=NA19239_ch_T0000164;gene_id=NA19239_ch_G0000046;Parent=NA19239_ch_T0000164;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=exon:NA19239_ch_T0000164:2;Name=TTTY22;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6008843	6013267	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1;transcript_id=NA19239_ch_T0000164;gene_id=NA19239_ch_G0000046;Parent=NA19239_ch_T0000164;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=intron:NA19239_ch_T0000164:2;Name=TTTY22;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6013268	6013379	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1;transcript_id=NA19239_ch_T0000164;gene_id=NA19239_ch_G0000046;Parent=NA19239_ch_T0000164;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=exon:NA19239_ch_T0000164:3;Name=TTTY22;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6013380	6016839	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1;transcript_id=NA19239_ch_T0000164;gene_id=NA19239_ch_G0000046;Parent=NA19239_ch_T0000164;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=intron:NA19239_ch_T0000164:3;Name=TTTY22;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6016840	6016994	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1;transcript_id=NA19239_ch_T0000164;gene_id=NA19239_ch_G0000046;Parent=NA19239_ch_T0000164;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=exon:NA19239_ch_T0000164:4;Name=TTTY22;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6020048	6023355	.	-	.	source_gene_common_name=LOC107987342;source_gene=hg002_chrY_paternal_79;gene_id=NA19239_ch_G0000047;gene_biotype=lncRNA;gene_name=LOC107987342;gene_sources=liftoff;ID=NA19239_ch_G0000047;Name=LOC107987342
NA19239_chrY	CAT	transcript	6020048	6023355	1000	-	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;transcript_id=NA19239_ch_T0000165;gene_id=NA19239_ch_G0000047;Parent=NA19239_ch_G0000047;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=NA19239_ch_T0000165;Name=LOC107987342
NA19239_chrY	CAT	exon	6020048	6020196	.	-	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;transcript_id=NA19239_ch_T0000165;gene_id=NA19239_ch_G0000047;Parent=NA19239_ch_T0000165;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=exon:NA19239_ch_T0000165:0;Name=LOC107987342;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6020197	6022727	.	-	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;transcript_id=NA19239_ch_T0000165;gene_id=NA19239_ch_G0000047;Parent=NA19239_ch_T0000165;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=intron:NA19239_ch_T0000165:0;Name=LOC107987342;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6022728	6022800	.	-	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;transcript_id=NA19239_ch_T0000165;gene_id=NA19239_ch_G0000047;Parent=NA19239_ch_T0000165;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=exon:NA19239_ch_T0000165:1;Name=LOC107987342;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6022801	6023176	.	-	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;transcript_id=NA19239_ch_T0000165;gene_id=NA19239_ch_G0000047;Parent=NA19239_ch_T0000165;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=intron:NA19239_ch_T0000165:1;Name=LOC107987342;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6023177	6023355	.	-	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;transcript_id=NA19239_ch_T0000165;gene_id=NA19239_ch_G0000047;Parent=NA19239_ch_T0000165;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=exon:NA19239_ch_T0000165:2;Name=LOC107987342;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6043826	6064989	.	+	.	source_gene_common_name=TTTY1;source_gene=hg002_chrY_paternal_80;gene_id=NA19239_ch_G0000048;gene_biotype=lncRNA;gene_name=TTTY1;gene_sources=liftoff;ID=NA19239_ch_G0000048;Name=TTTY1
NA19239_chrY	CAT	transcript	6043826	6064989	1000	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;transcript_id=NA19239_ch_T0000166;gene_id=NA19239_ch_G0000048;Parent=NA19239_ch_G0000048;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=NA19239_ch_T0000166;Name=TTTY1
NA19239_chrY	CAT	exon	6043826	6044100	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;transcript_id=NA19239_ch_T0000166;gene_id=NA19239_ch_G0000048;Parent=NA19239_ch_T0000166;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:NA19239_ch_T0000166:0;Name=TTTY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6044101	6047524	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;transcript_id=NA19239_ch_T0000166;gene_id=NA19239_ch_G0000048;Parent=NA19239_ch_T0000166;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=intron:NA19239_ch_T0000166:0;Name=TTTY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6047525	6047684	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;transcript_id=NA19239_ch_T0000166;gene_id=NA19239_ch_G0000048;Parent=NA19239_ch_T0000166;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:NA19239_ch_T0000166:1;Name=TTTY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6047685	6054547	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;transcript_id=NA19239_ch_T0000166;gene_id=NA19239_ch_G0000048;Parent=NA19239_ch_T0000166;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=intron:NA19239_ch_T0000166:1;Name=TTTY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6054548	6054656	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;transcript_id=NA19239_ch_T0000166;gene_id=NA19239_ch_G0000048;Parent=NA19239_ch_T0000166;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:NA19239_ch_T0000166:2;Name=TTTY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6054657	6057012	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;transcript_id=NA19239_ch_T0000166;gene_id=NA19239_ch_G0000048;Parent=NA19239_ch_T0000166;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=intron:NA19239_ch_T0000166:2;Name=TTTY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6057013	6057150	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;transcript_id=NA19239_ch_T0000166;gene_id=NA19239_ch_G0000048;Parent=NA19239_ch_T0000166;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:NA19239_ch_T0000166:3;Name=TTTY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6057151	6064731	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;transcript_id=NA19239_ch_T0000166;gene_id=NA19239_ch_G0000048;Parent=NA19239_ch_T0000166;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=intron:NA19239_ch_T0000166:3;Name=TTTY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6064732	6064989	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;transcript_id=NA19239_ch_T0000166;gene_id=NA19239_ch_G0000048;Parent=NA19239_ch_T0000166;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:NA19239_ch_T0000166:4;Name=TTTY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6059669	6081871	.	-	.	source_gene_common_name=TTTY2;source_gene=hg002_chrY_paternal_248;gene_id=NA19239_ch_G0000049;gene_biotype=lncRNA;gene_name=TTTY2;gene_sources=liftoff;ID=NA19239_ch_G0000049;Name=TTTY2
NA19239_chrY	CAT	transcript	6059669	6081871	1000	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=NA19239_ch_T0000167;gene_id=NA19239_ch_G0000049;Parent=NA19239_ch_G0000049;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=NA19239_ch_T0000167;Name=TTTY2
NA19239_chrY	CAT	exon	6059669	6060348	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=NA19239_ch_T0000167;gene_id=NA19239_ch_G0000049;Parent=NA19239_ch_T0000167;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:NA19239_ch_T0000167:0;Name=TTTY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6060349	6061571	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=NA19239_ch_T0000167;gene_id=NA19239_ch_G0000049;Parent=NA19239_ch_T0000167;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:NA19239_ch_T0000167:0;Name=TTTY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6061572	6061769	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=NA19239_ch_T0000167;gene_id=NA19239_ch_G0000049;Parent=NA19239_ch_T0000167;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:NA19239_ch_T0000167:1;Name=TTTY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6061770	6061889	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=NA19239_ch_T0000167;gene_id=NA19239_ch_G0000049;Parent=NA19239_ch_T0000167;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:NA19239_ch_T0000167:1;Name=TTTY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6061890	6061968	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=NA19239_ch_T0000167;gene_id=NA19239_ch_G0000049;Parent=NA19239_ch_T0000167;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:NA19239_ch_T0000167:2;Name=TTTY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6061969	6064798	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=NA19239_ch_T0000167;gene_id=NA19239_ch_G0000049;Parent=NA19239_ch_T0000167;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:NA19239_ch_T0000167:2;Name=TTTY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6064799	6064955	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=NA19239_ch_T0000167;gene_id=NA19239_ch_G0000049;Parent=NA19239_ch_T0000167;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:NA19239_ch_T0000167:3;Name=TTTY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6064956	6065647	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=NA19239_ch_T0000167;gene_id=NA19239_ch_G0000049;Parent=NA19239_ch_T0000167;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:NA19239_ch_T0000167:3;Name=TTTY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6065648	6065796	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=NA19239_ch_T0000167;gene_id=NA19239_ch_G0000049;Parent=NA19239_ch_T0000167;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:NA19239_ch_T0000167:4;Name=TTTY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6065797	6073190	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=NA19239_ch_T0000167;gene_id=NA19239_ch_G0000049;Parent=NA19239_ch_T0000167;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:NA19239_ch_T0000167:4;Name=TTTY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6073191	6073277	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=NA19239_ch_T0000167;gene_id=NA19239_ch_G0000049;Parent=NA19239_ch_T0000167;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:NA19239_ch_T0000167:5;Name=TTTY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6073278	6075753	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=NA19239_ch_T0000167;gene_id=NA19239_ch_G0000049;Parent=NA19239_ch_T0000167;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:NA19239_ch_T0000167:5;Name=TTTY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6075754	6075831	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=NA19239_ch_T0000167;gene_id=NA19239_ch_G0000049;Parent=NA19239_ch_T0000167;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:NA19239_ch_T0000167:6;Name=TTTY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6075832	6081666	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=NA19239_ch_T0000167;gene_id=NA19239_ch_G0000049;Parent=NA19239_ch_T0000167;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:NA19239_ch_T0000167:6;Name=TTTY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6081667	6081871	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=NA19239_ch_T0000167;gene_id=NA19239_ch_G0000049;Parent=NA19239_ch_T0000167;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:NA19239_ch_T0000167:7;Name=TTTY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6096861	6100504	.	+	.	source_gene_common_name=TTTY21;source_gene=hg002_chrY_paternal_247;gene_id=NA19239_ch_G0000050;gene_biotype=lncRNA;gene_name=TTTY21;gene_sources=liftoff;ID=NA19239_ch_G0000050;Name=TTTY21
NA19239_chrY	CAT	transcript	6096861	6100504	1000	+	.	source_transcript=hg002_chrY_paternal_247.1;source_transcript_name=hg002_chrY_paternal_247.1;source_gene=hg002_chrY_paternal_247;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_247;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_247.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_247.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21;transcript_id=NA19239_ch_T0000168;gene_id=NA19239_ch_G0000050;Parent=NA19239_ch_G0000050;transcript_name=hg002_chrY_paternal_247.1;gene_name=TTTY21;ID=NA19239_ch_T0000168;Name=TTTY21
NA19239_chrY	CAT	exon	6096861	6097062	.	+	.	source_transcript=hg002_chrY_paternal_247.1;source_transcript_name=hg002_chrY_paternal_247.1;source_gene=hg002_chrY_paternal_247;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_247;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_247.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_247.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21;transcript_id=NA19239_ch_T0000168;gene_id=NA19239_ch_G0000050;Parent=NA19239_ch_T0000168;transcript_name=hg002_chrY_paternal_247.1;gene_name=TTTY21;ID=exon:NA19239_ch_T0000168:0;Name=TTTY21;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6097063	6100399	.	+	.	source_transcript=hg002_chrY_paternal_247.1;source_transcript_name=hg002_chrY_paternal_247.1;source_gene=hg002_chrY_paternal_247;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_247;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_247.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_247.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21;transcript_id=NA19239_ch_T0000168;gene_id=NA19239_ch_G0000050;Parent=NA19239_ch_T0000168;transcript_name=hg002_chrY_paternal_247.1;gene_name=TTTY21;ID=intron:NA19239_ch_T0000168:0;Name=TTTY21;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6100400	6100504	.	+	.	source_transcript=hg002_chrY_paternal_247.1;source_transcript_name=hg002_chrY_paternal_247.1;source_gene=hg002_chrY_paternal_247;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_247;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_247.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_247.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21;transcript_id=NA19239_ch_T0000168;gene_id=NA19239_ch_G0000050;Parent=NA19239_ch_T0000168;transcript_name=hg002_chrY_paternal_247.1;gene_name=TTTY21;ID=exon:NA19239_ch_T0000168:1;Name=TTTY21;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6102895	6111333	.	+	.	source_gene_common_name=TTTY7B;source_gene=hg002_chrY_paternal_246;gene_id=NA19239_ch_G0000051;gene_biotype=lncRNA;gene_name=TTTY7B;gene_sources=liftoff;ID=NA19239_ch_G0000051;Name=TTTY7B
NA19239_chrY	CAT	transcript	6102895	6111333	1000	+	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=NA19239_ch_T0000169;gene_id=NA19239_ch_G0000051;Parent=NA19239_ch_G0000051;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=NA19239_ch_T0000169;Name=TTTY7B
NA19239_chrY	CAT	exon	6102895	6102931	.	+	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=NA19239_ch_T0000169;gene_id=NA19239_ch_G0000051;Parent=NA19239_ch_T0000169;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:NA19239_ch_T0000169:0;Name=TTTY7B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6102932	6103872	.	+	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=NA19239_ch_T0000169;gene_id=NA19239_ch_G0000051;Parent=NA19239_ch_T0000169;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:NA19239_ch_T0000169:0;Name=TTTY7B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6103873	6104034	.	+	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=NA19239_ch_T0000169;gene_id=NA19239_ch_G0000051;Parent=NA19239_ch_T0000169;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:NA19239_ch_T0000169:1;Name=TTTY7B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6104035	6106341	.	+	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=NA19239_ch_T0000169;gene_id=NA19239_ch_G0000051;Parent=NA19239_ch_T0000169;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:NA19239_ch_T0000169:1;Name=TTTY7B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6106342	6106416	.	+	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=NA19239_ch_T0000169;gene_id=NA19239_ch_G0000051;Parent=NA19239_ch_T0000169;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:NA19239_ch_T0000169:2;Name=TTTY7B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6106417	6107104	.	+	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=NA19239_ch_T0000169;gene_id=NA19239_ch_G0000051;Parent=NA19239_ch_T0000169;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:NA19239_ch_T0000169:2;Name=TTTY7B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6107105	6107581	.	+	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=NA19239_ch_T0000169;gene_id=NA19239_ch_G0000051;Parent=NA19239_ch_T0000169;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:NA19239_ch_T0000169:3;Name=TTTY7B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6107582	6109498	.	+	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=NA19239_ch_T0000169;gene_id=NA19239_ch_G0000051;Parent=NA19239_ch_T0000169;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:NA19239_ch_T0000169:3;Name=TTTY7B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6109499	6109612	.	+	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=NA19239_ch_T0000169;gene_id=NA19239_ch_G0000051;Parent=NA19239_ch_T0000169;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:NA19239_ch_T0000169:4;Name=TTTY7B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6109613	6111087	.	+	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=NA19239_ch_T0000169;gene_id=NA19239_ch_G0000051;Parent=NA19239_ch_T0000169;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:NA19239_ch_T0000169:4;Name=TTTY7B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6111088	6111333	.	+	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=NA19239_ch_T0000169;gene_id=NA19239_ch_G0000051;Parent=NA19239_ch_T0000169;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:NA19239_ch_T0000169:5;Name=TTTY7B;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6124455	6127054	.	-	.	source_gene_common_name=TTTY8;source_gene=hg002_chrY_paternal_245;alternative_source_transcripts=hg002_chrY_paternal_245.1;gene_id=NA19239_ch_G0000052;gene_biotype=lncRNA;gene_name=TTTY8;gene_sources=liftoff;ID=NA19239_ch_G0000052;Name=TTTY8
NA19239_chrY	CAT	transcript	6124455	6127054	1000	-	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1;transcript_id=NA19239_ch_T0000170;gene_id=NA19239_ch_G0000052;Parent=NA19239_ch_G0000052;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=NA19239_ch_T0000170;Name=TTTY8
NA19239_chrY	CAT	exon	6124455	6124644	.	-	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1;transcript_id=NA19239_ch_T0000170;gene_id=NA19239_ch_G0000052;Parent=NA19239_ch_T0000170;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=exon:NA19239_ch_T0000170:0;Name=TTTY8;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6124645	6126236	.	-	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1;transcript_id=NA19239_ch_T0000170;gene_id=NA19239_ch_G0000052;Parent=NA19239_ch_T0000170;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=intron:NA19239_ch_T0000170:0;Name=TTTY8;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6126237	6126441	.	-	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1;transcript_id=NA19239_ch_T0000170;gene_id=NA19239_ch_G0000052;Parent=NA19239_ch_T0000170;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=exon:NA19239_ch_T0000170:1;Name=TTTY8;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6126442	6126918	.	-	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1;transcript_id=NA19239_ch_T0000170;gene_id=NA19239_ch_G0000052;Parent=NA19239_ch_T0000170;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=intron:NA19239_ch_T0000170:1;Name=TTTY8;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6126919	6127054	.	-	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1;transcript_id=NA19239_ch_T0000170;gene_id=NA19239_ch_G0000052;Parent=NA19239_ch_T0000170;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=exon:NA19239_ch_T0000170:2;Name=TTTY8;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6203011	6207443	.	+	.	source_gene_common_name=RBMY3AP;source_gene=hg002_chrY_paternal_242;alternative_source_transcripts=hg002_chrY_paternal_242.1;gene_id=NA19239_ch_G0000053;gene_biotype=transcribed_pseudogene;gene_name=RBMY3AP;gene_sources=liftoff;ID=NA19239_ch_G0000053;Name=RBMY3AP
NA19239_chrY	CAT	transcript	6203011	6207443	1000	+	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1;transcript_id=NA19239_ch_T0000171;gene_id=NA19239_ch_G0000053;Parent=NA19239_ch_G0000053;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=NA19239_ch_T0000171;Name=RBMY3AP
NA19239_chrY	CAT	exon	6203011	6203074	.	+	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1;transcript_id=NA19239_ch_T0000171;gene_id=NA19239_ch_G0000053;Parent=NA19239_ch_T0000171;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=exon:NA19239_ch_T0000171:0;Name=RBMY3AP;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6203075	6203280	.	+	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1;transcript_id=NA19239_ch_T0000171;gene_id=NA19239_ch_G0000053;Parent=NA19239_ch_T0000171;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=intron:NA19239_ch_T0000171:0;Name=RBMY3AP;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6203281	6203382	.	+	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1;transcript_id=NA19239_ch_T0000171;gene_id=NA19239_ch_G0000053;Parent=NA19239_ch_T0000171;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=exon:NA19239_ch_T0000171:1;Name=RBMY3AP;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6203383	6207292	.	+	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1;transcript_id=NA19239_ch_T0000171;gene_id=NA19239_ch_G0000053;Parent=NA19239_ch_T0000171;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=intron:NA19239_ch_T0000171:1;Name=RBMY3AP;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6207293	6207443	.	+	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1;transcript_id=NA19239_ch_T0000171;gene_id=NA19239_ch_G0000053;Parent=NA19239_ch_T0000171;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=exon:NA19239_ch_T0000171:2;Name=RBMY3AP;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6287500	6290312	.	-	.	source_gene_common_name=TSPY9;source_gene=hg002_chrY_paternal_240;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;gene_id=NA19239_ch_G0000054;gene_biotype=protein_coding;gene_name=TSPY9;gene_sources=liftoff,augTM;ID=NA19239_ch_G0000054;Name=TSPY9
NA19239_chrY	CAT	transcript	6287500	6290312	100	-	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000172;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_G0000054;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=NA19239_ch_T0000172;Name=TSPY9
NA19239_chrY	CAT	exon	6287500	6287710	.	-	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000172;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_T0000172;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:NA19239_ch_T0000172:0;Name=TSPY9;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6287688	6287710	.	-	2	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000172;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_T0000172;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:NA19239_ch_T0000172:0;Name=TSPY9;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6287688	6287690	.	-	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000172;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_T0000172;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=stop_codon:NA19239_ch_T0000172;Name=TSPY9;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6287711	6288402	.	-	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000172;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_T0000172;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:NA19239_ch_T0000172:0;Name=TSPY9;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6288403	6288484	.	-	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000172;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_T0000172;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:NA19239_ch_T0000172:1;Name=TSPY9;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6288403	6288484	.	-	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000172;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_T0000172;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:NA19239_ch_T0000172:1;Name=TSPY9;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6288485	6288590	.	-	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000172;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_T0000172;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:NA19239_ch_T0000172:1;Name=TSPY9;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6288591	6288736	.	-	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000172;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_T0000172;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:NA19239_ch_T0000172:2;Name=TSPY9;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6288591	6288736	.	-	2	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000172;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_T0000172;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:NA19239_ch_T0000172:2;Name=TSPY9;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6288737	6288837	.	-	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000172;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_T0000172;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:NA19239_ch_T0000172:2;Name=TSPY9;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6288838	6288949	.	-	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000172;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_T0000172;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:NA19239_ch_T0000172:3;Name=TSPY9;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6288838	6288949	.	-	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000172;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_T0000172;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:NA19239_ch_T0000172:3;Name=TSPY9;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6288950	6289077	.	-	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000172;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_T0000172;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:NA19239_ch_T0000172:3;Name=TSPY9;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6289078	6289155	.	-	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000172;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_T0000172;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:NA19239_ch_T0000172:4;Name=TSPY9;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6289078	6289155	.	-	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000172;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_T0000172;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:NA19239_ch_T0000172:4;Name=TSPY9;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6289156	6289762	.	-	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000172;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_T0000172;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:NA19239_ch_T0000172:4;Name=TSPY9;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6289763	6290312	.	-	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000172;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_T0000172;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:NA19239_ch_T0000172:5;Name=TSPY9;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6289763	6290266	.	-	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000172;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_T0000172;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:NA19239_ch_T0000172:5;Name=TSPY9;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6290264	6290266	.	-	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000172;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_T0000172;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=start_codon:NA19239_ch_T0000172;Name=TSPY9;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6287500	6290312	100	-	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000173;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_G0000054;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=NA19239_ch_T0000173;Name=TSPY9
NA19239_chrY	CAT	exon	6287500	6287710	.	-	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000173;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_T0000173;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:NA19239_ch_T0000173:0;Name=TSPY9;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6287711	6288402	.	-	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000173;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_T0000173;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:NA19239_ch_T0000173:0;Name=TSPY9;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6288403	6288495	.	-	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000173;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_T0000173;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:NA19239_ch_T0000173:1;Name=TSPY9;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6288433	6288495	.	-	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000173;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_T0000173;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:NA19239_ch_T0000173:0;Name=TSPY9;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6288433	6288435	.	-	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000173;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_T0000173;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=stop_codon:NA19239_ch_T0000173;Name=TSPY9;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6288496	6288590	.	-	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000173;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_T0000173;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:NA19239_ch_T0000173:1;Name=TSPY9;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6288591	6288736	.	-	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000173;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_T0000173;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:NA19239_ch_T0000173:2;Name=TSPY9;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6288591	6288736	.	-	2	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000173;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_T0000173;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:NA19239_ch_T0000173:1;Name=TSPY9;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6288737	6288837	.	-	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000173;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_T0000173;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:NA19239_ch_T0000173:2;Name=TSPY9;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6288838	6288949	.	-	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000173;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_T0000173;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:NA19239_ch_T0000173:3;Name=TSPY9;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6288838	6288949	.	-	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000173;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_T0000173;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:NA19239_ch_T0000173:2;Name=TSPY9;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6288950	6289077	.	-	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000173;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_T0000173;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:NA19239_ch_T0000173:3;Name=TSPY9;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6289078	6289155	.	-	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000173;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_T0000173;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:NA19239_ch_T0000173:4;Name=TSPY9;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6289078	6289155	.	-	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000173;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_T0000173;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:NA19239_ch_T0000173:3;Name=TSPY9;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6289156	6289762	.	-	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000173;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_T0000173;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:NA19239_ch_T0000173:4;Name=TSPY9;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6289763	6290312	.	-	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000173;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_T0000173;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:NA19239_ch_T0000173:5;Name=TSPY9;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6289763	6290266	.	-	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000173;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_T0000173;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:NA19239_ch_T0000173:4;Name=TSPY9;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6290264	6290266	.	-	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000173;gene_id=NA19239_ch_G0000054;Parent=NA19239_ch_T0000173;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=start_codon:NA19239_ch_T0000173;Name=TSPY9;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6292925	6298512	.	+	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_155;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;gene_id=NA19239_ch_G0000055;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=NA19239_ch_G0000055;Name=FAM197Y3
NA19239_chrY	CAT	transcript	6292925	6298512	1000	+	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=NA19239_ch_T0000174;gene_id=NA19239_ch_G0000055;Parent=NA19239_ch_G0000055;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=NA19239_ch_T0000174;Name=FAM197Y3
NA19239_chrY	CAT	exon	6292925	6293026	.	+	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=NA19239_ch_T0000174;gene_id=NA19239_ch_G0000055;Parent=NA19239_ch_T0000174;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=exon:NA19239_ch_T0000174:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6293027	6293112	.	+	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=NA19239_ch_T0000174;gene_id=NA19239_ch_G0000055;Parent=NA19239_ch_T0000174;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=intron:NA19239_ch_T0000174:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6293113	6293258	.	+	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=NA19239_ch_T0000174;gene_id=NA19239_ch_G0000055;Parent=NA19239_ch_T0000174;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=exon:NA19239_ch_T0000174:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6293259	6294747	.	+	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=NA19239_ch_T0000174;gene_id=NA19239_ch_G0000055;Parent=NA19239_ch_T0000174;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=intron:NA19239_ch_T0000174:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6294748	6294906	.	+	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=NA19239_ch_T0000174;gene_id=NA19239_ch_G0000055;Parent=NA19239_ch_T0000174;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=exon:NA19239_ch_T0000174:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6294907	6298452	.	+	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=NA19239_ch_T0000174;gene_id=NA19239_ch_G0000055;Parent=NA19239_ch_T0000174;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=intron:NA19239_ch_T0000174:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6298453	6298512	.	+	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=NA19239_ch_T0000174;gene_id=NA19239_ch_G0000055;Parent=NA19239_ch_T0000174;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=exon:NA19239_ch_T0000174:3;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6307822	6310618	.	-	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_182;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;gene_id=NA19239_ch_G0000056;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=NA19239_ch_G0000056;Name=TSPY10
NA19239_chrY	CAT	transcript	6307822	6310618	100	-	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=NA19239_ch_T0000175;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_G0000056;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=NA19239_ch_T0000175;Name=TSPY10
NA19239_chrY	CAT	exon	6307822	6308032	.	-	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=NA19239_ch_T0000175;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000175;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000175:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6308010	6308032	.	-	2	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=NA19239_ch_T0000175;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000175;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000175:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6308010	6308012	.	-	0	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=NA19239_ch_T0000175;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000175;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=stop_codon:NA19239_ch_T0000175;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6308033	6308726	.	-	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=NA19239_ch_T0000175;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000175;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000175:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6308727	6308808	.	-	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=NA19239_ch_T0000175;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000175;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000175:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6308727	6308808	.	-	0	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=NA19239_ch_T0000175;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000175;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000175:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6308809	6308914	.	-	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=NA19239_ch_T0000175;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000175;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000175:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6308915	6309060	.	-	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=NA19239_ch_T0000175;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000175;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000175:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6308915	6309060	.	-	2	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=NA19239_ch_T0000175;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000175;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000175:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6309061	6309161	.	-	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=NA19239_ch_T0000175;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000175;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000175:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6309162	6309273	.	-	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=NA19239_ch_T0000175;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000175;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000175:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6309162	6309273	.	-	0	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=NA19239_ch_T0000175;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000175;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000175:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6309274	6309401	.	-	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=NA19239_ch_T0000175;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000175;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000175:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6309402	6309479	.	-	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=NA19239_ch_T0000175;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000175;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000175:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6309402	6309479	.	-	0	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=NA19239_ch_T0000175;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000175;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000175:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6309480	6310086	.	-	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=NA19239_ch_T0000175;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000175;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000175:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6310087	6310618	.	-	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=NA19239_ch_T0000175;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000175;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000175:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6310087	6310572	.	-	0	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=NA19239_ch_T0000175;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000175;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000175:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6310570	6310572	.	-	0	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;transcript_id=NA19239_ch_T0000175;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000175;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=start_codon:NA19239_ch_T0000175;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6307822	6310618	100	-	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;transcript_id=NA19239_ch_T0000176;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_G0000056;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=NA19239_ch_T0000176;Name=TSPY10
NA19239_chrY	CAT	exon	6307822	6308032	.	-	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;transcript_id=NA19239_ch_T0000176;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000176;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000176:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6308033	6308726	.	-	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;transcript_id=NA19239_ch_T0000176;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000176;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000176:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6308727	6308819	.	-	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;transcript_id=NA19239_ch_T0000176;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000176;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000176:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6308757	6308819	.	-	0	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;transcript_id=NA19239_ch_T0000176;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000176;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000176:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6308757	6308759	.	-	0	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;transcript_id=NA19239_ch_T0000176;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000176;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=stop_codon:NA19239_ch_T0000176;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6308820	6308914	.	-	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;transcript_id=NA19239_ch_T0000176;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000176;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000176:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6308915	6309060	.	-	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;transcript_id=NA19239_ch_T0000176;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000176;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000176:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6308915	6309060	.	-	2	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;transcript_id=NA19239_ch_T0000176;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000176;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000176:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6309061	6309161	.	-	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;transcript_id=NA19239_ch_T0000176;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000176;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000176:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6309162	6309273	.	-	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;transcript_id=NA19239_ch_T0000176;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000176;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000176:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6309162	6309273	.	-	0	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;transcript_id=NA19239_ch_T0000176;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000176;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000176:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6309274	6309401	.	-	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;transcript_id=NA19239_ch_T0000176;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000176;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000176:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6309402	6309479	.	-	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;transcript_id=NA19239_ch_T0000176;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000176;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000176:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6309402	6309479	.	-	0	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;transcript_id=NA19239_ch_T0000176;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000176;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000176:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6309480	6310086	.	-	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;transcript_id=NA19239_ch_T0000176;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000176;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000176:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6310087	6310618	.	-	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;transcript_id=NA19239_ch_T0000176;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000176;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000176:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6310087	6310572	.	-	0	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;transcript_id=NA19239_ch_T0000176;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000176;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000176:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6310570	6310572	.	-	0	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;transcript_id=NA19239_ch_T0000176;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000176;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=start_codon:NA19239_ch_T0000176;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6307822	6310618	100	-	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;transcript_id=NA19239_ch_T0000177;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_G0000056;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=NA19239_ch_T0000177;Name=TSPY10
NA19239_chrY	CAT	exon	6307822	6308032	.	-	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;transcript_id=NA19239_ch_T0000177;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000177;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000177:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6308033	6308726	.	-	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;transcript_id=NA19239_ch_T0000177;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000177;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000177:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6308727	6308808	.	-	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;transcript_id=NA19239_ch_T0000177;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000177;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000177:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6308757	6308808	.	-	1	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;transcript_id=NA19239_ch_T0000177;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000177;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000177:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6308757	6308759	.	-	0	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;transcript_id=NA19239_ch_T0000177;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000177;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=stop_codon:NA19239_ch_T0000177;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6308809	6308914	.	-	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;transcript_id=NA19239_ch_T0000177;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000177;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000177:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6308915	6309053	.	-	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;transcript_id=NA19239_ch_T0000177;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000177;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000177:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6308915	6309053	.	-	2	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;transcript_id=NA19239_ch_T0000177;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000177;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000177:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6309054	6309161	.	-	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;transcript_id=NA19239_ch_T0000177;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000177;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000177:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6309162	6309273	.	-	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;transcript_id=NA19239_ch_T0000177;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000177;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000177:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6309162	6309273	.	-	0	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;transcript_id=NA19239_ch_T0000177;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000177;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000177:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6309274	6309401	.	-	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;transcript_id=NA19239_ch_T0000177;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000177;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000177:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6309402	6309479	.	-	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;transcript_id=NA19239_ch_T0000177;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000177;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000177:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6309402	6309479	.	-	0	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;transcript_id=NA19239_ch_T0000177;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000177;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000177:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6309480	6310086	.	-	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;transcript_id=NA19239_ch_T0000177;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000177;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000177:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6310087	6310618	.	-	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;transcript_id=NA19239_ch_T0000177;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000177;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000177:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6310087	6310572	.	-	0	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;transcript_id=NA19239_ch_T0000177;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000177;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000177:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6310570	6310572	.	-	0	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;transcript_id=NA19239_ch_T0000177;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000177;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=start_codon:NA19239_ch_T0000177;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6307822	6310618	1000	-	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;transcript_id=NA19239_ch_T0000178;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_G0000056;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=NA19239_ch_T0000178;Name=TSPY10
NA19239_chrY	CAT	exon	6307822	6308032	.	-	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;transcript_id=NA19239_ch_T0000178;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000178;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000178:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6308033	6308726	.	-	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;transcript_id=NA19239_ch_T0000178;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000178;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000178:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6308727	6308819	.	-	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;transcript_id=NA19239_ch_T0000178;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000178;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000178:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6308820	6308914	.	-	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;transcript_id=NA19239_ch_T0000178;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000178;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000178:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6308915	6309053	.	-	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;transcript_id=NA19239_ch_T0000178;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000178;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000178:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6309054	6309161	.	-	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;transcript_id=NA19239_ch_T0000178;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000178;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000178:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6309162	6309273	.	-	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;transcript_id=NA19239_ch_T0000178;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000178;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000178:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6309274	6309401	.	-	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;transcript_id=NA19239_ch_T0000178;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000178;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000178:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6309402	6309479	.	-	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;transcript_id=NA19239_ch_T0000178;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000178;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000178:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6309480	6310086	.	-	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;transcript_id=NA19239_ch_T0000178;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000178;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000178:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6310087	6310618	.	-	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;transcript_id=NA19239_ch_T0000178;gene_id=NA19239_ch_G0000056;Parent=NA19239_ch_T0000178;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000178:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6313228	6318832	.	+	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_237;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;gene_id=NA19239_ch_G0000057;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=NA19239_ch_G0000057;Name=FAM197Y3
NA19239_chrY	CAT	transcript	6313228	6318832	1000	+	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=NA19239_ch_T0000179;gene_id=NA19239_ch_G0000057;Parent=NA19239_ch_G0000057;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=NA19239_ch_T0000179;Name=FAM197Y3
NA19239_chrY	CAT	exon	6313228	6313329	.	+	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=NA19239_ch_T0000179;gene_id=NA19239_ch_G0000057;Parent=NA19239_ch_T0000179;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=exon:NA19239_ch_T0000179:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6313330	6313415	.	+	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=NA19239_ch_T0000179;gene_id=NA19239_ch_G0000057;Parent=NA19239_ch_T0000179;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=intron:NA19239_ch_T0000179:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6313416	6313561	.	+	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=NA19239_ch_T0000179;gene_id=NA19239_ch_G0000057;Parent=NA19239_ch_T0000179;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=exon:NA19239_ch_T0000179:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6313562	6315064	.	+	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=NA19239_ch_T0000179;gene_id=NA19239_ch_G0000057;Parent=NA19239_ch_T0000179;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=intron:NA19239_ch_T0000179:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6315065	6315223	.	+	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=NA19239_ch_T0000179;gene_id=NA19239_ch_G0000057;Parent=NA19239_ch_T0000179;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=exon:NA19239_ch_T0000179:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6315224	6318772	.	+	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=NA19239_ch_T0000179;gene_id=NA19239_ch_G0000057;Parent=NA19239_ch_T0000179;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=intron:NA19239_ch_T0000179:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6318773	6318832	.	+	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=NA19239_ch_T0000179;gene_id=NA19239_ch_G0000057;Parent=NA19239_ch_T0000179;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=exon:NA19239_ch_T0000179:3;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6328142	6330938	.	-	.	source_gene_common_name=TSPY10P;source_gene=hg002_chrY_paternal_236;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;gene_id=NA19239_ch_G0000058;gene_biotype=pseudogene;gene_name=TSPY10P;gene_sources=liftoff,augTM;ID=NA19239_ch_G0000058;Name=TSPY10P
NA19239_chrY	CAT	transcript	6328142	6330938	1000	-	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000180;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_G0000058;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=NA19239_ch_T0000180;Name=TSPY10P
NA19239_chrY	CAT	exon	6328142	6328352	.	-	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000180;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000180;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19239_ch_T0000180:0;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6328353	6329046	.	-	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000180;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000180;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19239_ch_T0000180:0;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6329047	6329128	.	-	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000180;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000180;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19239_ch_T0000180:1;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6329129	6329234	.	-	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000180;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000180;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19239_ch_T0000180:1;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6329235	6329380	.	-	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000180;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000180;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19239_ch_T0000180:2;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6329346	6329380	.	-	2	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000180;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000180;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:NA19239_ch_T0000180:0;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6329346	6329348	.	-	0	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000180;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000180;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=stop_codon:NA19239_ch_T0000180;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6329381	6329481	.	-	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000180;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000180;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19239_ch_T0000180:2;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6329482	6329593	.	-	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000180;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000180;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19239_ch_T0000180:3;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6329482	6329593	.	-	0	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000180;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000180;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:NA19239_ch_T0000180:1;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6329594	6329721	.	-	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000180;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000180;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19239_ch_T0000180:3;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6329722	6329799	.	-	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000180;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000180;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19239_ch_T0000180:4;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6329722	6329799	.	-	0	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000180;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000180;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:NA19239_ch_T0000180:2;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6329800	6330406	.	-	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000180;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000180;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19239_ch_T0000180:4;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6330407	6330938	.	-	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000180;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000180;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19239_ch_T0000180:5;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6330407	6330892	.	-	0	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000180;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000180;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:NA19239_ch_T0000180:3;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6330890	6330892	.	-	0	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000180;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000180;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=start_codon:NA19239_ch_T0000180;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6328142	6330938	1000	-	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000181;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_G0000058;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=NA19239_ch_T0000181;Name=TSPY10P
NA19239_chrY	CAT	exon	6328142	6328352	.	-	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000181;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000181;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19239_ch_T0000181:0;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6328353	6329046	.	-	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000181;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000181;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19239_ch_T0000181:0;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6329047	6329139	.	-	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000181;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000181;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19239_ch_T0000181:1;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6329140	6329234	.	-	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000181;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000181;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19239_ch_T0000181:1;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6329235	6329380	.	-	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000181;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000181;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19239_ch_T0000181:2;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6329346	6329380	.	-	2	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000181;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000181;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:NA19239_ch_T0000181:0;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6329346	6329348	.	-	0	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000181;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000181;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=stop_codon:NA19239_ch_T0000181;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6329381	6329481	.	-	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000181;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000181;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19239_ch_T0000181:2;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6329482	6329593	.	-	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000181;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000181;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19239_ch_T0000181:3;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6329482	6329593	.	-	0	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000181;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000181;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:NA19239_ch_T0000181:1;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6329594	6329721	.	-	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000181;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000181;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19239_ch_T0000181:3;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6329722	6329799	.	-	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000181;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000181;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19239_ch_T0000181:4;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6329722	6329799	.	-	0	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000181;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000181;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:NA19239_ch_T0000181:2;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6329800	6330406	.	-	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000181;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000181;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19239_ch_T0000181:4;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6330407	6330938	.	-	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000181;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000181;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19239_ch_T0000181:5;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6330407	6330892	.	-	0	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000181;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000181;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:NA19239_ch_T0000181:3;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6330890	6330892	.	-	0	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000181;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000181;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=start_codon:NA19239_ch_T0000181;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6328142	6330938	1000	-	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000182;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_G0000058;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=NA19239_ch_T0000182;Name=TSPY10P
NA19239_chrY	CAT	exon	6328142	6328352	.	-	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000182;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000182;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19239_ch_T0000182:0;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6328353	6329046	.	-	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000182;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000182;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19239_ch_T0000182:0;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6329047	6329128	.	-	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000182;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000182;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19239_ch_T0000182:1;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6329077	6329128	.	-	1	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000182;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000182;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:NA19239_ch_T0000182:0;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6329077	6329079	.	-	0	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000182;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000182;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=stop_codon:NA19239_ch_T0000182;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6329129	6329234	.	-	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000182;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000182;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19239_ch_T0000182:1;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6329235	6329373	.	-	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000182;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000182;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19239_ch_T0000182:2;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6329235	6329373	.	-	2	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000182;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000182;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:NA19239_ch_T0000182:1;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6329374	6329481	.	-	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000182;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000182;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19239_ch_T0000182:2;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6329482	6329593	.	-	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000182;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000182;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19239_ch_T0000182:3;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6329482	6329593	.	-	0	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000182;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000182;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:NA19239_ch_T0000182:2;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6329594	6329721	.	-	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000182;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000182;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19239_ch_T0000182:3;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6329722	6329799	.	-	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000182;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000182;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19239_ch_T0000182:4;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6329722	6329799	.	-	0	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000182;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000182;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:NA19239_ch_T0000182:3;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6329800	6330406	.	-	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000182;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000182;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19239_ch_T0000182:4;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6330407	6330938	.	-	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000182;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000182;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19239_ch_T0000182:5;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6330407	6330892	.	-	0	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000182;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000182;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:NA19239_ch_T0000182:4;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6330890	6330892	.	-	0	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000182;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000182;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=start_codon:NA19239_ch_T0000182;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6328142	6330938	1000	-	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000183;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_G0000058;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=NA19239_ch_T0000183;Name=TSPY10P
NA19239_chrY	CAT	exon	6328142	6328352	.	-	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000183;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000183;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19239_ch_T0000183:0;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6328353	6329046	.	-	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000183;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000183;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19239_ch_T0000183:0;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6329047	6329139	.	-	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000183;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000183;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19239_ch_T0000183:1;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6329140	6329234	.	-	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000183;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000183;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19239_ch_T0000183:1;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6329235	6329373	.	-	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000183;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000183;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19239_ch_T0000183:2;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6329374	6329481	.	-	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000183;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000183;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19239_ch_T0000183:2;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6329482	6329593	.	-	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000183;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000183;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19239_ch_T0000183:3;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6329594	6329721	.	-	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000183;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000183;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19239_ch_T0000183:3;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6329722	6329799	.	-	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000183;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000183;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19239_ch_T0000183:4;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6329800	6330406	.	-	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000183;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000183;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19239_ch_T0000183:4;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6330407	6330938	.	-	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000183;gene_id=NA19239_ch_G0000058;Parent=NA19239_ch_T0000183;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19239_ch_T0000183:5;Name=TSPY10P;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6333551	6339155	.	+	.	source_gene_common_name=FAM197Y5;source_gene=hg002_chrY_paternal_205;gene_id=NA19239_ch_G0000059;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=NA19239_ch_G0000059;Name=FAM197Y5
NA19239_chrY	CAT	transcript	6333551	6339155	1000	+	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA19239_ch_T0000184;gene_id=NA19239_ch_G0000059;Parent=NA19239_ch_G0000059;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=NA19239_ch_T0000184;Name=FAM197Y5
NA19239_chrY	CAT	exon	6333551	6333652	.	+	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA19239_ch_T0000184;gene_id=NA19239_ch_G0000059;Parent=NA19239_ch_T0000184;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=exon:NA19239_ch_T0000184:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6333653	6333738	.	+	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA19239_ch_T0000184;gene_id=NA19239_ch_G0000059;Parent=NA19239_ch_T0000184;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=intron:NA19239_ch_T0000184:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6333739	6333884	.	+	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA19239_ch_T0000184;gene_id=NA19239_ch_G0000059;Parent=NA19239_ch_T0000184;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=exon:NA19239_ch_T0000184:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6333885	6335386	.	+	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA19239_ch_T0000184;gene_id=NA19239_ch_G0000059;Parent=NA19239_ch_T0000184;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=intron:NA19239_ch_T0000184:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6335387	6335545	.	+	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA19239_ch_T0000184;gene_id=NA19239_ch_G0000059;Parent=NA19239_ch_T0000184;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=exon:NA19239_ch_T0000184:2;Name=FAM197Y5;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6335546	6339095	.	+	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA19239_ch_T0000184;gene_id=NA19239_ch_G0000059;Parent=NA19239_ch_T0000184;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=intron:NA19239_ch_T0000184:2;Name=FAM197Y5;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6339096	6339155	.	+	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA19239_ch_T0000184;gene_id=NA19239_ch_G0000059;Parent=NA19239_ch_T0000184;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=exon:NA19239_ch_T0000184:3;Name=FAM197Y5;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6348432	6351226	.	-	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_206;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;gene_id=NA19239_ch_G0000060;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=NA19239_ch_G0000060;Name=TSPY4
NA19239_chrY	CAT	transcript	6348432	6351226	100	-	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=NA19239_ch_T0000185;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_G0000060;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=NA19239_ch_T0000185;Name=TSPY4
NA19239_chrY	CAT	exon	6348432	6348642	.	-	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=NA19239_ch_T0000185;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000185;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000185:0;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6348620	6348642	.	-	2	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=NA19239_ch_T0000185;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000185;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000185:0;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6348620	6348622	.	-	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=NA19239_ch_T0000185;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000185;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=stop_codon:NA19239_ch_T0000185;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6348643	6349334	.	-	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=NA19239_ch_T0000185;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000185;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000185:0;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6349335	6349416	.	-	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=NA19239_ch_T0000185;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000185;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000185:1;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6349335	6349416	.	-	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=NA19239_ch_T0000185;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000185;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000185:1;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6349417	6349522	.	-	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=NA19239_ch_T0000185;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000185;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000185:1;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6349523	6349668	.	-	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=NA19239_ch_T0000185;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000185;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000185:2;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6349523	6349668	.	-	2	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=NA19239_ch_T0000185;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000185;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000185:2;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6349669	6349769	.	-	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=NA19239_ch_T0000185;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000185;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000185:2;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6349770	6349881	.	-	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=NA19239_ch_T0000185;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000185;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000185:3;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6349770	6349881	.	-	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=NA19239_ch_T0000185;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000185;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000185:3;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6349882	6350009	.	-	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=NA19239_ch_T0000185;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000185;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000185:3;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6350010	6350087	.	-	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=NA19239_ch_T0000185;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000185;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000185:4;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6350010	6350087	.	-	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=NA19239_ch_T0000185;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000185;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000185:4;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6350088	6350694	.	-	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=NA19239_ch_T0000185;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000185;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000185:4;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6350695	6351226	.	-	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=NA19239_ch_T0000185;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000185;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000185:5;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6350695	6351180	.	-	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=NA19239_ch_T0000185;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000185;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000185:5;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6351178	6351180	.	-	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=NA19239_ch_T0000185;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000185;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=start_codon:NA19239_ch_T0000185;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6348432	6351226	100	-	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=NA19239_ch_T0000186;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_G0000060;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=NA19239_ch_T0000186;Name=TSPY4
NA19239_chrY	CAT	exon	6348432	6348642	.	-	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=NA19239_ch_T0000186;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000186;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000186:0;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6348643	6349334	.	-	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=NA19239_ch_T0000186;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000186;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000186:0;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6349335	6349427	.	-	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=NA19239_ch_T0000186;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000186;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000186:1;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6349365	6349427	.	-	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=NA19239_ch_T0000186;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000186;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000186:0;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6349365	6349367	.	-	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=NA19239_ch_T0000186;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000186;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=stop_codon:NA19239_ch_T0000186;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6349428	6349522	.	-	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=NA19239_ch_T0000186;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000186;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000186:1;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6349523	6349668	.	-	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=NA19239_ch_T0000186;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000186;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000186:2;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6349523	6349668	.	-	2	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=NA19239_ch_T0000186;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000186;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000186:1;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6349669	6349769	.	-	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=NA19239_ch_T0000186;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000186;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000186:2;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6349770	6349881	.	-	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=NA19239_ch_T0000186;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000186;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000186:3;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6349770	6349881	.	-	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=NA19239_ch_T0000186;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000186;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000186:2;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6349882	6350009	.	-	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=NA19239_ch_T0000186;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000186;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000186:3;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6350010	6350087	.	-	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=NA19239_ch_T0000186;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000186;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000186:4;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6350010	6350087	.	-	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=NA19239_ch_T0000186;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000186;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000186:3;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6350088	6350694	.	-	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=NA19239_ch_T0000186;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000186;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000186:4;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6350695	6351226	.	-	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=NA19239_ch_T0000186;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000186;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000186:5;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6350695	6351180	.	-	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=NA19239_ch_T0000186;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000186;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000186:4;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6351178	6351180	.	-	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=NA19239_ch_T0000186;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000186;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=start_codon:NA19239_ch_T0000186;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6348432	6351226	100	-	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=NA19239_ch_T0000187;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_G0000060;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=NA19239_ch_T0000187;Name=TSPY4
NA19239_chrY	CAT	exon	6348432	6348642	.	-	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=NA19239_ch_T0000187;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000187;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000187:0;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6348643	6349334	.	-	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=NA19239_ch_T0000187;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000187;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000187:0;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6349335	6349416	.	-	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=NA19239_ch_T0000187;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000187;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000187:1;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6349365	6349416	.	-	1	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=NA19239_ch_T0000187;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000187;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000187:0;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6349365	6349367	.	-	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=NA19239_ch_T0000187;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000187;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=stop_codon:NA19239_ch_T0000187;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6349417	6349522	.	-	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=NA19239_ch_T0000187;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000187;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000187:1;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6349523	6349661	.	-	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=NA19239_ch_T0000187;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000187;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000187:2;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6349523	6349661	.	-	2	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=NA19239_ch_T0000187;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000187;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000187:1;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6349662	6349769	.	-	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=NA19239_ch_T0000187;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000187;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000187:2;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6349770	6349881	.	-	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=NA19239_ch_T0000187;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000187;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000187:3;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6349770	6349881	.	-	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=NA19239_ch_T0000187;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000187;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000187:2;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6349882	6350009	.	-	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=NA19239_ch_T0000187;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000187;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000187:3;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6350010	6350087	.	-	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=NA19239_ch_T0000187;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000187;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000187:4;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6350010	6350087	.	-	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=NA19239_ch_T0000187;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000187;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000187:3;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6350088	6350694	.	-	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=NA19239_ch_T0000187;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000187;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000187:4;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6350695	6351226	.	-	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=NA19239_ch_T0000187;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000187;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000187:5;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6350695	6351180	.	-	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=NA19239_ch_T0000187;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000187;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000187:4;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6351178	6351180	.	-	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=NA19239_ch_T0000187;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000187;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=start_codon:NA19239_ch_T0000187;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6348432	6351226	1000	-	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;transcript_id=NA19239_ch_T0000188;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_G0000060;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=NA19239_ch_T0000188;Name=TSPY4
NA19239_chrY	CAT	exon	6348432	6348642	.	-	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;transcript_id=NA19239_ch_T0000188;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000188;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:NA19239_ch_T0000188:0;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6348643	6349334	.	-	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;transcript_id=NA19239_ch_T0000188;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000188;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:NA19239_ch_T0000188:0;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6349335	6349427	.	-	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;transcript_id=NA19239_ch_T0000188;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000188;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:NA19239_ch_T0000188:1;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6349428	6349522	.	-	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;transcript_id=NA19239_ch_T0000188;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000188;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:NA19239_ch_T0000188:1;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6349523	6349661	.	-	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;transcript_id=NA19239_ch_T0000188;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000188;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:NA19239_ch_T0000188:2;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6349662	6349769	.	-	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;transcript_id=NA19239_ch_T0000188;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000188;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:NA19239_ch_T0000188:2;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6349770	6349881	.	-	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;transcript_id=NA19239_ch_T0000188;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000188;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:NA19239_ch_T0000188:3;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6349882	6350009	.	-	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;transcript_id=NA19239_ch_T0000188;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000188;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:NA19239_ch_T0000188:3;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6350010	6350087	.	-	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;transcript_id=NA19239_ch_T0000188;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000188;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:NA19239_ch_T0000188:4;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6350088	6350694	.	-	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;transcript_id=NA19239_ch_T0000188;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000188;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:NA19239_ch_T0000188:4;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6350695	6351226	.	-	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;transcript_id=NA19239_ch_T0000188;gene_id=NA19239_ch_G0000060;Parent=NA19239_ch_T0000188;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:NA19239_ch_T0000188:5;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6353750	6359439	.	+	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_207;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;gene_id=NA19239_ch_G0000061;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=NA19239_ch_G0000061;Name=FAM197Y2
NA19239_chrY	CAT	transcript	6353750	6359439	1000	+	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=NA19239_ch_T0000189;gene_id=NA19239_ch_G0000061;Parent=NA19239_ch_G0000061;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=NA19239_ch_T0000189;Name=FAM197Y2
NA19239_chrY	CAT	exon	6353750	6353940	.	+	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=NA19239_ch_T0000189;gene_id=NA19239_ch_G0000061;Parent=NA19239_ch_T0000189;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000189:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6353941	6354026	.	+	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=NA19239_ch_T0000189;gene_id=NA19239_ch_G0000061;Parent=NA19239_ch_T0000189;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000189:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6354027	6354172	.	+	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=NA19239_ch_T0000189;gene_id=NA19239_ch_G0000061;Parent=NA19239_ch_T0000189;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000189:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6354173	6355670	.	+	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=NA19239_ch_T0000189;gene_id=NA19239_ch_G0000061;Parent=NA19239_ch_T0000189;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000189:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6355671	6355829	.	+	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=NA19239_ch_T0000189;gene_id=NA19239_ch_G0000061;Parent=NA19239_ch_T0000189;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000189:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6355830	6359379	.	+	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=NA19239_ch_T0000189;gene_id=NA19239_ch_G0000061;Parent=NA19239_ch_T0000189;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000189:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6359380	6359439	.	+	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=NA19239_ch_T0000189;gene_id=NA19239_ch_G0000061;Parent=NA19239_ch_T0000189;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000189:3;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6368710	6371471	.	-	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_232;gene_id=NA19239_ch_G0000062;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=augTM,transMap,transMap_pairwise;ID=NA19239_ch_G0000062;Name=TSPY1
NA19239_chrY	CAT	transcript	6368710	6371471	9870	-	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=199.661;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000190;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_G0000062;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=NA19239_ch_T0000190;Name=TSPY1
NA19239_chrY	CAT	exon	6368710	6368920	.	-	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=199.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000190;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000190;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000190:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6368921	6369614	.	-	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=199.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000190;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000190;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000190:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6369615	6369707	.	-	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=199.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000190;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000190;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000190:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6369645	6369707	.	-	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=199.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000190;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000190;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000190:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6369645	6369647	.	-	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=199.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000190;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000190;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=stop_codon:NA19239_ch_T0000190;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6369708	6369802	.	-	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=199.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000190;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000190;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000190:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6369803	6369948	.	-	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=199.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000190;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000190;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000190:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6369803	6369948	.	-	2	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=199.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000190;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000190;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000190:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6369949	6370049	.	-	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=199.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000190;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000190;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000190:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6370050	6370161	.	-	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=199.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000190;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000190;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000190:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6370050	6370161	.	-	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=199.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000190;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000190;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000190:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6370162	6370289	.	-	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=199.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000190;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000190;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000190:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6370290	6370367	.	-	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=199.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000190;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000190;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000190:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6370290	6370367	.	-	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=199.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000190;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000190;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000190:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6370368	6370974	.	-	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=199.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000190;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000190;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000190:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6370975	6371471	.	-	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=199.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000190;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000190;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000190:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6370975	6371460	.	-	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=199.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000190;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000190;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000190:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6371458	6371460	.	-	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=199.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000190;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000190;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=start_codon:NA19239_ch_T0000190;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6368710	6371471	9840	-	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=199.7;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000191;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_G0000062;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=NA19239_ch_T0000191;Name=TSPY1
NA19239_chrY	CAT	exon	6368710	6368920	.	-	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=199.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000191;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000191;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000191:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6368898	6368920	.	-	2	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=199.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000191;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000191;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000191:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6368898	6368900	.	-	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=199.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000191;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000191;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=stop_codon:NA19239_ch_T0000191;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6368921	6369614	.	-	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=199.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000191;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000191;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000191:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6369615	6369696	.	-	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=199.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000191;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000191;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000191:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6369615	6369696	.	-	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=199.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000191;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000191;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000191:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6369697	6369802	.	-	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=199.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000191;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000191;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000191:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6369803	6369948	.	-	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=199.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000191;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000191;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000191:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6369803	6369948	.	-	2	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=199.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000191;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000191;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000191:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6369949	6370049	.	-	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=199.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000191;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000191;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000191:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6370050	6370161	.	-	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=199.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000191;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000191;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000191:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6370050	6370161	.	-	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=199.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000191;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000191;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000191:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6370162	6370289	.	-	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=199.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000191;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000191;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000191:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6370290	6370367	.	-	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=199.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000191;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000191;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000191:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6370290	6370367	.	-	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=199.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000191;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000191;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000191:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6370368	6370974	.	-	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=199.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000191;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000191;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000191:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6370975	6371112	.	-	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=199.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000191;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000191;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000191:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6370975	6371112	.	-	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=199.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000191;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000191;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000191:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6371113	6371373	.	-	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=199.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000191;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000191;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000191:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6371374	6371471	.	-	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=199.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000191;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000191;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000191:6;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6371374	6371460	.	-	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=199.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000191;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000191;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000191:6;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6371458	6371460	.	-	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=199.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000191;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000191;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=start_codon:NA19239_ch_T0000191;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6368710	6371471	9860	-	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=199.676;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000192;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_G0000062;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=NA19239_ch_T0000192;Name=TSPY1
NA19239_chrY	CAT	exon	6368710	6368920	.	-	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=199.676;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000192;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000192;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000192:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6368898	6368920	.	-	2	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=199.676;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000192;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000192;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000192:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6368898	6368900	.	-	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=199.676;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000192;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000192;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=stop_codon:NA19239_ch_T0000192;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6368921	6369614	.	-	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=199.676;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000192;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000192;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000192:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6369615	6369696	.	-	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=199.676;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000192;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000192;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000192:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6369615	6369696	.	-	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=199.676;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000192;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000192;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000192:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6369697	6369802	.	-	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=199.676;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000192;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000192;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000192:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6369803	6369948	.	-	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=199.676;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000192;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000192;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000192:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6369803	6369948	.	-	2	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=199.676;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000192;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000192;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000192:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6369949	6370049	.	-	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=199.676;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000192;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000192;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000192:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6370050	6370161	.	-	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=199.676;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000192;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000192;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000192:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6370050	6370161	.	-	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=199.676;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000192;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000192;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000192:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6370162	6370289	.	-	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=199.676;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000192;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000192;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000192:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6370290	6370367	.	-	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=199.676;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000192;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000192;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000192:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6370290	6370367	.	-	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=199.676;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000192;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000192;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000192:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6370368	6370974	.	-	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=199.676;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000192;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000192;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000192:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6370975	6371471	.	-	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=199.676;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000192;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000192;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000192:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6370975	6371460	.	-	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=199.676;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000192;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000192;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000192:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6371458	6371460	.	-	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=199.676;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000192;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000192;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=start_codon:NA19239_ch_T0000192;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6368710	6371471	9860	-	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=199.654;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000193;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_G0000062;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=NA19239_ch_T0000193;Name=TSPY1
NA19239_chrY	CAT	exon	6368710	6368920	.	-	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=199.654;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000193;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000193;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000193:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6368921	6369614	.	-	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=199.654;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000193;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000193;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000193:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6369615	6369696	.	-	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=199.654;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000193;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000193;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000193:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6369645	6369696	.	-	1	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=199.654;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000193;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000193;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000193:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6369645	6369647	.	-	0	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=199.654;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000193;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000193;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=stop_codon:NA19239_ch_T0000193;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6369697	6369802	.	-	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=199.654;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000193;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000193;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000193:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6369803	6369941	.	-	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=199.654;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000193;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000193;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000193:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6369803	6369941	.	-	2	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=199.654;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000193;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000193;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000193:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6369942	6370049	.	-	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=199.654;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000193;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000193;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000193:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6370050	6370161	.	-	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=199.654;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000193;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000193;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000193:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6370050	6370161	.	-	0	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=199.654;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000193;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000193;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000193:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6370162	6370289	.	-	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=199.654;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000193;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000193;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000193:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6370290	6370367	.	-	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=199.654;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000193;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000193;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000193:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6370290	6370367	.	-	0	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=199.654;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000193;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000193;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000193:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6370368	6370974	.	-	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=199.654;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000193;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000193;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000193:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6370975	6371471	.	-	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=199.654;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000193;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000193;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000193:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6370975	6371460	.	-	0	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=199.654;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000193;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000193;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000193:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6371458	6371460	.	-	0	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=199.654;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000193;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000193;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=start_codon:NA19239_ch_T0000193;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6368710	6371471	1000	-	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=296.642;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000194;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_G0000062;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=NA19239_ch_T0000194;Name=TSPY1
NA19239_chrY	CAT	exon	6368710	6368920	.	-	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=296.642;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000194;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000194;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=exon:NA19239_ch_T0000194:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6368921	6369614	.	-	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=296.642;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000194;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000194;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=intron:NA19239_ch_T0000194:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6369615	6369707	.	-	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=296.642;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000194;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000194;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=exon:NA19239_ch_T0000194:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6369708	6369802	.	-	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=296.642;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000194;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000194;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=intron:NA19239_ch_T0000194:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6369803	6369941	.	-	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=296.642;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000194;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000194;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=exon:NA19239_ch_T0000194:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6369942	6370049	.	-	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=296.642;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000194;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000194;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=intron:NA19239_ch_T0000194:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6370050	6370161	.	-	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=296.642;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000194;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000194;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=exon:NA19239_ch_T0000194:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6370162	6370289	.	-	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=296.642;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000194;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000194;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=intron:NA19239_ch_T0000194:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6370290	6370367	.	-	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=296.642;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000194;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000194;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=exon:NA19239_ch_T0000194:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6370368	6370974	.	-	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=296.642;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000194;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000194;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=intron:NA19239_ch_T0000194:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6370975	6371471	.	-	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=296.642;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19239_ch_T0000194;gene_id=NA19239_ch_G0000062;Parent=NA19239_ch_T0000194;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=exon:NA19239_ch_T0000194:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6374119	6379730	.	+	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_239;gene_id=NA19239_ch_G0000063;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=NA19239_ch_G0000063;Name=FAM197Y3
NA19239_chrY	CAT	transcript	6374119	6379730	1000	+	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA19239_ch_T0000195;gene_id=NA19239_ch_G0000063;Parent=NA19239_ch_G0000063;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=NA19239_ch_T0000195;Name=FAM197Y3
NA19239_chrY	CAT	exon	6374119	6374220	.	+	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA19239_ch_T0000195;gene_id=NA19239_ch_G0000063;Parent=NA19239_ch_T0000195;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=exon:NA19239_ch_T0000195:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6374221	6374306	.	+	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA19239_ch_T0000195;gene_id=NA19239_ch_G0000063;Parent=NA19239_ch_T0000195;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=intron:NA19239_ch_T0000195:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6374307	6374452	.	+	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA19239_ch_T0000195;gene_id=NA19239_ch_G0000063;Parent=NA19239_ch_T0000195;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=exon:NA19239_ch_T0000195:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6374453	6375960	.	+	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA19239_ch_T0000195;gene_id=NA19239_ch_G0000063;Parent=NA19239_ch_T0000195;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=intron:NA19239_ch_T0000195:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6375961	6376119	.	+	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA19239_ch_T0000195;gene_id=NA19239_ch_G0000063;Parent=NA19239_ch_T0000195;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=exon:NA19239_ch_T0000195:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6376120	6379670	.	+	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA19239_ch_T0000195;gene_id=NA19239_ch_G0000063;Parent=NA19239_ch_T0000195;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=intron:NA19239_ch_T0000195:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6379671	6379730	.	+	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA19239_ch_T0000195;gene_id=NA19239_ch_G0000063;Parent=NA19239_ch_T0000195;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=exon:NA19239_ch_T0000195:3;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6389002	6391798	.	-	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_214;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_228.1;gene_id=NA19239_ch_G0000064;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=NA19239_ch_G0000064;Name=TSPY1
NA19239_chrY	CAT	transcript	6389002	6391798	9990	-	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=299.892;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_228.1;transcript_id=NA19239_ch_T0000196;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_G0000064;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=NA19239_ch_T0000196;Name=TSPY1
NA19239_chrY	CAT	exon	6389002	6389212	.	-	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_228.1;transcript_id=NA19239_ch_T0000196;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000196;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000196:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6389190	6389212	.	-	2	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_228.1;transcript_id=NA19239_ch_T0000196;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000196;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000196:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6389190	6389192	.	-	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_228.1;transcript_id=NA19239_ch_T0000196;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000196;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=stop_codon:NA19239_ch_T0000196;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6389213	6389906	.	-	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_228.1;transcript_id=NA19239_ch_T0000196;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000196;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000196:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6389907	6389988	.	-	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_228.1;transcript_id=NA19239_ch_T0000196;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000196;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000196:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6389907	6389988	.	-	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_228.1;transcript_id=NA19239_ch_T0000196;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000196;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000196:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6389989	6390094	.	-	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_228.1;transcript_id=NA19239_ch_T0000196;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000196;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000196:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6390095	6390240	.	-	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_228.1;transcript_id=NA19239_ch_T0000196;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000196;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000196:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6390095	6390240	.	-	2	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_228.1;transcript_id=NA19239_ch_T0000196;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000196;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000196:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6390241	6390341	.	-	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_228.1;transcript_id=NA19239_ch_T0000196;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000196;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000196:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6390342	6390453	.	-	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_228.1;transcript_id=NA19239_ch_T0000196;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000196;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000196:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6390342	6390453	.	-	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_228.1;transcript_id=NA19239_ch_T0000196;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000196;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000196:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6390454	6390581	.	-	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_228.1;transcript_id=NA19239_ch_T0000196;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000196;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000196:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6390582	6390659	.	-	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_228.1;transcript_id=NA19239_ch_T0000196;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000196;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000196:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6390582	6390659	.	-	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_228.1;transcript_id=NA19239_ch_T0000196;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000196;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000196:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6390660	6391266	.	-	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_228.1;transcript_id=NA19239_ch_T0000196;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000196;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000196:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6391267	6391798	.	-	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_228.1;transcript_id=NA19239_ch_T0000196;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000196;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000196:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6391267	6391752	.	-	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_228.1;transcript_id=NA19239_ch_T0000196;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000196;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000196:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6391750	6391752	.	-	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_228.1;transcript_id=NA19239_ch_T0000196;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000196;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=start_codon:NA19239_ch_T0000196;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6389002	6391798	9990	-	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=299.887;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_228.2;transcript_id=NA19239_ch_T0000197;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_G0000064;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=NA19239_ch_T0000197;Name=TSPY1
NA19239_chrY	CAT	exon	6389002	6389212	.	-	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_228.2;transcript_id=NA19239_ch_T0000197;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000197;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000197:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6389213	6389906	.	-	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_228.2;transcript_id=NA19239_ch_T0000197;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000197;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000197:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6389907	6389999	.	-	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_228.2;transcript_id=NA19239_ch_T0000197;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000197;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000197:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6389937	6389999	.	-	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_228.2;transcript_id=NA19239_ch_T0000197;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000197;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000197:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6389937	6389939	.	-	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_228.2;transcript_id=NA19239_ch_T0000197;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000197;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=stop_codon:NA19239_ch_T0000197;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6390000	6390094	.	-	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_228.2;transcript_id=NA19239_ch_T0000197;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000197;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000197:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6390095	6390240	.	-	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_228.2;transcript_id=NA19239_ch_T0000197;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000197;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000197:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6390095	6390240	.	-	2	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_228.2;transcript_id=NA19239_ch_T0000197;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000197;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000197:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6390241	6390341	.	-	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_228.2;transcript_id=NA19239_ch_T0000197;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000197;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000197:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6390342	6390453	.	-	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_228.2;transcript_id=NA19239_ch_T0000197;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000197;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000197:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6390342	6390453	.	-	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_228.2;transcript_id=NA19239_ch_T0000197;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000197;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000197:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6390454	6390581	.	-	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_228.2;transcript_id=NA19239_ch_T0000197;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000197;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000197:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6390582	6390659	.	-	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_228.2;transcript_id=NA19239_ch_T0000197;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000197;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000197:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6390582	6390659	.	-	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_228.2;transcript_id=NA19239_ch_T0000197;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000197;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000197:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6390660	6391266	.	-	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_228.2;transcript_id=NA19239_ch_T0000197;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000197;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000197:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6391267	6391798	.	-	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_228.2;transcript_id=NA19239_ch_T0000197;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000197;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000197:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6391267	6391752	.	-	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_228.2;transcript_id=NA19239_ch_T0000197;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000197;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000197:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6391750	6391752	.	-	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_228.2;transcript_id=NA19239_ch_T0000197;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000197;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=start_codon:NA19239_ch_T0000197;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6389002	6391798	9990	-	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=299.885;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_228.3;transcript_id=NA19239_ch_T0000198;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_G0000064;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=NA19239_ch_T0000198;Name=TSPY1
NA19239_chrY	CAT	exon	6389002	6389212	.	-	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_228.3;transcript_id=NA19239_ch_T0000198;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000198;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000198:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6389213	6389906	.	-	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_228.3;transcript_id=NA19239_ch_T0000198;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000198;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000198:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6389907	6389988	.	-	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_228.3;transcript_id=NA19239_ch_T0000198;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000198;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000198:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6389937	6389988	.	-	1	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_228.3;transcript_id=NA19239_ch_T0000198;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000198;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000198:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6389937	6389939	.	-	0	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_228.3;transcript_id=NA19239_ch_T0000198;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000198;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=stop_codon:NA19239_ch_T0000198;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6389989	6390094	.	-	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_228.3;transcript_id=NA19239_ch_T0000198;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000198;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000198:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6390095	6390233	.	-	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_228.3;transcript_id=NA19239_ch_T0000198;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000198;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000198:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6390095	6390233	.	-	2	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_228.3;transcript_id=NA19239_ch_T0000198;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000198;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000198:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6390234	6390341	.	-	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_228.3;transcript_id=NA19239_ch_T0000198;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000198;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000198:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6390342	6390453	.	-	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_228.3;transcript_id=NA19239_ch_T0000198;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000198;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000198:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6390342	6390453	.	-	0	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_228.3;transcript_id=NA19239_ch_T0000198;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000198;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000198:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6390454	6390581	.	-	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_228.3;transcript_id=NA19239_ch_T0000198;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000198;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000198:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6390582	6390659	.	-	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_228.3;transcript_id=NA19239_ch_T0000198;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000198;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000198:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6390582	6390659	.	-	0	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_228.3;transcript_id=NA19239_ch_T0000198;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000198;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000198:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6390660	6391266	.	-	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_228.3;transcript_id=NA19239_ch_T0000198;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000198;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000198:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6391267	6391798	.	-	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_228.3;transcript_id=NA19239_ch_T0000198;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000198;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000198:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6391267	6391752	.	-	0	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_228.3;transcript_id=NA19239_ch_T0000198;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000198;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000198:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6391750	6391752	.	-	0	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_228.3;transcript_id=NA19239_ch_T0000198;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000198;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=start_codon:NA19239_ch_T0000198;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6389002	6391798	1000	-	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_206.4;transcript_id=NA19239_ch_T0000199;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_G0000064;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=NA19239_ch_T0000199;Name=TSPY1
NA19239_chrY	CAT	exon	6389002	6389212	.	-	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_206.4;transcript_id=NA19239_ch_T0000199;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000199;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:NA19239_ch_T0000199:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6389213	6389906	.	-	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_206.4;transcript_id=NA19239_ch_T0000199;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000199;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=intron:NA19239_ch_T0000199:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6389907	6389999	.	-	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_206.4;transcript_id=NA19239_ch_T0000199;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000199;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:NA19239_ch_T0000199:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6390000	6390094	.	-	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_206.4;transcript_id=NA19239_ch_T0000199;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000199;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=intron:NA19239_ch_T0000199:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6390095	6390233	.	-	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_206.4;transcript_id=NA19239_ch_T0000199;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000199;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:NA19239_ch_T0000199:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6390234	6390341	.	-	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_206.4;transcript_id=NA19239_ch_T0000199;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000199;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=intron:NA19239_ch_T0000199:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6390342	6390453	.	-	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_206.4;transcript_id=NA19239_ch_T0000199;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000199;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:NA19239_ch_T0000199:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6390454	6390581	.	-	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_206.4;transcript_id=NA19239_ch_T0000199;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000199;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=intron:NA19239_ch_T0000199:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6390582	6390659	.	-	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_206.4;transcript_id=NA19239_ch_T0000199;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000199;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:NA19239_ch_T0000199:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6390660	6391266	.	-	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_206.4;transcript_id=NA19239_ch_T0000199;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000199;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=intron:NA19239_ch_T0000199:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6391267	6391798	.	-	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_206.4;transcript_id=NA19239_ch_T0000199;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000199;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:NA19239_ch_T0000199:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6389002	6391798	9980	-	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.85;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000200;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_G0000064;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=NA19239_ch_T0000200;Name=TSPY1
NA19239_chrY	CAT	exon	6389002	6389212	.	-	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000200;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000200;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000200:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6389190	6389212	.	-	2	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000200;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000200;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000200:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6389190	6389192	.	-	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000200;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000200;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=stop_codon:NA19239_ch_T0000200;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6389213	6389906	.	-	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000200;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000200;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000200:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6389907	6389988	.	-	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000200;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000200;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000200:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6389907	6389988	.	-	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000200;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000200;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000200:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6389989	6390094	.	-	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000200;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000200;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000200:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6390095	6390240	.	-	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000200;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000200;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000200:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6390095	6390240	.	-	2	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000200;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000200;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000200:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6390241	6390341	.	-	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000200;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000200;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000200:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6390342	6390453	.	-	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000200;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000200;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000200:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6390342	6390453	.	-	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000200;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000200;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000200:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6390454	6390581	.	-	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000200;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000200;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000200:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6390582	6390659	.	-	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000200;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000200;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000200:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6390582	6390659	.	-	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000200;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000200;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000200:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6390660	6391266	.	-	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000200;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000200;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000200:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6391267	6391404	.	-	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000200;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000200;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000200:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6391267	6391404	.	-	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000200;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000200;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000200:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6391405	6391665	.	-	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000200;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000200;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000200:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6391666	6391798	.	-	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000200;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000200;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000200:6;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6391666	6391752	.	-	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000200;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000200;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000200:6;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6391750	6391752	.	-	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000200;gene_id=NA19239_ch_G0000064;Parent=NA19239_ch_T0000200;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=start_codon:NA19239_ch_T0000200;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6394322	6400014	.	+	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_227;alternative_source_transcripts=hg002_chrY_paternal_227.1;gene_id=NA19239_ch_G0000065;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=NA19239_ch_G0000065;Name=FAM197Y2
NA19239_chrY	CAT	transcript	6394322	6400014	1000	+	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_227.1;transcript_id=NA19239_ch_T0000201;gene_id=NA19239_ch_G0000065;Parent=NA19239_ch_G0000065;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=NA19239_ch_T0000201;Name=FAM197Y2
NA19239_chrY	CAT	exon	6394322	6394512	.	+	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_227.1;transcript_id=NA19239_ch_T0000201;gene_id=NA19239_ch_G0000065;Parent=NA19239_ch_T0000201;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000201:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6394513	6394598	.	+	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_227.1;transcript_id=NA19239_ch_T0000201;gene_id=NA19239_ch_G0000065;Parent=NA19239_ch_T0000201;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000201:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6394599	6394744	.	+	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_227.1;transcript_id=NA19239_ch_T0000201;gene_id=NA19239_ch_G0000065;Parent=NA19239_ch_T0000201;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000201:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6394745	6396246	.	+	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_227.1;transcript_id=NA19239_ch_T0000201;gene_id=NA19239_ch_G0000065;Parent=NA19239_ch_T0000201;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000201:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6396247	6396405	.	+	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_227.1;transcript_id=NA19239_ch_T0000201;gene_id=NA19239_ch_G0000065;Parent=NA19239_ch_T0000201;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000201:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6396406	6399954	.	+	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_227.1;transcript_id=NA19239_ch_T0000201;gene_id=NA19239_ch_G0000065;Parent=NA19239_ch_T0000201;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000201:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6399955	6400014	.	+	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_227.1;transcript_id=NA19239_ch_T0000201;gene_id=NA19239_ch_G0000065;Parent=NA19239_ch_T0000201;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000201:3;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6409307	6412103	.	-	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_226;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_226.1;gene_id=NA19239_ch_G0000066;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=NA19239_ch_G0000066;Name=TSPY10
NA19239_chrY	CAT	transcript	6409307	6412103	100	-	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_226.1;transcript_id=NA19239_ch_T0000202;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_G0000066;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=NA19239_ch_T0000202;Name=TSPY10
NA19239_chrY	CAT	exon	6409307	6409517	.	-	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_226.1;transcript_id=NA19239_ch_T0000202;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000202;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000202:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6409495	6409517	.	-	2	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_226.1;transcript_id=NA19239_ch_T0000202;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000202;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000202:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6409495	6409497	.	-	0	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_226.1;transcript_id=NA19239_ch_T0000202;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000202;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=stop_codon:NA19239_ch_T0000202;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6409518	6410211	.	-	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_226.1;transcript_id=NA19239_ch_T0000202;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000202;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000202:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6410212	6410293	.	-	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_226.1;transcript_id=NA19239_ch_T0000202;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000202;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000202:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6410212	6410293	.	-	0	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_226.1;transcript_id=NA19239_ch_T0000202;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000202;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000202:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6410294	6410399	.	-	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_226.1;transcript_id=NA19239_ch_T0000202;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000202;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000202:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6410400	6410545	.	-	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_226.1;transcript_id=NA19239_ch_T0000202;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000202;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000202:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6410400	6410545	.	-	2	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_226.1;transcript_id=NA19239_ch_T0000202;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000202;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000202:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6410546	6410646	.	-	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_226.1;transcript_id=NA19239_ch_T0000202;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000202;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000202:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6410647	6410758	.	-	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_226.1;transcript_id=NA19239_ch_T0000202;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000202;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000202:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6410647	6410758	.	-	0	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_226.1;transcript_id=NA19239_ch_T0000202;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000202;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000202:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6410759	6410886	.	-	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_226.1;transcript_id=NA19239_ch_T0000202;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000202;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000202:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6410887	6410964	.	-	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_226.1;transcript_id=NA19239_ch_T0000202;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000202;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000202:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6410887	6410964	.	-	0	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_226.1;transcript_id=NA19239_ch_T0000202;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000202;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000202:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6410965	6411571	.	-	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_226.1;transcript_id=NA19239_ch_T0000202;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000202;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000202:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6411572	6412103	.	-	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_226.1;transcript_id=NA19239_ch_T0000202;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000202;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000202:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6411572	6412057	.	-	0	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_226.1;transcript_id=NA19239_ch_T0000202;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000202;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000202:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6412055	6412057	.	-	0	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_226.1;transcript_id=NA19239_ch_T0000202;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000202;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=start_codon:NA19239_ch_T0000202;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6409307	6412103	100	-	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_226.2;transcript_id=NA19239_ch_T0000203;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_G0000066;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=NA19239_ch_T0000203;Name=TSPY10
NA19239_chrY	CAT	exon	6409307	6409517	.	-	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_226.2;transcript_id=NA19239_ch_T0000203;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000203;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000203:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6409518	6410211	.	-	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_226.2;transcript_id=NA19239_ch_T0000203;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000203;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000203:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6410212	6410304	.	-	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_226.2;transcript_id=NA19239_ch_T0000203;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000203;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000203:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6410242	6410304	.	-	0	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_226.2;transcript_id=NA19239_ch_T0000203;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000203;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000203:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6410242	6410244	.	-	0	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_226.2;transcript_id=NA19239_ch_T0000203;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000203;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=stop_codon:NA19239_ch_T0000203;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6410305	6410399	.	-	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_226.2;transcript_id=NA19239_ch_T0000203;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000203;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000203:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6410400	6410545	.	-	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_226.2;transcript_id=NA19239_ch_T0000203;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000203;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000203:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6410400	6410545	.	-	2	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_226.2;transcript_id=NA19239_ch_T0000203;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000203;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000203:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6410546	6410646	.	-	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_226.2;transcript_id=NA19239_ch_T0000203;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000203;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000203:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6410647	6410758	.	-	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_226.2;transcript_id=NA19239_ch_T0000203;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000203;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000203:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6410647	6410758	.	-	0	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_226.2;transcript_id=NA19239_ch_T0000203;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000203;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000203:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6410759	6410886	.	-	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_226.2;transcript_id=NA19239_ch_T0000203;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000203;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000203:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6410887	6410964	.	-	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_226.2;transcript_id=NA19239_ch_T0000203;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000203;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000203:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6410887	6410964	.	-	0	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_226.2;transcript_id=NA19239_ch_T0000203;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000203;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000203:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6410965	6411571	.	-	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_226.2;transcript_id=NA19239_ch_T0000203;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000203;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000203:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6411572	6412103	.	-	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_226.2;transcript_id=NA19239_ch_T0000203;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000203;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000203:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6411572	6412057	.	-	0	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_226.2;transcript_id=NA19239_ch_T0000203;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000203;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000203:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6412055	6412057	.	-	0	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_226.2;transcript_id=NA19239_ch_T0000203;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000203;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=start_codon:NA19239_ch_T0000203;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6409307	6412103	100	-	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_226.3;transcript_id=NA19239_ch_T0000204;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_G0000066;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=NA19239_ch_T0000204;Name=TSPY10
NA19239_chrY	CAT	exon	6409307	6409517	.	-	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_226.3;transcript_id=NA19239_ch_T0000204;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000204;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000204:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6409518	6410211	.	-	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_226.3;transcript_id=NA19239_ch_T0000204;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000204;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000204:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6410212	6410293	.	-	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_226.3;transcript_id=NA19239_ch_T0000204;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000204;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000204:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6410242	6410293	.	-	1	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_226.3;transcript_id=NA19239_ch_T0000204;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000204;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000204:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6410242	6410244	.	-	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_226.3;transcript_id=NA19239_ch_T0000204;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000204;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=stop_codon:NA19239_ch_T0000204;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6410294	6410399	.	-	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_226.3;transcript_id=NA19239_ch_T0000204;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000204;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000204:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6410400	6410538	.	-	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_226.3;transcript_id=NA19239_ch_T0000204;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000204;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000204:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6410400	6410538	.	-	2	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_226.3;transcript_id=NA19239_ch_T0000204;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000204;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000204:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6410539	6410646	.	-	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_226.3;transcript_id=NA19239_ch_T0000204;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000204;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000204:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6410647	6410758	.	-	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_226.3;transcript_id=NA19239_ch_T0000204;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000204;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000204:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6410647	6410758	.	-	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_226.3;transcript_id=NA19239_ch_T0000204;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000204;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000204:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6410759	6410886	.	-	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_226.3;transcript_id=NA19239_ch_T0000204;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000204;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000204:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6410887	6410964	.	-	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_226.3;transcript_id=NA19239_ch_T0000204;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000204;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000204:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6410887	6410964	.	-	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_226.3;transcript_id=NA19239_ch_T0000204;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000204;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000204:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6410965	6411571	.	-	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_226.3;transcript_id=NA19239_ch_T0000204;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000204;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000204:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6411572	6412103	.	-	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_226.3;transcript_id=NA19239_ch_T0000204;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000204;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000204:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6411572	6412057	.	-	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_226.3;transcript_id=NA19239_ch_T0000204;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000204;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000204:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6412055	6412057	.	-	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_226.3;transcript_id=NA19239_ch_T0000204;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000204;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=start_codon:NA19239_ch_T0000204;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6409307	6412103	1000	-	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_226.4;transcript_id=NA19239_ch_T0000205;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_G0000066;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=NA19239_ch_T0000205;Name=TSPY10
NA19239_chrY	CAT	exon	6409307	6409517	.	-	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_226.4;transcript_id=NA19239_ch_T0000205;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000205;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000205:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6409518	6410211	.	-	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_226.4;transcript_id=NA19239_ch_T0000205;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000205;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000205:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6410212	6410304	.	-	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_226.4;transcript_id=NA19239_ch_T0000205;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000205;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000205:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6410305	6410399	.	-	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_226.4;transcript_id=NA19239_ch_T0000205;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000205;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000205:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6410400	6410538	.	-	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_226.4;transcript_id=NA19239_ch_T0000205;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000205;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000205:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6410539	6410646	.	-	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_226.4;transcript_id=NA19239_ch_T0000205;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000205;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000205:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6410647	6410758	.	-	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_226.4;transcript_id=NA19239_ch_T0000205;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000205;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000205:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6410759	6410886	.	-	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_226.4;transcript_id=NA19239_ch_T0000205;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000205;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000205:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6410887	6410964	.	-	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_226.4;transcript_id=NA19239_ch_T0000205;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000205;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000205:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6410965	6411571	.	-	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_226.4;transcript_id=NA19239_ch_T0000205;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000205;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000205:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6411572	6412103	.	-	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_226.4;transcript_id=NA19239_ch_T0000205;gene_id=NA19239_ch_G0000066;Parent=NA19239_ch_T0000205;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000205:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6429585	6432399	.	-	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_198;gene_id=NA19239_ch_G0000067;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=augTM,transMap;ID=NA19239_ch_G0000067;Name=TSPY1
NA19239_chrY	CAT	transcript	6429585	6432399	1000	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.889;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000206;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_G0000067;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=NA19239_ch_T0000206;Name=TSPY1
NA19239_chrY	CAT	exon	6429585	6429795	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000206;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000206:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6429773	6429795	.	-	2	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000206;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000206:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6429773	6429775	.	-	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000206;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=stop_codon:NA19239_ch_T0000206;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6429796	6430489	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000206;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000206:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6430490	6430571	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000206;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000206:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6430490	6430571	.	-	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000206;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000206:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6430572	6430677	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000206;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000206:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6430678	6430823	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000206;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000206:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6430678	6430823	.	-	2	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000206;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000206:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6430824	6430924	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000206;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000206:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6430925	6431036	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000206;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000206:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6430925	6431036	.	-	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000206;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000206:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6431037	6431164	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000206;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000206:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6431165	6431242	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000206;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000206:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6431165	6431242	.	-	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000206;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000206:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6431243	6431849	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000206;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000206:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6431850	6431987	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000206;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000206:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6431850	6431987	.	-	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000206;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000206:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6431988	6432266	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000206;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000206:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6432267	6432399	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000206;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000206:6;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6432267	6432353	.	-	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000206;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000206:6;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6432351	6432353	.	-	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000206;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=start_codon:NA19239_ch_T0000206;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6429585	6432399	1000	-	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=299.827;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000207;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_G0000067;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=NA19239_ch_T0000207;Name=TSPY1
NA19239_chrY	CAT	exon	6429585	6429795	.	-	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000207;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000207;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000207:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6429796	6430489	.	-	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000207;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000207;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000207:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6430490	6430571	.	-	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000207;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000207;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000207:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6430520	6430571	.	-	1	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000207;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000207;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000207:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6430520	6430522	.	-	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000207;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000207;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=stop_codon:NA19239_ch_T0000207;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6430572	6430677	.	-	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000207;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000207;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000207:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6430678	6430816	.	-	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000207;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000207;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000207:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6430678	6430816	.	-	2	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000207;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000207;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000207:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6430817	6430924	.	-	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000207;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000207;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000207:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6430925	6431036	.	-	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000207;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000207;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000207:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6430925	6431036	.	-	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000207;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000207;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000207:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6431037	6431164	.	-	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000207;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000207;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000207:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6431165	6431242	.	-	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000207;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000207;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000207:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6431165	6431242	.	-	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000207;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000207;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000207:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6431243	6431849	.	-	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000207;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000207;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000207:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6431850	6432399	.	-	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000207;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000207;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000207:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6431850	6432353	.	-	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000207;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000207;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000207:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6432351	6432353	.	-	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000207;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000207;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=start_codon:NA19239_ch_T0000207;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6429585	6432399	1000	-	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=299.828;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000208;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_G0000067;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=NA19239_ch_T0000208;Name=TSPY1
NA19239_chrY	CAT	exon	6429585	6429795	.	-	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000208;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000208;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000208:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6429796	6430489	.	-	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000208;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000208;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000208:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6430490	6430582	.	-	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000208;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000208;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000208:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6430583	6430677	.	-	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000208;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000208;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000208:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6430678	6430816	.	-	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000208;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000208;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000208:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6430817	6430924	.	-	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000208;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000208;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000208:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6430925	6431036	.	-	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000208;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000208;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000208:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6431037	6431164	.	-	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000208;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000208;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000208:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6431165	6431242	.	-	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000208;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000208;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000208:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6431243	6431849	.	-	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000208;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000208;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000208:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6431850	6432399	.	-	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000208;gene_id=NA19239_ch_G0000067;Parent=NA19239_ch_T0000208;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000208:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6434923	6440600	.	+	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_215;gene_id=NA19239_ch_G0000068;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=NA19239_ch_G0000068;Name=FAM197Y2
NA19239_chrY	CAT	transcript	6434923	6440600	1000	+	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA19239_ch_T0000209;gene_id=NA19239_ch_G0000068;Parent=NA19239_ch_G0000068;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=NA19239_ch_T0000209;Name=FAM197Y2
NA19239_chrY	CAT	exon	6434923	6435113	.	+	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA19239_ch_T0000209;gene_id=NA19239_ch_G0000068;Parent=NA19239_ch_T0000209;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000209:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6435114	6435199	.	+	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA19239_ch_T0000209;gene_id=NA19239_ch_G0000068;Parent=NA19239_ch_T0000209;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000209:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6435200	6435345	.	+	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA19239_ch_T0000209;gene_id=NA19239_ch_G0000068;Parent=NA19239_ch_T0000209;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000209:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6435346	6436832	.	+	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA19239_ch_T0000209;gene_id=NA19239_ch_G0000068;Parent=NA19239_ch_T0000209;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000209:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6436833	6436991	.	+	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA19239_ch_T0000209;gene_id=NA19239_ch_G0000068;Parent=NA19239_ch_T0000209;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000209:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6436992	6440540	.	+	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA19239_ch_T0000209;gene_id=NA19239_ch_G0000068;Parent=NA19239_ch_T0000209;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000209:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6440541	6440600	.	+	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA19239_ch_T0000209;gene_id=NA19239_ch_G0000068;Parent=NA19239_ch_T0000209;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000209:3;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6449887	6452701	.	-	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_196;gene_id=NA19239_ch_G0000069;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=augTM,transMap;ID=NA19239_ch_G0000069;Name=TSPY1
NA19239_chrY	CAT	transcript	6449887	6452701	9960	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.55;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000210;gene_id=NA19239_ch_G0000069;Parent=NA19239_ch_G0000069;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=NA19239_ch_T0000210;Name=TSPY1
NA19239_chrY	CAT	exon	6449887	6450097	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.55;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000210;gene_id=NA19239_ch_G0000069;Parent=NA19239_ch_T0000210;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000210:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6450075	6450097	.	-	2	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.55;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000210;gene_id=NA19239_ch_G0000069;Parent=NA19239_ch_T0000210;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000210:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6450075	6450077	.	-	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.55;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000210;gene_id=NA19239_ch_G0000069;Parent=NA19239_ch_T0000210;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=stop_codon:NA19239_ch_T0000210;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6450098	6450791	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.55;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000210;gene_id=NA19239_ch_G0000069;Parent=NA19239_ch_T0000210;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000210:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6450792	6450873	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.55;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000210;gene_id=NA19239_ch_G0000069;Parent=NA19239_ch_T0000210;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000210:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6450792	6450873	.	-	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.55;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000210;gene_id=NA19239_ch_G0000069;Parent=NA19239_ch_T0000210;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000210:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6450874	6450979	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.55;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000210;gene_id=NA19239_ch_G0000069;Parent=NA19239_ch_T0000210;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000210:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6450980	6451125	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.55;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000210;gene_id=NA19239_ch_G0000069;Parent=NA19239_ch_T0000210;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000210:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6450980	6451125	.	-	2	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.55;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000210;gene_id=NA19239_ch_G0000069;Parent=NA19239_ch_T0000210;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000210:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6451126	6451226	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.55;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000210;gene_id=NA19239_ch_G0000069;Parent=NA19239_ch_T0000210;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000210:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6451227	6451338	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.55;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000210;gene_id=NA19239_ch_G0000069;Parent=NA19239_ch_T0000210;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000210:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6451227	6451338	.	-	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.55;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000210;gene_id=NA19239_ch_G0000069;Parent=NA19239_ch_T0000210;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000210:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6451339	6451466	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.55;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000210;gene_id=NA19239_ch_G0000069;Parent=NA19239_ch_T0000210;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000210:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6451467	6451544	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.55;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000210;gene_id=NA19239_ch_G0000069;Parent=NA19239_ch_T0000210;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000210:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6451467	6451544	.	-	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.55;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000210;gene_id=NA19239_ch_G0000069;Parent=NA19239_ch_T0000210;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000210:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6451545	6452151	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.55;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000210;gene_id=NA19239_ch_G0000069;Parent=NA19239_ch_T0000210;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000210:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6452152	6452289	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.55;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000210;gene_id=NA19239_ch_G0000069;Parent=NA19239_ch_T0000210;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000210:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6452152	6452289	.	-	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.55;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000210;gene_id=NA19239_ch_G0000069;Parent=NA19239_ch_T0000210;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000210:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6452290	6452568	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.55;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000210;gene_id=NA19239_ch_G0000069;Parent=NA19239_ch_T0000210;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000210:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6452569	6452701	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.55;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000210;gene_id=NA19239_ch_G0000069;Parent=NA19239_ch_T0000210;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000210:6;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6452569	6452655	.	-	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.55;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000210;gene_id=NA19239_ch_G0000069;Parent=NA19239_ch_T0000210;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000210:6;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6452653	6452655	.	-	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.55;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000210;gene_id=NA19239_ch_G0000069;Parent=NA19239_ch_T0000210;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=start_codon:NA19239_ch_T0000210;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6455314	6460911	.	+	.	source_gene_common_name=FAM197Y4;source_gene=hg002_chrY_paternal_223;gene_id=NA19239_ch_G0000070;gene_biotype=lncRNA;gene_name=FAM197Y4;gene_sources=liftoff;ID=NA19239_ch_G0000070;Name=FAM197Y4
NA19239_chrY	CAT	transcript	6455314	6460911	1000	+	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=NA19239_ch_T0000211;gene_id=NA19239_ch_G0000070;Parent=NA19239_ch_G0000070;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=NA19239_ch_T0000211;Name=FAM197Y4
NA19239_chrY	CAT	exon	6455314	6455415	.	+	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=NA19239_ch_T0000211;gene_id=NA19239_ch_G0000070;Parent=NA19239_ch_T0000211;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=exon:NA19239_ch_T0000211:0;Name=FAM197Y4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6455416	6455501	.	+	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=NA19239_ch_T0000211;gene_id=NA19239_ch_G0000070;Parent=NA19239_ch_T0000211;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=intron:NA19239_ch_T0000211:0;Name=FAM197Y4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6455502	6455647	.	+	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=NA19239_ch_T0000211;gene_id=NA19239_ch_G0000070;Parent=NA19239_ch_T0000211;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=exon:NA19239_ch_T0000211:1;Name=FAM197Y4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6455648	6457143	.	+	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=NA19239_ch_T0000211;gene_id=NA19239_ch_G0000070;Parent=NA19239_ch_T0000211;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=intron:NA19239_ch_T0000211:1;Name=FAM197Y4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6457144	6457302	.	+	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=NA19239_ch_T0000211;gene_id=NA19239_ch_G0000070;Parent=NA19239_ch_T0000211;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=exon:NA19239_ch_T0000211:2;Name=FAM197Y4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6457303	6460851	.	+	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=NA19239_ch_T0000211;gene_id=NA19239_ch_G0000070;Parent=NA19239_ch_T0000211;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=intron:NA19239_ch_T0000211:2;Name=FAM197Y4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6460852	6460911	.	+	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=NA19239_ch_T0000211;gene_id=NA19239_ch_G0000070;Parent=NA19239_ch_T0000211;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=exon:NA19239_ch_T0000211:3;Name=FAM197Y4;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6470200	6472996	.	-	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_158;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_220.3;gene_id=NA19239_ch_G0000071;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=NA19239_ch_G0000071;Name=TSPY1
NA19239_chrY	CAT	transcript	6470200	6472996	100	-	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_220.3;transcript_id=NA19239_ch_T0000212;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_G0000071;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=NA19239_ch_T0000212;Name=TSPY1
NA19239_chrY	CAT	exon	6470200	6470410	.	-	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_220.3;transcript_id=NA19239_ch_T0000212;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000212;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000212:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6470388	6470410	.	-	2	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_220.3;transcript_id=NA19239_ch_T0000212;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000212;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000212:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6470388	6470390	.	-	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_220.3;transcript_id=NA19239_ch_T0000212;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000212;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:NA19239_ch_T0000212;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6470411	6471104	.	-	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_220.3;transcript_id=NA19239_ch_T0000212;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000212;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000212:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6471105	6471186	.	-	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_220.3;transcript_id=NA19239_ch_T0000212;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000212;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000212:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6471105	6471186	.	-	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_220.3;transcript_id=NA19239_ch_T0000212;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000212;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000212:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6471187	6471292	.	-	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_220.3;transcript_id=NA19239_ch_T0000212;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000212;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000212:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6471293	6471438	.	-	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_220.3;transcript_id=NA19239_ch_T0000212;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000212;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000212:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6471293	6471438	.	-	2	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_220.3;transcript_id=NA19239_ch_T0000212;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000212;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000212:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6471439	6471539	.	-	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_220.3;transcript_id=NA19239_ch_T0000212;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000212;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000212:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6471540	6471651	.	-	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_220.3;transcript_id=NA19239_ch_T0000212;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000212;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000212:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6471540	6471651	.	-	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_220.3;transcript_id=NA19239_ch_T0000212;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000212;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000212:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6471652	6471779	.	-	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_220.3;transcript_id=NA19239_ch_T0000212;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000212;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000212:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6471780	6471857	.	-	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_220.3;transcript_id=NA19239_ch_T0000212;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000212;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000212:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6471780	6471857	.	-	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_220.3;transcript_id=NA19239_ch_T0000212;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000212;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000212:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6471858	6472464	.	-	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_220.3;transcript_id=NA19239_ch_T0000212;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000212;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000212:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6472465	6472996	.	-	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_220.3;transcript_id=NA19239_ch_T0000212;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000212;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000212:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6472465	6472950	.	-	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_220.3;transcript_id=NA19239_ch_T0000212;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000212;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000212:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6472948	6472950	.	-	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_220.3;transcript_id=NA19239_ch_T0000212;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000212;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:NA19239_ch_T0000212;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6470200	6472996	100	-	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_220.1;transcript_id=NA19239_ch_T0000213;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_G0000071;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=NA19239_ch_T0000213;Name=TSPY1
NA19239_chrY	CAT	exon	6470200	6470410	.	-	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_220.1;transcript_id=NA19239_ch_T0000213;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000213;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000213:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6470411	6471104	.	-	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_220.1;transcript_id=NA19239_ch_T0000213;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000213;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000213:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6471105	6471197	.	-	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_220.1;transcript_id=NA19239_ch_T0000213;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000213;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000213:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6471135	6471197	.	-	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_220.1;transcript_id=NA19239_ch_T0000213;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000213;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000213:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6471135	6471137	.	-	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_220.1;transcript_id=NA19239_ch_T0000213;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000213;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:NA19239_ch_T0000213;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6471198	6471292	.	-	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_220.1;transcript_id=NA19239_ch_T0000213;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000213;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000213:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6471293	6471438	.	-	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_220.1;transcript_id=NA19239_ch_T0000213;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000213;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000213:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6471293	6471438	.	-	2	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_220.1;transcript_id=NA19239_ch_T0000213;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000213;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000213:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6471439	6471539	.	-	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_220.1;transcript_id=NA19239_ch_T0000213;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000213;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000213:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6471540	6471651	.	-	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_220.1;transcript_id=NA19239_ch_T0000213;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000213;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000213:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6471540	6471651	.	-	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_220.1;transcript_id=NA19239_ch_T0000213;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000213;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000213:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6471652	6471779	.	-	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_220.1;transcript_id=NA19239_ch_T0000213;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000213;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000213:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6471780	6471857	.	-	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_220.1;transcript_id=NA19239_ch_T0000213;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000213;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000213:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6471780	6471857	.	-	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_220.1;transcript_id=NA19239_ch_T0000213;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000213;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000213:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6471858	6472464	.	-	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_220.1;transcript_id=NA19239_ch_T0000213;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000213;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000213:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6472465	6472996	.	-	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_220.1;transcript_id=NA19239_ch_T0000213;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000213;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000213:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6472465	6472950	.	-	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_220.1;transcript_id=NA19239_ch_T0000213;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000213;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000213:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6472948	6472950	.	-	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_220.1;transcript_id=NA19239_ch_T0000213;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000213;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:NA19239_ch_T0000213;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6470200	6472996	100	-	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_220.4;transcript_id=NA19239_ch_T0000214;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_G0000071;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=NA19239_ch_T0000214;Name=TSPY1
NA19239_chrY	CAT	exon	6470200	6470410	.	-	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_220.4;transcript_id=NA19239_ch_T0000214;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000214;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000214:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6470411	6471104	.	-	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_220.4;transcript_id=NA19239_ch_T0000214;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000214;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000214:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6471105	6471186	.	-	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_220.4;transcript_id=NA19239_ch_T0000214;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000214;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000214:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6471135	6471186	.	-	1	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_220.4;transcript_id=NA19239_ch_T0000214;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000214;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000214:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6471135	6471137	.	-	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_220.4;transcript_id=NA19239_ch_T0000214;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000214;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:NA19239_ch_T0000214;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6471187	6471292	.	-	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_220.4;transcript_id=NA19239_ch_T0000214;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000214;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000214:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6471293	6471431	.	-	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_220.4;transcript_id=NA19239_ch_T0000214;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000214;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000214:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6471293	6471431	.	-	2	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_220.4;transcript_id=NA19239_ch_T0000214;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000214;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000214:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6471432	6471539	.	-	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_220.4;transcript_id=NA19239_ch_T0000214;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000214;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000214:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6471540	6471651	.	-	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_220.4;transcript_id=NA19239_ch_T0000214;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000214;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000214:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6471540	6471651	.	-	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_220.4;transcript_id=NA19239_ch_T0000214;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000214;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000214:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6471652	6471779	.	-	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_220.4;transcript_id=NA19239_ch_T0000214;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000214;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000214:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6471780	6471857	.	-	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_220.4;transcript_id=NA19239_ch_T0000214;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000214;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000214:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6471780	6471857	.	-	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_220.4;transcript_id=NA19239_ch_T0000214;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000214;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000214:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6471858	6472464	.	-	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_220.4;transcript_id=NA19239_ch_T0000214;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000214;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000214:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6472465	6472996	.	-	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_220.4;transcript_id=NA19239_ch_T0000214;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000214;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000214:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6472465	6472950	.	-	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_220.4;transcript_id=NA19239_ch_T0000214;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000214;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000214:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6472948	6472950	.	-	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_220.4;transcript_id=NA19239_ch_T0000214;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000214;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:NA19239_ch_T0000214;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6470200	6472996	100	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19239_ch_T0000215;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_G0000071;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=NA19239_ch_T0000215;Name=TSPY1
NA19239_chrY	CAT	exon	6470200	6470410	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19239_ch_T0000215;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000215;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000215:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6470388	6470410	.	-	2	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19239_ch_T0000215;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000215;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000215:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6470388	6470390	.	-	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19239_ch_T0000215;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000215;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:NA19239_ch_T0000215;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6470411	6471104	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19239_ch_T0000215;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000215;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000215:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6471105	6471186	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19239_ch_T0000215;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000215;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000215:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6471105	6471186	.	-	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19239_ch_T0000215;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000215;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000215:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6471187	6471292	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19239_ch_T0000215;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000215;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000215:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6471293	6471438	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19239_ch_T0000215;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000215;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000215:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6471293	6471438	.	-	2	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19239_ch_T0000215;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000215;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000215:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6471439	6471539	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19239_ch_T0000215;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000215;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000215:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6471540	6471651	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19239_ch_T0000215;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000215;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000215:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6471540	6471651	.	-	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19239_ch_T0000215;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000215;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000215:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6471652	6471779	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19239_ch_T0000215;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000215;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000215:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6471780	6471857	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19239_ch_T0000215;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000215;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000215:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6471780	6471857	.	-	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19239_ch_T0000215;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000215;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000215:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6471858	6472464	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19239_ch_T0000215;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000215;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000215:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6472465	6472602	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19239_ch_T0000215;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000215;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000215:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6472465	6472602	.	-	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19239_ch_T0000215;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000215;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000215:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6472603	6472863	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19239_ch_T0000215;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000215;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000215:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6472864	6472996	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19239_ch_T0000215;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000215;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000215:6;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6472864	6472950	.	-	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19239_ch_T0000215;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000215;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000215:6;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6472948	6472950	.	-	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19239_ch_T0000215;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000215;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:NA19239_ch_T0000215;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6470200	6472996	1000	-	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4,hg002_chrY_paternal_220.5;transcript_id=NA19239_ch_T0000216;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_G0000071;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=NA19239_ch_T0000216;Name=TSPY1
NA19239_chrY	CAT	exon	6470200	6470410	.	-	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4,hg002_chrY_paternal_220.5;transcript_id=NA19239_ch_T0000216;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000216;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:NA19239_ch_T0000216:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6470411	6471104	.	-	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4,hg002_chrY_paternal_220.5;transcript_id=NA19239_ch_T0000216;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000216;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:NA19239_ch_T0000216:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6471105	6471197	.	-	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4,hg002_chrY_paternal_220.5;transcript_id=NA19239_ch_T0000216;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000216;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:NA19239_ch_T0000216:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6471198	6471292	.	-	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4,hg002_chrY_paternal_220.5;transcript_id=NA19239_ch_T0000216;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000216;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:NA19239_ch_T0000216:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6471293	6471431	.	-	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4,hg002_chrY_paternal_220.5;transcript_id=NA19239_ch_T0000216;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000216;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:NA19239_ch_T0000216:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6471432	6471539	.	-	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4,hg002_chrY_paternal_220.5;transcript_id=NA19239_ch_T0000216;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000216;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:NA19239_ch_T0000216:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6471540	6471651	.	-	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4,hg002_chrY_paternal_220.5;transcript_id=NA19239_ch_T0000216;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000216;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:NA19239_ch_T0000216:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6471652	6471779	.	-	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4,hg002_chrY_paternal_220.5;transcript_id=NA19239_ch_T0000216;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000216;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:NA19239_ch_T0000216:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6471780	6471857	.	-	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4,hg002_chrY_paternal_220.5;transcript_id=NA19239_ch_T0000216;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000216;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:NA19239_ch_T0000216:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6471858	6472464	.	-	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4,hg002_chrY_paternal_220.5;transcript_id=NA19239_ch_T0000216;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000216;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:NA19239_ch_T0000216:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6472465	6472996	.	-	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4,hg002_chrY_paternal_220.5;transcript_id=NA19239_ch_T0000216;gene_id=NA19239_ch_G0000071;Parent=NA19239_ch_T0000216;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:NA19239_ch_T0000216:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6475521	6481209	.	+	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_159;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_219.1;gene_id=NA19239_ch_G0000072;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=NA19239_ch_G0000072;Name=FAM197Y2
NA19239_chrY	CAT	transcript	6475521	6481209	1000	+	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_219.1;transcript_id=NA19239_ch_T0000217;gene_id=NA19239_ch_G0000072;Parent=NA19239_ch_G0000072;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=NA19239_ch_T0000217;Name=FAM197Y2
NA19239_chrY	CAT	exon	6475521	6475711	.	+	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_219.1;transcript_id=NA19239_ch_T0000217;gene_id=NA19239_ch_G0000072;Parent=NA19239_ch_T0000217;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000217:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6475712	6475797	.	+	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_219.1;transcript_id=NA19239_ch_T0000217;gene_id=NA19239_ch_G0000072;Parent=NA19239_ch_T0000217;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000217:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6475798	6475943	.	+	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_219.1;transcript_id=NA19239_ch_T0000217;gene_id=NA19239_ch_G0000072;Parent=NA19239_ch_T0000217;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000217:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6475944	6477439	.	+	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_219.1;transcript_id=NA19239_ch_T0000217;gene_id=NA19239_ch_G0000072;Parent=NA19239_ch_T0000217;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000217:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6477440	6477598	.	+	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_219.1;transcript_id=NA19239_ch_T0000217;gene_id=NA19239_ch_G0000072;Parent=NA19239_ch_T0000217;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000217:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6477599	6481149	.	+	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_219.1;transcript_id=NA19239_ch_T0000217;gene_id=NA19239_ch_G0000072;Parent=NA19239_ch_T0000217;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000217:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6481150	6481209	.	+	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_219.1;transcript_id=NA19239_ch_T0000217;gene_id=NA19239_ch_G0000072;Parent=NA19239_ch_T0000217;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000217:3;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6490518	6493314	.	-	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_220;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_216.1;gene_id=NA19239_ch_G0000073;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=NA19239_ch_G0000073;Name=TSPY1
NA19239_chrY	CAT	transcript	6490518	6493314	100	-	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_216.1;transcript_id=NA19239_ch_T0000218;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_G0000073;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=NA19239_ch_T0000218;Name=TSPY1
NA19239_chrY	CAT	exon	6490518	6490728	.	-	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_216.1;transcript_id=NA19239_ch_T0000218;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000218;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000218:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6490706	6490728	.	-	2	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_216.1;transcript_id=NA19239_ch_T0000218;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000218;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000218:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6490706	6490708	.	-	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_216.1;transcript_id=NA19239_ch_T0000218;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000218;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=stop_codon:NA19239_ch_T0000218;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6490729	6491422	.	-	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_216.1;transcript_id=NA19239_ch_T0000218;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000218;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000218:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6491423	6491504	.	-	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_216.1;transcript_id=NA19239_ch_T0000218;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000218;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000218:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6491423	6491504	.	-	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_216.1;transcript_id=NA19239_ch_T0000218;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000218;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000218:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6491505	6491610	.	-	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_216.1;transcript_id=NA19239_ch_T0000218;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000218;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000218:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6491611	6491756	.	-	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_216.1;transcript_id=NA19239_ch_T0000218;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000218;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000218:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6491611	6491756	.	-	2	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_216.1;transcript_id=NA19239_ch_T0000218;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000218;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000218:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6491757	6491857	.	-	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_216.1;transcript_id=NA19239_ch_T0000218;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000218;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000218:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6491858	6491969	.	-	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_216.1;transcript_id=NA19239_ch_T0000218;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000218;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000218:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6491858	6491969	.	-	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_216.1;transcript_id=NA19239_ch_T0000218;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000218;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000218:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6491970	6492097	.	-	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_216.1;transcript_id=NA19239_ch_T0000218;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000218;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000218:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6492098	6492175	.	-	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_216.1;transcript_id=NA19239_ch_T0000218;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000218;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000218:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6492098	6492175	.	-	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_216.1;transcript_id=NA19239_ch_T0000218;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000218;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000218:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6492176	6492782	.	-	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_216.1;transcript_id=NA19239_ch_T0000218;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000218;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000218:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6492783	6493314	.	-	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_216.1;transcript_id=NA19239_ch_T0000218;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000218;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000218:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6492783	6493268	.	-	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_216.1;transcript_id=NA19239_ch_T0000218;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000218;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000218:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6493266	6493268	.	-	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_216.1;transcript_id=NA19239_ch_T0000218;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000218;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=start_codon:NA19239_ch_T0000218;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6490518	6493314	100	-	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_216.2;transcript_id=NA19239_ch_T0000219;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_G0000073;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=NA19239_ch_T0000219;Name=TSPY1
NA19239_chrY	CAT	exon	6490518	6490728	.	-	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_216.2;transcript_id=NA19239_ch_T0000219;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000219;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000219:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6490729	6491422	.	-	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_216.2;transcript_id=NA19239_ch_T0000219;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000219;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000219:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6491423	6491515	.	-	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_216.2;transcript_id=NA19239_ch_T0000219;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000219;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000219:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6491453	6491515	.	-	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_216.2;transcript_id=NA19239_ch_T0000219;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000219;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000219:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6491453	6491455	.	-	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_216.2;transcript_id=NA19239_ch_T0000219;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000219;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=stop_codon:NA19239_ch_T0000219;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6491516	6491610	.	-	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_216.2;transcript_id=NA19239_ch_T0000219;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000219;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000219:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6491611	6491756	.	-	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_216.2;transcript_id=NA19239_ch_T0000219;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000219;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000219:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6491611	6491756	.	-	2	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_216.2;transcript_id=NA19239_ch_T0000219;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000219;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000219:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6491757	6491857	.	-	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_216.2;transcript_id=NA19239_ch_T0000219;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000219;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000219:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6491858	6491969	.	-	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_216.2;transcript_id=NA19239_ch_T0000219;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000219;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000219:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6491858	6491969	.	-	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_216.2;transcript_id=NA19239_ch_T0000219;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000219;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000219:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6491970	6492097	.	-	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_216.2;transcript_id=NA19239_ch_T0000219;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000219;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000219:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6492098	6492175	.	-	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_216.2;transcript_id=NA19239_ch_T0000219;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000219;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000219:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6492098	6492175	.	-	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_216.2;transcript_id=NA19239_ch_T0000219;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000219;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000219:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6492176	6492782	.	-	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_216.2;transcript_id=NA19239_ch_T0000219;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000219;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000219:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6492783	6493314	.	-	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_216.2;transcript_id=NA19239_ch_T0000219;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000219;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000219:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6492783	6493268	.	-	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_216.2;transcript_id=NA19239_ch_T0000219;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000219;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000219:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6493266	6493268	.	-	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_216.2;transcript_id=NA19239_ch_T0000219;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000219;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=start_codon:NA19239_ch_T0000219;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6490518	6493314	100	-	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_216.3;transcript_id=NA19239_ch_T0000220;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_G0000073;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=NA19239_ch_T0000220;Name=TSPY1
NA19239_chrY	CAT	exon	6490518	6490728	.	-	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_216.3;transcript_id=NA19239_ch_T0000220;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000220;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000220:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6490729	6491422	.	-	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_216.3;transcript_id=NA19239_ch_T0000220;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000220;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000220:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6491423	6491504	.	-	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_216.3;transcript_id=NA19239_ch_T0000220;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000220;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000220:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6491453	6491504	.	-	1	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_216.3;transcript_id=NA19239_ch_T0000220;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000220;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000220:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6491453	6491455	.	-	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_216.3;transcript_id=NA19239_ch_T0000220;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000220;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=stop_codon:NA19239_ch_T0000220;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6491505	6491610	.	-	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_216.3;transcript_id=NA19239_ch_T0000220;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000220;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000220:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6491611	6491749	.	-	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_216.3;transcript_id=NA19239_ch_T0000220;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000220;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000220:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6491611	6491749	.	-	2	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_216.3;transcript_id=NA19239_ch_T0000220;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000220;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000220:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6491750	6491857	.	-	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_216.3;transcript_id=NA19239_ch_T0000220;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000220;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000220:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6491858	6491969	.	-	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_216.3;transcript_id=NA19239_ch_T0000220;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000220;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000220:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6491858	6491969	.	-	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_216.3;transcript_id=NA19239_ch_T0000220;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000220;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000220:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6491970	6492097	.	-	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_216.3;transcript_id=NA19239_ch_T0000220;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000220;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000220:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6492098	6492175	.	-	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_216.3;transcript_id=NA19239_ch_T0000220;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000220;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000220:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6492098	6492175	.	-	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_216.3;transcript_id=NA19239_ch_T0000220;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000220;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000220:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6492176	6492782	.	-	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_216.3;transcript_id=NA19239_ch_T0000220;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000220;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000220:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6492783	6493314	.	-	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_216.3;transcript_id=NA19239_ch_T0000220;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000220;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000220:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6492783	6493268	.	-	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_216.3;transcript_id=NA19239_ch_T0000220;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000220;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000220:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6493266	6493268	.	-	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_216.3;transcript_id=NA19239_ch_T0000220;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000220;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=start_codon:NA19239_ch_T0000220;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6490518	6493314	1000	-	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_216.4;transcript_id=NA19239_ch_T0000221;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_G0000073;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=NA19239_ch_T0000221;Name=TSPY1
NA19239_chrY	CAT	exon	6490518	6490728	.	-	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_216.4;transcript_id=NA19239_ch_T0000221;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000221;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:NA19239_ch_T0000221:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6490729	6491422	.	-	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_216.4;transcript_id=NA19239_ch_T0000221;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000221;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:NA19239_ch_T0000221:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6491423	6491515	.	-	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_216.4;transcript_id=NA19239_ch_T0000221;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000221;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:NA19239_ch_T0000221:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6491516	6491610	.	-	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_216.4;transcript_id=NA19239_ch_T0000221;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000221;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:NA19239_ch_T0000221:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6491611	6491749	.	-	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_216.4;transcript_id=NA19239_ch_T0000221;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000221;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:NA19239_ch_T0000221:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6491750	6491857	.	-	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_216.4;transcript_id=NA19239_ch_T0000221;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000221;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:NA19239_ch_T0000221:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6491858	6491969	.	-	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_216.4;transcript_id=NA19239_ch_T0000221;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000221;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:NA19239_ch_T0000221:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6491970	6492097	.	-	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_216.4;transcript_id=NA19239_ch_T0000221;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000221;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:NA19239_ch_T0000221:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6492098	6492175	.	-	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_216.4;transcript_id=NA19239_ch_T0000221;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000221;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:NA19239_ch_T0000221:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6492176	6492782	.	-	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_216.4;transcript_id=NA19239_ch_T0000221;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000221;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:NA19239_ch_T0000221:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6492783	6493314	.	-	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_216.4;transcript_id=NA19239_ch_T0000221;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000221;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:NA19239_ch_T0000221:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6490518	6493314	100	-	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000222;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_G0000073;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=NA19239_ch_T0000222;Name=TSPY1
NA19239_chrY	CAT	exon	6490518	6490728	.	-	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000222;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000222;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000222:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6490706	6490728	.	-	2	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000222;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000222;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000222:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6490706	6490708	.	-	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000222;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000222;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=stop_codon:NA19239_ch_T0000222;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6490729	6491422	.	-	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000222;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000222;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000222:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6491423	6491504	.	-	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000222;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000222;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000222:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6491423	6491504	.	-	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000222;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000222;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000222:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6491505	6491610	.	-	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000222;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000222;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000222:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6491611	6491756	.	-	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000222;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000222;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000222:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6491611	6491756	.	-	2	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000222;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000222;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000222:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6491757	6491857	.	-	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000222;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000222;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000222:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6491858	6491969	.	-	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000222;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000222;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000222:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6491858	6491969	.	-	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000222;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000222;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000222:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6491970	6492097	.	-	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000222;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000222;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000222:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6492098	6492175	.	-	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000222;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000222;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000222:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6492098	6492175	.	-	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000222;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000222;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000222:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6492176	6492782	.	-	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000222;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000222;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000222:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6492783	6492920	.	-	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000222;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000222;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000222:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6492783	6492920	.	-	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000222;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000222;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000222:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6492921	6493181	.	-	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000222;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000222;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000222:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6493182	6493314	.	-	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000222;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000222;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000222:6;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6493182	6493268	.	-	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000222;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000222;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000222:6;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6493266	6493268	.	-	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000222;gene_id=NA19239_ch_G0000073;Parent=NA19239_ch_T0000222;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=start_codon:NA19239_ch_T0000222;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6495839	6501527	.	+	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_221;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_215.1;gene_id=NA19239_ch_G0000074;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=NA19239_ch_G0000074;Name=FAM197Y2
NA19239_chrY	CAT	transcript	6495839	6501527	1000	+	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_215.1;transcript_id=NA19239_ch_T0000223;gene_id=NA19239_ch_G0000074;Parent=NA19239_ch_G0000074;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=NA19239_ch_T0000223;Name=FAM197Y2
NA19239_chrY	CAT	exon	6495839	6496029	.	+	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_215.1;transcript_id=NA19239_ch_T0000223;gene_id=NA19239_ch_G0000074;Parent=NA19239_ch_T0000223;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000223:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6496030	6496115	.	+	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_215.1;transcript_id=NA19239_ch_T0000223;gene_id=NA19239_ch_G0000074;Parent=NA19239_ch_T0000223;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000223:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6496116	6496261	.	+	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_215.1;transcript_id=NA19239_ch_T0000223;gene_id=NA19239_ch_G0000074;Parent=NA19239_ch_T0000223;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000223:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6496262	6497757	.	+	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_215.1;transcript_id=NA19239_ch_T0000223;gene_id=NA19239_ch_G0000074;Parent=NA19239_ch_T0000223;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000223:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6497758	6497916	.	+	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_215.1;transcript_id=NA19239_ch_T0000223;gene_id=NA19239_ch_G0000074;Parent=NA19239_ch_T0000223;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000223:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6497917	6501467	.	+	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_215.1;transcript_id=NA19239_ch_T0000223;gene_id=NA19239_ch_G0000074;Parent=NA19239_ch_T0000223;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000223:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6501468	6501527	.	+	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_215.1;transcript_id=NA19239_ch_T0000223;gene_id=NA19239_ch_G0000074;Parent=NA19239_ch_T0000223;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000223:3;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6510827	6513624	.	-	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_218;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;gene_id=NA19239_ch_G0000075;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=NA19239_ch_G0000075;Name=TSPY10
NA19239_chrY	CAT	transcript	6510827	6513624	10000	-	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=NA19239_ch_T0000224;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_G0000075;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=NA19239_ch_T0000224;Name=TSPY10
NA19239_chrY	CAT	exon	6510827	6511038	.	-	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=NA19239_ch_T0000224;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000224;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000224:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6511016	6511038	.	-	2	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=NA19239_ch_T0000224;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000224;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000224:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6511016	6511018	.	-	0	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=NA19239_ch_T0000224;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000224;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=stop_codon:NA19239_ch_T0000224;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6511039	6511732	.	-	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=NA19239_ch_T0000224;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000224;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000224:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6511733	6511814	.	-	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=NA19239_ch_T0000224;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000224;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000224:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6511733	6511814	.	-	0	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=NA19239_ch_T0000224;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000224;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000224:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6511815	6511920	.	-	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=NA19239_ch_T0000224;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000224;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000224:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6511921	6512066	.	-	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=NA19239_ch_T0000224;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000224;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000224:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6511921	6512066	.	-	2	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=NA19239_ch_T0000224;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000224;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000224:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6512067	6512167	.	-	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=NA19239_ch_T0000224;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000224;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000224:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6512168	6512279	.	-	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=NA19239_ch_T0000224;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000224;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000224:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6512168	6512279	.	-	0	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=NA19239_ch_T0000224;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000224;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000224:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6512280	6512407	.	-	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=NA19239_ch_T0000224;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000224;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000224:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6512408	6512485	.	-	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=NA19239_ch_T0000224;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000224;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000224:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6512408	6512485	.	-	0	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=NA19239_ch_T0000224;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000224;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000224:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6512486	6513092	.	-	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=NA19239_ch_T0000224;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000224;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000224:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6513093	6513624	.	-	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=NA19239_ch_T0000224;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000224;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000224:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6513093	6513578	.	-	0	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=NA19239_ch_T0000224;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000224;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000224:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6513576	6513578	.	-	0	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=NA19239_ch_T0000224;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000224;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=start_codon:NA19239_ch_T0000224;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6510827	6513624	10000	-	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=NA19239_ch_T0000225;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_G0000075;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=NA19239_ch_T0000225;Name=TSPY10
NA19239_chrY	CAT	exon	6510827	6511038	.	-	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=NA19239_ch_T0000225;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000225;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000225:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6511039	6511732	.	-	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=NA19239_ch_T0000225;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000225;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000225:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6511733	6511825	.	-	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=NA19239_ch_T0000225;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000225;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000225:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6511763	6511825	.	-	0	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=NA19239_ch_T0000225;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000225;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000225:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6511763	6511765	.	-	0	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=NA19239_ch_T0000225;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000225;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=stop_codon:NA19239_ch_T0000225;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6511826	6511920	.	-	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=NA19239_ch_T0000225;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000225;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000225:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6511921	6512066	.	-	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=NA19239_ch_T0000225;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000225;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000225:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6511921	6512066	.	-	2	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=NA19239_ch_T0000225;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000225;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000225:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6512067	6512167	.	-	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=NA19239_ch_T0000225;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000225;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000225:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6512168	6512279	.	-	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=NA19239_ch_T0000225;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000225;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000225:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6512168	6512279	.	-	0	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=NA19239_ch_T0000225;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000225;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000225:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6512280	6512407	.	-	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=NA19239_ch_T0000225;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000225;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000225:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6512408	6512485	.	-	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=NA19239_ch_T0000225;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000225;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000225:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6512408	6512485	.	-	0	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=NA19239_ch_T0000225;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000225;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000225:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6512486	6513092	.	-	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=NA19239_ch_T0000225;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000225;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000225:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6513093	6513624	.	-	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=NA19239_ch_T0000225;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000225;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000225:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6513093	6513578	.	-	0	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=NA19239_ch_T0000225;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000225;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000225:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6513576	6513578	.	-	0	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=NA19239_ch_T0000225;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000225;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=start_codon:NA19239_ch_T0000225;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6510827	6513624	10000	-	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=NA19239_ch_T0000226;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_G0000075;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=NA19239_ch_T0000226;Name=TSPY10
NA19239_chrY	CAT	exon	6510827	6511038	.	-	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=NA19239_ch_T0000226;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000226;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000226:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6511039	6511732	.	-	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=NA19239_ch_T0000226;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000226;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000226:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6511733	6511814	.	-	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=NA19239_ch_T0000226;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000226;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000226:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6511763	6511814	.	-	1	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=NA19239_ch_T0000226;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000226;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000226:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6511763	6511765	.	-	0	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=NA19239_ch_T0000226;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000226;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=stop_codon:NA19239_ch_T0000226;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6511815	6511920	.	-	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=NA19239_ch_T0000226;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000226;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000226:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6511921	6512059	.	-	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=NA19239_ch_T0000226;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000226;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000226:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6511921	6512059	.	-	2	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=NA19239_ch_T0000226;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000226;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000226:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6512060	6512167	.	-	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=NA19239_ch_T0000226;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000226;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000226:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6512168	6512279	.	-	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=NA19239_ch_T0000226;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000226;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000226:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6512168	6512279	.	-	0	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=NA19239_ch_T0000226;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000226;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000226:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6512280	6512407	.	-	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=NA19239_ch_T0000226;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000226;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000226:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6512408	6512485	.	-	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=NA19239_ch_T0000226;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000226;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000226:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6512408	6512485	.	-	0	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=NA19239_ch_T0000226;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000226;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000226:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6512486	6513092	.	-	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=NA19239_ch_T0000226;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000226;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000226:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6513093	6513624	.	-	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=NA19239_ch_T0000226;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000226;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000226:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6513093	6513578	.	-	0	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=NA19239_ch_T0000226;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000226;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000226:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6513576	6513578	.	-	0	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=NA19239_ch_T0000226;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000226;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=start_codon:NA19239_ch_T0000226;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6510827	6513624	1000	-	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=NA19239_ch_T0000227;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_G0000075;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=NA19239_ch_T0000227;Name=TSPY10
NA19239_chrY	CAT	exon	6510827	6511038	.	-	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=NA19239_ch_T0000227;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000227;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000227:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6511039	6511732	.	-	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=NA19239_ch_T0000227;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000227;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000227:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6511733	6511825	.	-	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=NA19239_ch_T0000227;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000227;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000227:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6511826	6511920	.	-	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=NA19239_ch_T0000227;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000227;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000227:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6511921	6512059	.	-	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=NA19239_ch_T0000227;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000227;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000227:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6512060	6512167	.	-	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=NA19239_ch_T0000227;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000227;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000227:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6512168	6512279	.	-	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=NA19239_ch_T0000227;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000227;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000227:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6512280	6512407	.	-	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=NA19239_ch_T0000227;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000227;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000227:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6512408	6512485	.	-	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=NA19239_ch_T0000227;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000227;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000227:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6512486	6513092	.	-	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=NA19239_ch_T0000227;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000227;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000227:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6513093	6513624	.	-	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=NA19239_ch_T0000227;gene_id=NA19239_ch_G0000075;Parent=NA19239_ch_T0000227;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000227:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6516148	6521850	.	+	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_235;gene_id=NA19239_ch_G0000076;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=NA19239_ch_G0000076;Name=FAM197Y2
NA19239_chrY	CAT	transcript	6516148	6521850	1000	+	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA19239_ch_T0000228;gene_id=NA19239_ch_G0000076;Parent=NA19239_ch_G0000076;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=NA19239_ch_T0000228;Name=FAM197Y2
NA19239_chrY	CAT	exon	6516148	6516338	.	+	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA19239_ch_T0000228;gene_id=NA19239_ch_G0000076;Parent=NA19239_ch_T0000228;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000228:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6516339	6516424	.	+	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA19239_ch_T0000228;gene_id=NA19239_ch_G0000076;Parent=NA19239_ch_T0000228;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000228:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6516425	6516570	.	+	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA19239_ch_T0000228;gene_id=NA19239_ch_G0000076;Parent=NA19239_ch_T0000228;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000228:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6516571	6518078	.	+	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA19239_ch_T0000228;gene_id=NA19239_ch_G0000076;Parent=NA19239_ch_T0000228;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000228:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6518079	6518237	.	+	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA19239_ch_T0000228;gene_id=NA19239_ch_G0000076;Parent=NA19239_ch_T0000228;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000228:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6518238	6521790	.	+	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA19239_ch_T0000228;gene_id=NA19239_ch_G0000076;Parent=NA19239_ch_T0000228;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000228:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6521791	6521850	.	+	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA19239_ch_T0000228;gene_id=NA19239_ch_G0000076;Parent=NA19239_ch_T0000228;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000228:3;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6536529	6542132	.	+	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_211;alternative_source_transcripts=hg002_chrY_paternal_187.1,hg002_chrY_paternal_187.1;gene_id=NA19239_ch_G0000077;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=NA19239_ch_G0000077;Name=FAM197Y3
NA19239_chrY	CAT	transcript	6536529	6542132	1000	+	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_187.1,hg002_chrY_paternal_187.1;transcript_id=NA19239_ch_T0000229;gene_id=NA19239_ch_G0000077;Parent=NA19239_ch_G0000077;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=NA19239_ch_T0000229;Name=FAM197Y3
NA19239_chrY	CAT	exon	6536529	6536630	.	+	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_187.1,hg002_chrY_paternal_187.1;transcript_id=NA19239_ch_T0000229;gene_id=NA19239_ch_G0000077;Parent=NA19239_ch_T0000229;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=exon:NA19239_ch_T0000229:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6536631	6536716	.	+	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_187.1,hg002_chrY_paternal_187.1;transcript_id=NA19239_ch_T0000229;gene_id=NA19239_ch_G0000077;Parent=NA19239_ch_T0000229;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=intron:NA19239_ch_T0000229:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6536717	6536862	.	+	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_187.1,hg002_chrY_paternal_187.1;transcript_id=NA19239_ch_T0000229;gene_id=NA19239_ch_G0000077;Parent=NA19239_ch_T0000229;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=exon:NA19239_ch_T0000229:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6536863	6538362	.	+	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_187.1,hg002_chrY_paternal_187.1;transcript_id=NA19239_ch_T0000229;gene_id=NA19239_ch_G0000077;Parent=NA19239_ch_T0000229;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=intron:NA19239_ch_T0000229:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6538363	6538521	.	+	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_187.1,hg002_chrY_paternal_187.1;transcript_id=NA19239_ch_T0000229;gene_id=NA19239_ch_G0000077;Parent=NA19239_ch_T0000229;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=exon:NA19239_ch_T0000229:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6538522	6542072	.	+	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_187.1,hg002_chrY_paternal_187.1;transcript_id=NA19239_ch_T0000229;gene_id=NA19239_ch_G0000077;Parent=NA19239_ch_T0000229;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=intron:NA19239_ch_T0000229:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6542073	6542132	.	+	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_187.1,hg002_chrY_paternal_187.1;transcript_id=NA19239_ch_T0000229;gene_id=NA19239_ch_G0000077;Parent=NA19239_ch_T0000229;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=exon:NA19239_ch_T0000229:3;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6551403	6554199	.	-	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_212;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_178.1;gene_id=NA19239_ch_G0000078;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=NA19239_ch_G0000078;Name=TSPY10
NA19239_chrY	CAT	transcript	6551403	6554199	10000	-	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_178.1;transcript_id=NA19239_ch_T0000230;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_G0000078;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=NA19239_ch_T0000230;Name=TSPY10
NA19239_chrY	CAT	exon	6551403	6551613	.	-	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_178.1;transcript_id=NA19239_ch_T0000230;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000230;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000230:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6551591	6551613	.	-	2	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_178.1;transcript_id=NA19239_ch_T0000230;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000230;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000230:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6551591	6551593	.	-	0	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_178.1;transcript_id=NA19239_ch_T0000230;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000230;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=stop_codon:NA19239_ch_T0000230;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6551614	6552307	.	-	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_178.1;transcript_id=NA19239_ch_T0000230;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000230;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000230:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6552308	6552389	.	-	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_178.1;transcript_id=NA19239_ch_T0000230;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000230;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000230:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6552308	6552389	.	-	0	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_178.1;transcript_id=NA19239_ch_T0000230;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000230;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000230:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6552390	6552495	.	-	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_178.1;transcript_id=NA19239_ch_T0000230;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000230;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000230:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6552496	6552641	.	-	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_178.1;transcript_id=NA19239_ch_T0000230;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000230;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000230:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6552496	6552641	.	-	2	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_178.1;transcript_id=NA19239_ch_T0000230;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000230;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000230:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6552642	6552742	.	-	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_178.1;transcript_id=NA19239_ch_T0000230;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000230;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000230:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6552743	6552854	.	-	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_178.1;transcript_id=NA19239_ch_T0000230;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000230;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000230:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6552743	6552854	.	-	0	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_178.1;transcript_id=NA19239_ch_T0000230;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000230;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000230:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6552855	6552982	.	-	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_178.1;transcript_id=NA19239_ch_T0000230;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000230;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000230:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6552983	6553060	.	-	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_178.1;transcript_id=NA19239_ch_T0000230;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000230;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000230:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6552983	6553060	.	-	0	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_178.1;transcript_id=NA19239_ch_T0000230;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000230;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000230:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6553061	6553667	.	-	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_178.1;transcript_id=NA19239_ch_T0000230;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000230;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000230:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6553668	6554199	.	-	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_178.1;transcript_id=NA19239_ch_T0000230;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000230;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000230:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6553668	6554153	.	-	0	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_178.1;transcript_id=NA19239_ch_T0000230;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000230;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000230:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6554151	6554153	.	-	0	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_178.1;transcript_id=NA19239_ch_T0000230;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000230;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=start_codon:NA19239_ch_T0000230;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6551403	6554199	10000	-	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_178.2;transcript_id=NA19239_ch_T0000231;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_G0000078;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=NA19239_ch_T0000231;Name=TSPY10
NA19239_chrY	CAT	exon	6551403	6551613	.	-	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_178.2;transcript_id=NA19239_ch_T0000231;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000231;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000231:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6551614	6552307	.	-	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_178.2;transcript_id=NA19239_ch_T0000231;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000231;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000231:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6552308	6552400	.	-	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_178.2;transcript_id=NA19239_ch_T0000231;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000231;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000231:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6552338	6552400	.	-	0	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_178.2;transcript_id=NA19239_ch_T0000231;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000231;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000231:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6552338	6552340	.	-	0	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_178.2;transcript_id=NA19239_ch_T0000231;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000231;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=stop_codon:NA19239_ch_T0000231;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6552401	6552495	.	-	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_178.2;transcript_id=NA19239_ch_T0000231;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000231;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000231:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6552496	6552641	.	-	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_178.2;transcript_id=NA19239_ch_T0000231;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000231;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000231:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6552496	6552641	.	-	2	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_178.2;transcript_id=NA19239_ch_T0000231;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000231;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000231:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6552642	6552742	.	-	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_178.2;transcript_id=NA19239_ch_T0000231;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000231;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000231:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6552743	6552854	.	-	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_178.2;transcript_id=NA19239_ch_T0000231;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000231;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000231:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6552743	6552854	.	-	0	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_178.2;transcript_id=NA19239_ch_T0000231;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000231;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000231:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6552855	6552982	.	-	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_178.2;transcript_id=NA19239_ch_T0000231;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000231;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000231:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6552983	6553060	.	-	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_178.2;transcript_id=NA19239_ch_T0000231;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000231;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000231:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6552983	6553060	.	-	0	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_178.2;transcript_id=NA19239_ch_T0000231;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000231;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000231:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6553061	6553667	.	-	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_178.2;transcript_id=NA19239_ch_T0000231;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000231;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000231:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6553668	6554199	.	-	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_178.2;transcript_id=NA19239_ch_T0000231;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000231;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000231:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6553668	6554153	.	-	0	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_178.2;transcript_id=NA19239_ch_T0000231;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000231;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000231:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6554151	6554153	.	-	0	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_178.2;transcript_id=NA19239_ch_T0000231;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000231;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=start_codon:NA19239_ch_T0000231;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6551403	6554199	10000	-	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_178.3;transcript_id=NA19239_ch_T0000232;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_G0000078;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=NA19239_ch_T0000232;Name=TSPY10
NA19239_chrY	CAT	exon	6551403	6551613	.	-	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_178.3;transcript_id=NA19239_ch_T0000232;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000232;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000232:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6551614	6552307	.	-	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_178.3;transcript_id=NA19239_ch_T0000232;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000232;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000232:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6552308	6552389	.	-	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_178.3;transcript_id=NA19239_ch_T0000232;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000232;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000232:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6552338	6552389	.	-	1	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_178.3;transcript_id=NA19239_ch_T0000232;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000232;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000232:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6552338	6552340	.	-	0	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_178.3;transcript_id=NA19239_ch_T0000232;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000232;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=stop_codon:NA19239_ch_T0000232;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6552390	6552495	.	-	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_178.3;transcript_id=NA19239_ch_T0000232;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000232;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000232:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6552496	6552634	.	-	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_178.3;transcript_id=NA19239_ch_T0000232;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000232;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000232:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6552496	6552634	.	-	2	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_178.3;transcript_id=NA19239_ch_T0000232;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000232;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000232:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6552635	6552742	.	-	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_178.3;transcript_id=NA19239_ch_T0000232;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000232;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000232:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6552743	6552854	.	-	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_178.3;transcript_id=NA19239_ch_T0000232;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000232;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000232:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6552743	6552854	.	-	0	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_178.3;transcript_id=NA19239_ch_T0000232;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000232;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000232:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6552855	6552982	.	-	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_178.3;transcript_id=NA19239_ch_T0000232;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000232;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000232:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6552983	6553060	.	-	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_178.3;transcript_id=NA19239_ch_T0000232;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000232;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000232:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6552983	6553060	.	-	0	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_178.3;transcript_id=NA19239_ch_T0000232;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000232;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000232:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6553061	6553667	.	-	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_178.3;transcript_id=NA19239_ch_T0000232;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000232;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000232:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6553668	6554199	.	-	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_178.3;transcript_id=NA19239_ch_T0000232;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000232;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000232:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6553668	6554153	.	-	0	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_178.3;transcript_id=NA19239_ch_T0000232;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000232;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000232:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6554151	6554153	.	-	0	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_178.3;transcript_id=NA19239_ch_T0000232;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000232;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=start_codon:NA19239_ch_T0000232;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6551403	6554199	1000	-	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_178.4;transcript_id=NA19239_ch_T0000233;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_G0000078;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=NA19239_ch_T0000233;Name=TSPY10
NA19239_chrY	CAT	exon	6551403	6551613	.	-	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_178.4;transcript_id=NA19239_ch_T0000233;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000233;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000233:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6551614	6552307	.	-	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_178.4;transcript_id=NA19239_ch_T0000233;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000233;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000233:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6552308	6552400	.	-	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_178.4;transcript_id=NA19239_ch_T0000233;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000233;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000233:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6552401	6552495	.	-	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_178.4;transcript_id=NA19239_ch_T0000233;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000233;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000233:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6552496	6552634	.	-	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_178.4;transcript_id=NA19239_ch_T0000233;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000233;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000233:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6552635	6552742	.	-	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_178.4;transcript_id=NA19239_ch_T0000233;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000233;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000233:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6552743	6552854	.	-	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_178.4;transcript_id=NA19239_ch_T0000233;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000233;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000233:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6552855	6552982	.	-	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_178.4;transcript_id=NA19239_ch_T0000233;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000233;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000233:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6552983	6553060	.	-	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_178.4;transcript_id=NA19239_ch_T0000233;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000233;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000233:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6553061	6553667	.	-	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_178.4;transcript_id=NA19239_ch_T0000233;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000233;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000233:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6553668	6554199	.	-	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_178.4;transcript_id=NA19239_ch_T0000233;gene_id=NA19239_ch_G0000078;Parent=NA19239_ch_T0000233;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000233:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6556812	6562423	.	+	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_201;alternative_source_transcripts=hg002_chrY_paternal_177.1;gene_id=NA19239_ch_G0000079;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=NA19239_ch_G0000079;Name=FAM197Y3
NA19239_chrY	CAT	transcript	6556812	6562423	1000	+	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_177.1;transcript_id=NA19239_ch_T0000234;gene_id=NA19239_ch_G0000079;Parent=NA19239_ch_G0000079;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=NA19239_ch_T0000234;Name=FAM197Y3
NA19239_chrY	CAT	exon	6556812	6556913	.	+	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_177.1;transcript_id=NA19239_ch_T0000234;gene_id=NA19239_ch_G0000079;Parent=NA19239_ch_T0000234;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=exon:NA19239_ch_T0000234:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6556914	6556999	.	+	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_177.1;transcript_id=NA19239_ch_T0000234;gene_id=NA19239_ch_G0000079;Parent=NA19239_ch_T0000234;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=intron:NA19239_ch_T0000234:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6557000	6557145	.	+	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_177.1;transcript_id=NA19239_ch_T0000234;gene_id=NA19239_ch_G0000079;Parent=NA19239_ch_T0000234;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=exon:NA19239_ch_T0000234:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6557146	6558653	.	+	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_177.1;transcript_id=NA19239_ch_T0000234;gene_id=NA19239_ch_G0000079;Parent=NA19239_ch_T0000234;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=intron:NA19239_ch_T0000234:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6558654	6558812	.	+	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_177.1;transcript_id=NA19239_ch_T0000234;gene_id=NA19239_ch_G0000079;Parent=NA19239_ch_T0000234;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=exon:NA19239_ch_T0000234:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6558813	6562363	.	+	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_177.1;transcript_id=NA19239_ch_T0000234;gene_id=NA19239_ch_G0000079;Parent=NA19239_ch_T0000234;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=intron:NA19239_ch_T0000234:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6562364	6562423	.	+	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_177.1;transcript_id=NA19239_ch_T0000234;gene_id=NA19239_ch_G0000079;Parent=NA19239_ch_T0000234;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=exon:NA19239_ch_T0000234:3;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6571691	6574487	.	-	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_200;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_176.1;gene_id=NA19239_ch_G0000080;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=NA19239_ch_G0000080;Name=TSPY10
NA19239_chrY	CAT	transcript	6571691	6574487	9970	-	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=299.676;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_176.1;transcript_id=NA19239_ch_T0000235;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_G0000080;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=NA19239_ch_T0000235;Name=TSPY10
NA19239_chrY	CAT	exon	6571691	6571901	.	-	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=299.676;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_176.1;transcript_id=NA19239_ch_T0000235;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000235;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000235:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6571879	6571901	.	-	2	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=299.676;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_176.1;transcript_id=NA19239_ch_T0000235;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000235;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000235:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6571879	6571881	.	-	0	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=299.676;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_176.1;transcript_id=NA19239_ch_T0000235;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000235;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=stop_codon:NA19239_ch_T0000235;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6571902	6572595	.	-	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=299.676;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_176.1;transcript_id=NA19239_ch_T0000235;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000235;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000235:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6572596	6572677	.	-	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=299.676;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_176.1;transcript_id=NA19239_ch_T0000235;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000235;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000235:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6572596	6572677	.	-	0	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=299.676;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_176.1;transcript_id=NA19239_ch_T0000235;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000235;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000235:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6572678	6572783	.	-	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=299.676;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_176.1;transcript_id=NA19239_ch_T0000235;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000235;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000235:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6572784	6572929	.	-	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=299.676;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_176.1;transcript_id=NA19239_ch_T0000235;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000235;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000235:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6572784	6572929	.	-	2	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=299.676;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_176.1;transcript_id=NA19239_ch_T0000235;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000235;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000235:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6572930	6573030	.	-	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=299.676;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_176.1;transcript_id=NA19239_ch_T0000235;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000235;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000235:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6573031	6573142	.	-	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=299.676;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_176.1;transcript_id=NA19239_ch_T0000235;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000235;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000235:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6573031	6573142	.	-	0	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=299.676;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_176.1;transcript_id=NA19239_ch_T0000235;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000235;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000235:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6573143	6573270	.	-	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=299.676;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_176.1;transcript_id=NA19239_ch_T0000235;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000235;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000235:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6573271	6573348	.	-	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=299.676;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_176.1;transcript_id=NA19239_ch_T0000235;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000235;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000235:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6573271	6573348	.	-	0	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=299.676;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_176.1;transcript_id=NA19239_ch_T0000235;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000235;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000235:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6573349	6573955	.	-	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=299.676;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_176.1;transcript_id=NA19239_ch_T0000235;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000235;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000235:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6573956	6574487	.	-	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=299.676;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_176.1;transcript_id=NA19239_ch_T0000235;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000235;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000235:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6573956	6574441	.	-	0	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=299.676;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_176.1;transcript_id=NA19239_ch_T0000235;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000235;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000235:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6574439	6574441	.	-	0	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=299.676;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_176.1;transcript_id=NA19239_ch_T0000235;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000235;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=start_codon:NA19239_ch_T0000235;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6571691	6574487	9970	-	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=299.661;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_176.2;transcript_id=NA19239_ch_T0000236;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_G0000080;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=NA19239_ch_T0000236;Name=TSPY10
NA19239_chrY	CAT	exon	6571691	6571901	.	-	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=299.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_176.2;transcript_id=NA19239_ch_T0000236;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000236;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000236:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6571902	6572595	.	-	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=299.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_176.2;transcript_id=NA19239_ch_T0000236;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000236;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000236:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6572596	6572688	.	-	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=299.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_176.2;transcript_id=NA19239_ch_T0000236;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000236;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000236:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6572626	6572688	.	-	0	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=299.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_176.2;transcript_id=NA19239_ch_T0000236;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000236;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000236:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6572626	6572628	.	-	0	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=299.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_176.2;transcript_id=NA19239_ch_T0000236;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000236;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=stop_codon:NA19239_ch_T0000236;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6572689	6572783	.	-	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=299.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_176.2;transcript_id=NA19239_ch_T0000236;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000236;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000236:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6572784	6572929	.	-	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=299.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_176.2;transcript_id=NA19239_ch_T0000236;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000236;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000236:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6572784	6572929	.	-	2	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=299.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_176.2;transcript_id=NA19239_ch_T0000236;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000236;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000236:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6572930	6573030	.	-	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=299.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_176.2;transcript_id=NA19239_ch_T0000236;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000236;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000236:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6573031	6573142	.	-	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=299.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_176.2;transcript_id=NA19239_ch_T0000236;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000236;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000236:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6573031	6573142	.	-	0	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=299.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_176.2;transcript_id=NA19239_ch_T0000236;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000236;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000236:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6573143	6573270	.	-	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=299.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_176.2;transcript_id=NA19239_ch_T0000236;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000236;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000236:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6573271	6573348	.	-	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=299.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_176.2;transcript_id=NA19239_ch_T0000236;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000236;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000236:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6573271	6573348	.	-	0	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=299.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_176.2;transcript_id=NA19239_ch_T0000236;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000236;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000236:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6573349	6573955	.	-	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=299.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_176.2;transcript_id=NA19239_ch_T0000236;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000236;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000236:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6573956	6574487	.	-	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=299.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_176.2;transcript_id=NA19239_ch_T0000236;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000236;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000236:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6573956	6574441	.	-	0	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=299.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_176.2;transcript_id=NA19239_ch_T0000236;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000236;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000236:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6574439	6574441	.	-	0	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=299.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_176.2;transcript_id=NA19239_ch_T0000236;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000236;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=start_codon:NA19239_ch_T0000236;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6571691	6574487	9970	-	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=299.654;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3,hg002_chrY_paternal_176.3;transcript_id=NA19239_ch_T0000237;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_G0000080;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=NA19239_ch_T0000237;Name=TSPY10
NA19239_chrY	CAT	exon	6571691	6571901	.	-	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=299.654;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3,hg002_chrY_paternal_176.3;transcript_id=NA19239_ch_T0000237;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000237;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000237:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6571902	6572595	.	-	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=299.654;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3,hg002_chrY_paternal_176.3;transcript_id=NA19239_ch_T0000237;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000237;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000237:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6572596	6572677	.	-	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=299.654;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3,hg002_chrY_paternal_176.3;transcript_id=NA19239_ch_T0000237;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000237;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000237:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6572626	6572677	.	-	1	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=299.654;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3,hg002_chrY_paternal_176.3;transcript_id=NA19239_ch_T0000237;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000237;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000237:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6572626	6572628	.	-	0	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=299.654;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3,hg002_chrY_paternal_176.3;transcript_id=NA19239_ch_T0000237;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000237;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=stop_codon:NA19239_ch_T0000237;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6572678	6572783	.	-	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=299.654;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3,hg002_chrY_paternal_176.3;transcript_id=NA19239_ch_T0000237;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000237;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000237:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6572784	6572922	.	-	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=299.654;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3,hg002_chrY_paternal_176.3;transcript_id=NA19239_ch_T0000237;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000237;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000237:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6572784	6572922	.	-	2	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=299.654;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3,hg002_chrY_paternal_176.3;transcript_id=NA19239_ch_T0000237;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000237;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000237:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6572923	6573030	.	-	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=299.654;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3,hg002_chrY_paternal_176.3;transcript_id=NA19239_ch_T0000237;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000237;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000237:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6573031	6573142	.	-	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=299.654;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3,hg002_chrY_paternal_176.3;transcript_id=NA19239_ch_T0000237;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000237;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000237:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6573031	6573142	.	-	0	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=299.654;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3,hg002_chrY_paternal_176.3;transcript_id=NA19239_ch_T0000237;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000237;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000237:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6573143	6573270	.	-	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=299.654;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3,hg002_chrY_paternal_176.3;transcript_id=NA19239_ch_T0000237;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000237;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000237:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6573271	6573348	.	-	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=299.654;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3,hg002_chrY_paternal_176.3;transcript_id=NA19239_ch_T0000237;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000237;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000237:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6573271	6573348	.	-	0	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=299.654;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3,hg002_chrY_paternal_176.3;transcript_id=NA19239_ch_T0000237;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000237;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000237:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6573349	6573955	.	-	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=299.654;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3,hg002_chrY_paternal_176.3;transcript_id=NA19239_ch_T0000237;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000237;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000237:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6573956	6574487	.	-	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=299.654;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3,hg002_chrY_paternal_176.3;transcript_id=NA19239_ch_T0000237;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000237;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000237:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6573956	6574441	.	-	0	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=299.654;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3,hg002_chrY_paternal_176.3;transcript_id=NA19239_ch_T0000237;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000237;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000237:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6574439	6574441	.	-	0	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=299.654;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3,hg002_chrY_paternal_176.3;transcript_id=NA19239_ch_T0000237;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000237;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=start_codon:NA19239_ch_T0000237;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6571691	6574487	1000	-	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4,hg002_chrY_paternal_176.4;transcript_id=NA19239_ch_T0000238;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_G0000080;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=NA19239_ch_T0000238;Name=TSPY10
NA19239_chrY	CAT	exon	6571691	6571901	.	-	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4,hg002_chrY_paternal_176.4;transcript_id=NA19239_ch_T0000238;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000238;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000238:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6571902	6572595	.	-	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4,hg002_chrY_paternal_176.4;transcript_id=NA19239_ch_T0000238;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000238;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000238:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6572596	6572688	.	-	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4,hg002_chrY_paternal_176.4;transcript_id=NA19239_ch_T0000238;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000238;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000238:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6572689	6572783	.	-	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4,hg002_chrY_paternal_176.4;transcript_id=NA19239_ch_T0000238;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000238;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000238:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6572784	6572922	.	-	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4,hg002_chrY_paternal_176.4;transcript_id=NA19239_ch_T0000238;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000238;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000238:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6572923	6573030	.	-	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4,hg002_chrY_paternal_176.4;transcript_id=NA19239_ch_T0000238;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000238;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000238:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6573031	6573142	.	-	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4,hg002_chrY_paternal_176.4;transcript_id=NA19239_ch_T0000238;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000238;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000238:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6573143	6573270	.	-	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4,hg002_chrY_paternal_176.4;transcript_id=NA19239_ch_T0000238;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000238;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000238:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6573271	6573348	.	-	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4,hg002_chrY_paternal_176.4;transcript_id=NA19239_ch_T0000238;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000238;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000238:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6573349	6573955	.	-	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4,hg002_chrY_paternal_176.4;transcript_id=NA19239_ch_T0000238;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000238;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000238:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6573956	6574487	.	-	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4,hg002_chrY_paternal_176.4;transcript_id=NA19239_ch_T0000238;gene_id=NA19239_ch_G0000080;Parent=NA19239_ch_T0000238;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000238:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6577011	6582697	.	+	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_229;alternative_source_transcripts=hg002_chrY_paternal_183.1,hg002_chrY_paternal_175.1;gene_id=NA19239_ch_G0000081;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=NA19239_ch_G0000081;Name=FAM197Y2
NA19239_chrY	CAT	transcript	6577011	6582697	1000	+	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1,hg002_chrY_paternal_175.1;transcript_id=NA19239_ch_T0000239;gene_id=NA19239_ch_G0000081;Parent=NA19239_ch_G0000081;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=NA19239_ch_T0000239;Name=FAM197Y2
NA19239_chrY	CAT	exon	6577011	6577201	.	+	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1,hg002_chrY_paternal_175.1;transcript_id=NA19239_ch_T0000239;gene_id=NA19239_ch_G0000081;Parent=NA19239_ch_T0000239;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000239:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6577202	6577287	.	+	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1,hg002_chrY_paternal_175.1;transcript_id=NA19239_ch_T0000239;gene_id=NA19239_ch_G0000081;Parent=NA19239_ch_T0000239;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000239:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6577288	6577433	.	+	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1,hg002_chrY_paternal_175.1;transcript_id=NA19239_ch_T0000239;gene_id=NA19239_ch_G0000081;Parent=NA19239_ch_T0000239;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000239:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6577434	6578929	.	+	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1,hg002_chrY_paternal_175.1;transcript_id=NA19239_ch_T0000239;gene_id=NA19239_ch_G0000081;Parent=NA19239_ch_T0000239;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000239:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6578930	6579088	.	+	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1,hg002_chrY_paternal_175.1;transcript_id=NA19239_ch_T0000239;gene_id=NA19239_ch_G0000081;Parent=NA19239_ch_T0000239;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000239:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6579089	6582637	.	+	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1,hg002_chrY_paternal_175.1;transcript_id=NA19239_ch_T0000239;gene_id=NA19239_ch_G0000081;Parent=NA19239_ch_T0000239;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000239:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6582638	6582697	.	+	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1,hg002_chrY_paternal_175.1;transcript_id=NA19239_ch_T0000239;gene_id=NA19239_ch_G0000081;Parent=NA19239_ch_T0000239;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000239:3;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6591988	6594784	.	-	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_230;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_174.1;gene_id=NA19239_ch_G0000082;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=NA19239_ch_G0000082;Name=TSPY1
NA19239_chrY	CAT	transcript	6591988	6594784	10000	-	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_174.1;transcript_id=NA19239_ch_T0000240;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_G0000082;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=NA19239_ch_T0000240;Name=TSPY1
NA19239_chrY	CAT	exon	6591988	6592198	.	-	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_174.1;transcript_id=NA19239_ch_T0000240;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000240;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000240:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6592176	6592198	.	-	2	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_174.1;transcript_id=NA19239_ch_T0000240;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000240;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000240:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6592176	6592178	.	-	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_174.1;transcript_id=NA19239_ch_T0000240;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000240;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=stop_codon:NA19239_ch_T0000240;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6592199	6592892	.	-	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_174.1;transcript_id=NA19239_ch_T0000240;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000240;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000240:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6592893	6592974	.	-	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_174.1;transcript_id=NA19239_ch_T0000240;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000240;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000240:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6592893	6592974	.	-	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_174.1;transcript_id=NA19239_ch_T0000240;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000240;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000240:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6592975	6593080	.	-	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_174.1;transcript_id=NA19239_ch_T0000240;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000240;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000240:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6593081	6593226	.	-	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_174.1;transcript_id=NA19239_ch_T0000240;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000240;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000240:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6593081	6593226	.	-	2	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_174.1;transcript_id=NA19239_ch_T0000240;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000240;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000240:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6593227	6593327	.	-	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_174.1;transcript_id=NA19239_ch_T0000240;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000240;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000240:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6593328	6593439	.	-	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_174.1;transcript_id=NA19239_ch_T0000240;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000240;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000240:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6593328	6593439	.	-	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_174.1;transcript_id=NA19239_ch_T0000240;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000240;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000240:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6593440	6593567	.	-	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_174.1;transcript_id=NA19239_ch_T0000240;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000240;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000240:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6593568	6593645	.	-	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_174.1;transcript_id=NA19239_ch_T0000240;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000240;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000240:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6593568	6593645	.	-	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_174.1;transcript_id=NA19239_ch_T0000240;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000240;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000240:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6593646	6594252	.	-	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_174.1;transcript_id=NA19239_ch_T0000240;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000240;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000240:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6594253	6594784	.	-	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_174.1;transcript_id=NA19239_ch_T0000240;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000240;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000240:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6594253	6594738	.	-	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_174.1;transcript_id=NA19239_ch_T0000240;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000240;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000240:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6594736	6594738	.	-	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_174.1;transcript_id=NA19239_ch_T0000240;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000240;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=start_codon:NA19239_ch_T0000240;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6591988	6594784	10000	-	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_174.2;transcript_id=NA19239_ch_T0000241;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_G0000082;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=NA19239_ch_T0000241;Name=TSPY1
NA19239_chrY	CAT	exon	6591988	6592198	.	-	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_174.2;transcript_id=NA19239_ch_T0000241;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000241;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000241:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6592199	6592892	.	-	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_174.2;transcript_id=NA19239_ch_T0000241;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000241;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000241:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6592893	6592985	.	-	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_174.2;transcript_id=NA19239_ch_T0000241;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000241;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000241:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6592923	6592985	.	-	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_174.2;transcript_id=NA19239_ch_T0000241;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000241;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000241:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6592923	6592925	.	-	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_174.2;transcript_id=NA19239_ch_T0000241;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000241;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=stop_codon:NA19239_ch_T0000241;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6592986	6593080	.	-	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_174.2;transcript_id=NA19239_ch_T0000241;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000241;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000241:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6593081	6593226	.	-	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_174.2;transcript_id=NA19239_ch_T0000241;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000241;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000241:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6593081	6593226	.	-	2	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_174.2;transcript_id=NA19239_ch_T0000241;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000241;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000241:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6593227	6593327	.	-	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_174.2;transcript_id=NA19239_ch_T0000241;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000241;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000241:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6593328	6593439	.	-	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_174.2;transcript_id=NA19239_ch_T0000241;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000241;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000241:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6593328	6593439	.	-	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_174.2;transcript_id=NA19239_ch_T0000241;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000241;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000241:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6593440	6593567	.	-	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_174.2;transcript_id=NA19239_ch_T0000241;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000241;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000241:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6593568	6593645	.	-	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_174.2;transcript_id=NA19239_ch_T0000241;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000241;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000241:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6593568	6593645	.	-	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_174.2;transcript_id=NA19239_ch_T0000241;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000241;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000241:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6593646	6594252	.	-	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_174.2;transcript_id=NA19239_ch_T0000241;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000241;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000241:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6594253	6594784	.	-	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_174.2;transcript_id=NA19239_ch_T0000241;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000241;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000241:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6594253	6594738	.	-	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_174.2;transcript_id=NA19239_ch_T0000241;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000241;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000241:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6594736	6594738	.	-	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_174.2;transcript_id=NA19239_ch_T0000241;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000241;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=start_codon:NA19239_ch_T0000241;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6591988	6594784	10000	-	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_174.3;transcript_id=NA19239_ch_T0000242;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_G0000082;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=NA19239_ch_T0000242;Name=TSPY1
NA19239_chrY	CAT	exon	6591988	6592198	.	-	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_174.3;transcript_id=NA19239_ch_T0000242;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000242;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000242:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6592199	6592892	.	-	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_174.3;transcript_id=NA19239_ch_T0000242;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000242;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000242:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6592893	6592974	.	-	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_174.3;transcript_id=NA19239_ch_T0000242;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000242;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000242:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6592923	6592974	.	-	1	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_174.3;transcript_id=NA19239_ch_T0000242;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000242;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000242:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6592923	6592925	.	-	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_174.3;transcript_id=NA19239_ch_T0000242;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000242;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=stop_codon:NA19239_ch_T0000242;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6592975	6593080	.	-	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_174.3;transcript_id=NA19239_ch_T0000242;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000242;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000242:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6593081	6593219	.	-	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_174.3;transcript_id=NA19239_ch_T0000242;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000242;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000242:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6593081	6593219	.	-	2	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_174.3;transcript_id=NA19239_ch_T0000242;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000242;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000242:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6593220	6593327	.	-	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_174.3;transcript_id=NA19239_ch_T0000242;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000242;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000242:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6593328	6593439	.	-	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_174.3;transcript_id=NA19239_ch_T0000242;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000242;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000242:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6593328	6593439	.	-	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_174.3;transcript_id=NA19239_ch_T0000242;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000242;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000242:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6593440	6593567	.	-	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_174.3;transcript_id=NA19239_ch_T0000242;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000242;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000242:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6593568	6593645	.	-	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_174.3;transcript_id=NA19239_ch_T0000242;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000242;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000242:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6593568	6593645	.	-	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_174.3;transcript_id=NA19239_ch_T0000242;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000242;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000242:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6593646	6594252	.	-	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_174.3;transcript_id=NA19239_ch_T0000242;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000242;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000242:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6594253	6594784	.	-	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_174.3;transcript_id=NA19239_ch_T0000242;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000242;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000242:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6594253	6594738	.	-	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_174.3;transcript_id=NA19239_ch_T0000242;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000242;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000242:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6594736	6594738	.	-	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_174.3;transcript_id=NA19239_ch_T0000242;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000242;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=start_codon:NA19239_ch_T0000242;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6591988	6594784	1000	-	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_182.4;transcript_id=NA19239_ch_T0000243;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_G0000082;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=NA19239_ch_T0000243;Name=TSPY1
NA19239_chrY	CAT	exon	6591988	6592198	.	-	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_182.4;transcript_id=NA19239_ch_T0000243;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000243;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:NA19239_ch_T0000243:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6592199	6592892	.	-	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_182.4;transcript_id=NA19239_ch_T0000243;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000243;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:NA19239_ch_T0000243:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6592893	6592985	.	-	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_182.4;transcript_id=NA19239_ch_T0000243;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000243;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:NA19239_ch_T0000243:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6592986	6593080	.	-	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_182.4;transcript_id=NA19239_ch_T0000243;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000243;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:NA19239_ch_T0000243:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6593081	6593219	.	-	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_182.4;transcript_id=NA19239_ch_T0000243;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000243;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:NA19239_ch_T0000243:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6593220	6593327	.	-	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_182.4;transcript_id=NA19239_ch_T0000243;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000243;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:NA19239_ch_T0000243:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6593328	6593439	.	-	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_182.4;transcript_id=NA19239_ch_T0000243;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000243;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:NA19239_ch_T0000243:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6593440	6593567	.	-	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_182.4;transcript_id=NA19239_ch_T0000243;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000243;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:NA19239_ch_T0000243:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6593568	6593645	.	-	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_182.4;transcript_id=NA19239_ch_T0000243;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000243;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:NA19239_ch_T0000243:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6593646	6594252	.	-	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_182.4;transcript_id=NA19239_ch_T0000243;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000243;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:NA19239_ch_T0000243:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6594253	6594784	.	-	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_182.4;transcript_id=NA19239_ch_T0000243;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000243;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:NA19239_ch_T0000243:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6591988	6594784	10000	-	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000244;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_G0000082;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=NA19239_ch_T0000244;Name=TSPY1
NA19239_chrY	CAT	exon	6591988	6592198	.	-	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000244;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000244;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000244:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6592176	6592198	.	-	2	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000244;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000244;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000244:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6592176	6592178	.	-	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000244;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000244;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=stop_codon:NA19239_ch_T0000244;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6592199	6592892	.	-	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000244;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000244;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000244:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6592893	6592974	.	-	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000244;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000244;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000244:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6592893	6592974	.	-	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000244;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000244;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000244:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6592975	6593080	.	-	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000244;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000244;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000244:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6593081	6593226	.	-	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000244;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000244;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000244:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6593081	6593226	.	-	2	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000244;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000244;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000244:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6593227	6593327	.	-	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000244;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000244;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000244:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6593328	6593439	.	-	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000244;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000244;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000244:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6593328	6593439	.	-	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000244;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000244;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000244:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6593440	6593567	.	-	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000244;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000244;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000244:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6593568	6593645	.	-	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000244;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000244;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000244:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6593568	6593645	.	-	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000244;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000244;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000244:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6593646	6594252	.	-	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000244;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000244;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000244:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6594253	6594390	.	-	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000244;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000244;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000244:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6594253	6594390	.	-	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000244;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000244;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000244:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6594391	6594651	.	-	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000244;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000244;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000244:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6594652	6594784	.	-	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000244;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000244;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000244:6;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6594652	6594738	.	-	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000244;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000244;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000244:6;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6594736	6594738	.	-	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19239_ch_T0000244;gene_id=NA19239_ch_G0000082;Parent=NA19239_ch_T0000244;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=start_codon:NA19239_ch_T0000244;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6597309	6602993	.	+	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_193;alternative_source_transcripts=hg002_chrY_paternal_181.1,hg002_chrY_paternal_173.1;gene_id=NA19239_ch_G0000083;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=NA19239_ch_G0000083;Name=FAM197Y2
NA19239_chrY	CAT	transcript	6597309	6602993	1000	+	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1,hg002_chrY_paternal_173.1;transcript_id=NA19239_ch_T0000245;gene_id=NA19239_ch_G0000083;Parent=NA19239_ch_G0000083;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=NA19239_ch_T0000245;Name=FAM197Y2
NA19239_chrY	CAT	exon	6597309	6597499	.	+	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1,hg002_chrY_paternal_173.1;transcript_id=NA19239_ch_T0000245;gene_id=NA19239_ch_G0000083;Parent=NA19239_ch_T0000245;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000245:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6597500	6597585	.	+	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1,hg002_chrY_paternal_173.1;transcript_id=NA19239_ch_T0000245;gene_id=NA19239_ch_G0000083;Parent=NA19239_ch_T0000245;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000245:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6597586	6597731	.	+	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1,hg002_chrY_paternal_173.1;transcript_id=NA19239_ch_T0000245;gene_id=NA19239_ch_G0000083;Parent=NA19239_ch_T0000245;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000245:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6597732	6599227	.	+	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1,hg002_chrY_paternal_173.1;transcript_id=NA19239_ch_T0000245;gene_id=NA19239_ch_G0000083;Parent=NA19239_ch_T0000245;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000245:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6599228	6599386	.	+	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1,hg002_chrY_paternal_173.1;transcript_id=NA19239_ch_T0000245;gene_id=NA19239_ch_G0000083;Parent=NA19239_ch_T0000245;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000245:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6599387	6602933	.	+	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1,hg002_chrY_paternal_173.1;transcript_id=NA19239_ch_T0000245;gene_id=NA19239_ch_G0000083;Parent=NA19239_ch_T0000245;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000245:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6602934	6602993	.	+	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1,hg002_chrY_paternal_173.1;transcript_id=NA19239_ch_T0000245;gene_id=NA19239_ch_G0000083;Parent=NA19239_ch_T0000245;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000245:3;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6612293	6615090	.	-	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_234;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_172.1;gene_id=NA19239_ch_G0000084;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=NA19239_ch_G0000084;Name=TSPY10
NA19239_chrY	CAT	transcript	6612293	6615090	100	-	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_172.1;transcript_id=NA19239_ch_T0000246;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_G0000084;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=NA19239_ch_T0000246;Name=TSPY10
NA19239_chrY	CAT	exon	6612293	6612504	.	-	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_172.1;transcript_id=NA19239_ch_T0000246;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000246;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000246:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6612482	6612504	.	-	2	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_172.1;transcript_id=NA19239_ch_T0000246;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000246;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000246:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6612482	6612484	.	-	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_172.1;transcript_id=NA19239_ch_T0000246;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000246;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=stop_codon:NA19239_ch_T0000246;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6612505	6613198	.	-	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_172.1;transcript_id=NA19239_ch_T0000246;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000246;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000246:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6613199	6613280	.	-	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_172.1;transcript_id=NA19239_ch_T0000246;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000246;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000246:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6613199	6613280	.	-	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_172.1;transcript_id=NA19239_ch_T0000246;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000246;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000246:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6613281	6613386	.	-	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_172.1;transcript_id=NA19239_ch_T0000246;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000246;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000246:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6613387	6613532	.	-	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_172.1;transcript_id=NA19239_ch_T0000246;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000246;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000246:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6613387	6613532	.	-	2	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_172.1;transcript_id=NA19239_ch_T0000246;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000246;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000246:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6613533	6613633	.	-	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_172.1;transcript_id=NA19239_ch_T0000246;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000246;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000246:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6613634	6613745	.	-	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_172.1;transcript_id=NA19239_ch_T0000246;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000246;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000246:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6613634	6613745	.	-	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_172.1;transcript_id=NA19239_ch_T0000246;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000246;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000246:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6613746	6613873	.	-	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_172.1;transcript_id=NA19239_ch_T0000246;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000246;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000246:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6613874	6613951	.	-	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_172.1;transcript_id=NA19239_ch_T0000246;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000246;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000246:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6613874	6613951	.	-	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_172.1;transcript_id=NA19239_ch_T0000246;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000246;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000246:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6613952	6614558	.	-	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_172.1;transcript_id=NA19239_ch_T0000246;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000246;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000246:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6614559	6615090	.	-	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_172.1;transcript_id=NA19239_ch_T0000246;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000246;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000246:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6614559	6615044	.	-	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_172.1;transcript_id=NA19239_ch_T0000246;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000246;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000246:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6615042	6615044	.	-	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_172.1;transcript_id=NA19239_ch_T0000246;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000246;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=start_codon:NA19239_ch_T0000246;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6612293	6615090	100	-	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_172.2;transcript_id=NA19239_ch_T0000247;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_G0000084;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=NA19239_ch_T0000247;Name=TSPY10
NA19239_chrY	CAT	exon	6612293	6612504	.	-	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_172.2;transcript_id=NA19239_ch_T0000247;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000247;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000247:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6612505	6613198	.	-	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_172.2;transcript_id=NA19239_ch_T0000247;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000247;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000247:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6613199	6613291	.	-	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_172.2;transcript_id=NA19239_ch_T0000247;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000247;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000247:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6613229	6613291	.	-	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_172.2;transcript_id=NA19239_ch_T0000247;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000247;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000247:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6613229	6613231	.	-	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_172.2;transcript_id=NA19239_ch_T0000247;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000247;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=stop_codon:NA19239_ch_T0000247;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6613292	6613386	.	-	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_172.2;transcript_id=NA19239_ch_T0000247;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000247;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000247:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6613387	6613532	.	-	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_172.2;transcript_id=NA19239_ch_T0000247;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000247;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000247:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6613387	6613532	.	-	2	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_172.2;transcript_id=NA19239_ch_T0000247;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000247;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000247:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6613533	6613633	.	-	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_172.2;transcript_id=NA19239_ch_T0000247;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000247;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000247:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6613634	6613745	.	-	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_172.2;transcript_id=NA19239_ch_T0000247;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000247;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000247:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6613634	6613745	.	-	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_172.2;transcript_id=NA19239_ch_T0000247;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000247;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000247:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6613746	6613873	.	-	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_172.2;transcript_id=NA19239_ch_T0000247;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000247;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000247:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6613874	6613951	.	-	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_172.2;transcript_id=NA19239_ch_T0000247;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000247;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000247:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6613874	6613951	.	-	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_172.2;transcript_id=NA19239_ch_T0000247;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000247;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000247:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6613952	6614558	.	-	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_172.2;transcript_id=NA19239_ch_T0000247;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000247;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000247:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6614559	6615090	.	-	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_172.2;transcript_id=NA19239_ch_T0000247;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000247;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000247:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6614559	6615044	.	-	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_172.2;transcript_id=NA19239_ch_T0000247;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000247;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000247:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6615042	6615044	.	-	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_172.2;transcript_id=NA19239_ch_T0000247;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000247;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=start_codon:NA19239_ch_T0000247;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6612293	6615090	100	-	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_172.3;transcript_id=NA19239_ch_T0000248;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_G0000084;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=NA19239_ch_T0000248;Name=TSPY10
NA19239_chrY	CAT	exon	6612293	6612504	.	-	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_172.3;transcript_id=NA19239_ch_T0000248;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000248;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000248:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6612505	6613198	.	-	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_172.3;transcript_id=NA19239_ch_T0000248;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000248;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000248:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6613199	6613280	.	-	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_172.3;transcript_id=NA19239_ch_T0000248;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000248;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000248:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6613229	6613280	.	-	1	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_172.3;transcript_id=NA19239_ch_T0000248;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000248;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000248:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6613229	6613231	.	-	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_172.3;transcript_id=NA19239_ch_T0000248;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000248;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=stop_codon:NA19239_ch_T0000248;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6613281	6613386	.	-	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_172.3;transcript_id=NA19239_ch_T0000248;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000248;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000248:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6613387	6613525	.	-	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_172.3;transcript_id=NA19239_ch_T0000248;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000248;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000248:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6613387	6613525	.	-	2	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_172.3;transcript_id=NA19239_ch_T0000248;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000248;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000248:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6613526	6613633	.	-	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_172.3;transcript_id=NA19239_ch_T0000248;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000248;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000248:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6613634	6613745	.	-	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_172.3;transcript_id=NA19239_ch_T0000248;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000248;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000248:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6613634	6613745	.	-	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_172.3;transcript_id=NA19239_ch_T0000248;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000248;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000248:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6613746	6613873	.	-	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_172.3;transcript_id=NA19239_ch_T0000248;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000248;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000248:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6613874	6613951	.	-	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_172.3;transcript_id=NA19239_ch_T0000248;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000248;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000248:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6613874	6613951	.	-	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_172.3;transcript_id=NA19239_ch_T0000248;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000248;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000248:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6613952	6614558	.	-	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_172.3;transcript_id=NA19239_ch_T0000248;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000248;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000248:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6614559	6615090	.	-	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_172.3;transcript_id=NA19239_ch_T0000248;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000248;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000248:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6614559	6615044	.	-	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_172.3;transcript_id=NA19239_ch_T0000248;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000248;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000248:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6615042	6615044	.	-	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_172.3;transcript_id=NA19239_ch_T0000248;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000248;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=start_codon:NA19239_ch_T0000248;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6612293	6615090	1000	-	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_172.4;transcript_id=NA19239_ch_T0000249;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_G0000084;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=NA19239_ch_T0000249;Name=TSPY10
NA19239_chrY	CAT	exon	6612293	6612504	.	-	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_172.4;transcript_id=NA19239_ch_T0000249;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000249;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000249:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6612505	6613198	.	-	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_172.4;transcript_id=NA19239_ch_T0000249;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000249;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000249:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6613199	6613291	.	-	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_172.4;transcript_id=NA19239_ch_T0000249;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000249;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000249:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6613292	6613386	.	-	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_172.4;transcript_id=NA19239_ch_T0000249;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000249;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000249:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6613387	6613525	.	-	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_172.4;transcript_id=NA19239_ch_T0000249;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000249;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000249:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6613526	6613633	.	-	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_172.4;transcript_id=NA19239_ch_T0000249;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000249;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000249:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6613634	6613745	.	-	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_172.4;transcript_id=NA19239_ch_T0000249;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000249;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000249:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6613746	6613873	.	-	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_172.4;transcript_id=NA19239_ch_T0000249;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000249;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000249:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6613874	6613951	.	-	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_172.4;transcript_id=NA19239_ch_T0000249;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000249;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000249:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6613952	6614558	.	-	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_172.4;transcript_id=NA19239_ch_T0000249;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000249;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000249:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6614559	6615090	.	-	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_172.4;transcript_id=NA19239_ch_T0000249;gene_id=NA19239_ch_G0000084;Parent=NA19239_ch_T0000249;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000249:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6617614	6623306	.	+	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_231;alternative_source_transcripts=hg002_chrY_paternal_171.1;gene_id=NA19239_ch_G0000085;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=NA19239_ch_G0000085;Name=FAM197Y2
NA19239_chrY	CAT	transcript	6617614	6623306	1000	+	.	source_transcript=hg002_chrY_paternal_231.1;source_transcript_name=hg002_chrY_paternal_231.1;source_gene=hg002_chrY_paternal_231;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_231;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_231.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_231.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1;transcript_id=NA19239_ch_T0000250;gene_id=NA19239_ch_G0000085;Parent=NA19239_ch_G0000085;transcript_name=hg002_chrY_paternal_231.1;gene_name=FAM197Y2;ID=NA19239_ch_T0000250;Name=FAM197Y2
NA19239_chrY	CAT	exon	6617614	6617804	.	+	.	source_transcript=hg002_chrY_paternal_231.1;source_transcript_name=hg002_chrY_paternal_231.1;source_gene=hg002_chrY_paternal_231;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_231;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_231.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_231.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1;transcript_id=NA19239_ch_T0000250;gene_id=NA19239_ch_G0000085;Parent=NA19239_ch_T0000250;transcript_name=hg002_chrY_paternal_231.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000250:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6617805	6617890	.	+	.	source_transcript=hg002_chrY_paternal_231.1;source_transcript_name=hg002_chrY_paternal_231.1;source_gene=hg002_chrY_paternal_231;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_231;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_231.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_231.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1;transcript_id=NA19239_ch_T0000250;gene_id=NA19239_ch_G0000085;Parent=NA19239_ch_T0000250;transcript_name=hg002_chrY_paternal_231.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000250:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6617891	6618036	.	+	.	source_transcript=hg002_chrY_paternal_231.1;source_transcript_name=hg002_chrY_paternal_231.1;source_gene=hg002_chrY_paternal_231;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_231;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_231.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_231.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1;transcript_id=NA19239_ch_T0000250;gene_id=NA19239_ch_G0000085;Parent=NA19239_ch_T0000250;transcript_name=hg002_chrY_paternal_231.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000250:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6618037	6619536	.	+	.	source_transcript=hg002_chrY_paternal_231.1;source_transcript_name=hg002_chrY_paternal_231.1;source_gene=hg002_chrY_paternal_231;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_231;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_231.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_231.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1;transcript_id=NA19239_ch_T0000250;gene_id=NA19239_ch_G0000085;Parent=NA19239_ch_T0000250;transcript_name=hg002_chrY_paternal_231.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000250:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6619537	6619695	.	+	.	source_transcript=hg002_chrY_paternal_231.1;source_transcript_name=hg002_chrY_paternal_231.1;source_gene=hg002_chrY_paternal_231;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_231;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_231.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_231.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1;transcript_id=NA19239_ch_T0000250;gene_id=NA19239_ch_G0000085;Parent=NA19239_ch_T0000250;transcript_name=hg002_chrY_paternal_231.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000250:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6619696	6623246	.	+	.	source_transcript=hg002_chrY_paternal_231.1;source_transcript_name=hg002_chrY_paternal_231.1;source_gene=hg002_chrY_paternal_231;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_231;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_231.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_231.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1;transcript_id=NA19239_ch_T0000250;gene_id=NA19239_ch_G0000085;Parent=NA19239_ch_T0000250;transcript_name=hg002_chrY_paternal_231.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000250:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6623247	6623306	.	+	.	source_transcript=hg002_chrY_paternal_231.1;source_transcript_name=hg002_chrY_paternal_231.1;source_gene=hg002_chrY_paternal_231;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_231;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_231.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_231.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1;transcript_id=NA19239_ch_T0000250;gene_id=NA19239_ch_G0000085;Parent=NA19239_ch_T0000250;transcript_name=hg002_chrY_paternal_231.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000250:3;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6632575	6635371	.	-	.	source_gene_common_name=TSPY3;source_gene=hg002_chrY_paternal_164;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_170.1;gene_id=NA19239_ch_G0000086;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=NA19239_ch_G0000086;Name=TSPY3
NA19239_chrY	CAT	transcript	6632575	6635371	100	-	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_170.1;transcript_id=NA19239_ch_T0000251;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_G0000086;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=NA19239_ch_T0000251;Name=TSPY3
NA19239_chrY	CAT	exon	6632575	6632785	.	-	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_170.1;transcript_id=NA19239_ch_T0000251;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000251;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19239_ch_T0000251:0;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6632763	6632785	.	-	2	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_170.1;transcript_id=NA19239_ch_T0000251;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000251;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:NA19239_ch_T0000251:0;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6632763	6632765	.	-	0	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_170.1;transcript_id=NA19239_ch_T0000251;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000251;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=stop_codon:NA19239_ch_T0000251;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6632786	6633479	.	-	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_170.1;transcript_id=NA19239_ch_T0000251;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000251;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:NA19239_ch_T0000251:0;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6633480	6633561	.	-	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_170.1;transcript_id=NA19239_ch_T0000251;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000251;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19239_ch_T0000251:1;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6633480	6633561	.	-	0	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_170.1;transcript_id=NA19239_ch_T0000251;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000251;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:NA19239_ch_T0000251:1;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6633562	6633667	.	-	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_170.1;transcript_id=NA19239_ch_T0000251;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000251;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:NA19239_ch_T0000251:1;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6633668	6633813	.	-	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_170.1;transcript_id=NA19239_ch_T0000251;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000251;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19239_ch_T0000251:2;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6633668	6633813	.	-	2	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_170.1;transcript_id=NA19239_ch_T0000251;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000251;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:NA19239_ch_T0000251:2;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6633814	6633914	.	-	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_170.1;transcript_id=NA19239_ch_T0000251;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000251;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:NA19239_ch_T0000251:2;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6633915	6634026	.	-	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_170.1;transcript_id=NA19239_ch_T0000251;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000251;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19239_ch_T0000251:3;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6633915	6634026	.	-	0	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_170.1;transcript_id=NA19239_ch_T0000251;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000251;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:NA19239_ch_T0000251:3;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6634027	6634154	.	-	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_170.1;transcript_id=NA19239_ch_T0000251;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000251;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:NA19239_ch_T0000251:3;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6634155	6634232	.	-	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_170.1;transcript_id=NA19239_ch_T0000251;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000251;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19239_ch_T0000251:4;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6634155	6634232	.	-	0	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_170.1;transcript_id=NA19239_ch_T0000251;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000251;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:NA19239_ch_T0000251:4;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6634233	6634839	.	-	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_170.1;transcript_id=NA19239_ch_T0000251;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000251;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:NA19239_ch_T0000251:4;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6634840	6635371	.	-	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_170.1;transcript_id=NA19239_ch_T0000251;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000251;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19239_ch_T0000251:5;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6634840	6635325	.	-	0	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_170.1;transcript_id=NA19239_ch_T0000251;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000251;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:NA19239_ch_T0000251:5;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6635323	6635325	.	-	0	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_170.1;transcript_id=NA19239_ch_T0000251;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000251;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=start_codon:NA19239_ch_T0000251;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6632575	6635371	100	-	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_170.2;transcript_id=NA19239_ch_T0000252;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_G0000086;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=NA19239_ch_T0000252;Name=TSPY3
NA19239_chrY	CAT	exon	6632575	6632785	.	-	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_170.2;transcript_id=NA19239_ch_T0000252;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000252;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19239_ch_T0000252:0;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6632786	6633479	.	-	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_170.2;transcript_id=NA19239_ch_T0000252;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000252;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:NA19239_ch_T0000252:0;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6633480	6633572	.	-	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_170.2;transcript_id=NA19239_ch_T0000252;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000252;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19239_ch_T0000252:1;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6633510	6633572	.	-	0	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_170.2;transcript_id=NA19239_ch_T0000252;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000252;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:NA19239_ch_T0000252:0;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6633510	6633512	.	-	0	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_170.2;transcript_id=NA19239_ch_T0000252;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000252;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=stop_codon:NA19239_ch_T0000252;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6633573	6633667	.	-	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_170.2;transcript_id=NA19239_ch_T0000252;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000252;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:NA19239_ch_T0000252:1;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6633668	6633813	.	-	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_170.2;transcript_id=NA19239_ch_T0000252;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000252;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19239_ch_T0000252:2;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6633668	6633813	.	-	2	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_170.2;transcript_id=NA19239_ch_T0000252;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000252;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:NA19239_ch_T0000252:1;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6633814	6633914	.	-	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_170.2;transcript_id=NA19239_ch_T0000252;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000252;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:NA19239_ch_T0000252:2;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6633915	6634026	.	-	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_170.2;transcript_id=NA19239_ch_T0000252;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000252;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19239_ch_T0000252:3;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6633915	6634026	.	-	0	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_170.2;transcript_id=NA19239_ch_T0000252;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000252;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:NA19239_ch_T0000252:2;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6634027	6634154	.	-	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_170.2;transcript_id=NA19239_ch_T0000252;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000252;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:NA19239_ch_T0000252:3;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6634155	6634232	.	-	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_170.2;transcript_id=NA19239_ch_T0000252;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000252;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19239_ch_T0000252:4;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6634155	6634232	.	-	0	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_170.2;transcript_id=NA19239_ch_T0000252;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000252;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:NA19239_ch_T0000252:3;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6634233	6634839	.	-	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_170.2;transcript_id=NA19239_ch_T0000252;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000252;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:NA19239_ch_T0000252:4;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6634840	6635371	.	-	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_170.2;transcript_id=NA19239_ch_T0000252;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000252;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19239_ch_T0000252:5;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6634840	6635325	.	-	0	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_170.2;transcript_id=NA19239_ch_T0000252;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000252;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:NA19239_ch_T0000252:4;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6635323	6635325	.	-	0	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_170.2;transcript_id=NA19239_ch_T0000252;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000252;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=start_codon:NA19239_ch_T0000252;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6632575	6635371	100	-	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_170.3;transcript_id=NA19239_ch_T0000253;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_G0000086;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=NA19239_ch_T0000253;Name=TSPY3
NA19239_chrY	CAT	exon	6632575	6632785	.	-	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_170.3;transcript_id=NA19239_ch_T0000253;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000253;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19239_ch_T0000253:0;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6632786	6633479	.	-	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_170.3;transcript_id=NA19239_ch_T0000253;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000253;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:NA19239_ch_T0000253:0;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6633480	6633561	.	-	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_170.3;transcript_id=NA19239_ch_T0000253;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000253;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19239_ch_T0000253:1;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6633510	6633561	.	-	1	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_170.3;transcript_id=NA19239_ch_T0000253;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000253;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:NA19239_ch_T0000253:0;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6633510	6633512	.	-	0	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_170.3;transcript_id=NA19239_ch_T0000253;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000253;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=stop_codon:NA19239_ch_T0000253;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6633562	6633667	.	-	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_170.3;transcript_id=NA19239_ch_T0000253;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000253;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:NA19239_ch_T0000253:1;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6633668	6633806	.	-	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_170.3;transcript_id=NA19239_ch_T0000253;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000253;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19239_ch_T0000253:2;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6633668	6633806	.	-	2	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_170.3;transcript_id=NA19239_ch_T0000253;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000253;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:NA19239_ch_T0000253:1;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6633807	6633914	.	-	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_170.3;transcript_id=NA19239_ch_T0000253;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000253;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:NA19239_ch_T0000253:2;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6633915	6634026	.	-	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_170.3;transcript_id=NA19239_ch_T0000253;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000253;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19239_ch_T0000253:3;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6633915	6634026	.	-	0	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_170.3;transcript_id=NA19239_ch_T0000253;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000253;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:NA19239_ch_T0000253:2;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6634027	6634154	.	-	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_170.3;transcript_id=NA19239_ch_T0000253;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000253;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:NA19239_ch_T0000253:3;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6634155	6634232	.	-	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_170.3;transcript_id=NA19239_ch_T0000253;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000253;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19239_ch_T0000253:4;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6634155	6634232	.	-	0	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_170.3;transcript_id=NA19239_ch_T0000253;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000253;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:NA19239_ch_T0000253:3;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6634233	6634839	.	-	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_170.3;transcript_id=NA19239_ch_T0000253;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000253;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:NA19239_ch_T0000253:4;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6634840	6635371	.	-	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_170.3;transcript_id=NA19239_ch_T0000253;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000253;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19239_ch_T0000253:5;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6634840	6635325	.	-	0	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_170.3;transcript_id=NA19239_ch_T0000253;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000253;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:NA19239_ch_T0000253:4;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6635323	6635325	.	-	0	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_170.3;transcript_id=NA19239_ch_T0000253;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000253;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=start_codon:NA19239_ch_T0000253;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6632575	6635371	1000	-	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_178.4;transcript_id=NA19239_ch_T0000254;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_G0000086;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=NA19239_ch_T0000254;Name=TSPY3
NA19239_chrY	CAT	exon	6632575	6632785	.	-	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_178.4;transcript_id=NA19239_ch_T0000254;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000254;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=exon:NA19239_ch_T0000254:0;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6632786	6633479	.	-	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_178.4;transcript_id=NA19239_ch_T0000254;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000254;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=intron:NA19239_ch_T0000254:0;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6633480	6633572	.	-	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_178.4;transcript_id=NA19239_ch_T0000254;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000254;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=exon:NA19239_ch_T0000254:1;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6633573	6633667	.	-	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_178.4;transcript_id=NA19239_ch_T0000254;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000254;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=intron:NA19239_ch_T0000254:1;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6633668	6633806	.	-	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_178.4;transcript_id=NA19239_ch_T0000254;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000254;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=exon:NA19239_ch_T0000254:2;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6633807	6633914	.	-	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_178.4;transcript_id=NA19239_ch_T0000254;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000254;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=intron:NA19239_ch_T0000254:2;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6633915	6634026	.	-	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_178.4;transcript_id=NA19239_ch_T0000254;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000254;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=exon:NA19239_ch_T0000254:3;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6634027	6634154	.	-	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_178.4;transcript_id=NA19239_ch_T0000254;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000254;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=intron:NA19239_ch_T0000254:3;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6634155	6634232	.	-	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_178.4;transcript_id=NA19239_ch_T0000254;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000254;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=exon:NA19239_ch_T0000254:4;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6634233	6634839	.	-	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_178.4;transcript_id=NA19239_ch_T0000254;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000254;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=intron:NA19239_ch_T0000254:4;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6634840	6635371	.	-	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_178.4;transcript_id=NA19239_ch_T0000254;gene_id=NA19239_ch_G0000086;Parent=NA19239_ch_T0000254;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=exon:NA19239_ch_T0000254:5;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6637984	6643595	.	+	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_199;alternative_source_transcripts=hg002_chrY_paternal_177.1,hg002_chrY_paternal_169.1;gene_id=NA19239_ch_G0000087;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=NA19239_ch_G0000087;Name=FAM197Y3
NA19239_chrY	CAT	transcript	6637984	6643595	1000	+	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_177.1,hg002_chrY_paternal_169.1;transcript_id=NA19239_ch_T0000255;gene_id=NA19239_ch_G0000087;Parent=NA19239_ch_G0000087;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=NA19239_ch_T0000255;Name=FAM197Y3
NA19239_chrY	CAT	exon	6637984	6638085	.	+	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_177.1,hg002_chrY_paternal_169.1;transcript_id=NA19239_ch_T0000255;gene_id=NA19239_ch_G0000087;Parent=NA19239_ch_T0000255;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=exon:NA19239_ch_T0000255:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6638086	6638171	.	+	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_177.1,hg002_chrY_paternal_169.1;transcript_id=NA19239_ch_T0000255;gene_id=NA19239_ch_G0000087;Parent=NA19239_ch_T0000255;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=intron:NA19239_ch_T0000255:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6638172	6638317	.	+	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_177.1,hg002_chrY_paternal_169.1;transcript_id=NA19239_ch_T0000255;gene_id=NA19239_ch_G0000087;Parent=NA19239_ch_T0000255;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=exon:NA19239_ch_T0000255:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6638318	6639825	.	+	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_177.1,hg002_chrY_paternal_169.1;transcript_id=NA19239_ch_T0000255;gene_id=NA19239_ch_G0000087;Parent=NA19239_ch_T0000255;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=intron:NA19239_ch_T0000255:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6639826	6639984	.	+	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_177.1,hg002_chrY_paternal_169.1;transcript_id=NA19239_ch_T0000255;gene_id=NA19239_ch_G0000087;Parent=NA19239_ch_T0000255;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=exon:NA19239_ch_T0000255:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6639985	6643535	.	+	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_177.1,hg002_chrY_paternal_169.1;transcript_id=NA19239_ch_T0000255;gene_id=NA19239_ch_G0000087;Parent=NA19239_ch_T0000255;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=intron:NA19239_ch_T0000255:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6643536	6643595	.	+	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_177.1,hg002_chrY_paternal_169.1;transcript_id=NA19239_ch_T0000255;gene_id=NA19239_ch_G0000087;Parent=NA19239_ch_T0000255;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=exon:NA19239_ch_T0000255:3;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6652864	6655678	.	-	.	source_gene_common_name=TSPY3;source_gene=hg002_chrY_paternal_176;alternative_source_transcripts=hg002_chrY_paternal_168.3;gene_id=NA19239_ch_G0000088;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=augTM,transMap;ID=NA19239_ch_G0000088;Name=TSPY3
NA19239_chrY	CAT	transcript	6652864	6655678	1000	-	.	source_transcript=hg002_chrY_paternal_176.3;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.3;transcript_score=299.827;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000256;gene_id=NA19239_ch_G0000088;Parent=NA19239_ch_G0000088;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=NA19239_ch_T0000256;Name=TSPY3
NA19239_chrY	CAT	exon	6652864	6653074	.	-	.	source_transcript=hg002_chrY_paternal_176.3;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000256;gene_id=NA19239_ch_G0000088;Parent=NA19239_ch_T0000256;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:NA19239_ch_T0000256:0;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6653075	6653768	.	-	.	source_transcript=hg002_chrY_paternal_176.3;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000256;gene_id=NA19239_ch_G0000088;Parent=NA19239_ch_T0000256;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=intron:NA19239_ch_T0000256:0;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6653769	6653850	.	-	.	source_transcript=hg002_chrY_paternal_176.3;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000256;gene_id=NA19239_ch_G0000088;Parent=NA19239_ch_T0000256;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:NA19239_ch_T0000256:1;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6653799	6653850	.	-	1	source_transcript=hg002_chrY_paternal_176.3;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000256;gene_id=NA19239_ch_G0000088;Parent=NA19239_ch_T0000256;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=CDS:NA19239_ch_T0000256:0;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6653799	6653801	.	-	0	source_transcript=hg002_chrY_paternal_176.3;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000256;gene_id=NA19239_ch_G0000088;Parent=NA19239_ch_T0000256;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=stop_codon:NA19239_ch_T0000256;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6653851	6653956	.	-	.	source_transcript=hg002_chrY_paternal_176.3;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000256;gene_id=NA19239_ch_G0000088;Parent=NA19239_ch_T0000256;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=intron:NA19239_ch_T0000256:1;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6653957	6654095	.	-	.	source_transcript=hg002_chrY_paternal_176.3;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000256;gene_id=NA19239_ch_G0000088;Parent=NA19239_ch_T0000256;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:NA19239_ch_T0000256:2;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6653957	6654095	.	-	2	source_transcript=hg002_chrY_paternal_176.3;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000256;gene_id=NA19239_ch_G0000088;Parent=NA19239_ch_T0000256;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=CDS:NA19239_ch_T0000256:1;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6654096	6654203	.	-	.	source_transcript=hg002_chrY_paternal_176.3;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000256;gene_id=NA19239_ch_G0000088;Parent=NA19239_ch_T0000256;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=intron:NA19239_ch_T0000256:2;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6654204	6654315	.	-	.	source_transcript=hg002_chrY_paternal_176.3;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000256;gene_id=NA19239_ch_G0000088;Parent=NA19239_ch_T0000256;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:NA19239_ch_T0000256:3;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6654204	6654315	.	-	0	source_transcript=hg002_chrY_paternal_176.3;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000256;gene_id=NA19239_ch_G0000088;Parent=NA19239_ch_T0000256;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=CDS:NA19239_ch_T0000256:2;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6654316	6654443	.	-	.	source_transcript=hg002_chrY_paternal_176.3;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000256;gene_id=NA19239_ch_G0000088;Parent=NA19239_ch_T0000256;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=intron:NA19239_ch_T0000256:3;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6654444	6654521	.	-	.	source_transcript=hg002_chrY_paternal_176.3;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000256;gene_id=NA19239_ch_G0000088;Parent=NA19239_ch_T0000256;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:NA19239_ch_T0000256:4;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6654444	6654521	.	-	0	source_transcript=hg002_chrY_paternal_176.3;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000256;gene_id=NA19239_ch_G0000088;Parent=NA19239_ch_T0000256;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=CDS:NA19239_ch_T0000256:3;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6654522	6655128	.	-	.	source_transcript=hg002_chrY_paternal_176.3;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000256;gene_id=NA19239_ch_G0000088;Parent=NA19239_ch_T0000256;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=intron:NA19239_ch_T0000256:4;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6655129	6655678	.	-	.	source_transcript=hg002_chrY_paternal_176.3;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000256;gene_id=NA19239_ch_G0000088;Parent=NA19239_ch_T0000256;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:NA19239_ch_T0000256:5;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6655129	6655632	.	-	0	source_transcript=hg002_chrY_paternal_176.3;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000256;gene_id=NA19239_ch_G0000088;Parent=NA19239_ch_T0000256;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=CDS:NA19239_ch_T0000256:4;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6655630	6655632	.	-	0	source_transcript=hg002_chrY_paternal_176.3;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_168.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000256;gene_id=NA19239_ch_G0000088;Parent=NA19239_ch_T0000256;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=start_codon:NA19239_ch_T0000256;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6652864	6655678	1000	-	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=299.828;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_168.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000257;gene_id=NA19239_ch_G0000088;Parent=NA19239_ch_G0000088;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=NA19239_ch_T0000257;Name=TSPY3
NA19239_chrY	CAT	exon	6652864	6653074	.	-	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_168.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000257;gene_id=NA19239_ch_G0000088;Parent=NA19239_ch_T0000257;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:NA19239_ch_T0000257:0;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6653075	6653768	.	-	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_168.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000257;gene_id=NA19239_ch_G0000088;Parent=NA19239_ch_T0000257;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=intron:NA19239_ch_T0000257:0;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6653769	6653861	.	-	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_168.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000257;gene_id=NA19239_ch_G0000088;Parent=NA19239_ch_T0000257;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:NA19239_ch_T0000257:1;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6653862	6653956	.	-	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_168.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000257;gene_id=NA19239_ch_G0000088;Parent=NA19239_ch_T0000257;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=intron:NA19239_ch_T0000257:1;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6653957	6654095	.	-	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_168.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000257;gene_id=NA19239_ch_G0000088;Parent=NA19239_ch_T0000257;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:NA19239_ch_T0000257:2;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6654096	6654203	.	-	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_168.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000257;gene_id=NA19239_ch_G0000088;Parent=NA19239_ch_T0000257;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=intron:NA19239_ch_T0000257:2;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6654204	6654315	.	-	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_168.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000257;gene_id=NA19239_ch_G0000088;Parent=NA19239_ch_T0000257;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:NA19239_ch_T0000257:3;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6654316	6654443	.	-	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_168.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000257;gene_id=NA19239_ch_G0000088;Parent=NA19239_ch_T0000257;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=intron:NA19239_ch_T0000257:3;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6654444	6654521	.	-	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_168.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000257;gene_id=NA19239_ch_G0000088;Parent=NA19239_ch_T0000257;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:NA19239_ch_T0000257:4;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6654522	6655128	.	-	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_168.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000257;gene_id=NA19239_ch_G0000088;Parent=NA19239_ch_T0000257;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=intron:NA19239_ch_T0000257:4;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6655129	6655678	.	-	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_168.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000257;gene_id=NA19239_ch_G0000088;Parent=NA19239_ch_T0000257;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:NA19239_ch_T0000257:5;Name=TSPY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6658202	6663886	.	+	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_209;alternative_source_transcripts=hg002_chrY_paternal_175.1;gene_id=NA19239_ch_G0000089;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=NA19239_ch_G0000089;Name=FAM197Y2
NA19239_chrY	CAT	transcript	6658202	6663886	1000	+	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1;transcript_id=NA19239_ch_T0000258;gene_id=NA19239_ch_G0000089;Parent=NA19239_ch_G0000089;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=NA19239_ch_T0000258;Name=FAM197Y2
NA19239_chrY	CAT	exon	6658202	6658392	.	+	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1;transcript_id=NA19239_ch_T0000258;gene_id=NA19239_ch_G0000089;Parent=NA19239_ch_T0000258;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000258:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6658393	6658478	.	+	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1;transcript_id=NA19239_ch_T0000258;gene_id=NA19239_ch_G0000089;Parent=NA19239_ch_T0000258;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000258:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6658479	6658624	.	+	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1;transcript_id=NA19239_ch_T0000258;gene_id=NA19239_ch_G0000089;Parent=NA19239_ch_T0000258;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000258:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6658625	6660118	.	+	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1;transcript_id=NA19239_ch_T0000258;gene_id=NA19239_ch_G0000089;Parent=NA19239_ch_T0000258;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000258:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6660119	6660277	.	+	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1;transcript_id=NA19239_ch_T0000258;gene_id=NA19239_ch_G0000089;Parent=NA19239_ch_T0000258;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000258:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6660278	6663826	.	+	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1;transcript_id=NA19239_ch_T0000258;gene_id=NA19239_ch_G0000089;Parent=NA19239_ch_T0000258;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000258:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6663827	6663886	.	+	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1;transcript_id=NA19239_ch_T0000258;gene_id=NA19239_ch_G0000089;Parent=NA19239_ch_T0000258;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000258:3;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6673165	6675961	.	-	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_166;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_166.1;gene_id=NA19239_ch_G0000090;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=NA19239_ch_G0000090;Name=TSPY10
NA19239_chrY	CAT	transcript	6673165	6675961	100	-	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_166.1;transcript_id=NA19239_ch_T0000259;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_G0000090;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=NA19239_ch_T0000259;Name=TSPY10
NA19239_chrY	CAT	exon	6673165	6673375	.	-	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_166.1;transcript_id=NA19239_ch_T0000259;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000259:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6673353	6673375	.	-	2	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_166.1;transcript_id=NA19239_ch_T0000259;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000259:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6673353	6673355	.	-	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_166.1;transcript_id=NA19239_ch_T0000259;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=stop_codon:NA19239_ch_T0000259;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6673376	6674069	.	-	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_166.1;transcript_id=NA19239_ch_T0000259;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000259:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6674070	6674151	.	-	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_166.1;transcript_id=NA19239_ch_T0000259;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000259:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6674070	6674151	.	-	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_166.1;transcript_id=NA19239_ch_T0000259;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000259:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6674152	6674257	.	-	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_166.1;transcript_id=NA19239_ch_T0000259;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000259:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6674258	6674403	.	-	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_166.1;transcript_id=NA19239_ch_T0000259;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000259:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6674258	6674403	.	-	2	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_166.1;transcript_id=NA19239_ch_T0000259;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000259:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6674404	6674504	.	-	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_166.1;transcript_id=NA19239_ch_T0000259;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000259:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6674505	6674616	.	-	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_166.1;transcript_id=NA19239_ch_T0000259;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000259:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6674505	6674616	.	-	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_166.1;transcript_id=NA19239_ch_T0000259;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000259:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6674617	6674744	.	-	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_166.1;transcript_id=NA19239_ch_T0000259;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000259:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6674745	6674822	.	-	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_166.1;transcript_id=NA19239_ch_T0000259;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000259:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6674745	6674822	.	-	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_166.1;transcript_id=NA19239_ch_T0000259;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000259:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6674823	6675429	.	-	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_166.1;transcript_id=NA19239_ch_T0000259;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000259:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6675430	6675961	.	-	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_166.1;transcript_id=NA19239_ch_T0000259;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000259:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6675430	6675915	.	-	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_166.1;transcript_id=NA19239_ch_T0000259;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000259:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6675913	6675915	.	-	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_166.1;transcript_id=NA19239_ch_T0000259;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=start_codon:NA19239_ch_T0000259;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6673165	6675961	100	-	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_166.2;transcript_id=NA19239_ch_T0000260;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_G0000090;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=NA19239_ch_T0000260;Name=TSPY10
NA19239_chrY	CAT	exon	6673165	6673375	.	-	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_166.2;transcript_id=NA19239_ch_T0000260;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000260;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000260:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6673376	6674069	.	-	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_166.2;transcript_id=NA19239_ch_T0000260;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000260;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000260:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6674070	6674162	.	-	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_166.2;transcript_id=NA19239_ch_T0000260;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000260;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000260:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6674100	6674162	.	-	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_166.2;transcript_id=NA19239_ch_T0000260;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000260;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000260:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6674100	6674102	.	-	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_166.2;transcript_id=NA19239_ch_T0000260;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000260;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=stop_codon:NA19239_ch_T0000260;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6674163	6674257	.	-	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_166.2;transcript_id=NA19239_ch_T0000260;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000260;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000260:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6674258	6674403	.	-	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_166.2;transcript_id=NA19239_ch_T0000260;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000260;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000260:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6674258	6674403	.	-	2	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_166.2;transcript_id=NA19239_ch_T0000260;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000260;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000260:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6674404	6674504	.	-	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_166.2;transcript_id=NA19239_ch_T0000260;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000260;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000260:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6674505	6674616	.	-	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_166.2;transcript_id=NA19239_ch_T0000260;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000260;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000260:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6674505	6674616	.	-	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_166.2;transcript_id=NA19239_ch_T0000260;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000260;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000260:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6674617	6674744	.	-	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_166.2;transcript_id=NA19239_ch_T0000260;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000260;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000260:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6674745	6674822	.	-	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_166.2;transcript_id=NA19239_ch_T0000260;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000260;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000260:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6674745	6674822	.	-	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_166.2;transcript_id=NA19239_ch_T0000260;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000260;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000260:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6674823	6675429	.	-	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_166.2;transcript_id=NA19239_ch_T0000260;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000260;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000260:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6675430	6675961	.	-	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_166.2;transcript_id=NA19239_ch_T0000260;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000260;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000260:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6675430	6675915	.	-	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_166.2;transcript_id=NA19239_ch_T0000260;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000260;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000260:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6675913	6675915	.	-	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_166.2;transcript_id=NA19239_ch_T0000260;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000260;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=start_codon:NA19239_ch_T0000260;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6673165	6675961	100	-	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_166.3;transcript_id=NA19239_ch_T0000261;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_G0000090;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=NA19239_ch_T0000261;Name=TSPY10
NA19239_chrY	CAT	exon	6673165	6673375	.	-	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_166.3;transcript_id=NA19239_ch_T0000261;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000261;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000261:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6673376	6674069	.	-	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_166.3;transcript_id=NA19239_ch_T0000261;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000261;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000261:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6674070	6674151	.	-	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_166.3;transcript_id=NA19239_ch_T0000261;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000261;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000261:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6674100	6674151	.	-	1	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_166.3;transcript_id=NA19239_ch_T0000261;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000261;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000261:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6674100	6674102	.	-	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_166.3;transcript_id=NA19239_ch_T0000261;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000261;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=stop_codon:NA19239_ch_T0000261;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6674152	6674257	.	-	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_166.3;transcript_id=NA19239_ch_T0000261;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000261;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000261:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6674258	6674396	.	-	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_166.3;transcript_id=NA19239_ch_T0000261;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000261;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000261:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6674258	6674396	.	-	2	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_166.3;transcript_id=NA19239_ch_T0000261;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000261;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000261:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6674397	6674504	.	-	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_166.3;transcript_id=NA19239_ch_T0000261;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000261;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000261:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6674505	6674616	.	-	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_166.3;transcript_id=NA19239_ch_T0000261;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000261;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000261:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6674505	6674616	.	-	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_166.3;transcript_id=NA19239_ch_T0000261;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000261;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000261:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6674617	6674744	.	-	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_166.3;transcript_id=NA19239_ch_T0000261;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000261;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000261:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6674745	6674822	.	-	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_166.3;transcript_id=NA19239_ch_T0000261;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000261;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000261:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6674745	6674822	.	-	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_166.3;transcript_id=NA19239_ch_T0000261;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000261;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000261:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6674823	6675429	.	-	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_166.3;transcript_id=NA19239_ch_T0000261;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000261;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000261:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6675430	6675961	.	-	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_166.3;transcript_id=NA19239_ch_T0000261;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000261;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000261:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6675430	6675915	.	-	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_166.3;transcript_id=NA19239_ch_T0000261;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000261;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000261:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6675913	6675915	.	-	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_166.3;transcript_id=NA19239_ch_T0000261;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000261;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=start_codon:NA19239_ch_T0000261;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6673165	6675961	1000	-	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_166.4;transcript_id=NA19239_ch_T0000262;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_G0000090;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=NA19239_ch_T0000262;Name=TSPY10
NA19239_chrY	CAT	exon	6673165	6673375	.	-	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_166.4;transcript_id=NA19239_ch_T0000262;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000262;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000262:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6673376	6674069	.	-	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_166.4;transcript_id=NA19239_ch_T0000262;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000262;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000262:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6674070	6674162	.	-	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_166.4;transcript_id=NA19239_ch_T0000262;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000262;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000262:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6674163	6674257	.	-	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_166.4;transcript_id=NA19239_ch_T0000262;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000262;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000262:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6674258	6674396	.	-	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_166.4;transcript_id=NA19239_ch_T0000262;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000262;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000262:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6674397	6674504	.	-	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_166.4;transcript_id=NA19239_ch_T0000262;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000262;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000262:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6674505	6674616	.	-	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_166.4;transcript_id=NA19239_ch_T0000262;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000262;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000262:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6674617	6674744	.	-	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_166.4;transcript_id=NA19239_ch_T0000262;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000262;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000262:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6674745	6674822	.	-	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_166.4;transcript_id=NA19239_ch_T0000262;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000262;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000262:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6674823	6675429	.	-	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_166.4;transcript_id=NA19239_ch_T0000262;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000262;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000262:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6675430	6675961	.	-	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_166.4;transcript_id=NA19239_ch_T0000262;gene_id=NA19239_ch_G0000090;Parent=NA19239_ch_T0000262;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000262:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6678574	6684179	.	+	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_167;gene_id=NA19239_ch_G0000091;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=NA19239_ch_G0000091;Name=FAM197Y3
NA19239_chrY	CAT	transcript	6678574	6684179	1000	+	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA19239_ch_T0000263;gene_id=NA19239_ch_G0000091;Parent=NA19239_ch_G0000091;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=NA19239_ch_T0000263;Name=FAM197Y3
NA19239_chrY	CAT	exon	6678574	6678675	.	+	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA19239_ch_T0000263;gene_id=NA19239_ch_G0000091;Parent=NA19239_ch_T0000263;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=exon:NA19239_ch_T0000263:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6678676	6678761	.	+	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA19239_ch_T0000263;gene_id=NA19239_ch_G0000091;Parent=NA19239_ch_T0000263;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=intron:NA19239_ch_T0000263:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6678762	6678907	.	+	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA19239_ch_T0000263;gene_id=NA19239_ch_G0000091;Parent=NA19239_ch_T0000263;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=exon:NA19239_ch_T0000263:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6678908	6680409	.	+	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA19239_ch_T0000263;gene_id=NA19239_ch_G0000091;Parent=NA19239_ch_T0000263;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=intron:NA19239_ch_T0000263:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6680410	6680568	.	+	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA19239_ch_T0000263;gene_id=NA19239_ch_G0000091;Parent=NA19239_ch_T0000263;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=exon:NA19239_ch_T0000263:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6680569	6684119	.	+	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA19239_ch_T0000263;gene_id=NA19239_ch_G0000091;Parent=NA19239_ch_T0000263;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=intron:NA19239_ch_T0000263:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6684120	6684179	.	+	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA19239_ch_T0000263;gene_id=NA19239_ch_G0000091;Parent=NA19239_ch_T0000263;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=exon:NA19239_ch_T0000263:3;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6693444	6696240	.	-	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_172;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_164.1;gene_id=NA19239_ch_G0000092;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff,augTM;ID=NA19239_ch_G0000092;Name=TSPY10
NA19239_chrY	CAT	transcript	6693444	6696240	100	-	.	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000264;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_G0000092;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=NA19239_ch_T0000264;Name=TSPY10
NA19239_chrY	CAT	exon	6693444	6693654	.	-	.	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000264;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000264;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000264:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6693632	6693654	.	-	2	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000264;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000264;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000264:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6693632	6693634	.	-	0	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000264;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000264;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=stop_codon:NA19239_ch_T0000264;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6693655	6694348	.	-	.	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000264;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000264;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000264:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6694349	6694430	.	-	.	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000264;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000264;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000264:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6694349	6694430	.	-	0	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000264;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000264;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000264:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6694431	6694536	.	-	.	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000264;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000264;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000264:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6694537	6694682	.	-	.	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000264;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000264;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000264:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6694537	6694682	.	-	2	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000264;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000264;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000264:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6694683	6694783	.	-	.	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000264;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000264;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000264:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6694784	6694895	.	-	.	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000264;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000264;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000264:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6694784	6694895	.	-	0	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000264;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000264;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000264:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6694896	6695023	.	-	.	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000264;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000264;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000264:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6695024	6695101	.	-	.	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000264;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000264;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000264:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6695024	6695101	.	-	0	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000264;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000264;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000264:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6695102	6695708	.	-	.	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000264;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000264;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000264:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6695709	6696240	.	-	.	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000264;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000264;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000264:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6695709	6696194	.	-	0	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000264;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000264;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000264:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6696192	6696194	.	-	0	source_transcript=hg002_chrY_paternal_172.1;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000264;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000264;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=start_codon:NA19239_ch_T0000264;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6693444	6696240	100	-	.	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000265;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_G0000092;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=NA19239_ch_T0000265;Name=TSPY10
NA19239_chrY	CAT	exon	6693444	6693654	.	-	.	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000265;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000265;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000265:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6693655	6694348	.	-	.	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000265;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000265;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000265:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6694349	6694441	.	-	.	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000265;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000265;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000265:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6694379	6694441	.	-	0	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000265;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000265;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000265:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6694379	6694381	.	-	0	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000265;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000265;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=stop_codon:NA19239_ch_T0000265;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6694442	6694536	.	-	.	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000265;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000265;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000265:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6694537	6694682	.	-	.	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000265;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000265;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000265:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6694537	6694682	.	-	2	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000265;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000265;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000265:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6694683	6694783	.	-	.	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000265;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000265;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000265:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6694784	6694895	.	-	.	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000265;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000265;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000265:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6694784	6694895	.	-	0	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000265;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000265;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000265:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6694896	6695023	.	-	.	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000265;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000265;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000265:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6695024	6695101	.	-	.	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000265;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000265;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000265:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6695024	6695101	.	-	0	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000265;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000265;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000265:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6695102	6695708	.	-	.	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000265;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000265;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000265:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6695709	6696240	.	-	.	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000265;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000265;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000265:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6695709	6696194	.	-	0	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000265;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000265;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000265:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6696192	6696194	.	-	0	source_transcript=hg002_chrY_paternal_172.2;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000265;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000265;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=start_codon:NA19239_ch_T0000265;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6693444	6696240	100	-	.	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000266;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_G0000092;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=NA19239_ch_T0000266;Name=TSPY10
NA19239_chrY	CAT	exon	6693444	6693654	.	-	.	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000266;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000266;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000266:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6693655	6694348	.	-	.	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000266;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000266;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000266:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6694349	6694430	.	-	.	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000266;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000266;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000266:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6694379	6694430	.	-	1	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000266;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000266;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000266:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6694379	6694381	.	-	0	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000266;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000266;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=stop_codon:NA19239_ch_T0000266;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6694431	6694536	.	-	.	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000266;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000266;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000266:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6694537	6694675	.	-	.	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000266;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000266;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000266:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6694537	6694675	.	-	2	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000266;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000266;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000266:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6694676	6694783	.	-	.	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000266;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000266;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000266:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6694784	6694895	.	-	.	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000266;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000266;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000266:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6694784	6694895	.	-	0	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000266;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000266;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000266:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6694896	6695023	.	-	.	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000266;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000266;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000266:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6695024	6695101	.	-	.	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000266;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000266;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000266:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6695024	6695101	.	-	0	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000266;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000266;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000266:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6695102	6695708	.	-	.	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000266;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000266;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000266:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6695709	6696240	.	-	.	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000266;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000266;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000266:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6695709	6696194	.	-	0	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000266;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000266;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000266:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6696192	6696194	.	-	0	source_transcript=hg002_chrY_paternal_172.3;source_transcript_name=hg002_chrY_paternal_172.4;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_172.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000266;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000266;transcript_name=hg002_chrY_paternal_172.4;gene_name=TSPY10;ID=start_codon:NA19239_ch_T0000266;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6693444	6696240	1000	-	.	source_transcript=hg002_chrY_paternal_172.4;source_transcript_name=hg002_chrY_paternal_172.1;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_172.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_164.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000267;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_G0000092;transcript_name=hg002_chrY_paternal_172.1;gene_name=TSPY10;ID=NA19239_ch_T0000267;Name=TSPY10
NA19239_chrY	CAT	exon	6693444	6693654	.	-	.	source_transcript=hg002_chrY_paternal_172.4;source_transcript_name=hg002_chrY_paternal_172.1;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_172.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_164.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000267;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000267;transcript_name=hg002_chrY_paternal_172.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000267:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6693655	6694348	.	-	.	source_transcript=hg002_chrY_paternal_172.4;source_transcript_name=hg002_chrY_paternal_172.1;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_172.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_164.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000267;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000267;transcript_name=hg002_chrY_paternal_172.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000267:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6694349	6694441	.	-	.	source_transcript=hg002_chrY_paternal_172.4;source_transcript_name=hg002_chrY_paternal_172.1;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_172.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_164.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000267;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000267;transcript_name=hg002_chrY_paternal_172.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000267:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6694442	6694536	.	-	.	source_transcript=hg002_chrY_paternal_172.4;source_transcript_name=hg002_chrY_paternal_172.1;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_172.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_164.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000267;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000267;transcript_name=hg002_chrY_paternal_172.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000267:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6694537	6694675	.	-	.	source_transcript=hg002_chrY_paternal_172.4;source_transcript_name=hg002_chrY_paternal_172.1;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_172.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_164.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000267;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000267;transcript_name=hg002_chrY_paternal_172.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000267:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6694676	6694783	.	-	.	source_transcript=hg002_chrY_paternal_172.4;source_transcript_name=hg002_chrY_paternal_172.1;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_172.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_164.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000267;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000267;transcript_name=hg002_chrY_paternal_172.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000267:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6694784	6694895	.	-	.	source_transcript=hg002_chrY_paternal_172.4;source_transcript_name=hg002_chrY_paternal_172.1;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_172.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_164.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000267;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000267;transcript_name=hg002_chrY_paternal_172.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000267:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6694896	6695023	.	-	.	source_transcript=hg002_chrY_paternal_172.4;source_transcript_name=hg002_chrY_paternal_172.1;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_172.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_164.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000267;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000267;transcript_name=hg002_chrY_paternal_172.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000267:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6695024	6695101	.	-	.	source_transcript=hg002_chrY_paternal_172.4;source_transcript_name=hg002_chrY_paternal_172.1;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_172.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_164.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000267;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000267;transcript_name=hg002_chrY_paternal_172.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000267:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6695102	6695708	.	-	.	source_transcript=hg002_chrY_paternal_172.4;source_transcript_name=hg002_chrY_paternal_172.1;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_172.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_164.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000267;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000267;transcript_name=hg002_chrY_paternal_172.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000267:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6695709	6696240	.	-	.	source_transcript=hg002_chrY_paternal_172.4;source_transcript_name=hg002_chrY_paternal_172.1;source_gene=hg002_chrY_paternal_172;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_172;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_172.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_172.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_164.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000267;gene_id=NA19239_ch_G0000092;Parent=NA19239_ch_T0000267;transcript_name=hg002_chrY_paternal_172.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000267:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6698764	6704450	.	+	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_173;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_163.1;gene_id=NA19239_ch_G0000093;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=NA19239_ch_G0000093;Name=FAM197Y2
NA19239_chrY	CAT	transcript	6698764	6704450	1000	+	.	source_transcript=hg002_chrY_paternal_173.1;source_transcript_name=hg002_chrY_paternal_173.1;source_gene=hg002_chrY_paternal_173;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_173;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_173.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_173.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_163.1;transcript_id=NA19239_ch_T0000268;gene_id=NA19239_ch_G0000093;Parent=NA19239_ch_G0000093;transcript_name=hg002_chrY_paternal_173.1;gene_name=FAM197Y2;ID=NA19239_ch_T0000268;Name=FAM197Y2
NA19239_chrY	CAT	exon	6698764	6698954	.	+	.	source_transcript=hg002_chrY_paternal_173.1;source_transcript_name=hg002_chrY_paternal_173.1;source_gene=hg002_chrY_paternal_173;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_173;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_173.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_173.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_163.1;transcript_id=NA19239_ch_T0000268;gene_id=NA19239_ch_G0000093;Parent=NA19239_ch_T0000268;transcript_name=hg002_chrY_paternal_173.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000268:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6698955	6699040	.	+	.	source_transcript=hg002_chrY_paternal_173.1;source_transcript_name=hg002_chrY_paternal_173.1;source_gene=hg002_chrY_paternal_173;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_173;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_173.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_173.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_163.1;transcript_id=NA19239_ch_T0000268;gene_id=NA19239_ch_G0000093;Parent=NA19239_ch_T0000268;transcript_name=hg002_chrY_paternal_173.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000268:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6699041	6699186	.	+	.	source_transcript=hg002_chrY_paternal_173.1;source_transcript_name=hg002_chrY_paternal_173.1;source_gene=hg002_chrY_paternal_173;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_173;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_173.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_173.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_163.1;transcript_id=NA19239_ch_T0000268;gene_id=NA19239_ch_G0000093;Parent=NA19239_ch_T0000268;transcript_name=hg002_chrY_paternal_173.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000268:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6699187	6700682	.	+	.	source_transcript=hg002_chrY_paternal_173.1;source_transcript_name=hg002_chrY_paternal_173.1;source_gene=hg002_chrY_paternal_173;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_173;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_173.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_173.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_163.1;transcript_id=NA19239_ch_T0000268;gene_id=NA19239_ch_G0000093;Parent=NA19239_ch_T0000268;transcript_name=hg002_chrY_paternal_173.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000268:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6700683	6700841	.	+	.	source_transcript=hg002_chrY_paternal_173.1;source_transcript_name=hg002_chrY_paternal_173.1;source_gene=hg002_chrY_paternal_173;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_173;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_173.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_173.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_163.1;transcript_id=NA19239_ch_T0000268;gene_id=NA19239_ch_G0000093;Parent=NA19239_ch_T0000268;transcript_name=hg002_chrY_paternal_173.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000268:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6700842	6704390	.	+	.	source_transcript=hg002_chrY_paternal_173.1;source_transcript_name=hg002_chrY_paternal_173.1;source_gene=hg002_chrY_paternal_173;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_173;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_173.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_173.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_163.1;transcript_id=NA19239_ch_T0000268;gene_id=NA19239_ch_G0000093;Parent=NA19239_ch_T0000268;transcript_name=hg002_chrY_paternal_173.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000268:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6704391	6704450	.	+	.	source_transcript=hg002_chrY_paternal_173.1;source_transcript_name=hg002_chrY_paternal_173.1;source_gene=hg002_chrY_paternal_173;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_173;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_173.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_173.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_163.1;transcript_id=NA19239_ch_T0000268;gene_id=NA19239_ch_G0000093;Parent=NA19239_ch_T0000268;transcript_name=hg002_chrY_paternal_173.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000268:3;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6713711	6716525	.	-	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_170;gene_id=NA19239_ch_G0000094;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=augTM,transMap;ID=NA19239_ch_G0000094;Name=TSPY10
NA19239_chrY	CAT	transcript	6713711	6716525	1000	-	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=299.827;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000269;gene_id=NA19239_ch_G0000094;Parent=NA19239_ch_G0000094;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=NA19239_ch_T0000269;Name=TSPY10
NA19239_chrY	CAT	exon	6713711	6713921	.	-	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000269;gene_id=NA19239_ch_G0000094;Parent=NA19239_ch_T0000269;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000269:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6713922	6714615	.	-	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000269;gene_id=NA19239_ch_G0000094;Parent=NA19239_ch_T0000269;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000269:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6714616	6714697	.	-	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000269;gene_id=NA19239_ch_G0000094;Parent=NA19239_ch_T0000269;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000269:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6714646	6714697	.	-	1	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000269;gene_id=NA19239_ch_G0000094;Parent=NA19239_ch_T0000269;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000269:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6714646	6714648	.	-	0	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000269;gene_id=NA19239_ch_G0000094;Parent=NA19239_ch_T0000269;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=stop_codon:NA19239_ch_T0000269;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6714698	6714803	.	-	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000269;gene_id=NA19239_ch_G0000094;Parent=NA19239_ch_T0000269;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000269:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6714804	6714942	.	-	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000269;gene_id=NA19239_ch_G0000094;Parent=NA19239_ch_T0000269;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000269:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6714804	6714942	.	-	2	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000269;gene_id=NA19239_ch_G0000094;Parent=NA19239_ch_T0000269;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000269:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6714943	6715050	.	-	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000269;gene_id=NA19239_ch_G0000094;Parent=NA19239_ch_T0000269;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000269:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6715051	6715162	.	-	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000269;gene_id=NA19239_ch_G0000094;Parent=NA19239_ch_T0000269;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000269:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6715051	6715162	.	-	0	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000269;gene_id=NA19239_ch_G0000094;Parent=NA19239_ch_T0000269;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000269:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6715163	6715290	.	-	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000269;gene_id=NA19239_ch_G0000094;Parent=NA19239_ch_T0000269;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000269:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6715291	6715368	.	-	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000269;gene_id=NA19239_ch_G0000094;Parent=NA19239_ch_T0000269;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000269:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6715291	6715368	.	-	0	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000269;gene_id=NA19239_ch_G0000094;Parent=NA19239_ch_T0000269;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000269:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6715369	6715975	.	-	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000269;gene_id=NA19239_ch_G0000094;Parent=NA19239_ch_T0000269;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000269:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6715976	6716525	.	-	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000269;gene_id=NA19239_ch_G0000094;Parent=NA19239_ch_T0000269;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000269:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6715976	6716479	.	-	0	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000269;gene_id=NA19239_ch_G0000094;Parent=NA19239_ch_T0000269;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000269:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6716477	6716479	.	-	0	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000269;gene_id=NA19239_ch_G0000094;Parent=NA19239_ch_T0000269;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=start_codon:NA19239_ch_T0000269;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6713711	6716525	1000	-	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=299.828;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000270;gene_id=NA19239_ch_G0000094;Parent=NA19239_ch_G0000094;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=NA19239_ch_T0000270;Name=TSPY10
NA19239_chrY	CAT	exon	6713711	6713921	.	-	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000270;gene_id=NA19239_ch_G0000094;Parent=NA19239_ch_T0000270;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000270:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6713922	6714615	.	-	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000270;gene_id=NA19239_ch_G0000094;Parent=NA19239_ch_T0000270;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000270:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6714616	6714708	.	-	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000270;gene_id=NA19239_ch_G0000094;Parent=NA19239_ch_T0000270;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000270:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6714709	6714803	.	-	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000270;gene_id=NA19239_ch_G0000094;Parent=NA19239_ch_T0000270;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000270:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6714804	6714942	.	-	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000270;gene_id=NA19239_ch_G0000094;Parent=NA19239_ch_T0000270;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000270:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6714943	6715050	.	-	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000270;gene_id=NA19239_ch_G0000094;Parent=NA19239_ch_T0000270;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000270:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6715051	6715162	.	-	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000270;gene_id=NA19239_ch_G0000094;Parent=NA19239_ch_T0000270;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000270:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6715163	6715290	.	-	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000270;gene_id=NA19239_ch_G0000094;Parent=NA19239_ch_T0000270;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000270:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6715291	6715368	.	-	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000270;gene_id=NA19239_ch_G0000094;Parent=NA19239_ch_T0000270;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000270:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6715369	6715975	.	-	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000270;gene_id=NA19239_ch_G0000094;Parent=NA19239_ch_T0000270;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000270:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6715976	6716525	.	-	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000270;gene_id=NA19239_ch_G0000094;Parent=NA19239_ch_T0000270;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000270:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6719049	6724738	.	+	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_163;gene_id=NA19239_ch_G0000095;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=NA19239_ch_G0000095;Name=FAM197Y2
NA19239_chrY	CAT	transcript	6719049	6724738	1000	+	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA19239_ch_T0000271;gene_id=NA19239_ch_G0000095;Parent=NA19239_ch_G0000095;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=NA19239_ch_T0000271;Name=FAM197Y2
NA19239_chrY	CAT	exon	6719049	6719239	.	+	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA19239_ch_T0000271;gene_id=NA19239_ch_G0000095;Parent=NA19239_ch_T0000271;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000271:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6719240	6719325	.	+	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA19239_ch_T0000271;gene_id=NA19239_ch_G0000095;Parent=NA19239_ch_T0000271;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000271:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6719326	6719471	.	+	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA19239_ch_T0000271;gene_id=NA19239_ch_G0000095;Parent=NA19239_ch_T0000271;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000271:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6719472	6720969	.	+	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA19239_ch_T0000271;gene_id=NA19239_ch_G0000095;Parent=NA19239_ch_T0000271;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000271:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6720970	6721128	.	+	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA19239_ch_T0000271;gene_id=NA19239_ch_G0000095;Parent=NA19239_ch_T0000271;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000271:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6721129	6724678	.	+	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA19239_ch_T0000271;gene_id=NA19239_ch_G0000095;Parent=NA19239_ch_T0000271;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000271:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6724679	6724738	.	+	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA19239_ch_T0000271;gene_id=NA19239_ch_G0000095;Parent=NA19239_ch_T0000271;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000271:3;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6734049	6736863	.	-	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_216;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_160.1;gene_id=NA19239_ch_G0000096;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=NA19239_ch_G0000096;Name=TSPY4
NA19239_chrY	CAT	transcript	6734049	6736863	100	-	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_160.1;transcript_id=NA19239_ch_T0000272;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_G0000096;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=NA19239_ch_T0000272;Name=TSPY4
NA19239_chrY	CAT	exon	6734049	6734259	.	-	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_160.1;transcript_id=NA19239_ch_T0000272;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000272;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000272:0;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6734237	6734259	.	-	2	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_160.1;transcript_id=NA19239_ch_T0000272;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000272;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000272:0;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6734237	6734239	.	-	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_160.1;transcript_id=NA19239_ch_T0000272;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000272;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=stop_codon:NA19239_ch_T0000272;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6734260	6734953	.	-	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_160.1;transcript_id=NA19239_ch_T0000272;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000272;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000272:0;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6734954	6735035	.	-	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_160.1;transcript_id=NA19239_ch_T0000272;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000272;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000272:1;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6734954	6735035	.	-	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_160.1;transcript_id=NA19239_ch_T0000272;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000272;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000272:1;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6735036	6735141	.	-	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_160.1;transcript_id=NA19239_ch_T0000272;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000272;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000272:1;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6735142	6735287	.	-	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_160.1;transcript_id=NA19239_ch_T0000272;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000272;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000272:2;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6735142	6735287	.	-	2	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_160.1;transcript_id=NA19239_ch_T0000272;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000272;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000272:2;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6735288	6735388	.	-	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_160.1;transcript_id=NA19239_ch_T0000272;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000272;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000272:2;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6735389	6735500	.	-	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_160.1;transcript_id=NA19239_ch_T0000272;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000272;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000272:3;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6735389	6735500	.	-	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_160.1;transcript_id=NA19239_ch_T0000272;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000272;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000272:3;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6735501	6735628	.	-	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_160.1;transcript_id=NA19239_ch_T0000272;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000272;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000272:3;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6735629	6735706	.	-	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_160.1;transcript_id=NA19239_ch_T0000272;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000272;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000272:4;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6735629	6735706	.	-	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_160.1;transcript_id=NA19239_ch_T0000272;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000272;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000272:4;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6735707	6736313	.	-	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_160.1;transcript_id=NA19239_ch_T0000272;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000272;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000272:4;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6736314	6736863	.	-	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_160.1;transcript_id=NA19239_ch_T0000272;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000272;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000272:5;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6736314	6736817	.	-	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_160.1;transcript_id=NA19239_ch_T0000272;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000272;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000272:5;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6736815	6736817	.	-	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_160.1;transcript_id=NA19239_ch_T0000272;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000272;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=start_codon:NA19239_ch_T0000272;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6734049	6736863	100	-	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_160.2;transcript_id=NA19239_ch_T0000273;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_G0000096;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=NA19239_ch_T0000273;Name=TSPY4
NA19239_chrY	CAT	exon	6734049	6734259	.	-	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_160.2;transcript_id=NA19239_ch_T0000273;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000273;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000273:0;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6734260	6734953	.	-	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_160.2;transcript_id=NA19239_ch_T0000273;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000273;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000273:0;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6734954	6735046	.	-	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_160.2;transcript_id=NA19239_ch_T0000273;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000273;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000273:1;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6734984	6735046	.	-	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_160.2;transcript_id=NA19239_ch_T0000273;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000273;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000273:0;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6734984	6734986	.	-	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_160.2;transcript_id=NA19239_ch_T0000273;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000273;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=stop_codon:NA19239_ch_T0000273;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6735047	6735141	.	-	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_160.2;transcript_id=NA19239_ch_T0000273;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000273;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000273:1;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6735142	6735287	.	-	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_160.2;transcript_id=NA19239_ch_T0000273;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000273;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000273:2;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6735142	6735287	.	-	2	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_160.2;transcript_id=NA19239_ch_T0000273;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000273;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000273:1;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6735288	6735388	.	-	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_160.2;transcript_id=NA19239_ch_T0000273;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000273;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000273:2;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6735389	6735500	.	-	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_160.2;transcript_id=NA19239_ch_T0000273;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000273;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000273:3;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6735389	6735500	.	-	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_160.2;transcript_id=NA19239_ch_T0000273;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000273;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000273:2;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6735501	6735628	.	-	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_160.2;transcript_id=NA19239_ch_T0000273;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000273;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000273:3;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6735629	6735706	.	-	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_160.2;transcript_id=NA19239_ch_T0000273;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000273;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000273:4;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6735629	6735706	.	-	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_160.2;transcript_id=NA19239_ch_T0000273;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000273;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000273:3;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6735707	6736313	.	-	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_160.2;transcript_id=NA19239_ch_T0000273;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000273;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000273:4;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6736314	6736863	.	-	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_160.2;transcript_id=NA19239_ch_T0000273;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000273;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000273:5;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6736314	6736817	.	-	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_160.2;transcript_id=NA19239_ch_T0000273;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000273;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000273:4;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6736815	6736817	.	-	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_160.2;transcript_id=NA19239_ch_T0000273;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000273;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=start_codon:NA19239_ch_T0000273;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6734049	6736863	100	-	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_160.3;transcript_id=NA19239_ch_T0000274;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_G0000096;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=NA19239_ch_T0000274;Name=TSPY4
NA19239_chrY	CAT	exon	6734049	6734259	.	-	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_160.3;transcript_id=NA19239_ch_T0000274;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000274;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000274:0;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6734260	6734953	.	-	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_160.3;transcript_id=NA19239_ch_T0000274;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000274;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000274:0;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6734954	6735035	.	-	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_160.3;transcript_id=NA19239_ch_T0000274;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000274;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000274:1;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6734984	6735035	.	-	1	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_160.3;transcript_id=NA19239_ch_T0000274;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000274;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000274:0;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6734984	6734986	.	-	0	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_160.3;transcript_id=NA19239_ch_T0000274;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000274;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=stop_codon:NA19239_ch_T0000274;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6735036	6735141	.	-	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_160.3;transcript_id=NA19239_ch_T0000274;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000274;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000274:1;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6735142	6735280	.	-	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_160.3;transcript_id=NA19239_ch_T0000274;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000274;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000274:2;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6735142	6735280	.	-	2	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_160.3;transcript_id=NA19239_ch_T0000274;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000274;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000274:1;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6735281	6735388	.	-	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_160.3;transcript_id=NA19239_ch_T0000274;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000274;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000274:2;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6735389	6735500	.	-	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_160.3;transcript_id=NA19239_ch_T0000274;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000274;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000274:3;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6735389	6735500	.	-	0	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_160.3;transcript_id=NA19239_ch_T0000274;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000274;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000274:2;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6735501	6735628	.	-	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_160.3;transcript_id=NA19239_ch_T0000274;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000274;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000274:3;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6735629	6735706	.	-	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_160.3;transcript_id=NA19239_ch_T0000274;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000274;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000274:4;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6735629	6735706	.	-	0	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_160.3;transcript_id=NA19239_ch_T0000274;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000274;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000274:3;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6735707	6736313	.	-	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_160.3;transcript_id=NA19239_ch_T0000274;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000274;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000274:4;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6736314	6736863	.	-	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_160.3;transcript_id=NA19239_ch_T0000274;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000274;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000274:5;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6736314	6736817	.	-	0	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_160.3;transcript_id=NA19239_ch_T0000274;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000274;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000274:4;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6736815	6736817	.	-	0	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_160.3;transcript_id=NA19239_ch_T0000274;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000274;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=start_codon:NA19239_ch_T0000274;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6734049	6736863	1000	-	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_160.4;transcript_id=NA19239_ch_T0000275;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_G0000096;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=NA19239_ch_T0000275;Name=TSPY4
NA19239_chrY	CAT	exon	6734049	6734259	.	-	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_160.4;transcript_id=NA19239_ch_T0000275;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000275;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:NA19239_ch_T0000275:0;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6734260	6734953	.	-	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_160.4;transcript_id=NA19239_ch_T0000275;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000275;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=intron:NA19239_ch_T0000275:0;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6734954	6735046	.	-	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_160.4;transcript_id=NA19239_ch_T0000275;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000275;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:NA19239_ch_T0000275:1;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6735047	6735141	.	-	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_160.4;transcript_id=NA19239_ch_T0000275;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000275;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=intron:NA19239_ch_T0000275:1;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6735142	6735280	.	-	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_160.4;transcript_id=NA19239_ch_T0000275;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000275;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:NA19239_ch_T0000275:2;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6735281	6735388	.	-	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_160.4;transcript_id=NA19239_ch_T0000275;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000275;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=intron:NA19239_ch_T0000275:2;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6735389	6735500	.	-	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_160.4;transcript_id=NA19239_ch_T0000275;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000275;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:NA19239_ch_T0000275:3;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6735501	6735628	.	-	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_160.4;transcript_id=NA19239_ch_T0000275;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000275;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=intron:NA19239_ch_T0000275:3;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6735629	6735706	.	-	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_160.4;transcript_id=NA19239_ch_T0000275;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000275;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:NA19239_ch_T0000275:4;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6735707	6736313	.	-	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_160.4;transcript_id=NA19239_ch_T0000275;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000275;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=intron:NA19239_ch_T0000275:4;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6736314	6736863	.	-	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_160.4;transcript_id=NA19239_ch_T0000275;gene_id=NA19239_ch_G0000096;Parent=NA19239_ch_T0000275;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:NA19239_ch_T0000275:5;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6739388	6745082	.	+	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_159;gene_id=NA19239_ch_G0000097;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=transMap,transMap_pairwise;ID=NA19239_ch_G0000097;Name=FAM197Y2
NA19239_chrY	CAT	transcript	6739388	6745082	1000	+	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;AdditionalSources=transMap;transcript_id=NA19239_ch_T0000276;gene_id=NA19239_ch_G0000097;Parent=NA19239_ch_G0000097;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=NA19239_ch_T0000276;Name=FAM197Y2
NA19239_chrY	CAT	exon	6739388	6739578	.	+	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;AdditionalSources=transMap;transcript_id=NA19239_ch_T0000276;gene_id=NA19239_ch_G0000097;Parent=NA19239_ch_T0000276;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000276:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6739579	6739664	.	+	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;AdditionalSources=transMap;transcript_id=NA19239_ch_T0000276;gene_id=NA19239_ch_G0000097;Parent=NA19239_ch_T0000276;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000276:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6739665	6739810	.	+	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;AdditionalSources=transMap;transcript_id=NA19239_ch_T0000276;gene_id=NA19239_ch_G0000097;Parent=NA19239_ch_T0000276;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000276:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6739811	6741314	.	+	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;AdditionalSources=transMap;transcript_id=NA19239_ch_T0000276;gene_id=NA19239_ch_G0000097;Parent=NA19239_ch_T0000276;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000276:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6741315	6741473	.	+	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;AdditionalSources=transMap;transcript_id=NA19239_ch_T0000276;gene_id=NA19239_ch_G0000097;Parent=NA19239_ch_T0000276;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000276:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6741474	6745022	.	+	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;AdditionalSources=transMap;transcript_id=NA19239_ch_T0000276;gene_id=NA19239_ch_G0000097;Parent=NA19239_ch_T0000276;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000276:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6745023	6745082	.	+	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;AdditionalSources=transMap;transcript_id=NA19239_ch_T0000276;gene_id=NA19239_ch_G0000097;Parent=NA19239_ch_T0000276;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000276:3;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6754375	6757171	.	-	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_196;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;gene_id=NA19239_ch_G0000098;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=NA19239_ch_G0000098;Name=TSPY1
NA19239_chrY	CAT	transcript	6754375	6757171	100	-	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;transcript_id=NA19239_ch_T0000277;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_G0000098;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=NA19239_ch_T0000277;Name=TSPY1
NA19239_chrY	CAT	exon	6754375	6754585	.	-	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;transcript_id=NA19239_ch_T0000277;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000277;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000277:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6754586	6755279	.	-	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;transcript_id=NA19239_ch_T0000277;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000277;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000277:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6755280	6755372	.	-	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;transcript_id=NA19239_ch_T0000277;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000277;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000277:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6755310	6755372	.	-	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;transcript_id=NA19239_ch_T0000277;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000277;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000277:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6755310	6755312	.	-	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;transcript_id=NA19239_ch_T0000277;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000277;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=stop_codon:NA19239_ch_T0000277;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6755373	6755467	.	-	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;transcript_id=NA19239_ch_T0000277;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000277;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000277:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6755468	6755613	.	-	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;transcript_id=NA19239_ch_T0000277;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000277;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000277:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6755468	6755613	.	-	2	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;transcript_id=NA19239_ch_T0000277;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000277;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000277:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6755614	6755714	.	-	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;transcript_id=NA19239_ch_T0000277;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000277;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000277:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6755715	6755826	.	-	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;transcript_id=NA19239_ch_T0000277;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000277;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000277:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6755715	6755826	.	-	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;transcript_id=NA19239_ch_T0000277;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000277;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000277:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6755827	6755954	.	-	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;transcript_id=NA19239_ch_T0000277;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000277;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000277:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6755955	6756032	.	-	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;transcript_id=NA19239_ch_T0000277;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000277;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000277:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6755955	6756032	.	-	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;transcript_id=NA19239_ch_T0000277;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000277;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000277:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6756033	6756639	.	-	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;transcript_id=NA19239_ch_T0000277;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000277;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000277:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6756640	6757171	.	-	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;transcript_id=NA19239_ch_T0000277;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000277;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000277:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6756640	6757125	.	-	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;transcript_id=NA19239_ch_T0000277;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000277;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000277:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6757123	6757125	.	-	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;transcript_id=NA19239_ch_T0000277;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000277;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=start_codon:NA19239_ch_T0000277;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6754375	6757171	100	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;transcript_id=NA19239_ch_T0000278;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_G0000098;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=NA19239_ch_T0000278;Name=TSPY1
NA19239_chrY	CAT	exon	6754375	6754585	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;transcript_id=NA19239_ch_T0000278;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000278:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6754563	6754585	.	-	2	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;transcript_id=NA19239_ch_T0000278;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000278:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6754563	6754565	.	-	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;transcript_id=NA19239_ch_T0000278;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=stop_codon:NA19239_ch_T0000278;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6754586	6755279	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;transcript_id=NA19239_ch_T0000278;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000278:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6755280	6755361	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;transcript_id=NA19239_ch_T0000278;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000278:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6755280	6755361	.	-	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;transcript_id=NA19239_ch_T0000278;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000278:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6755362	6755467	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;transcript_id=NA19239_ch_T0000278;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000278:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6755468	6755613	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;transcript_id=NA19239_ch_T0000278;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000278:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6755468	6755613	.	-	2	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;transcript_id=NA19239_ch_T0000278;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000278:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6755614	6755714	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;transcript_id=NA19239_ch_T0000278;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000278:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6755715	6755826	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;transcript_id=NA19239_ch_T0000278;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000278:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6755715	6755826	.	-	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;transcript_id=NA19239_ch_T0000278;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000278:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6755827	6755954	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;transcript_id=NA19239_ch_T0000278;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000278:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6755955	6756032	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;transcript_id=NA19239_ch_T0000278;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000278:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6755955	6756032	.	-	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;transcript_id=NA19239_ch_T0000278;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000278:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6756033	6756639	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;transcript_id=NA19239_ch_T0000278;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000278:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6756640	6756777	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;transcript_id=NA19239_ch_T0000278;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000278:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6756640	6756777	.	-	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;transcript_id=NA19239_ch_T0000278;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000278:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6756778	6757038	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;transcript_id=NA19239_ch_T0000278;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000278:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6757039	6757171	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;transcript_id=NA19239_ch_T0000278;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000278:6;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6757039	6757125	.	-	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;transcript_id=NA19239_ch_T0000278;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000278:6;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6757123	6757125	.	-	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;transcript_id=NA19239_ch_T0000278;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=start_codon:NA19239_ch_T0000278;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6754375	6757171	100	-	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;transcript_id=NA19239_ch_T0000279;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_G0000098;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=NA19239_ch_T0000279;Name=TSPY1
NA19239_chrY	CAT	exon	6754375	6754585	.	-	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;transcript_id=NA19239_ch_T0000279;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000279:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6754563	6754585	.	-	2	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;transcript_id=NA19239_ch_T0000279;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000279:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6754563	6754565	.	-	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;transcript_id=NA19239_ch_T0000279;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=stop_codon:NA19239_ch_T0000279;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6754586	6755279	.	-	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;transcript_id=NA19239_ch_T0000279;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000279:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6755280	6755361	.	-	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;transcript_id=NA19239_ch_T0000279;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000279:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6755280	6755361	.	-	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;transcript_id=NA19239_ch_T0000279;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000279:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6755362	6755467	.	-	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;transcript_id=NA19239_ch_T0000279;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000279:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6755468	6755613	.	-	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;transcript_id=NA19239_ch_T0000279;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000279:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6755468	6755613	.	-	2	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;transcript_id=NA19239_ch_T0000279;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000279:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6755614	6755714	.	-	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;transcript_id=NA19239_ch_T0000279;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000279:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6755715	6755826	.	-	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;transcript_id=NA19239_ch_T0000279;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000279:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6755715	6755826	.	-	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;transcript_id=NA19239_ch_T0000279;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000279:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6755827	6755954	.	-	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;transcript_id=NA19239_ch_T0000279;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000279:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6755955	6756032	.	-	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;transcript_id=NA19239_ch_T0000279;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000279:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6755955	6756032	.	-	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;transcript_id=NA19239_ch_T0000279;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000279:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6756033	6756639	.	-	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;transcript_id=NA19239_ch_T0000279;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000279:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6756640	6757171	.	-	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;transcript_id=NA19239_ch_T0000279;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000279:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6756640	6757125	.	-	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;transcript_id=NA19239_ch_T0000279;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000279:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6757123	6757125	.	-	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;transcript_id=NA19239_ch_T0000279;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=start_codon:NA19239_ch_T0000279;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6754375	6757171	100	-	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;transcript_id=NA19239_ch_T0000280;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_G0000098;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=NA19239_ch_T0000280;Name=TSPY1
NA19239_chrY	CAT	exon	6754375	6754585	.	-	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;transcript_id=NA19239_ch_T0000280;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000280:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6754586	6755279	.	-	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;transcript_id=NA19239_ch_T0000280;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000280:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6755280	6755361	.	-	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;transcript_id=NA19239_ch_T0000280;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000280:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6755310	6755361	.	-	1	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;transcript_id=NA19239_ch_T0000280;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000280:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6755310	6755312	.	-	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;transcript_id=NA19239_ch_T0000280;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=stop_codon:NA19239_ch_T0000280;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6755362	6755467	.	-	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;transcript_id=NA19239_ch_T0000280;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000280:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6755468	6755606	.	-	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;transcript_id=NA19239_ch_T0000280;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000280:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6755468	6755606	.	-	2	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;transcript_id=NA19239_ch_T0000280;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000280:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6755607	6755714	.	-	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;transcript_id=NA19239_ch_T0000280;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000280:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6755715	6755826	.	-	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;transcript_id=NA19239_ch_T0000280;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000280:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6755715	6755826	.	-	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;transcript_id=NA19239_ch_T0000280;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000280:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6755827	6755954	.	-	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;transcript_id=NA19239_ch_T0000280;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000280:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6755955	6756032	.	-	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;transcript_id=NA19239_ch_T0000280;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000280:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6755955	6756032	.	-	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;transcript_id=NA19239_ch_T0000280;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000280:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6756033	6756639	.	-	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;transcript_id=NA19239_ch_T0000280;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19239_ch_T0000280:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6756640	6757171	.	-	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;transcript_id=NA19239_ch_T0000280;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19239_ch_T0000280:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6756640	6757125	.	-	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;transcript_id=NA19239_ch_T0000280;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19239_ch_T0000280:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6757123	6757125	.	-	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;transcript_id=NA19239_ch_T0000280;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=start_codon:NA19239_ch_T0000280;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6754375	6757171	1000	-	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;transcript_id=NA19239_ch_T0000281;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_G0000098;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=NA19239_ch_T0000281;Name=TSPY1
NA19239_chrY	CAT	exon	6754375	6754585	.	-	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;transcript_id=NA19239_ch_T0000281;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000281;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:NA19239_ch_T0000281:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6754586	6755279	.	-	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;transcript_id=NA19239_ch_T0000281;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000281;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:NA19239_ch_T0000281:0;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6755280	6755372	.	-	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;transcript_id=NA19239_ch_T0000281;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000281;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:NA19239_ch_T0000281:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6755373	6755467	.	-	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;transcript_id=NA19239_ch_T0000281;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000281;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:NA19239_ch_T0000281:1;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6755468	6755606	.	-	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;transcript_id=NA19239_ch_T0000281;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000281;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:NA19239_ch_T0000281:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6755607	6755714	.	-	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;transcript_id=NA19239_ch_T0000281;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000281;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:NA19239_ch_T0000281:2;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6755715	6755826	.	-	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;transcript_id=NA19239_ch_T0000281;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000281;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:NA19239_ch_T0000281:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6755827	6755954	.	-	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;transcript_id=NA19239_ch_T0000281;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000281;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:NA19239_ch_T0000281:3;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6755955	6756032	.	-	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;transcript_id=NA19239_ch_T0000281;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000281;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:NA19239_ch_T0000281:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6756033	6756639	.	-	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;transcript_id=NA19239_ch_T0000281;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000281;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:NA19239_ch_T0000281:4;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6756640	6757171	.	-	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;transcript_id=NA19239_ch_T0000281;gene_id=NA19239_ch_G0000098;Parent=NA19239_ch_T0000281;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:NA19239_ch_T0000281:5;Name=TSPY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6759695	6765379	.	+	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_195;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;gene_id=NA19239_ch_G0000099;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=NA19239_ch_G0000099;Name=FAM197Y2
NA19239_chrY	CAT	transcript	6759695	6765379	1000	+	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=NA19239_ch_T0000282;gene_id=NA19239_ch_G0000099;Parent=NA19239_ch_G0000099;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=NA19239_ch_T0000282;Name=FAM197Y2
NA19239_chrY	CAT	exon	6759695	6759885	.	+	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=NA19239_ch_T0000282;gene_id=NA19239_ch_G0000099;Parent=NA19239_ch_T0000282;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000282:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6759886	6759971	.	+	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=NA19239_ch_T0000282;gene_id=NA19239_ch_G0000099;Parent=NA19239_ch_T0000282;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000282:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6759972	6760117	.	+	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=NA19239_ch_T0000282;gene_id=NA19239_ch_G0000099;Parent=NA19239_ch_T0000282;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000282:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6760118	6761610	.	+	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=NA19239_ch_T0000282;gene_id=NA19239_ch_G0000099;Parent=NA19239_ch_T0000282;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000282:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6761611	6761769	.	+	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=NA19239_ch_T0000282;gene_id=NA19239_ch_G0000099;Parent=NA19239_ch_T0000282;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000282:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6761770	6765319	.	+	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=NA19239_ch_T0000282;gene_id=NA19239_ch_G0000099;Parent=NA19239_ch_T0000282;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=intron:NA19239_ch_T0000282:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6765320	6765379	.	+	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=NA19239_ch_T0000282;gene_id=NA19239_ch_G0000099;Parent=NA19239_ch_T0000282;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=exon:NA19239_ch_T0000282:3;Name=FAM197Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6774647	6777461	.	-	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_194;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;gene_id=NA19239_ch_G0000100;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=NA19239_ch_G0000100;Name=TSPY4
NA19239_chrY	CAT	transcript	6774647	6777461	100	-	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=NA19239_ch_T0000283;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_G0000100;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=NA19239_ch_T0000283;Name=TSPY4
NA19239_chrY	CAT	exon	6774647	6774857	.	-	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=NA19239_ch_T0000283;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000283;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000283:0;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6774835	6774857	.	-	2	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=NA19239_ch_T0000283;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000283;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000283:0;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6774835	6774837	.	-	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=NA19239_ch_T0000283;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000283;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=stop_codon:NA19239_ch_T0000283;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6774858	6775551	.	-	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=NA19239_ch_T0000283;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000283;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000283:0;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6775552	6775633	.	-	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=NA19239_ch_T0000283;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000283;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000283:1;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6775552	6775633	.	-	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=NA19239_ch_T0000283;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000283;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000283:1;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6775634	6775739	.	-	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=NA19239_ch_T0000283;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000283;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000283:1;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6775740	6775885	.	-	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=NA19239_ch_T0000283;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000283;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000283:2;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6775740	6775885	.	-	2	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=NA19239_ch_T0000283;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000283;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000283:2;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6775886	6775986	.	-	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=NA19239_ch_T0000283;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000283;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000283:2;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6775987	6776098	.	-	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=NA19239_ch_T0000283;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000283;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000283:3;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6775987	6776098	.	-	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=NA19239_ch_T0000283;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000283;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000283:3;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6776099	6776226	.	-	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=NA19239_ch_T0000283;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000283;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000283:3;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6776227	6776304	.	-	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=NA19239_ch_T0000283;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000283;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000283:4;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6776227	6776304	.	-	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=NA19239_ch_T0000283;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000283;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000283:4;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6776305	6776911	.	-	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=NA19239_ch_T0000283;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000283;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000283:4;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6776912	6777461	.	-	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=NA19239_ch_T0000283;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000283;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000283:5;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6776912	6777415	.	-	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=NA19239_ch_T0000283;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000283;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000283:5;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6777413	6777415	.	-	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=NA19239_ch_T0000283;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000283;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=start_codon:NA19239_ch_T0000283;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6774647	6777461	100	-	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=NA19239_ch_T0000284;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_G0000100;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=NA19239_ch_T0000284;Name=TSPY4
NA19239_chrY	CAT	exon	6774647	6774857	.	-	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=NA19239_ch_T0000284;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000284;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000284:0;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6774858	6775551	.	-	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=NA19239_ch_T0000284;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000284;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000284:0;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6775552	6775644	.	-	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=NA19239_ch_T0000284;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000284;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000284:1;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6775582	6775644	.	-	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=NA19239_ch_T0000284;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000284;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000284:0;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6775582	6775584	.	-	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=NA19239_ch_T0000284;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000284;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=stop_codon:NA19239_ch_T0000284;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6775645	6775739	.	-	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=NA19239_ch_T0000284;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000284;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000284:1;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6775740	6775885	.	-	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=NA19239_ch_T0000284;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000284;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000284:2;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6775740	6775885	.	-	2	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=NA19239_ch_T0000284;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000284;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000284:1;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6775886	6775986	.	-	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=NA19239_ch_T0000284;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000284;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000284:2;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6775987	6776098	.	-	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=NA19239_ch_T0000284;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000284;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000284:3;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6775987	6776098	.	-	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=NA19239_ch_T0000284;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000284;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000284:2;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6776099	6776226	.	-	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=NA19239_ch_T0000284;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000284;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000284:3;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6776227	6776304	.	-	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=NA19239_ch_T0000284;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000284;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000284:4;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6776227	6776304	.	-	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=NA19239_ch_T0000284;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000284;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000284:3;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6776305	6776911	.	-	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=NA19239_ch_T0000284;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000284;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000284:4;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6776912	6777461	.	-	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=NA19239_ch_T0000284;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000284;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000284:5;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6776912	6777415	.	-	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=NA19239_ch_T0000284;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000284;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000284:4;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6777413	6777415	.	-	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=NA19239_ch_T0000284;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000284;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=start_codon:NA19239_ch_T0000284;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6774647	6777461	100	-	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=NA19239_ch_T0000285;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_G0000100;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=NA19239_ch_T0000285;Name=TSPY4
NA19239_chrY	CAT	exon	6774647	6774857	.	-	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=NA19239_ch_T0000285;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000285;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000285:0;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6774858	6775551	.	-	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=NA19239_ch_T0000285;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000285;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000285:0;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6775552	6775633	.	-	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=NA19239_ch_T0000285;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000285;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000285:1;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6775582	6775633	.	-	1	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=NA19239_ch_T0000285;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000285;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000285:0;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6775582	6775584	.	-	0	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=NA19239_ch_T0000285;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000285;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=stop_codon:NA19239_ch_T0000285;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6775634	6775739	.	-	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=NA19239_ch_T0000285;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000285;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000285:1;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6775740	6775878	.	-	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=NA19239_ch_T0000285;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000285;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000285:2;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6775740	6775878	.	-	2	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=NA19239_ch_T0000285;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000285;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000285:1;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6775879	6775986	.	-	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=NA19239_ch_T0000285;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000285;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000285:2;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6775987	6776098	.	-	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=NA19239_ch_T0000285;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000285;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000285:3;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6775987	6776098	.	-	0	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=NA19239_ch_T0000285;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000285;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000285:2;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6776099	6776226	.	-	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=NA19239_ch_T0000285;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000285;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000285:3;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6776227	6776304	.	-	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=NA19239_ch_T0000285;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000285;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000285:4;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6776227	6776304	.	-	0	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=NA19239_ch_T0000285;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000285;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000285:3;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6776305	6776911	.	-	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=NA19239_ch_T0000285;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000285;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:NA19239_ch_T0000285:4;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6776912	6777461	.	-	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=NA19239_ch_T0000285;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000285;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:NA19239_ch_T0000285:5;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6776912	6777415	.	-	0	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=NA19239_ch_T0000285;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000285;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:NA19239_ch_T0000285:4;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6777413	6777415	.	-	0	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=NA19239_ch_T0000285;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000285;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=start_codon:NA19239_ch_T0000285;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6774647	6777461	1000	-	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=NA19239_ch_T0000286;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_G0000100;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=NA19239_ch_T0000286;Name=TSPY4
NA19239_chrY	CAT	exon	6774647	6774857	.	-	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=NA19239_ch_T0000286;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000286;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:NA19239_ch_T0000286:0;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6774858	6775551	.	-	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=NA19239_ch_T0000286;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000286;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=intron:NA19239_ch_T0000286:0;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6775552	6775644	.	-	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=NA19239_ch_T0000286;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000286;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:NA19239_ch_T0000286:1;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6775645	6775739	.	-	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=NA19239_ch_T0000286;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000286;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=intron:NA19239_ch_T0000286:1;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6775740	6775878	.	-	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=NA19239_ch_T0000286;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000286;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:NA19239_ch_T0000286:2;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6775879	6775986	.	-	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=NA19239_ch_T0000286;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000286;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=intron:NA19239_ch_T0000286:2;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6775987	6776098	.	-	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=NA19239_ch_T0000286;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000286;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:NA19239_ch_T0000286:3;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6776099	6776226	.	-	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=NA19239_ch_T0000286;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000286;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=intron:NA19239_ch_T0000286:3;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6776227	6776304	.	-	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=NA19239_ch_T0000286;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000286;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:NA19239_ch_T0000286:4;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6776305	6776911	.	-	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=NA19239_ch_T0000286;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000286;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=intron:NA19239_ch_T0000286:4;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6776912	6777461	.	-	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=NA19239_ch_T0000286;gene_id=NA19239_ch_G0000100;Parent=NA19239_ch_T0000286;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:NA19239_ch_T0000286:5;Name=TSPY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6780075	6785688	.	+	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_177;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;gene_id=NA19239_ch_G0000101;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=NA19239_ch_G0000101;Name=FAM197Y3
NA19239_chrY	CAT	transcript	6780075	6785688	1000	+	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=NA19239_ch_T0000287;gene_id=NA19239_ch_G0000101;Parent=NA19239_ch_G0000101;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=NA19239_ch_T0000287;Name=FAM197Y3
NA19239_chrY	CAT	exon	6780075	6780176	.	+	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=NA19239_ch_T0000287;gene_id=NA19239_ch_G0000101;Parent=NA19239_ch_T0000287;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=exon:NA19239_ch_T0000287:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6780177	6780262	.	+	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=NA19239_ch_T0000287;gene_id=NA19239_ch_G0000101;Parent=NA19239_ch_T0000287;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=intron:NA19239_ch_T0000287:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6780263	6780408	.	+	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=NA19239_ch_T0000287;gene_id=NA19239_ch_G0000101;Parent=NA19239_ch_T0000287;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=exon:NA19239_ch_T0000287:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6780409	6781918	.	+	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=NA19239_ch_T0000287;gene_id=NA19239_ch_G0000101;Parent=NA19239_ch_T0000287;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=intron:NA19239_ch_T0000287:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6781919	6782077	.	+	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=NA19239_ch_T0000287;gene_id=NA19239_ch_G0000101;Parent=NA19239_ch_T0000287;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=exon:NA19239_ch_T0000287:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6782078	6785628	.	+	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=NA19239_ch_T0000287;gene_id=NA19239_ch_G0000101;Parent=NA19239_ch_T0000287;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=intron:NA19239_ch_T0000287:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6785629	6785688	.	+	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=NA19239_ch_T0000287;gene_id=NA19239_ch_G0000101;Parent=NA19239_ch_T0000287;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=exon:NA19239_ch_T0000287:3;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6795000	6797796	.	-	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_178;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;gene_id=NA19239_ch_G0000102;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=NA19239_ch_G0000102;Name=TSPY10
NA19239_chrY	CAT	transcript	6795000	6797796	100	-	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=NA19239_ch_T0000288;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_G0000102;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=NA19239_ch_T0000288;Name=TSPY10
NA19239_chrY	CAT	exon	6795000	6795210	.	-	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=NA19239_ch_T0000288;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000288;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000288:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6795188	6795210	.	-	2	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=NA19239_ch_T0000288;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000288;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000288:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6795188	6795190	.	-	0	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=NA19239_ch_T0000288;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000288;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=stop_codon:NA19239_ch_T0000288;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6795211	6795904	.	-	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=NA19239_ch_T0000288;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000288;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000288:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6795905	6795986	.	-	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=NA19239_ch_T0000288;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000288;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000288:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6795905	6795986	.	-	0	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=NA19239_ch_T0000288;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000288;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000288:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6795987	6796092	.	-	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=NA19239_ch_T0000288;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000288;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000288:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6796093	6796238	.	-	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=NA19239_ch_T0000288;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000288;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000288:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6796093	6796238	.	-	2	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=NA19239_ch_T0000288;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000288;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000288:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6796239	6796339	.	-	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=NA19239_ch_T0000288;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000288;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000288:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6796340	6796451	.	-	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=NA19239_ch_T0000288;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000288;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000288:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6796340	6796451	.	-	0	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=NA19239_ch_T0000288;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000288;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000288:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6796452	6796579	.	-	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=NA19239_ch_T0000288;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000288;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000288:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6796580	6796657	.	-	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=NA19239_ch_T0000288;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000288;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000288:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6796580	6796657	.	-	0	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=NA19239_ch_T0000288;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000288;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000288:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6796658	6797264	.	-	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=NA19239_ch_T0000288;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000288;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000288:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6797265	6797796	.	-	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=NA19239_ch_T0000288;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000288;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000288:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6797265	6797750	.	-	0	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=NA19239_ch_T0000288;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000288;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000288:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6797748	6797750	.	-	0	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=NA19239_ch_T0000288;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000288;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=start_codon:NA19239_ch_T0000288;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6795000	6797796	100	-	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;transcript_id=NA19239_ch_T0000289;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_G0000102;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=NA19239_ch_T0000289;Name=TSPY10
NA19239_chrY	CAT	exon	6795000	6795210	.	-	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;transcript_id=NA19239_ch_T0000289;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000289;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000289:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6795211	6795904	.	-	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;transcript_id=NA19239_ch_T0000289;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000289;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000289:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6795905	6795997	.	-	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;transcript_id=NA19239_ch_T0000289;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000289;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000289:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6795935	6795997	.	-	0	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;transcript_id=NA19239_ch_T0000289;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000289;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000289:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6795935	6795937	.	-	0	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;transcript_id=NA19239_ch_T0000289;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000289;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=stop_codon:NA19239_ch_T0000289;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6795998	6796092	.	-	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;transcript_id=NA19239_ch_T0000289;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000289;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000289:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6796093	6796238	.	-	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;transcript_id=NA19239_ch_T0000289;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000289;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000289:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6796093	6796238	.	-	2	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;transcript_id=NA19239_ch_T0000289;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000289;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000289:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6796239	6796339	.	-	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;transcript_id=NA19239_ch_T0000289;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000289;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000289:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6796340	6796451	.	-	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;transcript_id=NA19239_ch_T0000289;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000289;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000289:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6796340	6796451	.	-	0	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;transcript_id=NA19239_ch_T0000289;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000289;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000289:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6796452	6796579	.	-	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;transcript_id=NA19239_ch_T0000289;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000289;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000289:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6796580	6796657	.	-	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;transcript_id=NA19239_ch_T0000289;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000289;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000289:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6796580	6796657	.	-	0	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;transcript_id=NA19239_ch_T0000289;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000289;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000289:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6796658	6797264	.	-	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;transcript_id=NA19239_ch_T0000289;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000289;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000289:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6797265	6797796	.	-	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;transcript_id=NA19239_ch_T0000289;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000289;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000289:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6797265	6797750	.	-	0	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;transcript_id=NA19239_ch_T0000289;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000289;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000289:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6797748	6797750	.	-	0	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;transcript_id=NA19239_ch_T0000289;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000289;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=start_codon:NA19239_ch_T0000289;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6795000	6797796	100	-	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;transcript_id=NA19239_ch_T0000290;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_G0000102;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=NA19239_ch_T0000290;Name=TSPY10
NA19239_chrY	CAT	exon	6795000	6795210	.	-	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;transcript_id=NA19239_ch_T0000290;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000290;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000290:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6795211	6795904	.	-	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;transcript_id=NA19239_ch_T0000290;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000290;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000290:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6795905	6795986	.	-	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;transcript_id=NA19239_ch_T0000290;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000290;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000290:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6795935	6795986	.	-	1	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;transcript_id=NA19239_ch_T0000290;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000290;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000290:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6795935	6795937	.	-	0	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;transcript_id=NA19239_ch_T0000290;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000290;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=stop_codon:NA19239_ch_T0000290;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6795987	6796092	.	-	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;transcript_id=NA19239_ch_T0000290;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000290;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000290:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6796093	6796231	.	-	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;transcript_id=NA19239_ch_T0000290;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000290;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000290:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6796093	6796231	.	-	2	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;transcript_id=NA19239_ch_T0000290;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000290;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000290:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6796232	6796339	.	-	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;transcript_id=NA19239_ch_T0000290;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000290;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000290:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6796340	6796451	.	-	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;transcript_id=NA19239_ch_T0000290;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000290;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000290:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6796340	6796451	.	-	0	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;transcript_id=NA19239_ch_T0000290;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000290;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000290:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6796452	6796579	.	-	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;transcript_id=NA19239_ch_T0000290;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000290;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000290:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6796580	6796657	.	-	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;transcript_id=NA19239_ch_T0000290;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000290;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000290:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6796580	6796657	.	-	0	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;transcript_id=NA19239_ch_T0000290;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000290;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000290:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6796658	6797264	.	-	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;transcript_id=NA19239_ch_T0000290;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000290;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000290:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6797265	6797796	.	-	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;transcript_id=NA19239_ch_T0000290;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000290;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000290:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6797265	6797750	.	-	0	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;transcript_id=NA19239_ch_T0000290;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000290;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000290:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6797748	6797750	.	-	0	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;transcript_id=NA19239_ch_T0000290;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000290;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=start_codon:NA19239_ch_T0000290;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6795000	6797796	1000	-	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;transcript_id=NA19239_ch_T0000291;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_G0000102;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=NA19239_ch_T0000291;Name=TSPY10
NA19239_chrY	CAT	exon	6795000	6795210	.	-	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;transcript_id=NA19239_ch_T0000291;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000291;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000291:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6795211	6795904	.	-	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;transcript_id=NA19239_ch_T0000291;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000291;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000291:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6795905	6795997	.	-	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;transcript_id=NA19239_ch_T0000291;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000291;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000291:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6795998	6796092	.	-	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;transcript_id=NA19239_ch_T0000291;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000291;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000291:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6796093	6796231	.	-	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;transcript_id=NA19239_ch_T0000291;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000291;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000291:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6796232	6796339	.	-	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;transcript_id=NA19239_ch_T0000291;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000291;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000291:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6796340	6796451	.	-	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;transcript_id=NA19239_ch_T0000291;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000291;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000291:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6796452	6796579	.	-	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;transcript_id=NA19239_ch_T0000291;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000291;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000291:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6796580	6796657	.	-	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;transcript_id=NA19239_ch_T0000291;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000291;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000291:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6796658	6797264	.	-	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;transcript_id=NA19239_ch_T0000291;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000291;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000291:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6797265	6797796	.	-	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;transcript_id=NA19239_ch_T0000291;gene_id=NA19239_ch_G0000102;Parent=NA19239_ch_T0000291;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000291:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6800411	6806009	.	+	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_153;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;gene_id=NA19239_ch_G0000103;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=NA19239_ch_G0000103;Name=FAM197Y3
NA19239_chrY	CAT	transcript	6800411	6806009	1000	+	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=NA19239_ch_T0000292;gene_id=NA19239_ch_G0000103;Parent=NA19239_ch_G0000103;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=NA19239_ch_T0000292;Name=FAM197Y3
NA19239_chrY	CAT	exon	6800411	6800512	.	+	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=NA19239_ch_T0000292;gene_id=NA19239_ch_G0000103;Parent=NA19239_ch_T0000292;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=exon:NA19239_ch_T0000292:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6800513	6800598	.	+	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=NA19239_ch_T0000292;gene_id=NA19239_ch_G0000103;Parent=NA19239_ch_T0000292;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=intron:NA19239_ch_T0000292:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6800599	6800744	.	+	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=NA19239_ch_T0000292;gene_id=NA19239_ch_G0000103;Parent=NA19239_ch_T0000292;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=exon:NA19239_ch_T0000292:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6800745	6802240	.	+	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=NA19239_ch_T0000292;gene_id=NA19239_ch_G0000103;Parent=NA19239_ch_T0000292;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=intron:NA19239_ch_T0000292:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6802241	6802399	.	+	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=NA19239_ch_T0000292;gene_id=NA19239_ch_G0000103;Parent=NA19239_ch_T0000292;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=exon:NA19239_ch_T0000292:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6802400	6805949	.	+	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=NA19239_ch_T0000292;gene_id=NA19239_ch_G0000103;Parent=NA19239_ch_T0000292;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=intron:NA19239_ch_T0000292:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6805950	6806009	.	+	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=NA19239_ch_T0000292;gene_id=NA19239_ch_G0000103;Parent=NA19239_ch_T0000292;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=exon:NA19239_ch_T0000292:3;Name=FAM197Y3;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6815298	6818094	.	-	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_190;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;gene_id=NA19239_ch_G0000104;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=NA19239_ch_G0000104;Name=TSPY10
NA19239_chrY	CAT	transcript	6815298	6818094	100	-	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19239_ch_T0000293;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_G0000104;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=NA19239_ch_T0000293;Name=TSPY10
NA19239_chrY	CAT	exon	6815298	6815508	.	-	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19239_ch_T0000293;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000293;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000293:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6815486	6815508	.	-	2	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19239_ch_T0000293;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000293;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000293:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6815486	6815488	.	-	0	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19239_ch_T0000293;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000293;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=stop_codon:NA19239_ch_T0000293;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6815509	6816202	.	-	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19239_ch_T0000293;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000293;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000293:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6816203	6816284	.	-	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19239_ch_T0000293;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000293;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000293:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6816203	6816284	.	-	0	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19239_ch_T0000293;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000293;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000293:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6816285	6816390	.	-	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19239_ch_T0000293;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000293;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000293:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6816391	6816536	.	-	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19239_ch_T0000293;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000293;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000293:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6816391	6816536	.	-	2	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19239_ch_T0000293;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000293;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000293:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6816537	6816637	.	-	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19239_ch_T0000293;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000293;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000293:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6816638	6816749	.	-	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19239_ch_T0000293;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000293;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000293:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6816638	6816749	.	-	0	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19239_ch_T0000293;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000293;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000293:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6816750	6816877	.	-	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19239_ch_T0000293;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000293;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000293:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6816878	6816955	.	-	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19239_ch_T0000293;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000293;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000293:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6816878	6816955	.	-	0	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19239_ch_T0000293;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000293;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000293:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6816956	6817562	.	-	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19239_ch_T0000293;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000293;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000293:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6817563	6818094	.	-	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19239_ch_T0000293;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000293;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000293:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6817563	6818048	.	-	0	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19239_ch_T0000293;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000293;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000293:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6818046	6818048	.	-	0	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19239_ch_T0000293;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000293;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=start_codon:NA19239_ch_T0000293;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6815298	6818094	100	-	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=NA19239_ch_T0000294;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_G0000104;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=NA19239_ch_T0000294;Name=TSPY10
NA19239_chrY	CAT	exon	6815298	6815508	.	-	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=NA19239_ch_T0000294;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000294;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000294:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6815509	6816202	.	-	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=NA19239_ch_T0000294;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000294;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000294:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6816203	6816295	.	-	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=NA19239_ch_T0000294;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000294;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000294:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6816233	6816295	.	-	0	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=NA19239_ch_T0000294;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000294;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000294:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6816233	6816235	.	-	0	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=NA19239_ch_T0000294;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000294;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=stop_codon:NA19239_ch_T0000294;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6816296	6816390	.	-	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=NA19239_ch_T0000294;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000294;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000294:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6816391	6816536	.	-	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=NA19239_ch_T0000294;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000294;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000294:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6816391	6816536	.	-	2	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=NA19239_ch_T0000294;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000294;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000294:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6816537	6816637	.	-	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=NA19239_ch_T0000294;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000294;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000294:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6816638	6816749	.	-	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=NA19239_ch_T0000294;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000294;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000294:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6816638	6816749	.	-	0	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=NA19239_ch_T0000294;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000294;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000294:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6816750	6816877	.	-	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=NA19239_ch_T0000294;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000294;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000294:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6816878	6816955	.	-	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=NA19239_ch_T0000294;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000294;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000294:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6816878	6816955	.	-	0	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=NA19239_ch_T0000294;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000294;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000294:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6816956	6817562	.	-	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=NA19239_ch_T0000294;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000294;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000294:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6817563	6818094	.	-	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=NA19239_ch_T0000294;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000294;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000294:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6817563	6818048	.	-	0	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=NA19239_ch_T0000294;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000294;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000294:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6818046	6818048	.	-	0	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=NA19239_ch_T0000294;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000294;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=start_codon:NA19239_ch_T0000294;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6815298	6818094	100	-	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=NA19239_ch_T0000295;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_G0000104;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=NA19239_ch_T0000295;Name=TSPY10
NA19239_chrY	CAT	exon	6815298	6815508	.	-	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=NA19239_ch_T0000295;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000295;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000295:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6815509	6816202	.	-	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=NA19239_ch_T0000295;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000295;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000295:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6816203	6816284	.	-	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=NA19239_ch_T0000295;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000295;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000295:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6816233	6816284	.	-	1	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=NA19239_ch_T0000295;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000295;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000295:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	6816233	6816235	.	-	0	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=NA19239_ch_T0000295;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000295;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=stop_codon:NA19239_ch_T0000295;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6816285	6816390	.	-	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=NA19239_ch_T0000295;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000295;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000295:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6816391	6816529	.	-	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=NA19239_ch_T0000295;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000295;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000295:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6816391	6816529	.	-	2	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=NA19239_ch_T0000295;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000295;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000295:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6816530	6816637	.	-	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=NA19239_ch_T0000295;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000295;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000295:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6816638	6816749	.	-	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=NA19239_ch_T0000295;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000295;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000295:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6816638	6816749	.	-	0	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=NA19239_ch_T0000295;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000295;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000295:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6816750	6816877	.	-	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=NA19239_ch_T0000295;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000295;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000295:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6816878	6816955	.	-	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=NA19239_ch_T0000295;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000295;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000295:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6816878	6816955	.	-	0	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=NA19239_ch_T0000295;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000295;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000295:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6816956	6817562	.	-	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=NA19239_ch_T0000295;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000295;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:NA19239_ch_T0000295:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6817563	6818094	.	-	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=NA19239_ch_T0000295;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000295;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:NA19239_ch_T0000295:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	6817563	6818048	.	-	0	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=NA19239_ch_T0000295;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000295;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:NA19239_ch_T0000295:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	6818046	6818048	.	-	0	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=NA19239_ch_T0000295;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000295;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=start_codon:NA19239_ch_T0000295;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	6815298	6818094	1000	-	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=NA19239_ch_T0000296;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_G0000104;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=NA19239_ch_T0000296;Name=TSPY10
NA19239_chrY	CAT	exon	6815298	6815508	.	-	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=NA19239_ch_T0000296;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000296;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000296:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6815509	6816202	.	-	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=NA19239_ch_T0000296;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000296;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000296:0;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6816203	6816295	.	-	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=NA19239_ch_T0000296;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000296;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000296:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6816296	6816390	.	-	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=NA19239_ch_T0000296;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000296;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000296:1;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6816391	6816529	.	-	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=NA19239_ch_T0000296;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000296;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000296:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6816530	6816637	.	-	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=NA19239_ch_T0000296;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000296;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000296:2;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6816638	6816749	.	-	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=NA19239_ch_T0000296;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000296;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000296:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6816750	6816877	.	-	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=NA19239_ch_T0000296;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000296;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000296:3;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6816878	6816955	.	-	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=NA19239_ch_T0000296;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000296;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000296:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6816956	6817562	.	-	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=NA19239_ch_T0000296;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000296;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=intron:NA19239_ch_T0000296:4;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6817563	6818094	.	-	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=NA19239_ch_T0000296;gene_id=NA19239_ch_G0000104;Parent=NA19239_ch_T0000296;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=exon:NA19239_ch_T0000296:5;Name=TSPY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6820726	6825678	.	+	.	source_gene_common_name=TTTY20;source_gene=hg002_chrY_paternal_151;alternative_source_transcripts=hg002_chrY_paternal_151.1,hg002_chrY_paternal_151.1;gene_id=NA19239_ch_G0000105;gene_biotype=lncRNA;gene_name=TTTY20;gene_sources=liftoff;ID=NA19239_ch_G0000105;Name=TTTY20
NA19239_chrY	CAT	transcript	6820726	6825678	1000	+	.	source_transcript=hg002_chrY_paternal_151.1;source_transcript_name=hg002_chrY_paternal_151.1;source_gene=hg002_chrY_paternal_151;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_151;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_151.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_151.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=hg002_chrY_paternal_151.1,hg002_chrY_paternal_151.1;transcript_id=NA19239_ch_T0000297;gene_id=NA19239_ch_G0000105;Parent=NA19239_ch_G0000105;transcript_name=hg002_chrY_paternal_151.1;gene_name=TTTY20;ID=NA19239_ch_T0000297;Name=TTTY20
NA19239_chrY	CAT	exon	6820726	6820807	.	+	.	source_transcript=hg002_chrY_paternal_151.1;source_transcript_name=hg002_chrY_paternal_151.1;source_gene=hg002_chrY_paternal_151;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_151;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_151.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_151.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=hg002_chrY_paternal_151.1,hg002_chrY_paternal_151.1;transcript_id=NA19239_ch_T0000297;gene_id=NA19239_ch_G0000105;Parent=NA19239_ch_T0000297;transcript_name=hg002_chrY_paternal_151.1;gene_name=TTTY20;ID=exon:NA19239_ch_T0000297:0;Name=TTTY20;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6820808	6825501	.	+	.	source_transcript=hg002_chrY_paternal_151.1;source_transcript_name=hg002_chrY_paternal_151.1;source_gene=hg002_chrY_paternal_151;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_151;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_151.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_151.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=hg002_chrY_paternal_151.1,hg002_chrY_paternal_151.1;transcript_id=NA19239_ch_T0000297;gene_id=NA19239_ch_G0000105;Parent=NA19239_ch_T0000297;transcript_name=hg002_chrY_paternal_151.1;gene_name=TTTY20;ID=intron:NA19239_ch_T0000297:0;Name=TTTY20;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6825502	6825678	.	+	.	source_transcript=hg002_chrY_paternal_151.1;source_transcript_name=hg002_chrY_paternal_151.1;source_gene=hg002_chrY_paternal_151;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_151;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_151.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_151.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=hg002_chrY_paternal_151.1,hg002_chrY_paternal_151.1;transcript_id=NA19239_ch_T0000297;gene_id=NA19239_ch_G0000105;Parent=NA19239_ch_T0000297;transcript_name=hg002_chrY_paternal_151.1;gene_name=TTTY20;ID=exon:NA19239_ch_T0000297:1;Name=TTTY20;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6832684	6838497	.	+	.	source_gene_common_name=RBMY1A3P;source_gene=hg002_chrY_paternal_149;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;gene_id=NA19239_ch_G0000106;gene_biotype=transcribed_pseudogene;gene_name=RBMY1A3P;gene_sources=liftoff;ID=NA19239_ch_G0000106;Name=RBMY1A3P
NA19239_chrY	CAT	transcript	6832684	6838497	1000	+	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=NA19239_ch_T0000298;gene_id=NA19239_ch_G0000106;Parent=NA19239_ch_G0000106;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=NA19239_ch_T0000298;Name=RBMY1A3P
NA19239_chrY	CAT	exon	6832684	6832797	.	+	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=NA19239_ch_T0000298;gene_id=NA19239_ch_G0000106;Parent=NA19239_ch_T0000298;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=exon:NA19239_ch_T0000298:0;Name=RBMY1A3P;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6832798	6833269	.	+	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=NA19239_ch_T0000298;gene_id=NA19239_ch_G0000106;Parent=NA19239_ch_T0000298;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=intron:NA19239_ch_T0000298:0;Name=RBMY1A3P;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6833270	6833373	.	+	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=NA19239_ch_T0000298;gene_id=NA19239_ch_G0000106;Parent=NA19239_ch_T0000298;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=exon:NA19239_ch_T0000298:1;Name=RBMY1A3P;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6833374	6836388	.	+	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=NA19239_ch_T0000298;gene_id=NA19239_ch_G0000106;Parent=NA19239_ch_T0000298;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=intron:NA19239_ch_T0000298:1;Name=RBMY1A3P;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6836389	6836566	.	+	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=NA19239_ch_T0000298;gene_id=NA19239_ch_G0000106;Parent=NA19239_ch_T0000298;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=exon:NA19239_ch_T0000298:2;Name=RBMY1A3P;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6836567	6838466	.	+	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=NA19239_ch_T0000298;gene_id=NA19239_ch_G0000106;Parent=NA19239_ch_T0000298;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=intron:NA19239_ch_T0000298:2;Name=RBMY1A3P;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6838467	6838497	.	+	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=NA19239_ch_T0000298;gene_id=NA19239_ch_G0000106;Parent=NA19239_ch_T0000298;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=exon:NA19239_ch_T0000298:3;Name=RBMY1A3P;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6850945	6863179	.	-	.	source_gene_common_name=LOC105379267;source_gene=hg002_chrY_paternal_148;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;gene_id=NA19239_ch_G0000107;gene_biotype=lncRNA;gene_name=LOC105379267;gene_sources=liftoff;ID=NA19239_ch_G0000107;Name=LOC105379267
NA19239_chrY	CAT	transcript	6850945	6863179	1000	-	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=NA19239_ch_T0000299;gene_id=NA19239_ch_G0000107;Parent=NA19239_ch_G0000107;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=NA19239_ch_T0000299;Name=LOC105379267
NA19239_chrY	CAT	exon	6850945	6851015	.	-	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=NA19239_ch_T0000299;gene_id=NA19239_ch_G0000107;Parent=NA19239_ch_T0000299;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=exon:NA19239_ch_T0000299:0;Name=LOC105379267;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6851016	6861687	.	-	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=NA19239_ch_T0000299;gene_id=NA19239_ch_G0000107;Parent=NA19239_ch_T0000299;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=intron:NA19239_ch_T0000299:0;Name=LOC105379267;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6861688	6861762	.	-	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=NA19239_ch_T0000299;gene_id=NA19239_ch_G0000107;Parent=NA19239_ch_T0000299;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=exon:NA19239_ch_T0000299:1;Name=LOC105379267;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6861763	6863007	.	-	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=NA19239_ch_T0000299;gene_id=NA19239_ch_G0000107;Parent=NA19239_ch_T0000299;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=intron:NA19239_ch_T0000299:1;Name=LOC105379267;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6863008	6863179	.	-	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=NA19239_ch_T0000299;gene_id=NA19239_ch_G0000107;Parent=NA19239_ch_T0000299;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=exon:NA19239_ch_T0000299:2;Name=LOC105379267;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6864335	6866586	.	-	.	source_gene_common_name=LOC105379266;source_gene=hg002_chrY_paternal_147;alternative_source_transcripts=hg002_chrY_paternal_147.1;gene_id=NA19239_ch_G0000108;gene_biotype=lncRNA;gene_name=LOC105379266;gene_sources=liftoff,transMap;ID=NA19239_ch_G0000108;Name=LOC105379266
NA19239_chrY	CAT	transcript	6864335	6866586	1000	-	.	source_transcript=hg002_chrY_paternal_147.1;source_transcript_name=hg002_chrY_paternal_147.1;source_gene=hg002_chrY_paternal_147;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_147;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_147.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_147.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_147.1;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000300;gene_id=NA19239_ch_G0000108;Parent=NA19239_ch_G0000108;transcript_name=hg002_chrY_paternal_147.1;gene_name=LOC105379266;ID=NA19239_ch_T0000300;Name=LOC105379266
NA19239_chrY	CAT	exon	6864335	6865616	.	-	.	source_transcript=hg002_chrY_paternal_147.1;source_transcript_name=hg002_chrY_paternal_147.1;source_gene=hg002_chrY_paternal_147;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_147;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_147.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_147.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_147.1;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000300;gene_id=NA19239_ch_G0000108;Parent=NA19239_ch_T0000300;transcript_name=hg002_chrY_paternal_147.1;gene_name=LOC105379266;ID=exon:NA19239_ch_T0000300:0;Name=LOC105379266;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6865617	6866301	.	-	.	source_transcript=hg002_chrY_paternal_147.1;source_transcript_name=hg002_chrY_paternal_147.1;source_gene=hg002_chrY_paternal_147;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_147;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_147.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_147.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_147.1;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000300;gene_id=NA19239_ch_G0000108;Parent=NA19239_ch_T0000300;transcript_name=hg002_chrY_paternal_147.1;gene_name=LOC105379266;ID=intron:NA19239_ch_T0000300:0;Name=LOC105379266;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6866302	6866586	.	-	.	source_transcript=hg002_chrY_paternal_147.1;source_transcript_name=hg002_chrY_paternal_147.1;source_gene=hg002_chrY_paternal_147;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_147;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_147.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_147.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_147.1;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000300;gene_id=NA19239_ch_G0000108;Parent=NA19239_ch_T0000300;transcript_name=hg002_chrY_paternal_147.1;gene_name=LOC105379266;ID=exon:NA19239_ch_T0000300:1;Name=LOC105379266;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6872620	6881166	.	-	.	source_gene_common_name=LOC105379265;source_gene=hg002_chrY_paternal_146;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;gene_id=NA19239_ch_G0000109;gene_biotype=lncRNA;gene_name=LOC105379265;gene_sources=liftoff;ID=NA19239_ch_G0000109;Name=LOC105379265
NA19239_chrY	CAT	transcript	6872620	6881166	1000	-	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=NA19239_ch_T0000301;gene_id=NA19239_ch_G0000109;Parent=NA19239_ch_G0000109;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=NA19239_ch_T0000301;Name=LOC105379265
NA19239_chrY	CAT	exon	6872620	6872748	.	-	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=NA19239_ch_T0000301;gene_id=NA19239_ch_G0000109;Parent=NA19239_ch_T0000301;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=exon:NA19239_ch_T0000301:0;Name=LOC105379265;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6872749	6877129	.	-	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=NA19239_ch_T0000301;gene_id=NA19239_ch_G0000109;Parent=NA19239_ch_T0000301;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=intron:NA19239_ch_T0000301:0;Name=LOC105379265;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6877130	6877216	.	-	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=NA19239_ch_T0000301;gene_id=NA19239_ch_G0000109;Parent=NA19239_ch_T0000301;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=exon:NA19239_ch_T0000301:1;Name=LOC105379265;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6877217	6879360	.	-	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=NA19239_ch_T0000301;gene_id=NA19239_ch_G0000109;Parent=NA19239_ch_T0000301;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=intron:NA19239_ch_T0000301:1;Name=LOC105379265;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6879361	6879502	.	-	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=NA19239_ch_T0000301;gene_id=NA19239_ch_G0000109;Parent=NA19239_ch_T0000301;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=exon:NA19239_ch_T0000301:2;Name=LOC105379265;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6879503	6880610	.	-	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=NA19239_ch_T0000301;gene_id=NA19239_ch_G0000109;Parent=NA19239_ch_T0000301;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=intron:NA19239_ch_T0000301:2;Name=LOC105379265;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6880611	6881166	.	-	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=NA19239_ch_T0000301;gene_id=NA19239_ch_G0000109;Parent=NA19239_ch_T0000301;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=exon:NA19239_ch_T0000301:3;Name=LOC105379265;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	6885855	6890719	.	-	.	source_gene_common_name=LOC105379264;source_gene=hg002_chrY_paternal_145;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;gene_id=NA19239_ch_G0000110;gene_biotype=lncRNA;gene_name=LOC105379264;gene_sources=liftoff;ID=NA19239_ch_G0000110;Name=LOC105379264
NA19239_chrY	CAT	transcript	6885855	6890719	1000	-	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=NA19239_ch_T0000302;gene_id=NA19239_ch_G0000110;Parent=NA19239_ch_G0000110;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=NA19239_ch_T0000302;Name=LOC105379264
NA19239_chrY	CAT	exon	6885855	6885938	.	-	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=NA19239_ch_T0000302;gene_id=NA19239_ch_G0000110;Parent=NA19239_ch_T0000302;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=exon:NA19239_ch_T0000302:0;Name=LOC105379264;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6885939	6888247	.	-	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=NA19239_ch_T0000302;gene_id=NA19239_ch_G0000110;Parent=NA19239_ch_T0000302;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=intron:NA19239_ch_T0000302:0;Name=LOC105379264;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6888248	6888323	.	-	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=NA19239_ch_T0000302;gene_id=NA19239_ch_G0000110;Parent=NA19239_ch_T0000302;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=exon:NA19239_ch_T0000302:1;Name=LOC105379264;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6888324	6890385	.	-	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=NA19239_ch_T0000302;gene_id=NA19239_ch_G0000110;Parent=NA19239_ch_T0000302;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=intron:NA19239_ch_T0000302:1;Name=LOC105379264;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6890386	6890490	.	-	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=NA19239_ch_T0000302;gene_id=NA19239_ch_G0000110;Parent=NA19239_ch_T0000302;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=exon:NA19239_ch_T0000302:2;Name=LOC105379264;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	6890491	6890644	.	-	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=NA19239_ch_T0000302;gene_id=NA19239_ch_G0000110;Parent=NA19239_ch_T0000302;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=intron:NA19239_ch_T0000302:2;Name=LOC105379264;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	6890645	6890719	.	-	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=NA19239_ch_T0000302;gene_id=NA19239_ch_G0000110;Parent=NA19239_ch_T0000302;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=exon:NA19239_ch_T0000302:3;Name=LOC105379264;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	7288265	7322332	.	+	.	source_gene_common_name=TTTY11;source_gene=hg002_chrY_paternal_136;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;gene_id=NA19239_ch_G0000111;gene_biotype=lncRNA;gene_name=TTTY11;gene_sources=liftoff;ID=NA19239_ch_G0000111;Name=TTTY11
NA19239_chrY	CAT	transcript	7288265	7322332	1000	+	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=NA19239_ch_T0000303;gene_id=NA19239_ch_G0000111;Parent=NA19239_ch_G0000111;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=NA19239_ch_T0000303;Name=TTTY11
NA19239_chrY	CAT	exon	7288265	7288301	.	+	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=NA19239_ch_T0000303;gene_id=NA19239_ch_G0000111;Parent=NA19239_ch_T0000303;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:NA19239_ch_T0000303:0;Name=TTTY11;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	7288302	7310700	.	+	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=NA19239_ch_T0000303;gene_id=NA19239_ch_G0000111;Parent=NA19239_ch_T0000303;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=intron:NA19239_ch_T0000303:0;Name=TTTY11;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	7310701	7310784	.	+	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=NA19239_ch_T0000303;gene_id=NA19239_ch_G0000111;Parent=NA19239_ch_T0000303;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:NA19239_ch_T0000303:1;Name=TTTY11;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	7310785	7316342	.	+	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=NA19239_ch_T0000303;gene_id=NA19239_ch_G0000111;Parent=NA19239_ch_T0000303;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=intron:NA19239_ch_T0000303:1;Name=TTTY11;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	7316343	7316645	.	+	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=NA19239_ch_T0000303;gene_id=NA19239_ch_G0000111;Parent=NA19239_ch_T0000303;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:NA19239_ch_T0000303:2;Name=TTTY11;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	7316646	7321441	.	+	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=NA19239_ch_T0000303;gene_id=NA19239_ch_G0000111;Parent=NA19239_ch_T0000303;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=intron:NA19239_ch_T0000303:2;Name=TTTY11;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	7321442	7321757	.	+	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=NA19239_ch_T0000303;gene_id=NA19239_ch_G0000111;Parent=NA19239_ch_T0000303;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:NA19239_ch_T0000303:3;Name=TTTY11;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	7321758	7322238	.	+	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=NA19239_ch_T0000303;gene_id=NA19239_ch_G0000111;Parent=NA19239_ch_T0000303;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=intron:NA19239_ch_T0000303:3;Name=TTTY11;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	7322239	7322332	.	+	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=NA19239_ch_T0000303;gene_id=NA19239_ch_G0000111;Parent=NA19239_ch_T0000303;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:NA19239_ch_T0000303:4;Name=TTTY11;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	7381370	7383855	.	+	.	source_gene_common_name=LOC105377235;source_gene=hg002_chrY_paternal_135;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;gene_id=NA19239_ch_G0000112;gene_biotype=lncRNA;gene_name=LOC105377235;gene_sources=liftoff;ID=NA19239_ch_G0000112;Name=LOC105377235
NA19239_chrY	CAT	transcript	7381370	7383855	1000	+	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=NA19239_ch_T0000304;gene_id=NA19239_ch_G0000112;Parent=NA19239_ch_G0000112;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=NA19239_ch_T0000304;Name=LOC105377235
NA19239_chrY	CAT	exon	7381370	7381557	.	+	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=NA19239_ch_T0000304;gene_id=NA19239_ch_G0000112;Parent=NA19239_ch_T0000304;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=exon:NA19239_ch_T0000304:0;Name=LOC105377235;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	7381558	7383025	.	+	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=NA19239_ch_T0000304;gene_id=NA19239_ch_G0000112;Parent=NA19239_ch_T0000304;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=intron:NA19239_ch_T0000304:0;Name=LOC105377235;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	7383026	7383288	.	+	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=NA19239_ch_T0000304;gene_id=NA19239_ch_G0000112;Parent=NA19239_ch_T0000304;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=exon:NA19239_ch_T0000304:1;Name=LOC105377235;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	7383289	7383378	.	+	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=NA19239_ch_T0000304;gene_id=NA19239_ch_G0000112;Parent=NA19239_ch_T0000304;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=intron:NA19239_ch_T0000304:1;Name=LOC105377235;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	7383379	7383474	.	+	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=NA19239_ch_T0000304;gene_id=NA19239_ch_G0000112;Parent=NA19239_ch_T0000304;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=exon:NA19239_ch_T0000304:2;Name=LOC105377235;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	7383475	7383571	.	+	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=NA19239_ch_T0000304;gene_id=NA19239_ch_G0000112;Parent=NA19239_ch_T0000304;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=intron:NA19239_ch_T0000304:2;Name=LOC105377235;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	7383572	7383855	.	+	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=NA19239_ch_T0000304;gene_id=NA19239_ch_G0000112;Parent=NA19239_ch_T0000304;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=exon:NA19239_ch_T0000304:3;Name=LOC105377235;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	7400381	7401192	.	-	.	source_gene_common_name=TTTY19;source_gene=hg002_chrY_paternal_134;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;gene_id=NA19239_ch_G0000113;gene_biotype=lncRNA;gene_name=TTTY19;gene_sources=liftoff;ID=NA19239_ch_G0000113;Name=TTTY19
NA19239_chrY	CAT	transcript	7400381	7401192	1000	-	.	source_transcript=hg002_chrY_paternal_134.1;source_transcript_name=hg002_chrY_paternal_134.1;source_gene=hg002_chrY_paternal_134;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_134;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_134.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_134.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;transcript_id=NA19239_ch_T0000305;gene_id=NA19239_ch_G0000113;Parent=NA19239_ch_G0000113;transcript_name=hg002_chrY_paternal_134.1;gene_name=TTTY19;ID=NA19239_ch_T0000305;Name=TTTY19
NA19239_chrY	CAT	exon	7400381	7400561	.	-	.	source_transcript=hg002_chrY_paternal_134.1;source_transcript_name=hg002_chrY_paternal_134.1;source_gene=hg002_chrY_paternal_134;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_134;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_134.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;transcript_id=NA19239_ch_T0000305;gene_id=NA19239_ch_G0000113;Parent=NA19239_ch_T0000305;transcript_name=hg002_chrY_paternal_134.1;gene_name=TTTY19;ID=exon:NA19239_ch_T0000305:0;Name=TTTY19;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	7400562	7401104	.	-	.	source_transcript=hg002_chrY_paternal_134.1;source_transcript_name=hg002_chrY_paternal_134.1;source_gene=hg002_chrY_paternal_134;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_134;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_134.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;transcript_id=NA19239_ch_T0000305;gene_id=NA19239_ch_G0000113;Parent=NA19239_ch_T0000305;transcript_name=hg002_chrY_paternal_134.1;gene_name=TTTY19;ID=intron:NA19239_ch_T0000305:0;Name=TTTY19;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	7401105	7401192	.	-	.	source_transcript=hg002_chrY_paternal_134.1;source_transcript_name=hg002_chrY_paternal_134.1;source_gene=hg002_chrY_paternal_134;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_134;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_134.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;transcript_id=NA19239_ch_T0000305;gene_id=NA19239_ch_G0000113;Parent=NA19239_ch_T0000305;transcript_name=hg002_chrY_paternal_134.1;gene_name=TTTY19;ID=exon:NA19239_ch_T0000305:1;Name=TTTY19;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	7410366	7411787	.	+	.	source_gene_common_name=LOC105377234;source_gene=hg002_chrY_paternal_133;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;gene_id=NA19239_ch_G0000114;gene_biotype=lncRNA;gene_name=LOC105377234;gene_sources=liftoff;ID=NA19239_ch_G0000114;Name=LOC105377234
NA19239_chrY	CAT	transcript	7410366	7411787	1000	+	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=NA19239_ch_T0000306;gene_id=NA19239_ch_G0000114;Parent=NA19239_ch_G0000114;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=NA19239_ch_T0000306;Name=LOC105377234
NA19239_chrY	CAT	exon	7410366	7410557	.	+	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=NA19239_ch_T0000306;gene_id=NA19239_ch_G0000114;Parent=NA19239_ch_T0000306;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=exon:NA19239_ch_T0000306:0;Name=LOC105377234;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	7410558	7411138	.	+	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=NA19239_ch_T0000306;gene_id=NA19239_ch_G0000114;Parent=NA19239_ch_T0000306;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=intron:NA19239_ch_T0000306:0;Name=LOC105377234;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	7411139	7411216	.	+	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=NA19239_ch_T0000306;gene_id=NA19239_ch_G0000114;Parent=NA19239_ch_T0000306;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=exon:NA19239_ch_T0000306:1;Name=LOC105377234;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	7411217	7411700	.	+	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=NA19239_ch_T0000306;gene_id=NA19239_ch_G0000114;Parent=NA19239_ch_T0000306;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=intron:NA19239_ch_T0000306:1;Name=LOC105377234;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	7411701	7411787	.	+	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=NA19239_ch_T0000306;gene_id=NA19239_ch_G0000114;Parent=NA19239_ch_T0000306;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=exon:NA19239_ch_T0000306:2;Name=LOC105377234;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	7421807	7422315	.	+	.	source_gene_common_name=TTTY18;source_gene=hg002_chrY_paternal_132;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;gene_id=NA19239_ch_G0000115;gene_biotype=lncRNA;gene_name=TTTY18;gene_sources=liftoff;ID=NA19239_ch_G0000115;Name=TTTY18
NA19239_chrY	CAT	transcript	7421807	7422315	1000	+	.	source_transcript=hg002_chrY_paternal_132.1;source_transcript_name=hg002_chrY_paternal_132.1;source_gene=hg002_chrY_paternal_132;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_132;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_132.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_132.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;transcript_id=NA19239_ch_T0000307;gene_id=NA19239_ch_G0000115;Parent=NA19239_ch_G0000115;transcript_name=hg002_chrY_paternal_132.1;gene_name=TTTY18;ID=NA19239_ch_T0000307;Name=TTTY18
NA19239_chrY	CAT	exon	7421807	7421964	.	+	.	source_transcript=hg002_chrY_paternal_132.1;source_transcript_name=hg002_chrY_paternal_132.1;source_gene=hg002_chrY_paternal_132;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_132;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_132.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;transcript_id=NA19239_ch_T0000307;gene_id=NA19239_ch_G0000115;Parent=NA19239_ch_T0000307;transcript_name=hg002_chrY_paternal_132.1;gene_name=TTTY18;ID=exon:NA19239_ch_T0000307:0;Name=TTTY18;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	7421965	7422252	.	+	.	source_transcript=hg002_chrY_paternal_132.1;source_transcript_name=hg002_chrY_paternal_132.1;source_gene=hg002_chrY_paternal_132;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_132;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_132.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;transcript_id=NA19239_ch_T0000307;gene_id=NA19239_ch_G0000115;Parent=NA19239_ch_T0000307;transcript_name=hg002_chrY_paternal_132.1;gene_name=TTTY18;ID=intron:NA19239_ch_T0000307:0;Name=TTTY18;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	7422253	7422315	.	+	.	source_transcript=hg002_chrY_paternal_132.1;source_transcript_name=hg002_chrY_paternal_132.1;source_gene=hg002_chrY_paternal_132;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_132;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_132.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;transcript_id=NA19239_ch_T0000307;gene_id=NA19239_ch_G0000115;Parent=NA19239_ch_T0000307;transcript_name=hg002_chrY_paternal_132.1;gene_name=TTTY18;ID=exon:NA19239_ch_T0000307:1;Name=TTTY18;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	7444802	7445643	.	-	.	source_gene_common_name=LOC107987340;source_gene=hg002_chrY_paternal_131;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;gene_id=NA19239_ch_G0000116;gene_biotype=lncRNA;gene_name=LOC107987340;gene_sources=liftoff;ID=NA19239_ch_G0000116;Name=LOC107987340
NA19239_chrY	CAT	transcript	7444802	7445643	1000	-	.	source_transcript=hg002_chrY_paternal_131.1;source_transcript_name=hg002_chrY_paternal_131.1;source_gene=hg002_chrY_paternal_131;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_131;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_131.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_131.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987340;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;transcript_id=NA19239_ch_T0000308;gene_id=NA19239_ch_G0000116;Parent=NA19239_ch_G0000116;transcript_name=hg002_chrY_paternal_131.1;gene_name=LOC107987340;ID=NA19239_ch_T0000308;Name=LOC107987340
NA19239_chrY	CAT	exon	7444802	7445186	.	-	.	source_transcript=hg002_chrY_paternal_131.1;source_transcript_name=hg002_chrY_paternal_131.1;source_gene=hg002_chrY_paternal_131;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_131;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_131.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987340;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;transcript_id=NA19239_ch_T0000308;gene_id=NA19239_ch_G0000116;Parent=NA19239_ch_T0000308;transcript_name=hg002_chrY_paternal_131.1;gene_name=LOC107987340;ID=exon:NA19239_ch_T0000308:0;Name=LOC107987340;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	7445187	7445521	.	-	.	source_transcript=hg002_chrY_paternal_131.1;source_transcript_name=hg002_chrY_paternal_131.1;source_gene=hg002_chrY_paternal_131;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_131;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_131.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987340;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;transcript_id=NA19239_ch_T0000308;gene_id=NA19239_ch_G0000116;Parent=NA19239_ch_T0000308;transcript_name=hg002_chrY_paternal_131.1;gene_name=LOC107987340;ID=intron:NA19239_ch_T0000308:0;Name=LOC107987340;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	7445522	7445643	.	-	.	source_transcript=hg002_chrY_paternal_131.1;source_transcript_name=hg002_chrY_paternal_131.1;source_gene=hg002_chrY_paternal_131;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_131;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_131.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987340;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;transcript_id=NA19239_ch_T0000308;gene_id=NA19239_ch_G0000116;Parent=NA19239_ch_T0000308;transcript_name=hg002_chrY_paternal_131.1;gene_name=LOC107987340;ID=exon:NA19239_ch_T0000308:1;Name=LOC107987340;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	7460556	7467391	.	-	.	source_gene_common_name=LINC00279;source_gene=hg002_chrY_paternal_130;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;gene_id=NA19239_ch_G0000117;gene_biotype=lncRNA;gene_name=LINC00279;gene_sources=liftoff;ID=NA19239_ch_G0000117;Name=LINC00279
NA19239_chrY	CAT	transcript	7460556	7467391	1000	-	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=NA19239_ch_T0000309;gene_id=NA19239_ch_G0000117;Parent=NA19239_ch_G0000117;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=NA19239_ch_T0000309;Name=LINC00279
NA19239_chrY	CAT	exon	7460556	7460631	.	-	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=NA19239_ch_T0000309;gene_id=NA19239_ch_G0000117;Parent=NA19239_ch_T0000309;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=exon:NA19239_ch_T0000309:0;Name=LINC00279;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	7460632	7460763	.	-	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=NA19239_ch_T0000309;gene_id=NA19239_ch_G0000117;Parent=NA19239_ch_T0000309;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=intron:NA19239_ch_T0000309:0;Name=LINC00279;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	7460764	7461006	.	-	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=NA19239_ch_T0000309;gene_id=NA19239_ch_G0000117;Parent=NA19239_ch_T0000309;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=exon:NA19239_ch_T0000309:1;Name=LINC00279;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	7461007	7461357	.	-	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=NA19239_ch_T0000309;gene_id=NA19239_ch_G0000117;Parent=NA19239_ch_T0000309;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=intron:NA19239_ch_T0000309:1;Name=LINC00279;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	7461358	7461553	.	-	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=NA19239_ch_T0000309;gene_id=NA19239_ch_G0000117;Parent=NA19239_ch_T0000309;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=exon:NA19239_ch_T0000309:2;Name=LINC00279;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	7461554	7467278	.	-	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=NA19239_ch_T0000309;gene_id=NA19239_ch_G0000117;Parent=NA19239_ch_T0000309;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=intron:NA19239_ch_T0000309:2;Name=LINC00279;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	7467279	7467391	.	-	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=NA19239_ch_T0000309;gene_id=NA19239_ch_G0000117;Parent=NA19239_ch_T0000309;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=exon:NA19239_ch_T0000309:3;Name=LINC00279;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	7543687	7545174	.	+	.	source_gene_common_name=LOC107987354;source_gene=hg002_chrY_paternal_129;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;gene_id=NA19239_ch_G0000118;gene_biotype=lncRNA;gene_name=LOC107987354;gene_sources=liftoff;ID=NA19239_ch_G0000118;Name=LOC107987354
NA19239_chrY	CAT	transcript	7543687	7545174	1000	+	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=NA19239_ch_T0000310;gene_id=NA19239_ch_G0000118;Parent=NA19239_ch_G0000118;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=NA19239_ch_T0000310;Name=LOC107987354
NA19239_chrY	CAT	exon	7543687	7543824	.	+	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=NA19239_ch_T0000310;gene_id=NA19239_ch_G0000118;Parent=NA19239_ch_T0000310;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=exon:NA19239_ch_T0000310:0;Name=LOC107987354;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	7543825	7544788	.	+	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=NA19239_ch_T0000310;gene_id=NA19239_ch_G0000118;Parent=NA19239_ch_T0000310;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=intron:NA19239_ch_T0000310:0;Name=LOC107987354;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	7544789	7544863	.	+	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=NA19239_ch_T0000310;gene_id=NA19239_ch_G0000118;Parent=NA19239_ch_T0000310;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=exon:NA19239_ch_T0000310:1;Name=LOC107987354;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	7544864	7545015	.	+	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=NA19239_ch_T0000310;gene_id=NA19239_ch_G0000118;Parent=NA19239_ch_T0000310;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=intron:NA19239_ch_T0000310:1;Name=LOC107987354;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	7545016	7545174	.	+	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=NA19239_ch_T0000310;gene_id=NA19239_ch_G0000118;Parent=NA19239_ch_T0000310;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=exon:NA19239_ch_T0000310:2;Name=LOC107987354;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	7554650	7556861	.	+	.	source_gene_common_name=LOC105377232;source_gene=hg002_chrY_paternal_128;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;gene_id=NA19239_ch_G0000119;gene_biotype=lncRNA;gene_name=LOC105377232;gene_sources=liftoff;ID=NA19239_ch_G0000119;Name=LOC105377232
NA19239_chrY	CAT	transcript	7554650	7556861	1000	+	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=NA19239_ch_T0000311;gene_id=NA19239_ch_G0000119;Parent=NA19239_ch_G0000119;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=NA19239_ch_T0000311;Name=LOC105377232
NA19239_chrY	CAT	exon	7554650	7554663	.	+	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=NA19239_ch_T0000311;gene_id=NA19239_ch_G0000119;Parent=NA19239_ch_T0000311;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=exon:NA19239_ch_T0000311:0;Name=LOC105377232;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	7554664	7556085	.	+	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=NA19239_ch_T0000311;gene_id=NA19239_ch_G0000119;Parent=NA19239_ch_T0000311;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=intron:NA19239_ch_T0000311:0;Name=LOC105377232;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	7556086	7556160	.	+	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=NA19239_ch_T0000311;gene_id=NA19239_ch_G0000119;Parent=NA19239_ch_T0000311;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=exon:NA19239_ch_T0000311:1;Name=LOC105377232;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	7556161	7556846	.	+	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=NA19239_ch_T0000311;gene_id=NA19239_ch_G0000119;Parent=NA19239_ch_T0000311;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=intron:NA19239_ch_T0000311:1;Name=LOC105377232;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	7556847	7556861	.	+	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=NA19239_ch_T0000311;gene_id=NA19239_ch_G0000119;Parent=NA19239_ch_T0000311;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=exon:NA19239_ch_T0000311:2;Name=LOC105377232;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	7698618	7710885	.	-	.	source_gene_common_name=LOC105377231;source_gene=hg002_chrY_paternal_124;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;gene_id=NA19239_ch_G0000120;gene_biotype=lncRNA;gene_name=LOC105377231;gene_sources=liftoff;ID=NA19239_ch_G0000120;Name=LOC105377231
NA19239_chrY	CAT	transcript	7698618	7710885	1000	-	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=NA19239_ch_T0000312;gene_id=NA19239_ch_G0000120;Parent=NA19239_ch_G0000120;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=NA19239_ch_T0000312;Name=LOC105377231
NA19239_chrY	CAT	exon	7698618	7698805	.	-	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=NA19239_ch_T0000312;gene_id=NA19239_ch_G0000120;Parent=NA19239_ch_T0000312;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:NA19239_ch_T0000312:0;Name=LOC105377231;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	7698806	7702097	.	-	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=NA19239_ch_T0000312;gene_id=NA19239_ch_G0000120;Parent=NA19239_ch_T0000312;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:NA19239_ch_T0000312:0;Name=LOC105377231;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	7702098	7702250	.	-	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=NA19239_ch_T0000312;gene_id=NA19239_ch_G0000120;Parent=NA19239_ch_T0000312;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:NA19239_ch_T0000312:1;Name=LOC105377231;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	7702251	7702951	.	-	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=NA19239_ch_T0000312;gene_id=NA19239_ch_G0000120;Parent=NA19239_ch_T0000312;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:NA19239_ch_T0000312:1;Name=LOC105377231;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	7702952	7703205	.	-	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=NA19239_ch_T0000312;gene_id=NA19239_ch_G0000120;Parent=NA19239_ch_T0000312;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:NA19239_ch_T0000312:2;Name=LOC105377231;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	7703206	7710799	.	-	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=NA19239_ch_T0000312;gene_id=NA19239_ch_G0000120;Parent=NA19239_ch_T0000312;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:NA19239_ch_T0000312:2;Name=LOC105377231;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	7710800	7710885	.	-	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=NA19239_ch_T0000312;gene_id=NA19239_ch_G0000120;Parent=NA19239_ch_T0000312;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:NA19239_ch_T0000312:3;Name=LOC105377231;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	7698618	7710885	1000	-	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=NA19239_ch_T0000313;gene_id=NA19239_ch_G0000120;Parent=NA19239_ch_G0000120;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=NA19239_ch_T0000313;Name=LOC105377231
NA19239_chrY	CAT	exon	7698618	7698805	.	-	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=NA19239_ch_T0000313;gene_id=NA19239_ch_G0000120;Parent=NA19239_ch_T0000313;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:NA19239_ch_T0000313:0;Name=LOC105377231;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	7698806	7702097	.	-	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=NA19239_ch_T0000313;gene_id=NA19239_ch_G0000120;Parent=NA19239_ch_T0000313;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:NA19239_ch_T0000313:0;Name=LOC105377231;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	7702098	7702250	.	-	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=NA19239_ch_T0000313;gene_id=NA19239_ch_G0000120;Parent=NA19239_ch_T0000313;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:NA19239_ch_T0000313:1;Name=LOC105377231;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	7702251	7702961	.	-	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=NA19239_ch_T0000313;gene_id=NA19239_ch_G0000120;Parent=NA19239_ch_T0000313;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:NA19239_ch_T0000313:1;Name=LOC105377231;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	7702962	7703205	.	-	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=NA19239_ch_T0000313;gene_id=NA19239_ch_G0000120;Parent=NA19239_ch_T0000313;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:NA19239_ch_T0000313:2;Name=LOC105377231;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	7703206	7710799	.	-	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=NA19239_ch_T0000313;gene_id=NA19239_ch_G0000120;Parent=NA19239_ch_T0000313;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:NA19239_ch_T0000313:2;Name=LOC105377231;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	7710800	7710885	.	-	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=NA19239_ch_T0000313;gene_id=NA19239_ch_G0000120;Parent=NA19239_ch_T0000313;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:NA19239_ch_T0000313:3;Name=LOC105377231;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	8247206	8275151	.	+	.	source_gene_common_name=LOC105377229;source_gene=hg002_chrY_paternal_105;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;gene_id=NA19239_ch_G0000121;gene_biotype=lncRNA;gene_name=LOC105377229;gene_sources=liftoff;ID=NA19239_ch_G0000121;Name=LOC105377229
NA19239_chrY	CAT	transcript	8247206	8275151	1000	+	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=NA19239_ch_T0000314;gene_id=NA19239_ch_G0000121;Parent=NA19239_ch_G0000121;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=NA19239_ch_T0000314;Name=LOC105377229
NA19239_chrY	CAT	exon	8247206	8247274	.	+	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=NA19239_ch_T0000314;gene_id=NA19239_ch_G0000121;Parent=NA19239_ch_T0000314;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=exon:NA19239_ch_T0000314:0;Name=LOC105377229;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	8247275	8272863	.	+	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=NA19239_ch_T0000314;gene_id=NA19239_ch_G0000121;Parent=NA19239_ch_T0000314;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=intron:NA19239_ch_T0000314:0;Name=LOC105377229;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	8272864	8272988	.	+	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=NA19239_ch_T0000314;gene_id=NA19239_ch_G0000121;Parent=NA19239_ch_T0000314;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=exon:NA19239_ch_T0000314:1;Name=LOC105377229;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	8272989	8273556	.	+	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=NA19239_ch_T0000314;gene_id=NA19239_ch_G0000121;Parent=NA19239_ch_T0000314;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=intron:NA19239_ch_T0000314:1;Name=LOC105377229;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	8273557	8273728	.	+	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=NA19239_ch_T0000314;gene_id=NA19239_ch_G0000121;Parent=NA19239_ch_T0000314;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=exon:NA19239_ch_T0000314:2;Name=LOC105377229;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	8273729	8273875	.	+	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=NA19239_ch_T0000314;gene_id=NA19239_ch_G0000121;Parent=NA19239_ch_T0000314;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=intron:NA19239_ch_T0000314:2;Name=LOC105377229;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	8273876	8275151	.	+	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=NA19239_ch_T0000314;gene_id=NA19239_ch_G0000121;Parent=NA19239_ch_T0000314;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=exon:NA19239_ch_T0000314:3;Name=LOC105377229;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	8295283	8301951	.	-	.	source_gene_common_name=TTTY12;source_gene=hg002_chrY_paternal_104;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;gene_id=NA19239_ch_G0000122;gene_biotype=lncRNA;gene_name=TTTY12;gene_sources=liftoff;ID=NA19239_ch_G0000122;Name=TTTY12
NA19239_chrY	CAT	transcript	8295283	8301951	1000	-	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=NA19239_ch_T0000315;gene_id=NA19239_ch_G0000122;Parent=NA19239_ch_G0000122;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=NA19239_ch_T0000315;Name=TTTY12
NA19239_chrY	CAT	exon	8295283	8296105	.	-	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=NA19239_ch_T0000315;gene_id=NA19239_ch_G0000122;Parent=NA19239_ch_T0000315;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:NA19239_ch_T0000315:0;Name=TTTY12;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	8296106	8300886	.	-	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=NA19239_ch_T0000315;gene_id=NA19239_ch_G0000122;Parent=NA19239_ch_T0000315;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:NA19239_ch_T0000315:0;Name=TTTY12;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	8300887	8301042	.	-	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=NA19239_ch_T0000315;gene_id=NA19239_ch_G0000122;Parent=NA19239_ch_T0000315;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:NA19239_ch_T0000315:1;Name=TTTY12;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	8301043	8301903	.	-	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=NA19239_ch_T0000315;gene_id=NA19239_ch_G0000122;Parent=NA19239_ch_T0000315;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:NA19239_ch_T0000315:1;Name=TTTY12;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	8301904	8301951	.	-	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=NA19239_ch_T0000315;gene_id=NA19239_ch_G0000122;Parent=NA19239_ch_T0000315;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:NA19239_ch_T0000315:2;Name=TTTY12;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	8295283	8301951	1000	-	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=NA19239_ch_T0000316;gene_id=NA19239_ch_G0000122;Parent=NA19239_ch_G0000122;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=NA19239_ch_T0000316;Name=TTTY12
NA19239_chrY	CAT	exon	8295283	8296105	.	-	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=NA19239_ch_T0000316;gene_id=NA19239_ch_G0000122;Parent=NA19239_ch_T0000316;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:NA19239_ch_T0000316:0;Name=TTTY12;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	8296106	8300340	.	-	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=NA19239_ch_T0000316;gene_id=NA19239_ch_G0000122;Parent=NA19239_ch_T0000316;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:NA19239_ch_T0000316:0;Name=TTTY12;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	8300341	8300422	.	-	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=NA19239_ch_T0000316;gene_id=NA19239_ch_G0000122;Parent=NA19239_ch_T0000316;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:NA19239_ch_T0000316:1;Name=TTTY12;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	8300423	8300886	.	-	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=NA19239_ch_T0000316;gene_id=NA19239_ch_G0000122;Parent=NA19239_ch_T0000316;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:NA19239_ch_T0000316:1;Name=TTTY12;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	8300887	8301042	.	-	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=NA19239_ch_T0000316;gene_id=NA19239_ch_G0000122;Parent=NA19239_ch_T0000316;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:NA19239_ch_T0000316:2;Name=TTTY12;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	8301043	8301903	.	-	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=NA19239_ch_T0000316;gene_id=NA19239_ch_G0000122;Parent=NA19239_ch_T0000316;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:NA19239_ch_T0000316:2;Name=TTTY12;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	8301904	8301951	.	-	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=NA19239_ch_T0000316;gene_id=NA19239_ch_G0000122;Parent=NA19239_ch_T0000316;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:NA19239_ch_T0000316:3;Name=TTTY12;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	8296096	8326503	.	+	.	source_gene_common_name=LOC107987339;source_gene=hg002_chrY_paternal_103;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;gene_id=NA19239_ch_G0000123;gene_biotype=lncRNA;gene_name=LOC107987339;gene_sources=liftoff;ID=NA19239_ch_G0000123;Name=LOC107987339
NA19239_chrY	CAT	transcript	8296096	8326503	1000	+	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=NA19239_ch_T0000317;gene_id=NA19239_ch_G0000123;Parent=NA19239_ch_G0000123;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=NA19239_ch_T0000317;Name=LOC107987339
NA19239_chrY	CAT	exon	8296096	8296812	.	+	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=NA19239_ch_T0000317;gene_id=NA19239_ch_G0000123;Parent=NA19239_ch_T0000317;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=exon:NA19239_ch_T0000317:0;Name=LOC107987339;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	8296813	8300361	.	+	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=NA19239_ch_T0000317;gene_id=NA19239_ch_G0000123;Parent=NA19239_ch_T0000317;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=intron:NA19239_ch_T0000317:0;Name=LOC107987339;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	8300362	8300471	.	+	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=NA19239_ch_T0000317;gene_id=NA19239_ch_G0000123;Parent=NA19239_ch_T0000317;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=exon:NA19239_ch_T0000317:1;Name=LOC107987339;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	8300472	8326455	.	+	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=NA19239_ch_T0000317;gene_id=NA19239_ch_G0000123;Parent=NA19239_ch_T0000317;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=intron:NA19239_ch_T0000317:1;Name=LOC107987339;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	8326456	8326503	.	+	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=NA19239_ch_T0000317;gene_id=NA19239_ch_G0000123;Parent=NA19239_ch_T0000317;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=exon:NA19239_ch_T0000317:2;Name=LOC107987339;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	8408018	8409908	.	+	.	source_gene_common_name=TTTY16;source_gene=hg002_chrY_paternal_101;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;gene_id=NA19239_ch_G0000124;gene_biotype=lncRNA;gene_name=TTTY16;gene_sources=liftoff;ID=NA19239_ch_G0000124;Name=TTTY16
NA19239_chrY	CAT	transcript	8408018	8409908	1000	+	.	source_transcript=hg002_chrY_paternal_101.1;source_transcript_name=hg002_chrY_paternal_101.1;source_gene=hg002_chrY_paternal_101;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_101;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_101.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_101.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;transcript_id=NA19239_ch_T0000318;gene_id=NA19239_ch_G0000124;Parent=NA19239_ch_G0000124;transcript_name=hg002_chrY_paternal_101.1;gene_name=TTTY16;ID=NA19239_ch_T0000318;Name=TTTY16
NA19239_chrY	CAT	exon	8408018	8408078	.	+	.	source_transcript=hg002_chrY_paternal_101.1;source_transcript_name=hg002_chrY_paternal_101.1;source_gene=hg002_chrY_paternal_101;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_101;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_101.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_101.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;transcript_id=NA19239_ch_T0000318;gene_id=NA19239_ch_G0000124;Parent=NA19239_ch_T0000318;transcript_name=hg002_chrY_paternal_101.1;gene_name=TTTY16;ID=exon:NA19239_ch_T0000318:0;Name=TTTY16;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	8408079	8409777	.	+	.	source_transcript=hg002_chrY_paternal_101.1;source_transcript_name=hg002_chrY_paternal_101.1;source_gene=hg002_chrY_paternal_101;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_101;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_101.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_101.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;transcript_id=NA19239_ch_T0000318;gene_id=NA19239_ch_G0000124;Parent=NA19239_ch_T0000318;transcript_name=hg002_chrY_paternal_101.1;gene_name=TTTY16;ID=intron:NA19239_ch_T0000318:0;Name=TTTY16;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	8409778	8409908	.	+	.	source_transcript=hg002_chrY_paternal_101.1;source_transcript_name=hg002_chrY_paternal_101.1;source_gene=hg002_chrY_paternal_101;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_101;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_101.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_101.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;transcript_id=NA19239_ch_T0000318;gene_id=NA19239_ch_G0000124;Parent=NA19239_ch_T0000318;transcript_name=hg002_chrY_paternal_101.1;gene_name=TTTY16;ID=exon:NA19239_ch_T0000318:1;Name=TTTY16;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	8589274	8651314	.	-	.	source_gene_common_name=LOC107987338;source_gene=hg002_chrY_paternal_97;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;gene_id=NA19239_ch_G0000125;gene_biotype=lncRNA;gene_name=LOC107987338;gene_sources=liftoff;ID=NA19239_ch_G0000125;Name=LOC107987338
NA19239_chrY	CAT	transcript	8589274	8651314	1000	-	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=NA19239_ch_T0000319;gene_id=NA19239_ch_G0000125;Parent=NA19239_ch_G0000125;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=NA19239_ch_T0000319;Name=LOC107987338
NA19239_chrY	CAT	exon	8589274	8589789	.	-	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=NA19239_ch_T0000319;gene_id=NA19239_ch_G0000125;Parent=NA19239_ch_T0000319;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=exon:NA19239_ch_T0000319:0;Name=LOC107987338;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	8589790	8590820	.	-	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=NA19239_ch_T0000319;gene_id=NA19239_ch_G0000125;Parent=NA19239_ch_T0000319;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=intron:NA19239_ch_T0000319:0;Name=LOC107987338;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	8590821	8590929	.	-	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=NA19239_ch_T0000319;gene_id=NA19239_ch_G0000125;Parent=NA19239_ch_T0000319;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=exon:NA19239_ch_T0000319:1;Name=LOC107987338;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	8590930	8608725	.	-	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=NA19239_ch_T0000319;gene_id=NA19239_ch_G0000125;Parent=NA19239_ch_T0000319;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=intron:NA19239_ch_T0000319:1;Name=LOC107987338;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	8608726	8608884	.	-	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=NA19239_ch_T0000319;gene_id=NA19239_ch_G0000125;Parent=NA19239_ch_T0000319;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=exon:NA19239_ch_T0000319:2;Name=LOC107987338;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	8608885	8651200	.	-	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=NA19239_ch_T0000319;gene_id=NA19239_ch_G0000125;Parent=NA19239_ch_T0000319;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=intron:NA19239_ch_T0000319:2;Name=LOC107987338;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	8651201	8651314	.	-	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=NA19239_ch_T0000319;gene_id=NA19239_ch_G0000125;Parent=NA19239_ch_T0000319;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=exon:NA19239_ch_T0000319:3;Name=LOC107987338;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	8728355	8835930	.	-	.	source_gene_common_name=PRKY;source_gene=hg002_chrY_paternal_93;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;gene_id=NA19239_ch_G0000126;gene_biotype=transcribed_pseudogene;gene_name=PRKY;gene_sources=liftoff;ID=NA19239_ch_G0000126;Name=PRKY
NA19239_chrY	CAT	transcript	8728355	8835930	1000	-	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=NA19239_ch_T0000320;gene_id=NA19239_ch_G0000126;Parent=NA19239_ch_G0000126;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=NA19239_ch_T0000320;Name=PRKY
NA19239_chrY	CAT	exon	8728355	8734190	.	-	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=NA19239_ch_T0000320;gene_id=NA19239_ch_G0000126;Parent=NA19239_ch_T0000320;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:NA19239_ch_T0000320:0;Name=PRKY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	8734191	8738012	.	-	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=NA19239_ch_T0000320;gene_id=NA19239_ch_G0000126;Parent=NA19239_ch_T0000320;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:NA19239_ch_T0000320:0;Name=PRKY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	8738013	8738159	.	-	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=NA19239_ch_T0000320;gene_id=NA19239_ch_G0000126;Parent=NA19239_ch_T0000320;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:NA19239_ch_T0000320:1;Name=PRKY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	8738160	8742469	.	-	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=NA19239_ch_T0000320;gene_id=NA19239_ch_G0000126;Parent=NA19239_ch_T0000320;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:NA19239_ch_T0000320:1;Name=PRKY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	8742470	8742547	.	-	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=NA19239_ch_T0000320;gene_id=NA19239_ch_G0000126;Parent=NA19239_ch_T0000320;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:NA19239_ch_T0000320:2;Name=PRKY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	8742548	8753671	.	-	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=NA19239_ch_T0000320;gene_id=NA19239_ch_G0000126;Parent=NA19239_ch_T0000320;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:NA19239_ch_T0000320:2;Name=PRKY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	8753672	8753767	.	-	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=NA19239_ch_T0000320;gene_id=NA19239_ch_G0000126;Parent=NA19239_ch_T0000320;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:NA19239_ch_T0000320:3;Name=PRKY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	8753768	8768664	.	-	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=NA19239_ch_T0000320;gene_id=NA19239_ch_G0000126;Parent=NA19239_ch_T0000320;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:NA19239_ch_T0000320:3;Name=PRKY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	8768665	8768784	.	-	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=NA19239_ch_T0000320;gene_id=NA19239_ch_G0000126;Parent=NA19239_ch_T0000320;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:NA19239_ch_T0000320:4;Name=PRKY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	8768785	8783731	.	-	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=NA19239_ch_T0000320;gene_id=NA19239_ch_G0000126;Parent=NA19239_ch_T0000320;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:NA19239_ch_T0000320:4;Name=PRKY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	8783732	8783995	.	-	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=NA19239_ch_T0000320;gene_id=NA19239_ch_G0000126;Parent=NA19239_ch_T0000320;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:NA19239_ch_T0000320:5;Name=PRKY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	8783996	8805795	.	-	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=NA19239_ch_T0000320;gene_id=NA19239_ch_G0000126;Parent=NA19239_ch_T0000320;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:NA19239_ch_T0000320:5;Name=PRKY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	8805796	8805964	.	-	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=NA19239_ch_T0000320;gene_id=NA19239_ch_G0000126;Parent=NA19239_ch_T0000320;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:NA19239_ch_T0000320:6;Name=PRKY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	8805965	8835423	.	-	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=NA19239_ch_T0000320;gene_id=NA19239_ch_G0000126;Parent=NA19239_ch_T0000320;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:NA19239_ch_T0000320:6;Name=PRKY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	8835424	8835930	.	-	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=NA19239_ch_T0000320;gene_id=NA19239_ch_G0000126;Parent=NA19239_ch_T0000320;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:NA19239_ch_T0000320:7;Name=PRKY;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	9004549	9200366	.	-	.	source_gene_common_name=TBL1Y;source_gene=hg002_chrY_paternal_90;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;gene_id=NA19239_ch_G0000127;gene_biotype=protein_coding;gene_name=TBL1Y;gene_sources=liftoff,augTM;ID=NA19239_ch_G0000127;Name=TBL1Y
NA19239_chrY	CAT	transcript	9004549	9200366	100	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_G0000127;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=NA19239_ch_T0000321;Name=TBL1Y
NA19239_chrY	CAT	exon	9004549	9009452	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000321:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9009267	9009452	.	-	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000321:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	9009267	9009269	.	-	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:NA19239_ch_T0000321;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9009453	9020046	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000321:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9020047	9020148	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000321:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9020047	9020148	.	-	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000321:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9020149	9022804	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000321:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9022805	9022970	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000321:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9022805	9022970	.	-	1	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000321:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9022971	9023819	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000321:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9023820	9023947	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000321:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9023820	9023947	.	-	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000321:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9023948	9024264	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000321:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9024265	9024339	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000321:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9024265	9024339	.	-	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000321:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9024340	9029379	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000321:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9029380	9029501	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000321:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9029380	9029501	.	-	2	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000321:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9029502	9035608	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000321:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9035609	9035669	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000321:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9035609	9035669	.	-	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000321:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9035670	9038398	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000321:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9038399	9038496	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000321:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9038399	9038496	.	-	2	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000321:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9038497	9038605	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000321:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9038606	9038669	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000321:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9038606	9038669	.	-	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000321:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9038670	9039367	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000321:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9039368	9039509	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000321:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9039368	9039509	.	-	1	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000321:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9039510	9039900	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000321:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9039901	9040033	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000321:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9039901	9040033	.	-	2	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000321:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9040034	9046079	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000321:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9046080	9046332	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000321:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9046080	9046332	.	-	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000321:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9046333	9067105	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000321:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9067106	9067251	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000321:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9067106	9067251	.	-	2	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000321:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9067252	9085087	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000321:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9085088	9085195	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000321:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9085088	9085145	.	-	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000321:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	9085143	9085145	.	-	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:NA19239_ch_T0000321;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9085196	9088692	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000321:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9088693	9088781	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000321:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9088782	9114329	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000321:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9114330	9114424	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000321:15;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9114425	9131987	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000321:15;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9131988	9132018	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000321:16;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9132019	9198058	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000321:16;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9198059	9198143	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000321:17;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9198144	9200127	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000321:17;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9200128	9200366	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000321;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000321:18;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	9004549	9199534	100	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_G0000127;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=NA19239_ch_T0000322;Name=TBL1Y
NA19239_chrY	CAT	exon	9004549	9009452	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000322:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9009267	9009452	.	-	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000322:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	9009267	9009269	.	-	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:NA19239_ch_T0000322;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9009453	9020046	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000322:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9020047	9020148	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000322:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9020047	9020148	.	-	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000322:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9020149	9022804	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000322:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9022805	9022970	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000322:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9022805	9022970	.	-	1	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000322:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9022971	9023819	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000322:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9023820	9023947	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000322:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9023820	9023947	.	-	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000322:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9023948	9024264	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000322:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9024265	9024339	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000322:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9024265	9024339	.	-	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000322:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9024340	9029379	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000322:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9029380	9029501	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000322:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9029380	9029501	.	-	2	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000322:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9029502	9035608	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000322:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9035609	9035669	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000322:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9035609	9035669	.	-	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000322:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9035670	9038398	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000322:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9038399	9038496	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000322:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9038399	9038496	.	-	2	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000322:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9038497	9038605	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000322:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9038606	9038669	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000322:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9038606	9038669	.	-	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000322:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9038670	9039367	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000322:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9039368	9039509	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000322:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9039368	9039509	.	-	1	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000322:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9039510	9039900	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000322:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9039901	9040033	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000322:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9039901	9040033	.	-	2	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000322:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9040034	9046079	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000322:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9046080	9046332	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000322:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9046080	9046332	.	-	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000322:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9046333	9067105	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000322:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9067106	9067251	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000322:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9067106	9067251	.	-	2	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000322:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9067252	9085087	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000322:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9085088	9085195	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000322:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9085088	9085145	.	-	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000322:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	9085143	9085145	.	-	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:NA19239_ch_T0000322;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9085196	9088692	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000322:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9088693	9088781	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000322:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9088782	9114329	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000322:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9114330	9114424	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000322:15;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9114425	9131987	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000322:15;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9131988	9132018	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000322:16;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9132019	9198058	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000322:16;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9198059	9198143	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000322:17;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9198144	9199248	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000322:17;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9199249	9199534	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000322;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000322:18;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	9004549	9199534	100	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_G0000127;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=NA19239_ch_T0000323;Name=TBL1Y
NA19239_chrY	CAT	exon	9004549	9009452	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000323:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9009267	9009452	.	-	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000323:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	9009267	9009269	.	-	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:NA19239_ch_T0000323;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9009453	9020046	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000323:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9020047	9020148	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000323:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9020047	9020148	.	-	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000323:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9020149	9022804	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000323:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9022805	9022970	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000323:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9022805	9022970	.	-	1	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000323:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9022971	9023819	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000323:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9023820	9023947	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000323:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9023820	9023947	.	-	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000323:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9023948	9024264	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000323:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9024265	9024339	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000323:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9024265	9024339	.	-	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000323:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9024340	9029379	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000323:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9029380	9029501	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000323:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9029380	9029501	.	-	2	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000323:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9029502	9035608	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000323:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9035609	9035669	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000323:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9035609	9035669	.	-	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000323:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9035670	9038398	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000323:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9038399	9038496	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000323:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9038399	9038496	.	-	2	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000323:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9038497	9038605	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000323:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9038606	9038669	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000323:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9038606	9038669	.	-	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000323:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9038670	9039367	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000323:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9039368	9039509	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000323:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9039368	9039509	.	-	1	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000323:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9039510	9039900	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000323:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9039901	9040033	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000323:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9039901	9040033	.	-	2	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000323:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9040034	9046079	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000323:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9046080	9046332	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000323:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9046080	9046332	.	-	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000323:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9046333	9067105	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000323:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9067106	9067251	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000323:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9067106	9067251	.	-	2	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000323:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9067252	9085087	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000323:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9085088	9085195	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000323:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9085088	9085145	.	-	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000323:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	9085143	9085145	.	-	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:NA19239_ch_T0000323;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9085196	9088692	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000323:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9088693	9088781	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000323:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9088782	9131987	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000323:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9131988	9132018	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000323:15;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9132019	9198058	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000323:15;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9198059	9198143	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000323:16;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9198144	9199248	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000323:16;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9199249	9199534	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000323;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000323:17;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	9004549	9199534	100	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_G0000127;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=NA19239_ch_T0000324;Name=TBL1Y
NA19239_chrY	CAT	exon	9004549	9009452	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000324:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9009267	9009452	.	-	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000324:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	9009267	9009269	.	-	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:NA19239_ch_T0000324;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9009453	9020046	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000324:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9020047	9020148	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000324:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9020047	9020148	.	-	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000324:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9020149	9022804	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000324:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9022805	9022970	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000324:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9022805	9022970	.	-	1	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000324:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9022971	9023819	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000324:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9023820	9023947	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000324:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9023820	9023947	.	-	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000324:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9023948	9024264	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000324:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9024265	9024339	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000324:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9024265	9024339	.	-	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000324:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9024340	9029379	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000324:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9029380	9029501	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000324:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9029380	9029501	.	-	2	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000324:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9029502	9035608	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000324:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9035609	9035669	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000324:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9035609	9035669	.	-	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000324:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9035670	9038398	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000324:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9038399	9038496	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000324:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9038399	9038496	.	-	2	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000324:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9038497	9038605	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000324:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9038606	9038669	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000324:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9038606	9038669	.	-	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000324:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9038670	9039367	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000324:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9039368	9039509	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000324:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9039368	9039509	.	-	1	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000324:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9039510	9039900	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000324:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9039901	9040033	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000324:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9039901	9040033	.	-	2	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000324:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9040034	9046079	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000324:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9046080	9046332	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000324:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9046080	9046332	.	-	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000324:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9046333	9067105	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000324:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9067106	9067251	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000324:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9067106	9067251	.	-	2	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000324:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9067252	9085087	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000324:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9085088	9085195	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000324:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9085088	9085145	.	-	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000324:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	9085143	9085145	.	-	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:NA19239_ch_T0000324;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9085196	9088692	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000324:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9088693	9088781	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000324:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9088782	9199248	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000324:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9199249	9199534	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000324;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000324:15;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	9004549	9199534	100	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_G0000127;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=NA19239_ch_T0000325;Name=TBL1Y
NA19239_chrY	CAT	exon	9004549	9004839	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000325:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9004831	9004839	.	-	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000325:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	9004831	9004833	.	-	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:NA19239_ch_T0000325;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9004840	9009386	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000325:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9009387	9009452	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000325:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9009387	9009452	.	-	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000325:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9009453	9020046	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000325:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9020047	9020148	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000325:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9020047	9020148	.	-	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000325:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9020149	9022804	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000325:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9022805	9022970	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000325:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9022805	9022970	.	-	1	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000325:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9022971	9023819	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000325:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9023820	9023947	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000325:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9023820	9023947	.	-	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000325:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9023948	9024264	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000325:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9024265	9024339	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000325:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9024265	9024339	.	-	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000325:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9024340	9029379	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000325:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9029380	9029501	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000325:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9029380	9029501	.	-	2	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000325:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9029502	9035608	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000325:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9035609	9035669	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000325:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9035609	9035669	.	-	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000325:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9035670	9038398	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000325:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9038399	9038496	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000325:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9038399	9038496	.	-	2	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000325:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9038497	9038605	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000325:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9038606	9038669	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000325:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9038606	9038669	.	-	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000325:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9038670	9039367	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000325:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9039368	9039509	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000325:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9039368	9039509	.	-	1	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000325:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9039510	9039900	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000325:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9039901	9040033	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000325:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9039901	9040033	.	-	2	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000325:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9040034	9046079	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000325:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9046080	9046332	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000325:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9046080	9046332	.	-	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000325:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9046333	9067105	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000325:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9067106	9067251	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000325:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9067106	9067251	.	-	2	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000325:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9067252	9085087	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000325:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9085088	9085195	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000325:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9085088	9085145	.	-	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000325:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	9085143	9085145	.	-	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:NA19239_ch_T0000325;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9085196	9088692	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000325:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9088693	9088781	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000325:15;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9088782	9131987	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000325:15;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9131988	9132018	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000325:16;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9132019	9198058	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000325:16;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9198059	9198143	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000325:17;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9198144	9199248	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000325:17;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9199249	9199534	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000325;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000325:18;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	9004549	9199534	100	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_G0000127;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=NA19239_ch_T0000326;Name=TBL1Y
NA19239_chrY	CAT	exon	9004549	9022950	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000326:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9022845	9022950	.	-	1	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000326:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	9022845	9022847	.	-	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:NA19239_ch_T0000326;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9022951	9023819	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000326:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9023820	9023947	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000326:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9023820	9023947	.	-	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000326:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9023948	9024264	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000326:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9024265	9024339	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000326:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9024265	9024339	.	-	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000326:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9024340	9029379	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000326:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9029380	9029501	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000326:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9029380	9029501	.	-	2	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000326:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9029502	9035608	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000326:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9035609	9035669	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000326:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9035609	9035669	.	-	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000326:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9035670	9038398	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000326:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9038399	9038496	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000326:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9038399	9038496	.	-	2	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000326:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9038497	9038605	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000326:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9038606	9038669	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000326:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9038606	9038669	.	-	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000326:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9038670	9039367	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000326:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9039368	9039509	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000326:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9039368	9039509	.	-	1	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000326:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9039510	9039900	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000326:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9039901	9040033	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000326:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9039901	9040033	.	-	2	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000326:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9040034	9046079	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000326:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9046080	9046332	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000326:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9046080	9046332	.	-	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000326:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9046333	9067105	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000326:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9067106	9067251	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000326:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9067106	9067251	.	-	2	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000326:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9067252	9085087	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000326:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9085088	9085195	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000326:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9085088	9085145	.	-	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000326:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	9085143	9085145	.	-	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:NA19239_ch_T0000326;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9085196	9088692	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000326:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9088693	9088781	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000326:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9088782	9131987	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000326:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9131988	9132018	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000326:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9132019	9198058	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000326:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9198059	9198143	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000326:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9198144	9199248	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000326:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9199249	9199534	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000326;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000326:15;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	9004549	9199534	100	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_G0000127;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=NA19239_ch_T0000327;Name=TBL1Y
NA19239_chrY	CAT	exon	9004549	9022950	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000327:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9022845	9022950	.	-	1	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000327:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	9022845	9022847	.	-	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:NA19239_ch_T0000327;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9022951	9023819	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000327:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9023820	9023947	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000327:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9023820	9023947	.	-	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000327:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9023948	9024264	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000327:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9024265	9024339	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000327:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9024265	9024339	.	-	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000327:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9024340	9029379	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000327:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9029380	9029501	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000327:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9029380	9029501	.	-	2	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000327:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9029502	9035608	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000327:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9035609	9035669	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000327:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9035609	9035669	.	-	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000327:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9035670	9038398	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000327:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9038399	9038496	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000327:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9038399	9038496	.	-	2	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000327:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9038497	9038605	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000327:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9038606	9038669	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000327:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9038606	9038669	.	-	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000327:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9038670	9039367	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000327:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9039368	9039509	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000327:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9039368	9039509	.	-	1	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000327:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9039510	9039900	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000327:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9039901	9040033	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000327:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9039901	9040033	.	-	2	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000327:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9040034	9046079	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000327:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9046080	9046332	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000327:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9046080	9046332	.	-	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000327:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9046333	9067105	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000327:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9067106	9067251	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000327:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9067106	9067251	.	-	2	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000327:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9067252	9085087	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000327:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9085088	9085195	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000327:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9085088	9085145	.	-	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000327:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	9085143	9085145	.	-	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:NA19239_ch_T0000327;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9085196	9088692	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000327:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9088693	9088781	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000327:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9088782	9199248	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000327:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9199249	9199534	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000327;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000327:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	9018554	9067620	100	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_G0000127;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=NA19239_ch_T0000328;Name=TBL1Y
NA19239_chrY	CAT	exon	9018554	9018765	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000328:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9018745	9018765	.	-	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000328:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	9018745	9018747	.	-	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:NA19239_ch_T0000328;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9018766	9020046	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000328:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9020047	9020148	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000328:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9020047	9020148	.	-	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000328:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9020149	9022804	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000328:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9022805	9022970	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000328:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9022805	9022970	.	-	1	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000328:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9022971	9023819	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000328:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9023820	9023947	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000328:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9023820	9023947	.	-	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000328:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9023948	9024264	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000328:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9024265	9024339	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000328:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9024265	9024339	.	-	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000328:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9024340	9029379	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000328:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9029380	9029501	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000328:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9029380	9029501	.	-	2	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000328:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9029502	9035608	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000328:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9035609	9035669	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000328:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9035609	9035669	.	-	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000328:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9035670	9038398	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000328:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9038399	9038496	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000328:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9038399	9038496	.	-	2	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000328:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9038497	9038605	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000328:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9038606	9038669	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000328:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9038606	9038669	.	-	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000328:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9038670	9039367	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000328:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9039368	9039509	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000328:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9039368	9039509	.	-	1	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000328:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9039510	9039900	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000328:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9039901	9040033	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000328:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9039901	9040033	.	-	2	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000328:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9040034	9046079	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000328:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9046080	9046332	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000328:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9046080	9046332	.	-	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000328:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9046333	9067105	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000328:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9067106	9067620	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000328:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9067106	9067351	.	-	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000328:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	9067349	9067351	.	-	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000328;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:NA19239_ch_T0000328;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	9018554	9199534	100	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_G0000127;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=NA19239_ch_T0000329;Name=TBL1Y
NA19239_chrY	CAT	exon	9018554	9018765	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000329:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9018745	9018765	.	-	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000329:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	9018745	9018747	.	-	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:NA19239_ch_T0000329;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9018766	9020046	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000329:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9020047	9020148	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000329:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9020047	9020148	.	-	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000329:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9020149	9022804	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000329:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9022805	9022970	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000329:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9022805	9022970	.	-	1	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000329:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9022971	9023819	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000329:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9023820	9023947	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000329:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9023820	9023947	.	-	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000329:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9023948	9024264	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000329:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9024265	9024339	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000329:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9024265	9024339	.	-	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000329:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9024340	9029379	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000329:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9029380	9029501	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000329:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9029380	9029501	.	-	2	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000329:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9029502	9035608	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000329:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9035609	9035669	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000329:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9035609	9035669	.	-	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000329:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9035670	9038398	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000329:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9038399	9038496	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000329:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9038399	9038496	.	-	2	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000329:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9038497	9038605	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000329:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9038606	9038669	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000329:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9038606	9038669	.	-	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000329:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9038670	9039367	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000329:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9039368	9039509	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000329:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9039368	9039509	.	-	1	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000329:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9039510	9039900	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000329:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9039901	9040033	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000329:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9039901	9040033	.	-	2	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000329:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9040034	9046079	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000329:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9046080	9046332	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000329:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9046080	9046332	.	-	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000329:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9046333	9067105	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000329:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9067106	9067251	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000329:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9067106	9067251	.	-	2	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000329:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9067252	9085087	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000329:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9085088	9085195	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000329:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9085088	9085145	.	-	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000329:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	9085143	9085145	.	-	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:NA19239_ch_T0000329;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9085196	9088692	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000329:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9088693	9088781	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000329:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9088782	9114329	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000329:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9114330	9114424	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000329:15;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9114425	9131987	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000329:15;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9131988	9132018	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000329:16;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9132019	9198058	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000329:16;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9198059	9198143	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000329:17;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9198144	9199248	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000329:17;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9199249	9199534	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000329;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000329:18;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	9018554	9199534	100	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_G0000127;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=NA19239_ch_T0000330;Name=TBL1Y
NA19239_chrY	CAT	exon	9018554	9018765	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000330:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9018745	9018765	.	-	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000330:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	9018745	9018747	.	-	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:NA19239_ch_T0000330;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9018766	9020046	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000330:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9020047	9020148	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000330:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9020047	9020148	.	-	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000330:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9020149	9022804	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000330:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9022805	9022970	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000330:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9022805	9022970	.	-	1	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000330:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9022971	9023819	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000330:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9023820	9023947	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000330:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9023820	9023947	.	-	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000330:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9023948	9024264	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000330:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9024265	9024339	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000330:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9024265	9024339	.	-	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000330:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9024340	9029379	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000330:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9029380	9029501	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000330:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9029380	9029501	.	-	2	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000330:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9029502	9035608	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000330:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9035609	9035669	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000330:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9035609	9035669	.	-	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000330:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9035670	9038398	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000330:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9038399	9038496	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000330:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9038399	9038496	.	-	2	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000330:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9038497	9038605	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000330:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9038606	9038669	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000330:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9038606	9038669	.	-	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000330:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9038670	9039367	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000330:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9039368	9039509	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000330:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9039368	9039509	.	-	1	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000330:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9039510	9039900	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000330:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9039901	9040033	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000330:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9039901	9040033	.	-	2	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000330:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9040034	9046079	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000330:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9046080	9046332	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000330:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9046080	9046332	.	-	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000330:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9046333	9067105	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000330:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9067106	9067251	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000330:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9067106	9067251	.	-	2	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000330:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9067252	9085087	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000330:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9085088	9085195	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000330:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9085088	9085145	.	-	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000330:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	9085143	9085145	.	-	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:NA19239_ch_T0000330;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9085196	9088692	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000330:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9088693	9088781	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000330:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9088782	9114329	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000330:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9114330	9114424	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000330:15;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9114425	9198058	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000330:15;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9198059	9198143	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000330:16;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9198144	9199248	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000330:16;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9199249	9199534	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000330;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000330:17;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	9018554	9199534	100	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_G0000127;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=NA19239_ch_T0000331;Name=TBL1Y
NA19239_chrY	CAT	exon	9018554	9018765	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000331:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9018745	9018765	.	-	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000331:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	9018745	9018747	.	-	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:NA19239_ch_T0000331;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9018766	9020046	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000331:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9020047	9020148	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000331:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9020047	9020148	.	-	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000331:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9020149	9022804	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000331:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9022805	9022970	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000331:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9022805	9022970	.	-	1	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000331:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9022971	9023819	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000331:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9023820	9023947	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000331:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9023820	9023947	.	-	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000331:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9023948	9024264	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000331:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9024265	9024339	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000331:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9024265	9024339	.	-	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000331:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9024340	9029379	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000331:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9029380	9029501	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000331:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9029380	9029501	.	-	2	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000331:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9029502	9035608	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000331:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9035609	9035669	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000331:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9035609	9035669	.	-	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000331:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9035670	9038398	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000331:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9038399	9038496	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000331:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9038399	9038496	.	-	2	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000331:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9038497	9038605	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000331:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9038606	9038669	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000331:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9038606	9038669	.	-	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000331:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9038670	9039367	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000331:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9039368	9039509	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000331:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9039368	9039509	.	-	1	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000331:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9039510	9039900	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000331:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9039901	9040033	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000331:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9039901	9040033	.	-	2	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000331:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9040034	9046079	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000331:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9046080	9046332	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000331:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9046080	9046332	.	-	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000331:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9046333	9067105	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000331:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9067106	9067251	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000331:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9067106	9067251	.	-	2	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000331:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9067252	9085087	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000331:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9085088	9085195	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000331:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9085088	9085145	.	-	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000331:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	9085143	9085145	.	-	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:NA19239_ch_T0000331;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9085196	9088692	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000331:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9088693	9088781	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000331:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9088782	9131987	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000331:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9131988	9132018	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000331:15;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9132019	9198058	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000331:15;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9198059	9198143	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000331:16;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9198144	9199248	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000331:16;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9199249	9199534	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000331;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000331:17;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	9018554	9199534	100	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_G0000127;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=NA19239_ch_T0000332;Name=TBL1Y
NA19239_chrY	CAT	exon	9018554	9018765	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000332:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9018745	9018765	.	-	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000332:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	9018745	9018747	.	-	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:NA19239_ch_T0000332;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9018766	9020046	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000332:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9020047	9020148	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000332:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9020047	9020148	.	-	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000332:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9020149	9022804	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000332:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9022805	9022970	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000332:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9022805	9022970	.	-	1	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000332:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9022971	9023819	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000332:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9023820	9023947	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000332:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9023820	9023947	.	-	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000332:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9023948	9024264	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000332:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9024265	9024339	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000332:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9024265	9024339	.	-	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000332:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9024340	9029379	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000332:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9029380	9029501	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000332:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9029380	9029501	.	-	2	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000332:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9029502	9035608	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000332:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9035609	9035669	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000332:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9035609	9035669	.	-	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000332:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9035670	9038398	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000332:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9038399	9038496	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000332:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9038399	9038496	.	-	2	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000332:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9038497	9038605	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000332:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9038606	9038669	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000332:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9038606	9038669	.	-	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000332:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9038670	9039367	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000332:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9039368	9039509	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000332:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9039368	9039509	.	-	1	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000332:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9039510	9039900	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000332:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9039901	9040033	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000332:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9039901	9040033	.	-	2	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000332:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9040034	9046079	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000332:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9046080	9046332	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000332:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9046080	9046332	.	-	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000332:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9046333	9067105	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000332:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9067106	9067251	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000332:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9067106	9067251	.	-	2	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000332:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9067252	9085087	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000332:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9085088	9085195	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000332:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9085088	9085145	.	-	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19239_ch_T0000332:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	9085143	9085145	.	-	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:NA19239_ch_T0000332;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9085196	9088692	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000332:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9088693	9088781	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000332:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9088782	9199248	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19239_ch_T0000332:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9199249	9199534	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000332;gene_id=NA19239_ch_G0000127;Parent=NA19239_ch_T0000332;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19239_ch_T0000332:15;Name=TBL1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	9198479	9244323	.	+	.	source_gene_common_name=AMELY;source_gene=hg002_chrY_paternal_88;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;gene_id=NA19239_ch_G0000128;gene_biotype=protein_coding;gene_name=AMELY;gene_sources=liftoff,augTM;ID=NA19239_ch_G0000128;Name=AMELY
NA19239_chrY	CAT	transcript	9198479	9244323	100	+	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000333;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_G0000128;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=NA19239_ch_T0000333;Name=AMELY
NA19239_chrY	CAT	exon	9198479	9198558	.	+	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000333;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:NA19239_ch_T0000333:0;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9198559	9236169	.	+	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000333;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:NA19239_ch_T0000333:0;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9236170	9236269	.	+	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000333;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:NA19239_ch_T0000333:1;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9236270	9237620	.	+	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000333;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:NA19239_ch_T0000333:1;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9237621	9237686	.	+	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000333;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:NA19239_ch_T0000333:2;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9237633	9237686	.	+	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000333;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:NA19239_ch_T0000333:0;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	9237633	9237635	.	+	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000333;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=start_codon:NA19239_ch_T0000333;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9237687	9240187	.	+	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000333;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:NA19239_ch_T0000333:2;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9240188	9240235	.	+	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000333;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:NA19239_ch_T0000333:3;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9240188	9240235	.	+	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000333;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:NA19239_ch_T0000333:1;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9240236	9241464	.	+	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000333;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:NA19239_ch_T0000333:3;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9241465	9241509	.	+	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000333;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:NA19239_ch_T0000333:4;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9241465	9241509	.	+	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000333;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:NA19239_ch_T0000333:2;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9241510	9241778	.	+	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000333;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:NA19239_ch_T0000333:4;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9241779	9242204	.	+	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000333;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:NA19239_ch_T0000333:5;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9241779	9242204	.	+	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000333;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:NA19239_ch_T0000333:3;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9242205	9244162	.	+	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000333;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:NA19239_ch_T0000333:5;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9244163	9244323	.	+	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000333;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:NA19239_ch_T0000333:6;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9244163	9244168	.	+	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000333;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:NA19239_ch_T0000333:4;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	9244166	9244168	.	+	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000333;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=stop_codon:NA19239_ch_T0000333;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	9236214	9244323	100	+	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000334;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_G0000128;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=NA19239_ch_T0000334;Name=AMELY
NA19239_chrY	CAT	exon	9236214	9236269	.	+	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000334;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000334;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:NA19239_ch_T0000334:0;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9236270	9237620	.	+	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000334;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000334;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:NA19239_ch_T0000334:0;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9237621	9237686	.	+	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000334;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000334;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:NA19239_ch_T0000334:1;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9237633	9237686	.	+	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000334;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000334;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:NA19239_ch_T0000334:0;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	9237633	9237635	.	+	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000334;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000334;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=start_codon:NA19239_ch_T0000334;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9237687	9240187	.	+	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000334;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000334;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:NA19239_ch_T0000334:1;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9240188	9240235	.	+	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000334;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000334;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:NA19239_ch_T0000334:2;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9240188	9240235	.	+	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000334;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000334;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:NA19239_ch_T0000334:1;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9240236	9241331	.	+	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000334;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000334;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:NA19239_ch_T0000334:2;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9241332	9241373	.	+	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000334;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000334;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:NA19239_ch_T0000334:3;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9241332	9241373	.	+	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000334;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000334;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:NA19239_ch_T0000334:2;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9241374	9241464	.	+	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000334;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000334;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:NA19239_ch_T0000334:3;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9241465	9241509	.	+	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000334;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000334;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:NA19239_ch_T0000334:4;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9241465	9241509	.	+	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000334;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000334;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:NA19239_ch_T0000334:3;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9241510	9241778	.	+	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000334;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000334;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:NA19239_ch_T0000334:4;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9241779	9242204	.	+	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000334;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000334;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:NA19239_ch_T0000334:5;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9241779	9242204	.	+	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000334;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000334;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:NA19239_ch_T0000334:4;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9242205	9244162	.	+	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000334;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000334;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:NA19239_ch_T0000334:5;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9244163	9244323	.	+	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000334;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000334;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:NA19239_ch_T0000334:6;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9244163	9244168	.	+	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000334;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000334;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:NA19239_ch_T0000334:5;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	9244166	9244168	.	+	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000334;gene_id=NA19239_ch_G0000128;Parent=NA19239_ch_T0000334;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=stop_codon:NA19239_ch_T0000334;Name=AMELY;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	9620870	9623469	.	+	.	source_gene_common_name=TTTY8B;source_gene=hg002_chrY_paternal_84;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;gene_id=NA19239_ch_G0000129;gene_biotype=lncRNA;gene_name=TTTY8B;gene_sources=liftoff;ID=NA19239_ch_G0000129;Name=TTTY8B
NA19239_chrY	CAT	transcript	9620870	9623469	1000	+	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=NA19239_ch_T0000335;gene_id=NA19239_ch_G0000129;Parent=NA19239_ch_G0000129;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=NA19239_ch_T0000335;Name=TTTY8B
NA19239_chrY	CAT	exon	9620870	9621005	.	+	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=NA19239_ch_T0000335;gene_id=NA19239_ch_G0000129;Parent=NA19239_ch_T0000335;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=exon:NA19239_ch_T0000335:0;Name=TTTY8B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9621006	9621482	.	+	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=NA19239_ch_T0000335;gene_id=NA19239_ch_G0000129;Parent=NA19239_ch_T0000335;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=intron:NA19239_ch_T0000335:0;Name=TTTY8B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9621483	9621687	.	+	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=NA19239_ch_T0000335;gene_id=NA19239_ch_G0000129;Parent=NA19239_ch_T0000335;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=exon:NA19239_ch_T0000335:1;Name=TTTY8B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9621688	9623279	.	+	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=NA19239_ch_T0000335;gene_id=NA19239_ch_G0000129;Parent=NA19239_ch_T0000335;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=intron:NA19239_ch_T0000335:1;Name=TTTY8B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9623280	9623469	.	+	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=NA19239_ch_T0000335;gene_id=NA19239_ch_G0000129;Parent=NA19239_ch_T0000335;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=exon:NA19239_ch_T0000335:2;Name=TTTY8B;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	9636594	9645032	.	-	.	source_gene_common_name=TTTY7;source_gene=hg002_chrY_paternal_83;alternative_source_transcripts=hg002_chrY_paternal_83.1;gene_id=NA19239_ch_G0000130;gene_biotype=lncRNA;gene_name=TTTY7;gene_sources=liftoff;ID=NA19239_ch_G0000130;Name=TTTY7
NA19239_chrY	CAT	transcript	9636594	9645032	1000	-	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1;transcript_id=NA19239_ch_T0000336;gene_id=NA19239_ch_G0000130;Parent=NA19239_ch_G0000130;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=NA19239_ch_T0000336;Name=TTTY7
NA19239_chrY	CAT	exon	9636594	9636839	.	-	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1;transcript_id=NA19239_ch_T0000336;gene_id=NA19239_ch_G0000130;Parent=NA19239_ch_T0000336;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:NA19239_ch_T0000336:0;Name=TTTY7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9636840	9637085	.	-	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1;transcript_id=NA19239_ch_T0000336;gene_id=NA19239_ch_G0000130;Parent=NA19239_ch_T0000336;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:NA19239_ch_T0000336:0;Name=TTTY7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9637086	9637341	.	-	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1;transcript_id=NA19239_ch_T0000336;gene_id=NA19239_ch_G0000130;Parent=NA19239_ch_T0000336;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:NA19239_ch_T0000336:1;Name=TTTY7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9637342	9638314	.	-	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1;transcript_id=NA19239_ch_T0000336;gene_id=NA19239_ch_G0000130;Parent=NA19239_ch_T0000336;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:NA19239_ch_T0000336:1;Name=TTTY7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9638315	9638428	.	-	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1;transcript_id=NA19239_ch_T0000336;gene_id=NA19239_ch_G0000130;Parent=NA19239_ch_T0000336;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:NA19239_ch_T0000336:2;Name=TTTY7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9638429	9640345	.	-	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1;transcript_id=NA19239_ch_T0000336;gene_id=NA19239_ch_G0000130;Parent=NA19239_ch_T0000336;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:NA19239_ch_T0000336:2;Name=TTTY7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9640346	9640822	.	-	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1;transcript_id=NA19239_ch_T0000336;gene_id=NA19239_ch_G0000130;Parent=NA19239_ch_T0000336;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:NA19239_ch_T0000336:3;Name=TTTY7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9640823	9641510	.	-	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1;transcript_id=NA19239_ch_T0000336;gene_id=NA19239_ch_G0000130;Parent=NA19239_ch_T0000336;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:NA19239_ch_T0000336:3;Name=TTTY7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9641511	9641585	.	-	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1;transcript_id=NA19239_ch_T0000336;gene_id=NA19239_ch_G0000130;Parent=NA19239_ch_T0000336;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:NA19239_ch_T0000336:4;Name=TTTY7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9641586	9643892	.	-	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1;transcript_id=NA19239_ch_T0000336;gene_id=NA19239_ch_G0000130;Parent=NA19239_ch_T0000336;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:NA19239_ch_T0000336:4;Name=TTTY7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9643893	9644054	.	-	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1;transcript_id=NA19239_ch_T0000336;gene_id=NA19239_ch_G0000130;Parent=NA19239_ch_T0000336;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:NA19239_ch_T0000336:5;Name=TTTY7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9644055	9644995	.	-	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1;transcript_id=NA19239_ch_T0000336;gene_id=NA19239_ch_G0000130;Parent=NA19239_ch_T0000336;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:NA19239_ch_T0000336:5;Name=TTTY7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9644996	9645032	.	-	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1;transcript_id=NA19239_ch_T0000336;gene_id=NA19239_ch_G0000130;Parent=NA19239_ch_T0000336;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:NA19239_ch_T0000336:6;Name=TTTY7;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	9647423	9651066	.	-	.	source_gene_common_name=TTTY21B;source_gene=hg002_chrY_paternal_82;alternative_source_transcripts=hg002_chrY_paternal_82.1;gene_id=NA19239_ch_G0000131;gene_biotype=lncRNA;gene_name=TTTY21B;gene_sources=liftoff;ID=NA19239_ch_G0000131;Name=TTTY21B
NA19239_chrY	CAT	transcript	9647423	9651066	1000	-	.	source_transcript=hg002_chrY_paternal_82.1;source_transcript_name=hg002_chrY_paternal_82.1;source_gene=hg002_chrY_paternal_82;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_82;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_82.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_82.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21B;alternative_source_transcripts=hg002_chrY_paternal_82.1;transcript_id=NA19239_ch_T0000337;gene_id=NA19239_ch_G0000131;Parent=NA19239_ch_G0000131;transcript_name=hg002_chrY_paternal_82.1;gene_name=TTTY21B;ID=NA19239_ch_T0000337;Name=TTTY21B
NA19239_chrY	CAT	exon	9647423	9647527	.	-	.	source_transcript=hg002_chrY_paternal_82.1;source_transcript_name=hg002_chrY_paternal_82.1;source_gene=hg002_chrY_paternal_82;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_82;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_82.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_82.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21B;alternative_source_transcripts=hg002_chrY_paternal_82.1;transcript_id=NA19239_ch_T0000337;gene_id=NA19239_ch_G0000131;Parent=NA19239_ch_T0000337;transcript_name=hg002_chrY_paternal_82.1;gene_name=TTTY21B;ID=exon:NA19239_ch_T0000337:0;Name=TTTY21B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9647528	9650864	.	-	.	source_transcript=hg002_chrY_paternal_82.1;source_transcript_name=hg002_chrY_paternal_82.1;source_gene=hg002_chrY_paternal_82;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_82;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_82.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_82.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21B;alternative_source_transcripts=hg002_chrY_paternal_82.1;transcript_id=NA19239_ch_T0000337;gene_id=NA19239_ch_G0000131;Parent=NA19239_ch_T0000337;transcript_name=hg002_chrY_paternal_82.1;gene_name=TTTY21B;ID=intron:NA19239_ch_T0000337:0;Name=TTTY21B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9650865	9651066	.	-	.	source_transcript=hg002_chrY_paternal_82.1;source_transcript_name=hg002_chrY_paternal_82.1;source_gene=hg002_chrY_paternal_82;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_82;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_82.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_82.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21B;alternative_source_transcripts=hg002_chrY_paternal_82.1;transcript_id=NA19239_ch_T0000337;gene_id=NA19239_ch_G0000131;Parent=NA19239_ch_T0000337;transcript_name=hg002_chrY_paternal_82.1;gene_name=TTTY21B;ID=exon:NA19239_ch_T0000337:1;Name=TTTY21B;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	9666056	9688257	.	+	.	source_gene_common_name=TTTY2B;source_gene=hg002_chrY_paternal_81;alternative_source_transcripts=hg002_chrY_paternal_81.1;gene_id=NA19239_ch_G0000132;gene_biotype=lncRNA;gene_name=TTTY2B;gene_sources=liftoff;ID=NA19239_ch_G0000132;Name=TTTY2B
NA19239_chrY	CAT	transcript	9666056	9688257	1000	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1;transcript_id=NA19239_ch_T0000338;gene_id=NA19239_ch_G0000132;Parent=NA19239_ch_G0000132;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=NA19239_ch_T0000338;Name=TTTY2B
NA19239_chrY	CAT	exon	9666056	9666260	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1;transcript_id=NA19239_ch_T0000338;gene_id=NA19239_ch_G0000132;Parent=NA19239_ch_T0000338;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:NA19239_ch_T0000338:0;Name=TTTY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9666261	9672094	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1;transcript_id=NA19239_ch_T0000338;gene_id=NA19239_ch_G0000132;Parent=NA19239_ch_T0000338;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:NA19239_ch_T0000338:0;Name=TTTY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9672095	9672172	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1;transcript_id=NA19239_ch_T0000338;gene_id=NA19239_ch_G0000132;Parent=NA19239_ch_T0000338;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:NA19239_ch_T0000338:1;Name=TTTY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9672173	9674648	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1;transcript_id=NA19239_ch_T0000338;gene_id=NA19239_ch_G0000132;Parent=NA19239_ch_T0000338;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:NA19239_ch_T0000338:1;Name=TTTY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9674649	9674735	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1;transcript_id=NA19239_ch_T0000338;gene_id=NA19239_ch_G0000132;Parent=NA19239_ch_T0000338;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:NA19239_ch_T0000338:2;Name=TTTY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9674736	9682129	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1;transcript_id=NA19239_ch_T0000338;gene_id=NA19239_ch_G0000132;Parent=NA19239_ch_T0000338;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:NA19239_ch_T0000338:2;Name=TTTY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9682130	9682278	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1;transcript_id=NA19239_ch_T0000338;gene_id=NA19239_ch_G0000132;Parent=NA19239_ch_T0000338;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:NA19239_ch_T0000338:3;Name=TTTY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9682279	9682970	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1;transcript_id=NA19239_ch_T0000338;gene_id=NA19239_ch_G0000132;Parent=NA19239_ch_T0000338;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:NA19239_ch_T0000338:3;Name=TTTY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9682971	9683127	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1;transcript_id=NA19239_ch_T0000338;gene_id=NA19239_ch_G0000132;Parent=NA19239_ch_T0000338;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:NA19239_ch_T0000338:4;Name=TTTY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9683128	9685957	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1;transcript_id=NA19239_ch_T0000338;gene_id=NA19239_ch_G0000132;Parent=NA19239_ch_T0000338;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:NA19239_ch_T0000338:4;Name=TTTY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9685958	9686036	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1;transcript_id=NA19239_ch_T0000338;gene_id=NA19239_ch_G0000132;Parent=NA19239_ch_T0000338;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:NA19239_ch_T0000338:5;Name=TTTY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9686037	9686156	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1;transcript_id=NA19239_ch_T0000338;gene_id=NA19239_ch_G0000132;Parent=NA19239_ch_T0000338;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:NA19239_ch_T0000338:5;Name=TTTY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9686157	9686354	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1;transcript_id=NA19239_ch_T0000338;gene_id=NA19239_ch_G0000132;Parent=NA19239_ch_T0000338;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:NA19239_ch_T0000338:6;Name=TTTY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9686355	9687577	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1;transcript_id=NA19239_ch_T0000338;gene_id=NA19239_ch_G0000132;Parent=NA19239_ch_T0000338;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:NA19239_ch_T0000338:6;Name=TTTY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9687578	9688257	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1;transcript_id=NA19239_ch_T0000338;gene_id=NA19239_ch_G0000132;Parent=NA19239_ch_T0000338;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:NA19239_ch_T0000338:7;Name=TTTY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	9682937	9704100	.	-	.	source_gene_common_name=TTTY1B;source_gene=hg002_chrY_paternal_249;alternative_source_transcripts=hg002_chrY_paternal_80.1;gene_id=NA19239_ch_G0000133;gene_biotype=lncRNA;gene_name=TTTY1B;gene_sources=liftoff;ID=NA19239_ch_G0000133;Name=TTTY1B
NA19239_chrY	CAT	transcript	9682937	9704100	1000	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_80.1;transcript_id=NA19239_ch_T0000339;gene_id=NA19239_ch_G0000133;Parent=NA19239_ch_G0000133;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=NA19239_ch_T0000339;Name=TTTY1B
NA19239_chrY	CAT	exon	9682937	9683194	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_80.1;transcript_id=NA19239_ch_T0000339;gene_id=NA19239_ch_G0000133;Parent=NA19239_ch_T0000339;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:NA19239_ch_T0000339:0;Name=TTTY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9683195	9690775	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_80.1;transcript_id=NA19239_ch_T0000339;gene_id=NA19239_ch_G0000133;Parent=NA19239_ch_T0000339;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=intron:NA19239_ch_T0000339:0;Name=TTTY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9690776	9690913	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_80.1;transcript_id=NA19239_ch_T0000339;gene_id=NA19239_ch_G0000133;Parent=NA19239_ch_T0000339;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:NA19239_ch_T0000339:1;Name=TTTY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9690914	9693269	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_80.1;transcript_id=NA19239_ch_T0000339;gene_id=NA19239_ch_G0000133;Parent=NA19239_ch_T0000339;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=intron:NA19239_ch_T0000339:1;Name=TTTY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9693270	9693378	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_80.1;transcript_id=NA19239_ch_T0000339;gene_id=NA19239_ch_G0000133;Parent=NA19239_ch_T0000339;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:NA19239_ch_T0000339:2;Name=TTTY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9693379	9700241	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_80.1;transcript_id=NA19239_ch_T0000339;gene_id=NA19239_ch_G0000133;Parent=NA19239_ch_T0000339;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=intron:NA19239_ch_T0000339:2;Name=TTTY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9700242	9700401	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_80.1;transcript_id=NA19239_ch_T0000339;gene_id=NA19239_ch_G0000133;Parent=NA19239_ch_T0000339;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:NA19239_ch_T0000339:3;Name=TTTY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9700402	9703825	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_80.1;transcript_id=NA19239_ch_T0000339;gene_id=NA19239_ch_G0000133;Parent=NA19239_ch_T0000339;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=intron:NA19239_ch_T0000339:3;Name=TTTY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9703826	9704100	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_80.1;transcript_id=NA19239_ch_T0000339;gene_id=NA19239_ch_G0000133;Parent=NA19239_ch_T0000339;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:NA19239_ch_T0000339:4;Name=TTTY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	9724581	9727992	.	+	.	source_gene_common_name=LOC107987353;source_gene=hg002_chrY_paternal_250;gene_id=NA19239_ch_G0000134;gene_biotype=lncRNA;gene_name=LOC107987353;gene_sources=liftoff;ID=NA19239_ch_G0000134;Name=LOC107987353
NA19239_chrY	CAT	transcript	9724581	9727992	1000	+	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;transcript_id=NA19239_ch_T0000340;gene_id=NA19239_ch_G0000134;Parent=NA19239_ch_G0000134;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=NA19239_ch_T0000340;Name=LOC107987353
NA19239_chrY	CAT	exon	9724581	9724749	.	+	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;transcript_id=NA19239_ch_T0000340;gene_id=NA19239_ch_G0000134;Parent=NA19239_ch_T0000340;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=exon:NA19239_ch_T0000340:0;Name=LOC107987353;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9724750	9725125	.	+	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;transcript_id=NA19239_ch_T0000340;gene_id=NA19239_ch_G0000134;Parent=NA19239_ch_T0000340;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=intron:NA19239_ch_T0000340:0;Name=LOC107987353;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9725126	9725198	.	+	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;transcript_id=NA19239_ch_T0000340;gene_id=NA19239_ch_G0000134;Parent=NA19239_ch_T0000340;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=exon:NA19239_ch_T0000340:1;Name=LOC107987353;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9725199	9727729	.	+	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;transcript_id=NA19239_ch_T0000340;gene_id=NA19239_ch_G0000134;Parent=NA19239_ch_T0000340;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=intron:NA19239_ch_T0000340:1;Name=LOC107987353;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9727730	9727992	.	+	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;transcript_id=NA19239_ch_T0000340;gene_id=NA19239_ch_G0000134;Parent=NA19239_ch_T0000340;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=exon:NA19239_ch_T0000340:2;Name=LOC107987353;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	9730932	9733018	.	+	.	source_gene_common_name=TTTY22;source_gene=hg002_chrY_paternal_78;gene_id=NA19239_ch_G0000135;gene_biotype=lncRNA;gene_name=TTTY22;gene_sources=transMap;ID=NA19239_ch_G0000135;Name=TTTY22
NA19239_chrY	CAT	transcript	9730932	9733018	1000	+	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=194.14600000000002;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=NA19239_ch_T0000341;gene_id=NA19239_ch_G0000135;Parent=NA19239_ch_G0000135;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=NA19239_ch_T0000341;Name=TTTY22
NA19239_chrY	CAT	exon	9730932	9731086	.	+	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=194.14600000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=NA19239_ch_T0000341;gene_id=NA19239_ch_G0000135;Parent=NA19239_ch_T0000341;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=exon:NA19239_ch_T0000341:0;Name=TTTY22;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9731087	9732972	.	+	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=194.14600000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=NA19239_ch_T0000341;gene_id=NA19239_ch_G0000135;Parent=NA19239_ch_T0000341;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=intron:NA19239_ch_T0000341:0;Name=TTTY22;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9732973	9733018	.	+	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=194.14600000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=NA19239_ch_T0000341;gene_id=NA19239_ch_G0000135;Parent=NA19239_ch_T0000341;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=exon:NA19239_ch_T0000341:1;Name=TTTY22;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	9733088	9737282	.	+	.	source_gene_common_name=LINC00280;source_gene=hg002_chrY_paternal_251;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_251.1;gene_id=NA19239_ch_G0000136;gene_biotype=lncRNA;gene_name=LINC00280;gene_sources=liftoff;ID=NA19239_ch_G0000136;Name=LINC00280
NA19239_chrY	CAT	transcript	9733088	9737282	1000	+	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_251.1;transcript_id=NA19239_ch_T0000342;gene_id=NA19239_ch_G0000136;Parent=NA19239_ch_G0000136;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=NA19239_ch_T0000342;Name=LINC00280
NA19239_chrY	CAT	exon	9733088	9733173	.	+	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_251.1;transcript_id=NA19239_ch_T0000342;gene_id=NA19239_ch_G0000136;Parent=NA19239_ch_T0000342;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=exon:NA19239_ch_T0000342:0;Name=LINC00280;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9733174	9735674	.	+	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_251.1;transcript_id=NA19239_ch_T0000342;gene_id=NA19239_ch_G0000136;Parent=NA19239_ch_T0000342;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=intron:NA19239_ch_T0000342:0;Name=LINC00280;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9735675	9735817	.	+	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_251.1;transcript_id=NA19239_ch_T0000342;gene_id=NA19239_ch_G0000136;Parent=NA19239_ch_T0000342;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=exon:NA19239_ch_T0000342:1;Name=LINC00280;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9735818	9737063	.	+	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_251.1;transcript_id=NA19239_ch_T0000342;gene_id=NA19239_ch_G0000136;Parent=NA19239_ch_T0000342;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=intron:NA19239_ch_T0000342:1;Name=LINC00280;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9737064	9737282	.	+	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_251.1;transcript_id=NA19239_ch_T0000342;gene_id=NA19239_ch_G0000136;Parent=NA19239_ch_T0000342;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=exon:NA19239_ch_T0000342:2;Name=LINC00280;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	9830598	9836201	.	+	.	source_gene_common_name=FAM197Y9;source_gene=hg002_chrY_paternal_255;alternative_source_transcripts=hg002_chrY_paternal_255.1;gene_id=NA19239_ch_G0000137;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=NA19239_ch_G0000137;Name=FAM197Y9
NA19239_chrY	CAT	transcript	9830598	9836201	1000	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1;transcript_id=NA19239_ch_T0000343;gene_id=NA19239_ch_G0000137;Parent=NA19239_ch_G0000137;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=NA19239_ch_T0000343;Name=FAM197Y9
NA19239_chrY	CAT	exon	9830598	9830699	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1;transcript_id=NA19239_ch_T0000343;gene_id=NA19239_ch_G0000137;Parent=NA19239_ch_T0000343;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=exon:NA19239_ch_T0000343:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9830700	9830785	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1;transcript_id=NA19239_ch_T0000343;gene_id=NA19239_ch_G0000137;Parent=NA19239_ch_T0000343;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=intron:NA19239_ch_T0000343:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9830786	9830931	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1;transcript_id=NA19239_ch_T0000343;gene_id=NA19239_ch_G0000137;Parent=NA19239_ch_T0000343;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=exon:NA19239_ch_T0000343:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9830932	9832431	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1;transcript_id=NA19239_ch_T0000343;gene_id=NA19239_ch_G0000137;Parent=NA19239_ch_T0000343;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=intron:NA19239_ch_T0000343:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9832432	9832590	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1;transcript_id=NA19239_ch_T0000343;gene_id=NA19239_ch_G0000137;Parent=NA19239_ch_T0000343;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=exon:NA19239_ch_T0000343:2;Name=FAM197Y9;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9832591	9836141	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1;transcript_id=NA19239_ch_T0000343;gene_id=NA19239_ch_G0000137;Parent=NA19239_ch_T0000343;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=intron:NA19239_ch_T0000343:2;Name=FAM197Y9;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9836142	9836201	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1;transcript_id=NA19239_ch_T0000343;gene_id=NA19239_ch_G0000137;Parent=NA19239_ch_T0000343;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=exon:NA19239_ch_T0000343:3;Name=FAM197Y9;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	9845518	9848313	.	-	.	source_gene_common_name=TSPY2;source_gene=hg002_chrY_paternal_256;gene_id=NA19239_ch_G0000138;gene_biotype=protein_coding;gene_name=TSPY2;gene_sources=liftoff;ID=NA19239_ch_G0000138;Name=TSPY2
NA19239_chrY	CAT	transcript	9845518	9848313	9990	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=299.887;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000344;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_G0000138;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=NA19239_ch_T0000344;Name=TSPY2
NA19239_chrY	CAT	exon	9845518	9845733	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000344;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000344;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:NA19239_ch_T0000344:0;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9845734	9846427	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000344;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000344;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:NA19239_ch_T0000344:0;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9846428	9846520	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000344;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000344;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:NA19239_ch_T0000344:1;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9846458	9846520	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000344;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000344;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:NA19239_ch_T0000344:0;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	9846458	9846460	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000344;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000344;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=stop_codon:NA19239_ch_T0000344;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9846521	9846615	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000344;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000344;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:NA19239_ch_T0000344:1;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9846616	9846761	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000344;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000344;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:NA19239_ch_T0000344:2;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9846616	9846761	.	-	2	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000344;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000344;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:NA19239_ch_T0000344:1;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9846762	9846862	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000344;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000344;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:NA19239_ch_T0000344:2;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9846863	9846974	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000344;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000344;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:NA19239_ch_T0000344:3;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9846863	9846974	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000344;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000344;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:NA19239_ch_T0000344:2;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9846975	9847102	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000344;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000344;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:NA19239_ch_T0000344:3;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9847103	9847180	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000344;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000344;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:NA19239_ch_T0000344:4;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9847103	9847180	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000344;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000344;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:NA19239_ch_T0000344:3;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9847181	9847781	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000344;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000344;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:NA19239_ch_T0000344:4;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9847782	9848313	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000344;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000344;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:NA19239_ch_T0000344:5;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9847782	9848267	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000344;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000344;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:NA19239_ch_T0000344:4;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	9848265	9848267	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000344;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000344;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=start_codon:NA19239_ch_T0000344;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	9845518	9848313	9990	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=299.892;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000345;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_G0000138;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=NA19239_ch_T0000345;Name=TSPY2
NA19239_chrY	CAT	exon	9845518	9845733	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000345;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000345;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:NA19239_ch_T0000345:0;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9845711	9845733	.	-	2	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000345;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000345;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:NA19239_ch_T0000345:0;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	9845711	9845713	.	-	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000345;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000345;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=stop_codon:NA19239_ch_T0000345;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9845734	9846427	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000345;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000345;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:NA19239_ch_T0000345:0;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9846428	9846509	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000345;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000345;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:NA19239_ch_T0000345:1;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9846428	9846509	.	-	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000345;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000345;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:NA19239_ch_T0000345:1;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9846510	9846615	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000345;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000345;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:NA19239_ch_T0000345:1;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9846616	9846761	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000345;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000345;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:NA19239_ch_T0000345:2;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9846616	9846761	.	-	2	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000345;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000345;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:NA19239_ch_T0000345:2;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9846762	9846862	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000345;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000345;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:NA19239_ch_T0000345:2;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9846863	9846974	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000345;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000345;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:NA19239_ch_T0000345:3;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9846863	9846974	.	-	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000345;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000345;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:NA19239_ch_T0000345:3;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9846975	9847102	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000345;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000345;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:NA19239_ch_T0000345:3;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9847103	9847180	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000345;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000345;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:NA19239_ch_T0000345:4;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9847103	9847180	.	-	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000345;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000345;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:NA19239_ch_T0000345:4;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9847181	9847781	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000345;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000345;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:NA19239_ch_T0000345:4;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9847782	9848313	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000345;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000345;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:NA19239_ch_T0000345:5;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9847782	9848267	.	-	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000345;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000345;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:NA19239_ch_T0000345:5;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	9848265	9848267	.	-	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000345;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000345;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=start_codon:NA19239_ch_T0000345;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	9845518	9848313	9990	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=299.885;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000346;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_G0000138;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=NA19239_ch_T0000346;Name=TSPY2
NA19239_chrY	CAT	exon	9845518	9845733	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000346;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000346;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:NA19239_ch_T0000346:0;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9845734	9846427	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000346;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000346;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:NA19239_ch_T0000346:0;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9846428	9846509	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000346;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000346;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:NA19239_ch_T0000346:1;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9846458	9846509	.	-	1	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000346;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000346;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:NA19239_ch_T0000346:0;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	9846458	9846460	.	-	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000346;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000346;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=stop_codon:NA19239_ch_T0000346;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9846510	9846615	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000346;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000346;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:NA19239_ch_T0000346:1;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9846616	9846754	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000346;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000346;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:NA19239_ch_T0000346:2;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9846616	9846754	.	-	2	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000346;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000346;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:NA19239_ch_T0000346:1;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9846755	9846862	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000346;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000346;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:NA19239_ch_T0000346:2;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9846863	9846974	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000346;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000346;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:NA19239_ch_T0000346:3;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9846863	9846974	.	-	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000346;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000346;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:NA19239_ch_T0000346:2;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9846975	9847102	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000346;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000346;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:NA19239_ch_T0000346:3;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9847103	9847180	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000346;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000346;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:NA19239_ch_T0000346:4;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9847103	9847180	.	-	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000346;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000346;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:NA19239_ch_T0000346:3;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9847181	9847781	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000346;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000346;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:NA19239_ch_T0000346:4;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9847782	9848313	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000346;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000346;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:NA19239_ch_T0000346:5;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	9847782	9848267	.	-	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000346;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000346;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:NA19239_ch_T0000346:4;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	9848265	9848267	.	-	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000346;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000346;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=start_codon:NA19239_ch_T0000346;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	9845518	9848313	1000	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000347;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_G0000138;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=NA19239_ch_T0000347;Name=TSPY2
NA19239_chrY	CAT	exon	9845518	9845733	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000347;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000347;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:NA19239_ch_T0000347:0;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9845734	9846427	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000347;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000347;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:NA19239_ch_T0000347:0;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9846428	9846520	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000347;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000347;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:NA19239_ch_T0000347:1;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9846521	9846615	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000347;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000347;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:NA19239_ch_T0000347:1;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9846616	9846754	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000347;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000347;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:NA19239_ch_T0000347:2;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9846755	9846862	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000347;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000347;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:NA19239_ch_T0000347:2;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9846863	9846974	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000347;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000347;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:NA19239_ch_T0000347:3;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9846975	9847102	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000347;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000347;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:NA19239_ch_T0000347:3;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9847103	9847180	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000347;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000347;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:NA19239_ch_T0000347:4;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9847181	9847781	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000347;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000347;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:NA19239_ch_T0000347:4;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9847782	9848313	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=NA19239_ch_T0000347;gene_id=NA19239_ch_G0000138;Parent=NA19239_ch_T0000347;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:NA19239_ch_T0000347:5;Name=TSPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	9850926	9852090	.	+	.	source_gene_common_name=TTTY23B;source_gene=hg002_chrY_paternal_257;alternative_source_transcripts=hg002_chrY_paternal_73.1;gene_id=NA19239_ch_G0000139;gene_biotype=lncRNA;gene_name=TTTY23B;gene_sources=liftoff;ID=NA19239_ch_G0000139;Name=TTTY23B
NA19239_chrY	CAT	transcript	9850926	9852090	1000	+	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_73.1;transcript_id=NA19239_ch_T0000348;gene_id=NA19239_ch_G0000139;Parent=NA19239_ch_G0000139;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=NA19239_ch_T0000348;Name=TTTY23B
NA19239_chrY	CAT	exon	9850926	9850982	.	+	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_73.1;transcript_id=NA19239_ch_T0000348;gene_id=NA19239_ch_G0000139;Parent=NA19239_ch_T0000348;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=exon:NA19239_ch_T0000348:0;Name=TTTY23B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9850983	9851095	.	+	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_73.1;transcript_id=NA19239_ch_T0000348;gene_id=NA19239_ch_G0000139;Parent=NA19239_ch_T0000348;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=intron:NA19239_ch_T0000348:0;Name=TTTY23B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9851096	9851241	.	+	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_73.1;transcript_id=NA19239_ch_T0000348;gene_id=NA19239_ch_G0000139;Parent=NA19239_ch_T0000348;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=exon:NA19239_ch_T0000348:1;Name=TTTY23B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	9851242	9851781	.	+	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_73.1;transcript_id=NA19239_ch_T0000348;gene_id=NA19239_ch_G0000139;Parent=NA19239_ch_T0000348;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=intron:NA19239_ch_T0000348:1;Name=TTTY23B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	9851782	9852090	.	+	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_73.1;transcript_id=NA19239_ch_T0000348;gene_id=NA19239_ch_G0000139;Parent=NA19239_ch_T0000348;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=exon:NA19239_ch_T0000348:2;Name=TTTY23B;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	11477528	11480542	.	-	.	source_gene_common_name=LOC124904996;source_gene=hg002_chrY_paternal_275;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;gene_id=NA19239_ch_G0000140;gene_biotype=lncRNA;gene_name=LOC124904996;gene_sources=liftoff;ID=NA19239_ch_G0000140;Name=LOC124904996
NA19239_chrY	CAT	transcript	11477528	11480542	1000	-	.	source_transcript=hg002_chrY_paternal_275.1;source_transcript_name=hg002_chrY_paternal_275.1;source_gene=hg002_chrY_paternal_275;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_275;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_275.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_275.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124904996;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;transcript_id=NA19239_ch_T0000349;gene_id=NA19239_ch_G0000140;Parent=NA19239_ch_G0000140;transcript_name=hg002_chrY_paternal_275.1;gene_name=LOC124904996;ID=NA19239_ch_T0000349;Name=LOC124904996
NA19239_chrY	CAT	exon	11477528	11478793	.	-	.	source_transcript=hg002_chrY_paternal_275.1;source_transcript_name=hg002_chrY_paternal_275.1;source_gene=hg002_chrY_paternal_275;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_275;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_275.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124904996;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;transcript_id=NA19239_ch_T0000349;gene_id=NA19239_ch_G0000140;Parent=NA19239_ch_T0000349;transcript_name=hg002_chrY_paternal_275.1;gene_name=LOC124904996;ID=exon:NA19239_ch_T0000349:0;Name=LOC124904996;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	11478794	11480120	.	-	.	source_transcript=hg002_chrY_paternal_275.1;source_transcript_name=hg002_chrY_paternal_275.1;source_gene=hg002_chrY_paternal_275;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_275;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_275.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124904996;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;transcript_id=NA19239_ch_T0000349;gene_id=NA19239_ch_G0000140;Parent=NA19239_ch_T0000349;transcript_name=hg002_chrY_paternal_275.1;gene_name=LOC124904996;ID=intron:NA19239_ch_T0000349:0;Name=LOC124904996;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	11480121	11480542	.	-	.	source_transcript=hg002_chrY_paternal_275.1;source_transcript_name=hg002_chrY_paternal_275.1;source_gene=hg002_chrY_paternal_275;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_275;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_275.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124904996;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;transcript_id=NA19239_ch_T0000349;gene_id=NA19239_ch_G0000140;Parent=NA19239_ch_T0000349;transcript_name=hg002_chrY_paternal_275.1;gene_name=LOC124904996;ID=exon:NA19239_ch_T0000349:1;Name=LOC124904996;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	11563052	11571409	.	-	.	source_gene_common_name=LOC105379273;source_gene=hg002_chrY_paternal_284;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;gene_id=NA19239_ch_G0000141;gene_biotype=lncRNA;gene_name=LOC105379273;gene_sources=liftoff;ID=NA19239_ch_G0000141;Name=LOC105379273
NA19239_chrY	CAT	transcript	11563052	11571409	1000	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=NA19239_ch_T0000350;gene_id=NA19239_ch_G0000141;Parent=NA19239_ch_G0000141;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=NA19239_ch_T0000350;Name=LOC105379273
NA19239_chrY	CAT	exon	11563052	11563093	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=NA19239_ch_T0000350;gene_id=NA19239_ch_G0000141;Parent=NA19239_ch_T0000350;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=exon:NA19239_ch_T0000350:0;Name=LOC105379273;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	11563094	11569155	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=NA19239_ch_T0000350;gene_id=NA19239_ch_G0000141;Parent=NA19239_ch_T0000350;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=intron:NA19239_ch_T0000350:0;Name=LOC105379273;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	11569156	11569214	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=NA19239_ch_T0000350;gene_id=NA19239_ch_G0000141;Parent=NA19239_ch_T0000350;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=exon:NA19239_ch_T0000350:1;Name=LOC105379273;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	11569215	11571349	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=NA19239_ch_T0000350;gene_id=NA19239_ch_G0000141;Parent=NA19239_ch_T0000350;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=intron:NA19239_ch_T0000350:1;Name=LOC105379273;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	11571350	11571409	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=NA19239_ch_T0000350;gene_id=NA19239_ch_G0000141;Parent=NA19239_ch_T0000350;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=exon:NA19239_ch_T0000350:2;Name=LOC105379273;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	13680221	13687835	.	+	.	source_gene_common_name=LOC112268312;source_gene=hg002_chrY_paternal_318;gene_id=NA19239_ch_G0000142;gene_biotype=lncRNA;gene_name=LOC112268312;gene_sources=liftoff;ID=NA19239_ch_G0000142;Name=LOC112268312
NA19239_chrY	CAT	transcript	13680221	13687835	1000	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=NA19239_ch_T0000351;gene_id=NA19239_ch_G0000142;Parent=NA19239_ch_G0000142;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=NA19239_ch_T0000351;Name=LOC112268312
NA19239_chrY	CAT	exon	13680221	13680310	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=NA19239_ch_T0000351;gene_id=NA19239_ch_G0000142;Parent=NA19239_ch_T0000351;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:NA19239_ch_T0000351:0;Name=LOC112268312;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	13680311	13680496	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=NA19239_ch_T0000351;gene_id=NA19239_ch_G0000142;Parent=NA19239_ch_T0000351;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:NA19239_ch_T0000351:0;Name=LOC112268312;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	13680497	13680658	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=NA19239_ch_T0000351;gene_id=NA19239_ch_G0000142;Parent=NA19239_ch_T0000351;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:NA19239_ch_T0000351:1;Name=LOC112268312;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	13680659	13686636	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=NA19239_ch_T0000351;gene_id=NA19239_ch_G0000142;Parent=NA19239_ch_T0000351;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:NA19239_ch_T0000351:1;Name=LOC112268312;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	13686637	13687835	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=NA19239_ch_T0000351;gene_id=NA19239_ch_G0000142;Parent=NA19239_ch_T0000351;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:NA19239_ch_T0000351:2;Name=LOC112268312;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	13680221	13686772	1000	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=NA19239_ch_T0000352;gene_id=NA19239_ch_G0000142;Parent=NA19239_ch_G0000142;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=NA19239_ch_T0000352;Name=LOC112268312
NA19239_chrY	CAT	exon	13680221	13680310	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=NA19239_ch_T0000352;gene_id=NA19239_ch_G0000142;Parent=NA19239_ch_T0000352;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:NA19239_ch_T0000352:0;Name=LOC112268312;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	13680311	13680496	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=NA19239_ch_T0000352;gene_id=NA19239_ch_G0000142;Parent=NA19239_ch_T0000352;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:NA19239_ch_T0000352:0;Name=LOC112268312;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	13680497	13680658	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=NA19239_ch_T0000352;gene_id=NA19239_ch_G0000142;Parent=NA19239_ch_T0000352;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:NA19239_ch_T0000352:1;Name=LOC112268312;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	13680659	13686636	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=NA19239_ch_T0000352;gene_id=NA19239_ch_G0000142;Parent=NA19239_ch_T0000352;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:NA19239_ch_T0000352:1;Name=LOC112268312;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	13686637	13686772	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=NA19239_ch_T0000352;gene_id=NA19239_ch_G0000142;Parent=NA19239_ch_T0000352;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:NA19239_ch_T0000352:2;Name=LOC112268312;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	13680344	13687835	1000	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=NA19239_ch_T0000353;gene_id=NA19239_ch_G0000142;Parent=NA19239_ch_G0000142;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=NA19239_ch_T0000353;Name=LOC112268312
NA19239_chrY	CAT	exon	13680344	13680362	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=NA19239_ch_T0000353;gene_id=NA19239_ch_G0000142;Parent=NA19239_ch_T0000353;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:NA19239_ch_T0000353:0;Name=LOC112268312;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	13680363	13680496	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=NA19239_ch_T0000353;gene_id=NA19239_ch_G0000142;Parent=NA19239_ch_T0000353;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:NA19239_ch_T0000353:0;Name=LOC112268312;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	13680497	13680658	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=NA19239_ch_T0000353;gene_id=NA19239_ch_G0000142;Parent=NA19239_ch_T0000353;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:NA19239_ch_T0000353:1;Name=LOC112268312;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	13680659	13686636	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=NA19239_ch_T0000353;gene_id=NA19239_ch_G0000142;Parent=NA19239_ch_T0000353;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:NA19239_ch_T0000353:1;Name=LOC112268312;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	13686637	13687835	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=NA19239_ch_T0000353;gene_id=NA19239_ch_G0000142;Parent=NA19239_ch_T0000353;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:NA19239_ch_T0000353:2;Name=LOC112268312;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	13723032	13731966	.	-	.	source_gene_common_name=LOC107987343;source_gene=hg002_chrY_paternal_305;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;gene_id=NA19239_ch_G0000143;gene_biotype=lncRNA;gene_name=LOC107987343;gene_sources=liftoff;ID=NA19239_ch_G0000143;Name=LOC107987343
NA19239_chrY	CAT	transcript	13723032	13731966	1000	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=NA19239_ch_T0000354;gene_id=NA19239_ch_G0000143;Parent=NA19239_ch_G0000143;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=NA19239_ch_T0000354;Name=LOC107987343
NA19239_chrY	CAT	exon	13723032	13724424	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=NA19239_ch_T0000354;gene_id=NA19239_ch_G0000143;Parent=NA19239_ch_T0000354;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=exon:NA19239_ch_T0000354:0;Name=LOC107987343;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	13724425	13726986	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=NA19239_ch_T0000354;gene_id=NA19239_ch_G0000143;Parent=NA19239_ch_T0000354;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=intron:NA19239_ch_T0000354:0;Name=LOC107987343;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	13726987	13727113	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=NA19239_ch_T0000354;gene_id=NA19239_ch_G0000143;Parent=NA19239_ch_T0000354;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=exon:NA19239_ch_T0000354:1;Name=LOC107987343;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	13727114	13730070	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=NA19239_ch_T0000354;gene_id=NA19239_ch_G0000143;Parent=NA19239_ch_T0000354;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=intron:NA19239_ch_T0000354:1;Name=LOC107987343;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	13730071	13731966	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=NA19239_ch_T0000354;gene_id=NA19239_ch_G0000143;Parent=NA19239_ch_T0000354;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=exon:NA19239_ch_T0000354:2;Name=LOC107987343;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	13774562	13790035	.	-	.	source_gene_common_name=GYG2P1;source_gene=hg002_chrY_paternal_306;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;gene_id=NA19239_ch_G0000144;gene_biotype=transcribed_pseudogene;gene_name=GYG2P1;gene_sources=liftoff;ID=NA19239_ch_G0000144;Name=GYG2P1
NA19239_chrY	CAT	transcript	13774562	13790035	1000	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=NA19239_ch_T0000355;gene_id=NA19239_ch_G0000144;Parent=NA19239_ch_G0000144;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=NA19239_ch_T0000355;Name=GYG2P1
NA19239_chrY	CAT	exon	13774562	13774946	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=NA19239_ch_T0000355;gene_id=NA19239_ch_G0000144;Parent=NA19239_ch_T0000355;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:NA19239_ch_T0000355:0;Name=GYG2P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	13774947	13775241	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=NA19239_ch_T0000355;gene_id=NA19239_ch_G0000144;Parent=NA19239_ch_T0000355;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=intron:NA19239_ch_T0000355:0;Name=GYG2P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	13775242	13775383	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=NA19239_ch_T0000355;gene_id=NA19239_ch_G0000144;Parent=NA19239_ch_T0000355;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:NA19239_ch_T0000355:1;Name=GYG2P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	13775384	13775638	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=NA19239_ch_T0000355;gene_id=NA19239_ch_G0000144;Parent=NA19239_ch_T0000355;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=intron:NA19239_ch_T0000355:1;Name=GYG2P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	13775639	13775755	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=NA19239_ch_T0000355;gene_id=NA19239_ch_G0000144;Parent=NA19239_ch_T0000355;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:NA19239_ch_T0000355:2;Name=GYG2P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	13775756	13788760	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=NA19239_ch_T0000355;gene_id=NA19239_ch_G0000144;Parent=NA19239_ch_T0000355;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=intron:NA19239_ch_T0000355:2;Name=GYG2P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	13788761	13788899	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=NA19239_ch_T0000355;gene_id=NA19239_ch_G0000144;Parent=NA19239_ch_T0000355;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:NA19239_ch_T0000355:3;Name=GYG2P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	13788900	13789994	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=NA19239_ch_T0000355;gene_id=NA19239_ch_G0000144;Parent=NA19239_ch_T0000355;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=intron:NA19239_ch_T0000355:3;Name=GYG2P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	13789995	13790035	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=NA19239_ch_T0000355;gene_id=NA19239_ch_G0000144;Parent=NA19239_ch_T0000355;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:NA19239_ch_T0000355:4;Name=GYG2P1;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	14029958	14032125	.	-	.	source_gene_common_name=LOC112268311;source_gene=hg002_chrY_paternal_311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;gene_id=NA19239_ch_G0000145;gene_biotype=lncRNA;gene_name=LOC112268311;gene_sources=liftoff;ID=NA19239_ch_G0000145;Name=LOC112268311
NA19239_chrY	CAT	transcript	14029958	14032125	1000	-	.	source_transcript=hg002_chrY_paternal_311.1;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;transcript_id=NA19239_ch_T0000356;gene_id=NA19239_ch_G0000145;Parent=NA19239_ch_G0000145;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=NA19239_ch_T0000356;Name=LOC112268311
NA19239_chrY	CAT	exon	14029958	14031393	.	-	.	source_transcript=hg002_chrY_paternal_311.1;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;transcript_id=NA19239_ch_T0000356;gene_id=NA19239_ch_G0000145;Parent=NA19239_ch_T0000356;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=exon:NA19239_ch_T0000356:0;Name=LOC112268311;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14031394	14032002	.	-	.	source_transcript=hg002_chrY_paternal_311.1;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;transcript_id=NA19239_ch_T0000356;gene_id=NA19239_ch_G0000145;Parent=NA19239_ch_T0000356;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=intron:NA19239_ch_T0000356:0;Name=LOC112268311;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14032003	14032125	.	-	.	source_transcript=hg002_chrY_paternal_311.1;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;transcript_id=NA19239_ch_T0000356;gene_id=NA19239_ch_G0000145;Parent=NA19239_ch_T0000356;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=exon:NA19239_ch_T0000356:1;Name=LOC112268311;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14029958	14032134	1000	-	.	source_transcript=hg002_chrY_paternal_311.2;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.2,hg002_chrY_paternal_311.2;transcript_id=NA19239_ch_T0000357;gene_id=NA19239_ch_G0000145;Parent=NA19239_ch_G0000145;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=NA19239_ch_T0000357;Name=LOC112268311
NA19239_chrY	CAT	exon	14029958	14031393	.	-	.	source_transcript=hg002_chrY_paternal_311.2;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.2,hg002_chrY_paternal_311.2;transcript_id=NA19239_ch_T0000357;gene_id=NA19239_ch_G0000145;Parent=NA19239_ch_T0000357;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=exon:NA19239_ch_T0000357:0;Name=LOC112268311;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14031394	14031945	.	-	.	source_transcript=hg002_chrY_paternal_311.2;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.2,hg002_chrY_paternal_311.2;transcript_id=NA19239_ch_T0000357;gene_id=NA19239_ch_G0000145;Parent=NA19239_ch_T0000357;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=intron:NA19239_ch_T0000357:0;Name=LOC112268311;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14031946	14032134	.	-	.	source_transcript=hg002_chrY_paternal_311.2;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.2,hg002_chrY_paternal_311.2;transcript_id=NA19239_ch_T0000357;gene_id=NA19239_ch_G0000145;Parent=NA19239_ch_T0000357;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=exon:NA19239_ch_T0000357:1;Name=LOC112268311;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	14030994	14060872	.	+	.	source_gene_common_name=TTTY15;source_gene=hg002_chrY_paternal_312;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;gene_id=NA19239_ch_G0000146;gene_biotype=lncRNA;gene_name=TTTY15;gene_sources=liftoff;ID=NA19239_ch_G0000146;Name=TTTY15
NA19239_chrY	CAT	transcript	14030994	14060872	1000	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=NA19239_ch_T0000358;gene_id=NA19239_ch_G0000146;Parent=NA19239_ch_G0000146;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=NA19239_ch_T0000358;Name=TTTY15
NA19239_chrY	CAT	exon	14030994	14031348	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=NA19239_ch_T0000358;gene_id=NA19239_ch_G0000146;Parent=NA19239_ch_T0000358;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:NA19239_ch_T0000358:0;Name=TTTY15;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14031349	14033281	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=NA19239_ch_T0000358;gene_id=NA19239_ch_G0000146;Parent=NA19239_ch_T0000358;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:NA19239_ch_T0000358:0;Name=TTTY15;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14033282	14033328	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=NA19239_ch_T0000358;gene_id=NA19239_ch_G0000146;Parent=NA19239_ch_T0000358;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:NA19239_ch_T0000358:1;Name=TTTY15;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14033329	14055151	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=NA19239_ch_T0000358;gene_id=NA19239_ch_G0000146;Parent=NA19239_ch_T0000358;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:NA19239_ch_T0000358:1;Name=TTTY15;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14055152	14055245	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=NA19239_ch_T0000358;gene_id=NA19239_ch_G0000146;Parent=NA19239_ch_T0000358;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:NA19239_ch_T0000358:2;Name=TTTY15;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14055246	14056102	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=NA19239_ch_T0000358;gene_id=NA19239_ch_G0000146;Parent=NA19239_ch_T0000358;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:NA19239_ch_T0000358:2;Name=TTTY15;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14056103	14060872	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=NA19239_ch_T0000358;gene_id=NA19239_ch_G0000146;Parent=NA19239_ch_T0000358;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:NA19239_ch_T0000358:3;Name=TTTY15;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14030994	14060872	1000	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=NA19239_ch_T0000359;gene_id=NA19239_ch_G0000146;Parent=NA19239_ch_G0000146;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=NA19239_ch_T0000359;Name=TTTY15
NA19239_chrY	CAT	exon	14030994	14031348	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=NA19239_ch_T0000359;gene_id=NA19239_ch_G0000146;Parent=NA19239_ch_T0000359;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:NA19239_ch_T0000359:0;Name=TTTY15;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14031349	14055151	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=NA19239_ch_T0000359;gene_id=NA19239_ch_G0000146;Parent=NA19239_ch_T0000359;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:NA19239_ch_T0000359:0;Name=TTTY15;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14055152	14055245	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=NA19239_ch_T0000359;gene_id=NA19239_ch_G0000146;Parent=NA19239_ch_T0000359;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:NA19239_ch_T0000359:1;Name=TTTY15;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14055246	14056102	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=NA19239_ch_T0000359;gene_id=NA19239_ch_G0000146;Parent=NA19239_ch_T0000359;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:NA19239_ch_T0000359:1;Name=TTTY15;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14056103	14060872	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=NA19239_ch_T0000359;gene_id=NA19239_ch_G0000146;Parent=NA19239_ch_T0000359;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:NA19239_ch_T0000359:2;Name=TTTY15;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14030994	14060872	1000	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=NA19239_ch_T0000360;gene_id=NA19239_ch_G0000146;Parent=NA19239_ch_G0000146;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=NA19239_ch_T0000360;Name=TTTY15
NA19239_chrY	CAT	exon	14030994	14031348	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=NA19239_ch_T0000360;gene_id=NA19239_ch_G0000146;Parent=NA19239_ch_T0000360;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:NA19239_ch_T0000360:0;Name=TTTY15;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14031349	14055151	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=NA19239_ch_T0000360;gene_id=NA19239_ch_G0000146;Parent=NA19239_ch_T0000360;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:NA19239_ch_T0000360:0;Name=TTTY15;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14055152	14055245	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=NA19239_ch_T0000360;gene_id=NA19239_ch_G0000146;Parent=NA19239_ch_T0000360;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:NA19239_ch_T0000360:1;Name=TTTY15;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14055246	14056323	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=NA19239_ch_T0000360;gene_id=NA19239_ch_G0000146;Parent=NA19239_ch_T0000360;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:NA19239_ch_T0000360:1;Name=TTTY15;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14056324	14060872	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=NA19239_ch_T0000360;gene_id=NA19239_ch_G0000146;Parent=NA19239_ch_T0000360;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:NA19239_ch_T0000360:2;Name=TTTY15;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14030994	14060872	1000	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=NA19239_ch_T0000361;gene_id=NA19239_ch_G0000146;Parent=NA19239_ch_G0000146;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=NA19239_ch_T0000361;Name=TTTY15
NA19239_chrY	CAT	exon	14030994	14031348	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=NA19239_ch_T0000361;gene_id=NA19239_ch_G0000146;Parent=NA19239_ch_T0000361;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:NA19239_ch_T0000361:0;Name=TTTY15;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14031349	14033281	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=NA19239_ch_T0000361;gene_id=NA19239_ch_G0000146;Parent=NA19239_ch_T0000361;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:NA19239_ch_T0000361:0;Name=TTTY15;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14033282	14033328	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=NA19239_ch_T0000361;gene_id=NA19239_ch_G0000146;Parent=NA19239_ch_T0000361;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:NA19239_ch_T0000361:1;Name=TTTY15;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14033329	14055151	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=NA19239_ch_T0000361;gene_id=NA19239_ch_G0000146;Parent=NA19239_ch_T0000361;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:NA19239_ch_T0000361:1;Name=TTTY15;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14055152	14055245	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=NA19239_ch_T0000361;gene_id=NA19239_ch_G0000146;Parent=NA19239_ch_T0000361;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:NA19239_ch_T0000361:2;Name=TTTY15;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14055246	14056323	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=NA19239_ch_T0000361;gene_id=NA19239_ch_G0000146;Parent=NA19239_ch_T0000361;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:NA19239_ch_T0000361:2;Name=TTTY15;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14056324	14060872	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=NA19239_ch_T0000361;gene_id=NA19239_ch_G0000146;Parent=NA19239_ch_T0000361;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:NA19239_ch_T0000361:3;Name=TTTY15;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14030994	14060872	1000	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=NA19239_ch_T0000362;gene_id=NA19239_ch_G0000146;Parent=NA19239_ch_G0000146;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=NA19239_ch_T0000362;Name=TTTY15
NA19239_chrY	CAT	exon	14030994	14031348	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=NA19239_ch_T0000362;gene_id=NA19239_ch_G0000146;Parent=NA19239_ch_T0000362;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:NA19239_ch_T0000362:0;Name=TTTY15;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14031349	14033281	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=NA19239_ch_T0000362;gene_id=NA19239_ch_G0000146;Parent=NA19239_ch_T0000362;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:NA19239_ch_T0000362:0;Name=TTTY15;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14033282	14033328	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=NA19239_ch_T0000362;gene_id=NA19239_ch_G0000146;Parent=NA19239_ch_T0000362;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:NA19239_ch_T0000362:1;Name=TTTY15;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14033329	14055151	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=NA19239_ch_T0000362;gene_id=NA19239_ch_G0000146;Parent=NA19239_ch_T0000362;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:NA19239_ch_T0000362:1;Name=TTTY15;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14055152	14055245	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=NA19239_ch_T0000362;gene_id=NA19239_ch_G0000146;Parent=NA19239_ch_T0000362;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:NA19239_ch_T0000362:2;Name=TTTY15;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14055246	14058964	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=NA19239_ch_T0000362;gene_id=NA19239_ch_G0000146;Parent=NA19239_ch_T0000362;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:NA19239_ch_T0000362:2;Name=TTTY15;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14058965	14060872	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=NA19239_ch_T0000362;gene_id=NA19239_ch_G0000146;Parent=NA19239_ch_T0000362;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:NA19239_ch_T0000362:3;Name=TTTY15;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	14069870	14229470	.	+	.	source_gene_common_name=USP9Y;source_gene=hg002_chrY_paternal_313;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;gene_id=NA19239_ch_G0000147;gene_biotype=protein_coding;gene_name=USP9Y;gene_sources=liftoff,augTM;ID=NA19239_ch_G0000147;Name=USP9Y
NA19239_chrY	CAT	transcript	14069870	14229470	100	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_G0000147;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=NA19239_ch_T0000363;Name=USP9Y
NA19239_chrY	CAT	exon	14069870	14070694	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:0;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14070695	14077276	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:0;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14077277	14077336	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:1;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14077337	14078030	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:1;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14078031	14078186	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:2;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14078091	14078186	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:0;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	14078091	14078093	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=start_codon:NA19239_ch_T0000363;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14078187	14089231	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:2;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14089232	14089380	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:3;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14089232	14089380	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:1;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14089381	14090749	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:3;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14090750	14090829	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:4;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14090750	14090829	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:2;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14090830	14093754	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:4;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14093755	14093867	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:5;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14093755	14093867	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:3;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14093868	14095216	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:5;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14095217	14095435	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:6;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14095217	14095435	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:4;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14095436	14104253	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:6;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14104254	14104369	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:7;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14104254	14104369	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:5;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14104370	14104639	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:7;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14104640	14104891	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:8;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14104640	14104891	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:6;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14104892	14105052	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:8;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14105053	14105191	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:9;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14105053	14105191	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:7;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14105192	14106798	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:9;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14106799	14106951	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:10;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14106799	14106951	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:8;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14106952	14108166	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:10;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14108167	14108271	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:11;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14108167	14108271	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:9;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14108272	14125833	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:11;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14125834	14126040	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:12;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14125834	14126040	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:10;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14126041	14127147	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:12;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14127148	14127284	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:13;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14127148	14127284	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:11;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14127285	14129125	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:13;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14129126	14129259	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:14;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14129126	14129259	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:12;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14129260	14139707	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:14;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14139708	14139795	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:15;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14139708	14139795	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:13;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14139796	14142222	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:15;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14142223	14142565	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:16;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14142223	14142565	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:14;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14142566	14144110	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:16;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14144111	14144206	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:17;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14144111	14144206	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:15;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14144207	14145288	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:17;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14145289	14145500	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:18;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14145289	14145500	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:16;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14145501	14146658	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:18;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14146659	14146899	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:19;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14146659	14146899	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:17;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14146900	14147245	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:19;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14147246	14147395	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:20;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14147246	14147395	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:18;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14147396	14148165	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:20;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14148166	14148286	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:21;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14148166	14148286	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:19;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14148287	14154842	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:21;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14154843	14154973	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:22;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14154843	14154973	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:20;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14154974	14155160	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:22;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14155161	14155439	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:23;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14155161	14155439	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:21;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14155440	14159045	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:23;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14159046	14159171	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:24;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14159046	14159171	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:22;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14159172	14160137	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:24;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14160138	14160263	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:25;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14160138	14160263	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:23;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14160264	14161670	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:25;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14161671	14161840	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:26;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14161671	14161840	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:24;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14161841	14178818	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:26;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14178819	14178927	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:27;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14178819	14178927	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:25;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14178928	14179311	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:27;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14179312	14179458	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:28;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14179312	14179458	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:26;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14179459	14180274	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:28;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14180275	14180421	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:29;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14180275	14180421	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:27;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14180422	14181469	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:29;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14181470	14181692	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:30;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14181470	14181692	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:28;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14181693	14184763	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:30;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14184764	14184984	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:31;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14184764	14184984	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:29;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14184985	14187059	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:31;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14187060	14187250	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:32;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14187060	14187250	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:30;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14187251	14202318	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:32;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14202319	14202492	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:33;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14202319	14202492	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:31;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14202493	14206541	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:33;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14206542	14206683	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:34;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14206542	14206683	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:32;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14206684	14208494	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:34;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14208495	14209245	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:35;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14208495	14209245	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:33;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14209246	14209640	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:35;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14209641	14209764	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:36;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14209641	14209764	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:34;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14209765	14210870	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:36;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14210871	14211096	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:37;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14210871	14211096	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:35;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14211097	14211694	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:37;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14211695	14211824	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:38;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14211695	14211824	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:36;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14211825	14214963	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:38;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14214964	14215149	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:39;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14214964	14215149	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:37;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14215150	14215563	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:39;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14215564	14215784	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:40;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14215564	14215784	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:38;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14215785	14215869	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:40;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14215870	14215958	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:41;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14215870	14215958	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:39;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14215959	14224970	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:41;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14224971	14225127	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:42;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14224971	14225127	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:40;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14225128	14225263	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:42;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14225264	14225476	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:43;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14225264	14225476	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:41;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14225477	14226196	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:43;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14226197	14226292	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:44;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14226197	14226292	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:42;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14226293	14227909	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000363:44;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14227910	14229470	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000363:45;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14227910	14228047	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000363:43;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	14228045	14228047	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000363;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000363;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=stop_codon:NA19239_ch_T0000363;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14076496	14229470	100	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_G0000147;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=NA19239_ch_T0000364;Name=USP9Y
NA19239_chrY	CAT	exon	14076496	14076524	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:0;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14076525	14077276	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:0;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14077277	14077336	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:1;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14077337	14078030	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:1;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14078031	14078186	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:2;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14078091	14078186	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:0;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	14078091	14078093	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=start_codon:NA19239_ch_T0000364;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14078187	14089231	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:2;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14089232	14089380	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:3;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14089232	14089380	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:1;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14089381	14090749	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:3;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14090750	14090829	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:4;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14090750	14090829	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:2;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14090830	14093754	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:4;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14093755	14093867	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:5;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14093755	14093867	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:3;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14093868	14095216	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:5;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14095217	14095435	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:6;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14095217	14095435	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:4;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14095436	14104253	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:6;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14104254	14104369	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:7;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14104254	14104369	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:5;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14104370	14104639	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:7;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14104640	14104891	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:8;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14104640	14104891	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:6;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14104892	14105052	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:8;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14105053	14105191	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:9;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14105053	14105191	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:7;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14105192	14106798	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:9;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14106799	14106951	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:10;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14106799	14106951	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:8;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14106952	14108166	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:10;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14108167	14108271	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:11;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14108167	14108271	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:9;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14108272	14125833	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:11;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14125834	14126040	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:12;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14125834	14126040	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:10;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14126041	14127147	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:12;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14127148	14127284	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:13;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14127148	14127284	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:11;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14127285	14129125	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:13;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14129126	14129259	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:14;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14129126	14129259	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:12;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14129260	14139707	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:14;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14139708	14139795	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:15;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14139708	14139795	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:13;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14139796	14142222	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:15;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14142223	14142565	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:16;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14142223	14142565	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:14;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14142566	14144110	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:16;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14144111	14144206	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:17;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14144111	14144206	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:15;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14144207	14145288	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:17;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14145289	14145500	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:18;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14145289	14145500	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:16;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14145501	14146658	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:18;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14146659	14146899	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:19;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14146659	14146899	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:17;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14146900	14147245	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:19;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14147246	14147395	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:20;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14147246	14147395	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:18;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14147396	14148165	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:20;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14148166	14148286	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:21;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14148166	14148286	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:19;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14148287	14154842	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:21;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14154843	14154973	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:22;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14154843	14154973	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:20;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14154974	14155160	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:22;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14155161	14155439	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:23;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14155161	14155439	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:21;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14155440	14159045	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:23;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14159046	14159171	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:24;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14159046	14159171	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:22;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14159172	14160137	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:24;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14160138	14160263	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:25;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14160138	14160263	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:23;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14160264	14161670	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:25;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14161671	14161840	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:26;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14161671	14161840	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:24;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14161841	14178818	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:26;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14178819	14178927	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:27;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14178819	14178927	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:25;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14178928	14179311	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:27;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14179312	14179458	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:28;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14179312	14179458	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:26;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14179459	14180274	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:28;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14180275	14180421	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:29;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14180275	14180421	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:27;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14180422	14181469	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:29;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14181470	14181692	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:30;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14181470	14181692	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:28;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14181693	14184763	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:30;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14184764	14184984	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:31;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14184764	14184984	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:29;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14184985	14187059	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:31;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14187060	14187250	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:32;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14187060	14187250	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:30;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14187251	14202318	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:32;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14202319	14202492	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:33;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14202319	14202492	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:31;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14202493	14206541	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:33;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14206542	14206683	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:34;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14206542	14206683	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:32;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14206684	14208494	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:34;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14208495	14209245	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:35;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14208495	14209245	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:33;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14209246	14209640	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:35;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14209641	14209764	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:36;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14209641	14209764	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:34;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14209765	14210870	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:36;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14210871	14211096	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:37;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14210871	14211096	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:35;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14211097	14211694	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:37;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14211695	14211824	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:38;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14211695	14211824	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:36;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14211825	14214963	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:38;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14214964	14215149	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:39;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14214964	14215149	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:37;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14215150	14215563	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:39;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14215564	14215784	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:40;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14215564	14215784	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:38;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14215785	14215869	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:40;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14215870	14215958	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:41;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14215870	14215958	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:39;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14215959	14224970	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:41;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14224971	14225127	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:42;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14224971	14225127	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:40;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14225128	14225263	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:42;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14225264	14225476	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:43;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14225264	14225476	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:41;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14225477	14226196	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:43;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14226197	14226292	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:44;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14226197	14226292	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:42;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14226293	14227909	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000364:44;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14227910	14229470	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000364:45;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14227910	14228047	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000364:43;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	14228045	14228047	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000364;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000364;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=stop_codon:NA19239_ch_T0000364;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14078099	14229470	100	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_G0000147;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=NA19239_ch_T0000365;Name=USP9Y
NA19239_chrY	CAT	exon	14078099	14078186	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:0;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14078187	14083281	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:0;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14083282	14083432	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:1;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14083433	14089231	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:1;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14089232	14089380	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:2;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14089370	14089380	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:0;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	14089370	14089372	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=start_codon:NA19239_ch_T0000365;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14089381	14090749	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:2;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14090750	14090829	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:3;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14090750	14090829	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:1;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14090830	14093754	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:3;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14093755	14093867	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:4;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14093755	14093867	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:2;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14093868	14095216	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:4;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14095217	14095435	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:5;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14095217	14095435	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:3;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14095436	14104253	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:5;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14104254	14104369	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:6;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14104254	14104369	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:4;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14104370	14104639	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:6;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14104640	14104891	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:7;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14104640	14104891	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:5;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14104892	14105052	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:7;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14105053	14105191	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:8;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14105053	14105191	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:6;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14105192	14106798	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:8;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14106799	14106951	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:9;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14106799	14106951	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:7;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14106952	14108166	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:9;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14108167	14108271	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:10;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14108167	14108271	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:8;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14108272	14125833	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:10;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14125834	14126040	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:11;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14125834	14126040	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:9;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14126041	14127147	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:11;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14127148	14127284	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:12;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14127148	14127284	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:10;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14127285	14129125	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:12;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14129126	14129259	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:13;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14129126	14129259	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:11;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14129260	14139707	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:13;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14139708	14139795	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:14;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14139708	14139795	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:12;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14139796	14142222	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:14;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14142223	14142565	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:15;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14142223	14142565	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:13;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14142566	14144110	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:15;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14144111	14144206	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:16;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14144111	14144206	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:14;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14144207	14145288	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:16;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14145289	14145500	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:17;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14145289	14145500	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:15;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14145501	14146658	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:17;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14146659	14146899	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:18;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14146659	14146899	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:16;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14146900	14147245	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:18;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14147246	14147395	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:19;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14147246	14147395	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:17;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14147396	14148165	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:19;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14148166	14148286	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:20;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14148166	14148286	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:18;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14148287	14154842	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:20;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14154843	14154973	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:21;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14154843	14154973	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:19;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14154974	14155160	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:21;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14155161	14155439	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:22;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14155161	14155439	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:20;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14155440	14159045	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:22;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14159046	14159171	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:23;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14159046	14159171	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:21;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14159172	14160137	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:23;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14160138	14160263	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:24;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14160138	14160263	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:22;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14160264	14161670	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:24;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14161671	14161840	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:25;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14161671	14161840	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:23;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14161841	14178818	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:25;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14178819	14178927	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:26;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14178819	14178927	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:24;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14178928	14179311	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:26;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14179312	14179458	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:27;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14179312	14179458	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:25;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14179459	14180274	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:27;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14180275	14180421	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:28;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14180275	14180421	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:26;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14180422	14181469	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:28;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14181470	14181692	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:29;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14181470	14181692	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:27;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14181693	14184763	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:29;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14184764	14184984	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:30;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14184764	14184984	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:28;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14184985	14187059	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:30;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14187060	14187250	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:31;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14187060	14187250	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:29;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14187251	14202318	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:31;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14202319	14202492	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:32;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14202319	14202492	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:30;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14202493	14206541	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:32;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14206542	14206683	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:33;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14206542	14206683	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:31;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14206684	14208494	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:33;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14208495	14209245	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:34;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14208495	14209245	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:32;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14209246	14209640	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:34;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14209641	14209764	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:35;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14209641	14209764	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:33;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14209765	14210870	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:35;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14210871	14211096	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:36;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14210871	14211096	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:34;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14211097	14211694	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:36;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14211695	14211824	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:37;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14211695	14211824	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:35;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14211825	14214963	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:37;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14214964	14215149	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:38;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14214964	14215149	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:36;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14215150	14215563	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:38;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14215564	14215784	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:39;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14215564	14215784	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:37;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14215785	14215869	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:39;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14215870	14215958	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:40;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14215870	14215958	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:38;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14215959	14224970	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:40;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14224971	14225127	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:41;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14224971	14225127	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:39;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14225128	14225263	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:41;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14225264	14225476	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:42;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14225264	14225476	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:40;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14225477	14226196	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:42;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14226197	14226292	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:43;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14226197	14226292	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:41;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14226293	14227909	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19239_ch_T0000365:43;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14227910	14229470	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19239_ch_T0000365:44;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14227910	14228047	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19239_ch_T0000365:42;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	14228045	14228047	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000365;gene_id=NA19239_ch_G0000147;Parent=NA19239_ch_T0000365;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=stop_codon:NA19239_ch_T0000365;Name=USP9Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	14273486	14289096	.	+	.	source_gene_common_name=DDX3Y;source_gene=hg002_chrY_paternal_315;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;gene_id=NA19239_ch_G0000148;gene_biotype=protein_coding;gene_name=DDX3Y;gene_sources=liftoff,augTM,transMap;ID=NA19239_ch_G0000148;Name=DDX3Y
NA19239_chrY	CAT	transcript	14273486	14289096	1000	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000366;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_G0000148;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=NA19239_ch_T0000366;Name=DDX3Y
NA19239_chrY	CAT	exon	14273486	14273599	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000366;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000366:0;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14273600	14276154	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000366;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000366:0;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14276155	14276212	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000366;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000366:1;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14276213	14277977	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000366;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000366:1;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14277978	14278025	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000366;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000366:2;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14278026	14280456	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000366;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000366:2;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14280457	14280586	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000366;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000366:3;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14280587	14281344	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000366;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000366:3;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14281345	14281680	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000366;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000366:4;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14281681	14282335	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000366;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000366:4;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14282336	14282471	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000366;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000366:5;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14282472	14283181	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000366;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000366:5;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14283182	14283845	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000366;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000366:6;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14283846	14284247	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000366;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000366:6;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14284248	14284392	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000366;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000366:7;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14284393	14284500	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000366;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000366:7;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14284501	14284645	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000366;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000366:8;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14284646	14284878	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000366;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000366:8;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14284879	14285252	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000366;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000366:9;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14285253	14285524	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000366;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000366:9;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14285525	14285678	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000366;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000366:10;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14285679	14286020	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000366;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000366:10;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14286021	14286160	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000366;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000366:11;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14286161	14286660	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000366;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000366:11;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14286661	14289096	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000366;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000366:12;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14273486	14289096	1000	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000367;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_G0000148;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=NA19239_ch_T0000367;Name=DDX3Y
NA19239_chrY	CAT	exon	14273486	14273599	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000367;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000367:0;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14273600	14276154	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000367;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000367:0;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14276155	14276212	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000367;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000367:1;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14276213	14277977	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000367;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000367:1;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14277978	14278025	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000367;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000367:2;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14278026	14280456	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000367;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000367:2;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14280457	14280586	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000367;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000367:3;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14280587	14281344	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000367;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000367:3;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14281345	14281680	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000367;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000367:4;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14281681	14282335	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000367;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000367:4;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14282336	14282471	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000367;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000367:5;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14282472	14283181	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000367;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000367:5;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14283182	14283267	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000367;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000367:6;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14283268	14283501	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000367;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000367:6;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14283502	14283600	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000367;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000367:7;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14283601	14283684	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000367;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000367:7;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14283685	14283845	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000367;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000367:8;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14283846	14284247	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000367;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000367:8;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14284248	14284392	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000367;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000367:9;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14284393	14284500	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000367;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000367:9;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14284501	14284645	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000367;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000367:10;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14284646	14284878	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000367;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000367:10;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14284879	14285252	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000367;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000367:11;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14285253	14285524	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000367;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000367:11;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14285525	14285678	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000367;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000367:12;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14285679	14286020	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000367;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000367:12;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14286021	14286160	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000367;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000367:13;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14286161	14286660	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000367;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000367:13;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14286661	14289096	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000367;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000367:14;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14273486	14289096	1000	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000368;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_G0000148;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=NA19239_ch_T0000368;Name=DDX3Y
NA19239_chrY	CAT	exon	14273486	14273599	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000368;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000368;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000368:0;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14273600	14276154	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000368;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000368;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000368:0;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14276155	14276212	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000368;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000368;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000368:1;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14276213	14277977	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000368;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000368;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000368:1;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14277978	14278025	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000368;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000368;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000368:2;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14278026	14281344	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000368;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000368;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000368:2;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14281345	14281680	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000368;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000368;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000368:3;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14281681	14282335	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000368;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000368;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000368:3;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14282336	14282471	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000368;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000368;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000368:4;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14282472	14283181	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000368;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000368;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000368:4;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14283182	14283845	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000368;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000368;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000368:5;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14283846	14284247	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000368;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000368;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000368:5;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14284248	14284392	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000368;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000368;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000368:6;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14284393	14284500	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000368;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000368;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000368:6;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14284501	14284645	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000368;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000368;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000368:7;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14284646	14284878	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000368;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000368;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000368:7;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14284879	14285252	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000368;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000368;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000368:8;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14285253	14285524	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000368;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000368;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000368:8;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14285525	14285678	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000368;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000368;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000368:9;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14285679	14286020	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000368;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000368;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000368:9;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14286021	14286160	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000368;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000368;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000368:10;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14286161	14286660	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000368;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000368;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000368:10;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14286661	14289096	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000368;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000368;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000368:11;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14273486	14289096	1000	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000369;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_G0000148;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=NA19239_ch_T0000369;Name=DDX3Y
NA19239_chrY	CAT	exon	14273486	14273599	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000369;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000369;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000369:0;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14273600	14276154	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000369;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000369;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000369:0;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14276155	14276212	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000369;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000369;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000369:1;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14276213	14277977	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000369;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000369;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000369:1;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14277978	14278025	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000369;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000369;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000369:2;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14278026	14280456	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000369;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000369;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000369:2;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14280457	14280586	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000369;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000369;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000369:3;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14280587	14281344	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000369;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000369;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000369:3;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14281345	14281680	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000369;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000369;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000369:4;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14281681	14282335	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000369;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000369;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000369:4;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14282336	14282471	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000369;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000369;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000369:5;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14282472	14283181	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000369;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000369;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000369:5;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14283182	14283845	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000369;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000369;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000369:6;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14283846	14284247	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000369;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000369;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000369:6;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14284248	14284392	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000369;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000369;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000369:7;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14284393	14284500	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000369;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000369;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000369:7;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14284501	14284645	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000369;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000369;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000369:8;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14284646	14284878	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000369;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000369;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000369:8;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14284879	14285252	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000369;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000369;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000369:9;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14285253	14285593	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000369;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000369;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000369:9;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14285594	14285678	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000369;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000369;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000369:10;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14285679	14286020	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000369;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000369;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000369:10;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14286021	14286160	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000369;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000369;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000369:11;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14286161	14286660	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000369;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000369;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000369:11;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14286661	14289096	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000369;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000369;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000369:12;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14273486	14289096	1000	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000370;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_G0000148;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=NA19239_ch_T0000370;Name=DDX3Y
NA19239_chrY	CAT	exon	14273486	14273599	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000370;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000370;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000370:0;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14273600	14276154	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000370;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000370;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000370:0;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14276155	14276212	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000370;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000370;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000370:1;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14276213	14277977	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000370;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000370;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000370:1;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14277978	14278025	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000370;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000370;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000370:2;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14278026	14280456	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000370;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000370;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000370:2;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14280457	14280586	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000370;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000370;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000370:3;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14280587	14281344	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000370;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000370;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000370:3;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14281345	14281680	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000370;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000370;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000370:4;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14281681	14282335	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000370;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000370;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000370:4;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14282336	14282471	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000370;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000370;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000370:5;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14282472	14283181	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000370;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000370;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000370:5;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14283182	14283267	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000370;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000370;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000370:6;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14283268	14283501	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000370;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000370;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000370:6;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14283502	14283600	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000370;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000370;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000370:7;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14283601	14283701	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000370;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000370;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000370:7;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14283702	14283845	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000370;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000370;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000370:8;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14283846	14284247	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000370;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000370;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000370:8;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14284248	14284392	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000370;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000370;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000370:9;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14284393	14284500	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000370;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000370;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000370:9;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14284501	14284645	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000370;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000370;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000370:10;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14284646	14284878	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000370;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000370;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000370:10;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14284879	14285252	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000370;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000370;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000370:11;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14285253	14285524	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000370;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000370;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000370:11;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14285525	14285678	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000370;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000370;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000370:12;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14285679	14286020	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000370;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000370;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000370:12;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14286021	14286160	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000370;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000370;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000370:13;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14286161	14286660	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000370;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000370;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000370:13;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14286661	14289096	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000370;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000370;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000370:14;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14274323	14289096	1000	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000371;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_G0000148;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=NA19239_ch_T0000371;Name=DDX3Y
NA19239_chrY	CAT	exon	14274323	14274433	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000371;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000371;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000371:0;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14274434	14276154	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000371;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000371;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000371:0;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14276155	14276212	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000371;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000371;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000371:1;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14276213	14277977	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000371;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000371;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000371:1;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14277978	14278025	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000371;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000371;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000371:2;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14278026	14280456	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000371;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000371;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000371:2;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14280457	14280586	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000371;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000371;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000371:3;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14280587	14281344	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000371;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000371;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000371:3;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14281345	14281680	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000371;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000371;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000371:4;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14281681	14282335	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000371;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000371;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000371:4;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14282336	14282471	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000371;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000371;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000371:5;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14282472	14283181	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000371;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000371;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000371:5;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14283182	14283267	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000371;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000371;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000371:6;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14283268	14283501	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000371;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000371;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000371:6;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14283502	14283600	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000371;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000371;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000371:7;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14283601	14283684	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000371;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000371;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000371:7;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14283685	14283845	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000371;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000371;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000371:8;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14283846	14284247	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000371;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000371;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000371:8;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14284248	14284392	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000371;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000371;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000371:9;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14284393	14284500	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000371;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000371;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000371:9;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14284501	14284645	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000371;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000371;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000371:10;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14284646	14284878	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000371;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000371;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000371:10;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14284879	14285252	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000371;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000371;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000371:11;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14285253	14285524	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000371;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000371;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000371:11;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14285525	14285678	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000371;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000371;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000371:12;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14285679	14286020	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000371;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000371;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000371:12;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14286021	14286160	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000371;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000371;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000371:13;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14286161	14286660	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000371;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000371;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000371:13;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14286661	14289096	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000371;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000371;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000371:14;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14274323	14289096	1000	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000372;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_G0000148;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=NA19239_ch_T0000372;Name=DDX3Y
NA19239_chrY	CAT	exon	14274323	14274433	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000372;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000372;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000372:0;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14274434	14276154	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000372;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000372;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000372:0;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14276155	14276212	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000372;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000372;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000372:1;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14276213	14277977	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000372;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000372;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000372:1;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14277978	14278025	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000372;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000372;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000372:2;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14278026	14280456	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000372;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000372;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000372:2;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14280457	14280586	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000372;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000372;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000372:3;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14280587	14281344	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000372;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000372;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000372:3;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14281345	14281680	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000372;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000372;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000372:4;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14281681	14282335	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000372;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000372;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000372:4;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14282336	14282471	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000372;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000372;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000372:5;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14282472	14283181	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000372;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000372;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000372:5;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14283182	14283845	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000372;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000372;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000372:6;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14283846	14284247	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000372;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000372;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000372:6;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14284248	14284392	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000372;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000372;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000372:7;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14284393	14284500	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000372;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000372;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000372:7;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14284501	14284645	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000372;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000372;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000372:8;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14284646	14284878	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000372;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000372;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000372:8;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14284879	14285252	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000372;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000372;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000372:9;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14285253	14285524	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000372;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000372;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000372:9;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14285525	14285678	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000372;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000372;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000372:10;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14285679	14286020	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000372;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000372;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000372:10;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14286021	14286160	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000372;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000372;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000372:11;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14286161	14286660	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000372;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000372;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000372:11;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14286661	14289096	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000372;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000372;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000372:12;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14276187	14289096	9960	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_G0000148;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=NA19239_ch_T0000373;Name=DDX3Y
NA19239_chrY	CAT	exon	14276187	14276212	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000373:0;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14276213	14277977	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000373:0;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14277978	14278025	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000373:1;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14278026	14281344	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000373:1;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14281345	14281680	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000373:2;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14281681	14282335	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000373:2;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14282336	14282471	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000373:3;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14282351	14282471	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:NA19239_ch_T0000373:0;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	14282351	14282353	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=start_codon:NA19239_ch_T0000373;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14282472	14283181	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000373:3;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14283182	14283267	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000373:4;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14283182	14283267	.	+	2	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:NA19239_ch_T0000373:1;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14283268	14283501	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000373:4;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14283502	14283600	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000373:5;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14283502	14283600	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:NA19239_ch_T0000373:2;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14283601	14283684	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000373:5;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14283685	14283845	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000373:6;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14283685	14283845	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:NA19239_ch_T0000373:3;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14283846	14284247	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000373:6;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14284248	14284392	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000373:7;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14284248	14284392	.	+	1	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:NA19239_ch_T0000373:4;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14284393	14284500	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000373:7;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14284501	14284645	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000373:8;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14284501	14284645	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:NA19239_ch_T0000373:5;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14284646	14284878	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000373:8;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14284879	14285060	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000373:9;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14284879	14285060	.	+	2	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:NA19239_ch_T0000373:6;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14285061	14285134	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000373:9;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14285135	14285252	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000373:10;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14285135	14285252	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:NA19239_ch_T0000373:7;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14285253	14285524	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000373:10;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14285525	14285678	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000373:11;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14285525	14285678	.	+	2	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:NA19239_ch_T0000373:8;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14285679	14286020	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000373:11;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14286021	14286160	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000373:12;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14286021	14286160	.	+	1	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:NA19239_ch_T0000373:9;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14286161	14286660	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:NA19239_ch_T0000373:12;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14286661	14289096	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:NA19239_ch_T0000373:13;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	14286661	14286740	.	+	2	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:NA19239_ch_T0000373:10;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	14286738	14286740	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000373;gene_id=NA19239_ch_G0000148;Parent=NA19239_ch_T0000373;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=stop_codon:NA19239_ch_T0000373;Name=DDX3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	14479940	14494255	.	+	.	source_gene_common_name=LOC112268312;source_gene=hg002_chrY_paternal_318;alternative_source_transcripts=hg002_chrY_paternal_318.1;gene_id=NA19239_ch_G0000149;gene_biotype=lncRNA;gene_name=LOC112268312;gene_sources=transMap;ID=NA19239_ch_G0000149;Name=LOC112268312
NA19239_chrY	CAT	transcript	14479940	14487522	1000	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=NA19239_ch_T0000374;gene_id=NA19239_ch_G0000149;Parent=NA19239_ch_G0000149;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=NA19239_ch_T0000374;Name=LOC112268312
NA19239_chrY	CAT	exon	14479940	14480028	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=NA19239_ch_T0000374;gene_id=NA19239_ch_G0000149;Parent=NA19239_ch_T0000374;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:NA19239_ch_T0000374:0;Name=LOC112268312;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14480029	14480214	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=NA19239_ch_T0000374;gene_id=NA19239_ch_G0000149;Parent=NA19239_ch_T0000374;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:NA19239_ch_T0000374:0;Name=LOC112268312;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14480215	14480377	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=NA19239_ch_T0000374;gene_id=NA19239_ch_G0000149;Parent=NA19239_ch_T0000374;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:NA19239_ch_T0000374:1;Name=LOC112268312;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14480378	14486323	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=NA19239_ch_T0000374;gene_id=NA19239_ch_G0000149;Parent=NA19239_ch_T0000374;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:NA19239_ch_T0000374:1;Name=LOC112268312;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14486324	14487522	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=NA19239_ch_T0000374;gene_id=NA19239_ch_G0000149;Parent=NA19239_ch_T0000374;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:NA19239_ch_T0000374:2;Name=LOC112268312;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14479940	14494255	1000	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=NA19239_ch_T0000375;gene_id=NA19239_ch_G0000149;Parent=NA19239_ch_G0000149;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=NA19239_ch_T0000375;Name=LOC112268312
NA19239_chrY	CAT	exon	14479940	14480028	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=NA19239_ch_T0000375;gene_id=NA19239_ch_G0000149;Parent=NA19239_ch_T0000375;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:NA19239_ch_T0000375:0;Name=LOC112268312;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14480029	14480214	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=NA19239_ch_T0000375;gene_id=NA19239_ch_G0000149;Parent=NA19239_ch_T0000375;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:NA19239_ch_T0000375:0;Name=LOC112268312;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14480215	14480377	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=NA19239_ch_T0000375;gene_id=NA19239_ch_G0000149;Parent=NA19239_ch_T0000375;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:NA19239_ch_T0000375:1;Name=LOC112268312;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14480378	14486323	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=NA19239_ch_T0000375;gene_id=NA19239_ch_G0000149;Parent=NA19239_ch_T0000375;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:NA19239_ch_T0000375:1;Name=LOC112268312;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14486324	14486460	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=NA19239_ch_T0000375;gene_id=NA19239_ch_G0000149;Parent=NA19239_ch_T0000375;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:NA19239_ch_T0000375:2;Name=LOC112268312;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14486461	14493888	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=NA19239_ch_T0000375;gene_id=NA19239_ch_G0000149;Parent=NA19239_ch_T0000375;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:NA19239_ch_T0000375:2;Name=LOC112268312;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14493889	14494255	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=NA19239_ch_T0000375;gene_id=NA19239_ch_G0000149;Parent=NA19239_ch_T0000375;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:NA19239_ch_T0000375:3;Name=LOC112268312;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14480062	14487522	1000	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=NA19239_ch_T0000376;gene_id=NA19239_ch_G0000149;Parent=NA19239_ch_G0000149;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=NA19239_ch_T0000376;Name=LOC112268312
NA19239_chrY	CAT	exon	14480062	14480080	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=NA19239_ch_T0000376;gene_id=NA19239_ch_G0000149;Parent=NA19239_ch_T0000376;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:NA19239_ch_T0000376:0;Name=LOC112268312;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14480081	14480214	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=NA19239_ch_T0000376;gene_id=NA19239_ch_G0000149;Parent=NA19239_ch_T0000376;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:NA19239_ch_T0000376:0;Name=LOC112268312;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14480215	14480377	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=NA19239_ch_T0000376;gene_id=NA19239_ch_G0000149;Parent=NA19239_ch_T0000376;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:NA19239_ch_T0000376:1;Name=LOC112268312;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14480378	14486323	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=NA19239_ch_T0000376;gene_id=NA19239_ch_G0000149;Parent=NA19239_ch_T0000376;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:NA19239_ch_T0000376:1;Name=LOC112268312;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14486324	14487522	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=NA19239_ch_T0000376;gene_id=NA19239_ch_G0000149;Parent=NA19239_ch_T0000376;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:NA19239_ch_T0000376:2;Name=LOC112268312;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	14602507	14849301	.	-	.	source_gene_common_name=UTY;source_gene=hg002_chrY_paternal_321;alternative_source_transcripts=hg002_chrY_paternal_321.4;gene_id=NA19239_ch_G0000150;gene_biotype=protein_coding;gene_name=UTY;gene_sources=liftoff,augTM,transMap;ID=NA19239_ch_G0000150;Name=UTY
NA19239_chrY	CAT	transcript	14602507	14848664	1000	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000377;Name=UTY
NA19239_chrY	CAT	exon	14602507	14603438	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000377:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14603439	14619614	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000377:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619615	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000377:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000377:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000377:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000377:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000377:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000377:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000377:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000377:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000377:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000377:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000377:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000377:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000377:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000377:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000377:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000377:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000377:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000377:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000377:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000377:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000377:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000377:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000377:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000377:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000377:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14727080	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000377:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14727081	14727236	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000377:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14727237	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000377:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000377:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000377:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000377:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000377:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000377:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000377:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000377:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000377:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000377:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000377:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000377:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000377:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000377:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000377:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000377:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000377:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000377:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000377:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000377:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000377:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000377:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000377:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14848664	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000377;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000377:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000378;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000378:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619629	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000378:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619630	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000378:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000378:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000378:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000378:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000378:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000378:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000378:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000378:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000378:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000378:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000378:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000378:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000378:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000378:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000378:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000378:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000378:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000378:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000378:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000378:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000378:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000378:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000378:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000378:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000378:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000378:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000378:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000378:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000378:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000378:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000378:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000378:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000378:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000378:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000378:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000378:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000378:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000378:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000378:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000378:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000378:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000378:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000378:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000378:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000378:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000378:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000378:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000378:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000378;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000378:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000379;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000379:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619629	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000379:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619630	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000379:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000379:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000379:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000379:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000379:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000379:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000379:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000379:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000379:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000379:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000379:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000379:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000379:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000379:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000379:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000379:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000379:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000379:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000379:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14704179	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000379:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14704180	14704952	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000379:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14704953	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000379:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000379:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000379:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000379:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000379:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000379:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000379:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000379:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000379:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000379:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000379:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000379:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000379:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000379:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000379:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000379:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000379:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000379:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14772394	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000379:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14772395	14772500	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000379:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14772501	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000379:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000379:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000379:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000379:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000379:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000379:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000379:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000379:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000379:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000379:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000379:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000379;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000379:27;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000380;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000380:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619629	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000380:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619630	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000380:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000380:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000380:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000380:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000380:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000380:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000380:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000380:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000380:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000380:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000380:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674267	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000380:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674268	14674335	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000380:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674336	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000380:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000380:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000380:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000380:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000380:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000380:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000380:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000380:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14704179	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000380:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14704180	14704952	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000380:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14704953	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000380:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000380:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000380:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000380:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000380:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000380:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14727704	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000380:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14727705	14727839	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000380:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14727840	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000380:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000380:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000380:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000380:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000380:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000380:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737877	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000380:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737878	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000380:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000380:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000380:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000380:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000380:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14772394	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000380:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14772395	14772500	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000380:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14772501	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000380:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000380:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000380:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000380:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000380:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000380:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000380:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000380:27;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000380:27;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000380:28;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000380:28;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000380;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000380:29;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000381;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000381:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619614	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000381:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619615	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000381:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000381:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000381:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000381:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000381:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000381:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000381:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000381:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000381:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000381:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000381:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000381:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000381:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000381:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000381:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000381:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000381:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000381:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000381:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14702834	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000381:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14702835	14702957	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000381:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14702958	14704179	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000381:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14704180	14704952	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000381:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14704953	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000381:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000381:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000381:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000381:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000381:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000381:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000381:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000381:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000381:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000381:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000381:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000381:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000381:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000381:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000381:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000381:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000381:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000381:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000381:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000381:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000381:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000381:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000381:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000381:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000381:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000381:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000381:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000381:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000381:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000381;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000381:27;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000382;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000382:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619629	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000382:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619630	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000382:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000382:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000382:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000382:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000382:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000382:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000382:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000382:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000382:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000382:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000382:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000382:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000382:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000382:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000382:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000382:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000382:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000382:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000382:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14704179	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000382:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14704180	14704952	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000382:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14704953	14723991	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000382:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723992	14724145	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000382:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724146	14724254	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000382:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724255	14724320	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000382:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724321	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000382:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000382:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000382:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000382:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14727704	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000382:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14727705	14727839	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000382:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14727840	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000382:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000382:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000382:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000382:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000382:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000382:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000382:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000382:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000382:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000382:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000382:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000382:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000382:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000382:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000382:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000382:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000382:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000382:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000382:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000382:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000382:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000382;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000382:27;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000383;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000383:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000383:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000383:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000383:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000383:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000383:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000383:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000383:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000383:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000383:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000383:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000383:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000383:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000383:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000383:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000383:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000383:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000383:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000383:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14704179	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000383:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14704180	14704417	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000383:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14704418	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000383:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000383:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000383:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000383:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000383:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000383:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14727704	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000383:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14727705	14727839	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000383:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14727840	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000383:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000383:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000383:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000383:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000383:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000383:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000383:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000383:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000383:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000383:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000383:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000383:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000383:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000383:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000383:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000383:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000383:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000383:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000383:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000383:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000383:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000383:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000383:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000383;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000383:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000384;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000384:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619629	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000384:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619630	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000384:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000384:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000384:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000384:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000384:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000384:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000384:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000384:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000384:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000384:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000384:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000384:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000384:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000384:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000384:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000384:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000384:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000384:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000384:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14704179	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000384:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14704180	14704952	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000384:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14704953	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000384:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000384:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000384:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000384:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000384:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000384:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000384:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000384:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000384:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000384:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000384:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000384:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000384:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000384:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000384:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000384:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000384:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000384:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000384:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000384:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000384:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000384:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000384:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000384:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000384:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000384:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000384:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000384;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000384:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000385;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000385:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619629	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000385:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619630	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000385:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000385:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000385:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000385:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000385:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000385:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000385:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000385:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000385:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000385:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000385:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000385:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000385:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000385:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000385:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000385:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000385:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000385:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000385:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14704179	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000385:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14704180	14704952	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000385:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14704953	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000385:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000385:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000385:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000385:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000385:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000385:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000385:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000385:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000385:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000385:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000385:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000385:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000385:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000385:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000385:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000385:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000385:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000385:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000385:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000385:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000385:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000385:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000385:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000385:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000385:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000385:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14844533	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000385:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14844534	14844656	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000385:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14844657	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000385:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000385:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000385:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000385;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000385:27;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000386;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000386:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619629	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000386:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619630	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000386:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000386:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000386:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000386:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000386:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000386:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000386:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000386:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000386:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000386:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000386:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000386:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000386:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000386:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000386:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000386:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000386:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000386:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000386:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14704179	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000386:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14704180	14704417	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000386:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14704418	14723991	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000386:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723992	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000386:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000386:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000386:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000386:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000386:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000386:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000386:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000386:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000386:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000386:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000386:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000386:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000386:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000386:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000386:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000386:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000386:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000386:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000386:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000386:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000386:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000386:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000386:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000386:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000386:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000386:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000386:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000386:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000386;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000386:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000387;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000387:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619629	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000387:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619630	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000387:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000387:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000387:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14646855	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000387:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14646856	14646960	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000387:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14646961	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000387:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000387:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000387:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000387:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000387:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000387:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000387:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000387:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000387:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000387:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000387:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000387:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000387:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000387:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000387:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000387:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000387:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000387:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000387:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000387:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000387:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000387:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000387:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000387:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000387:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729097	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000387:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729098	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000387:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000387:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000387:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000387:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000387:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000387:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000387:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000387:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000387:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000387:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000387:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000387:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000387:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000387:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000387:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000387:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000387:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000387:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000387:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000387;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000387:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000388;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000388:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619629	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000388:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619630	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000388:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000388:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000388:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000388:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000388:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000388:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000388:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000388:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000388:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000388:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000388:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000388:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000388:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000388:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000388:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000388:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000388:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000388:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000388:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000388:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000388:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000388:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000388:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000388:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000388:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14726927	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000388:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726928	14727063	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000388:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14727064	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000388:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000388:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000388:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000388:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000388:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000388:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000388:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000388:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000388:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000388:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000388:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000388:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000388:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000388:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000388:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000388:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000388:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000388:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000388:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000388:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000388:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000388:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000388:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000388;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000388:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000389;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000389:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619629	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000389:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619630	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000389:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000389:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000389:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000389:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000389:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000389:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000389:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000389:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000389:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000389:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000389:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000389:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000389:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000389:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000389:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000389:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000389:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000389:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000389:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14704179	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000389:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14704180	14704952	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000389:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14704953	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000389:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000389:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000389:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000389:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000389:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000389:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14726927	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000389:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726928	14727138	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000389:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14727139	14727704	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000389:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14727705	14727839	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000389:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14727840	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000389:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000389:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000389:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000389:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000389:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000389:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000389:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000389:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000389:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000389:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000389:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000389:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000389:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000389:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000389:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000389:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000389:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000389:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000389:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000389:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000389:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000389:27;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000389:27;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000389;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000389:28;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000390;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000390:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619629	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000390:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619630	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000390:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000390:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000390:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000390:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000390:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000390:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000390:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000390:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000390:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000390:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000390:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674267	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000390:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674268	14674335	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000390:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674336	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000390:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000390:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000390:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000390:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000390:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000390:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000390:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000390:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000390:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000390:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000390:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000390:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000390:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000390:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14727704	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000390:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14727705	14727839	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000390:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14727840	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000390:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000390:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000390:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729097	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000390:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729098	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000390:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000390:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000390:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000390:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000390:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000390:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000390:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000390:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000390:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000390:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000390:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000390:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000390:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000390:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000390:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000390:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000390:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000390:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000390:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000390;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000390:27;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000391;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000391:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619629	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000391:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619630	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000391:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000391:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000391:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000391:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000391:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000391:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000391:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000391:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000391:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000391:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000391:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000391:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000391:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000391:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000391:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000391:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000391:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000391:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000391:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14704179	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000391:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14704180	14704952	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000391:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14704953	14723991	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000391:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723992	14724145	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000391:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724146	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000391:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000391:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000391:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000391:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000391:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000391:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000391:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000391:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000391:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000391:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000391:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000391:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000391:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000391:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000391:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000391:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000391:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000391:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000391:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000391:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000391:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000391:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000391:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000391:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000391:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000391:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000391:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000391;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000391:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000392;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000392:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619629	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000392:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619630	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000392:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000392:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000392:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000392:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000392:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000392:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000392:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000392:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000392:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000392:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000392:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674267	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000392:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674268	14674335	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000392:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674336	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000392:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000392:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000392:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000392:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000392:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000392:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000392:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000392:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000392:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000392:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000392:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000392:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000392:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000392:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000392:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000392:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000392:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000392:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000392:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000392:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000392:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000392:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000392:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000392:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000392:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000392:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000392:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000392:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000392:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000392:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000392:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000392:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000392:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000392:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000392:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000392:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000392:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000392;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000392:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000393;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000393:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619629	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000393:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619630	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000393:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000393:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000393:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000393:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000393:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000393:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000393:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000393:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000393:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000393:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000393:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000393:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000393:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000393:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000393:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000393:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000393:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000393:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000393:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000393:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000393:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000393:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000393:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000393:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000393:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14727704	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000393:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14727705	14727839	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000393:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14727840	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000393:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000393:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000393:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000393:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000393:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000393:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000393:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000393:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000393:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000393:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000393:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000393:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000393:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000393:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000393:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000393:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000393:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000393:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000393:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000393:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000393:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000393:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000393:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000393;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000393:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000394;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000394:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619629	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000394:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619630	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000394:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000394:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000394:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000394:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000394:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000394:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000394:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000394:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000394:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000394:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000394:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000394:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000394:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000394:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000394:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000394:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000394:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000394:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000394:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000394:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000394:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000394:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000394:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000394:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000394:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14727080	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000394:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14727081	14727236	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000394:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14727237	14727704	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000394:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14727705	14727839	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000394:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14727840	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000394:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000394:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000394:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000394:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000394:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000394:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000394:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000394:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000394:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000394:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000394:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000394:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000394:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000394:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000394:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000394:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000394:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000394:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000394:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000394:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000394:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000394:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000394:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000394;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000394:27;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000395;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000395:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619629	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000395:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619630	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000395:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000395:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000395:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000395:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000395:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000395:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000395:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000395:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000395:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000395:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000395:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000395:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000395:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000395:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000395:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000395:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000395:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000395:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000395:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000395:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000395:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000395:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000395:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14727080	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000395:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14727081	14727236	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000395:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14727237	14727704	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000395:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14727705	14727839	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000395:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14727840	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000395:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000395:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000395:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000395:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000395:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000395:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000395:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000395:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000395:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000395:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000395:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000395:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000395:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000395:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000395:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000395:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000395:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000395:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000395:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000395:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000395:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000395;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000395:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000396;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000396:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619629	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000396:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619630	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000396:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000396:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000396:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000396:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000396:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000396:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000396:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14668615	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000396:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14668616	14668683	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000396:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14668684	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000396:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000396:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000396:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000396:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000396:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000396:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000396:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000396:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000396:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000396:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000396:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000396:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000396:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000396:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000396:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000396:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000396:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000396:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14727080	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000396:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14727081	14727170	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000396:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14727171	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000396:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000396:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000396:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000396:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000396:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000396:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000396:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000396:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000396:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000396:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000396:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000396:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14768549	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000396:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14768550	14768663	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000396:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14768664	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000396:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000396:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000396:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000396:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000396:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000396:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000396:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000396:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000396:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000396:27;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000396:27;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000396;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000396:28;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000397;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000397:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619614	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000397:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619615	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000397:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000397:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000397:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000397:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000397:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000397:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000397:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14668615	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000397:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14668616	14668683	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000397:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14668684	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000397:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000397:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000397:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000397:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000397:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000397:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000397:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000397:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000397:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000397:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000397:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000397:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000397:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000397:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000397:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000397:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000397:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000397:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14727080	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000397:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14727081	14727138	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000397:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14727139	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000397:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000397:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000397:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000397:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000397:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000397:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000397:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000397:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000397:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000397:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000397:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000397:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000397:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000397:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000397:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000397:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000397:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000397:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000397:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000397:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000397:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000397:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000397:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000397;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000397:27;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000398;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000398:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619629	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000398:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619630	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000398:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000398:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000398:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000398:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000398:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000398:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000398:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000398:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000398:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000398:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674100	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000398:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674101	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000398:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000398:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000398:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000398:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000398:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000398:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000398:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000398:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000398:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000398:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000398:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000398:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000398:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000398:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000398:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000398:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000398:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000398:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000398:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000398:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000398:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000398:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000398:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000398:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000398:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000398:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14768549	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000398:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14768550	14768663	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000398:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14768664	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000398:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000398:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000398:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000398:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000398:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000398:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000398:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000398:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000398:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000398:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000398:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000398;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000398:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000399;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000399:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619629	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000399:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619630	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000399:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000399:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000399:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000399:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000399:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000399:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000399:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000399:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000399:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14672796	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000399:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14672797	14672825	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000399:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14672826	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000399:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000399:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000399:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000399:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000399:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000399:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000399:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000399:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694959	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000399:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694960	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000399:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000399:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000399:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000399:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000399:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000399:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000399:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14727080	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000399:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14727081	14727236	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000399:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14727237	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000399:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000399:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000399:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000399:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000399:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000399:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000399:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000399:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000399:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000399:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000399:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000399:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14772394	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000399:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14772395	14772500	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000399:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14772501	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000399:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000399:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000399:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000399:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000399:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000399:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000399:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000399:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000399:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000399:27;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000399:27;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000399;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000399:28;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000400;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000400:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619629	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000400:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619630	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000400:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000400:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000400:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000400:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000400:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000400:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000400:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14668591	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000400:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14668592	14668683	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000400:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14668684	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000400:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000400:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000400:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000400:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000400:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000400:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000400:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000400:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000400:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000400:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000400:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000400:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14704179	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000400:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14704180	14704952	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000400:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14704953	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000400:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14723709	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000400:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14723710	14723991	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000400:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723992	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000400:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000400:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000400:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000400:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000400:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14727080	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000400:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14727081	14727236	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000400:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14727237	14727704	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000400:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14727705	14727839	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000400:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14727840	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000400:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000400:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000400:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000400:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000400:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000400:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000400:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000400:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000400:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000400:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000400:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000400:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000400:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000400:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000400:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000400:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000400:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000400:27;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000400:27;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000400:28;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000400:28;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000400:29;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000400:29;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000400;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000400:30;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000401;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000401:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000401:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000401:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000401:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000401:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000401:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000401:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000401:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000401:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000401:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000401:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000401:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000401:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000401:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000401:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000401:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000401:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000401:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000401:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000401:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000401:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000401:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000401:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000401:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000401:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14727080	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000401:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14727081	14727138	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000401:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14727139	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000401:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000401:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000401:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000401:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000401:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000401:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000401:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000401:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000401:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000401:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000401:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000401:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000401:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000401:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000401:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000401:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000401:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000401:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000401:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000401:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000401:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000401:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000401:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000401;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000401:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000402;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000402:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000402:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000402:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000402:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000402:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000402:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000402:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000402:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000402:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000402:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000402:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000402:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000402:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000402:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000402:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000402:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000402:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000402:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000402:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000402:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000402:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000402:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000402:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000402:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000402:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14727704	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000402:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14727705	14727839	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000402:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14727840	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000402:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000402:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000402:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000402:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000402:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000402:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000402:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000402:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000402:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000402:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000402:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000402:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000402:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000402:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000402:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000402:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000402:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000402:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000402:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000402:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000402:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000402:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000402:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000402;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000402:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000403;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000403:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619629	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000403:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619630	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000403:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000403:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000403:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000403:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000403:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000403:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000403:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000403:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000403:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000403:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000403:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000403:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000403:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000403:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000403:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000403:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000403:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694959	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000403:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694960	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000403:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000403:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000403:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000403:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000403:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000403:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000403:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14727080	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000403:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14727081	14727236	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000403:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14727237	14727704	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000403:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14727705	14727839	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000403:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14727840	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000403:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000403:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000403:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000403:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000403:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000403:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000403:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000403:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000403:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000403:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14772394	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000403:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14772395	14772500	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000403:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14772501	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000403:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000403:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000403:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000403:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000403:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000403:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000403:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000403:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000403:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000403:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000403:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000403;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000403:27;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000404;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000404:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619629	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000404:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619630	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000404:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000404:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000404:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000404:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000404:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000404:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000404:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000404:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000404:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000404:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000404:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000404:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000404:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000404:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000404:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000404:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000404:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000404:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000404:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000404:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000404:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000404:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000404:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000404:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000404:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14727080	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000404:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14727081	14727236	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000404:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14727237	14727704	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000404:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14727705	14727839	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000404:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14727840	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000404:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000404:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000404:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000404:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000404:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000404:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000404:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000404:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000404:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000404:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000404:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000404:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000404:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000404:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000404:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000404:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000404:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000404:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000404:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000404:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000404:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000404;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000404:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000405;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000405:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619614	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000405:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619615	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000405:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000405:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000405:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000405:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000405:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000405:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000405:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14668615	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000405:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14668616	14668683	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000405:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14668684	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000405:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000405:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000405:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000405:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000405:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000405:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000405:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000405:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000405:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000405:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000405:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000405:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000405:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000405:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000405:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000405:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000405:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000405:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14727704	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000405:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14727705	14727839	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000405:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14727840	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000405:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000405:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000405:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000405:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000405:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000405:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000405:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000405:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000405:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000405:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000405:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000405:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000405:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000405:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000405:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000405:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000405:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000405:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000405:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000405:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000405:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000405:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000405:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000405;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000405:27;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000406;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000406:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619614	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000406:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619615	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000406:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000406:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000406:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000406:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000406:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000406:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000406:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000406:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000406:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000406:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000406:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000406:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000406:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000406:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000406:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000406:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000406:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000406:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000406:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14704179	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000406:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14704180	14704952	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000406:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14704953	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000406:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000406:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000406:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000406:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000406:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000406:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000406:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000406:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000406:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000406:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000406:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000406:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000406:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000406:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000406:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000406:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000406:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000406:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14768549	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000406:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14768550	14768663	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000406:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14768664	14772394	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000406:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14772395	14772500	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000406:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14772501	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000406:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000406:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000406:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000406:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000406:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000406:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000406:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000406:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000406:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000406:27;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000406:27;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000406;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000406:28;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000407;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000407:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619614	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000407:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619615	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000407:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000407:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000407:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000407:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000407:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000407:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000407:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000407:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000407:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000407:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000407:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000407:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000407:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000407:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000407:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000407:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000407:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000407:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000407:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000407:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000407:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000407:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000407:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000407:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000407:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000407:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000407:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000407:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000407:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000407:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000407:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000407:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000407:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000407:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000407:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000407:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000407:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000407:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000407:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000407:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000407:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000407:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000407:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000407:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000407:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000407:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000407;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000407:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000408;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000408:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619614	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000408:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619615	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000408:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000408:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000408:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000408:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000408:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000408:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000408:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000408:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000408:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000408:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000408:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000408:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000408:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000408:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000408:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000408:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000408:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000408:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000408:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000408:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000408:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000408:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000408:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000408:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000408:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000408:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000408:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000408:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000408:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000408:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000408:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000408:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000408:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000408:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000408:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000408:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000408:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000408:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000408:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000408:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000408:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000408:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000408:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000408:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000408:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000408:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000408:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000408:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000408;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000408:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000409;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000409:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619629	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000409:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619630	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000409:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000409:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000409:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000409:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000409:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000409:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000409:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000409:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000409:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000409:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000409:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000409:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000409:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000409:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000409:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000409:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000409:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14704179	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000409:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14704180	14704417	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000409:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14704418	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000409:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000409:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000409:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000409:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000409:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000409:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000409:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000409:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000409:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000409:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000409:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000409:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000409:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000409:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000409:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000409:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000409:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000409:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000409:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000409:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000409:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000409:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000409:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000409:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000409:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000409:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000409:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000409;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000409:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000410;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000410:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619614	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000410:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619615	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000410:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000410:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000410:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000410:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000410:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000410:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000410:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000410:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000410:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000410:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000410:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000410:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000410:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000410:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000410:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000410:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000410:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000410:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000410:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14723402	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000410:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723403	14723450	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000410:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14723451	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000410:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000410:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000410:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000410:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000410:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000410:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000410:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000410:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000410:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000410:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000410:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000410:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000410:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000410:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000410:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000410:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000410:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000410:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000410:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000410:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000410:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000410:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000410:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000410:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000410:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000410:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000410:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000410:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000410:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000410;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000410:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000411;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000411:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619629	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000411:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619630	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000411:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000411:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000411:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000411:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000411:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000411:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000411:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000411:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000411:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000411:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000411:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000411:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000411:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14691718	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000411:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14691719	14691985	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000411:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14691986	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000411:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000411:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000411:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000411:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000411:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000411:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000411:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000411:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000411:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000411:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000411:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000411:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000411:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000411:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000411:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000411:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000411:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000411:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000411:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000411:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000411:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000411:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000411:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000411:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000411:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000411:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000411:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000411:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000411:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000411:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000411:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000411:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000411:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000411:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000411:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000411;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000411:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000412;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000412:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619629	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000412:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619630	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000412:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000412:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000412:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000412:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000412:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000412:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000412:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14668591	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000412:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14668592	14668683	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000412:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14668684	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000412:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000412:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000412:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000412:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000412:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000412:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000412:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000412:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000412:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000412:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000412:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000412:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000412:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000412:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000412:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000412:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000412:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000412:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000412:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000412:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000412:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000412:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000412:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000412:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000412:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000412:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000412:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000412:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000412:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000412:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000412:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000412:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000412:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000412:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000412:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000412:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000412:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000412:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000412:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000412:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000412:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000412;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000412:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000413;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000413:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619629	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000413:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619630	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000413:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000413:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000413:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000413:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000413:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000413:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000413:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14668615	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000413:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14668616	14668683	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000413:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14668684	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000413:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000413:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000413:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000413:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000413:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000413:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000413:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000413:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000413:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000413:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000413:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000413:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14704179	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000413:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14704180	14704952	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000413:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14704953	14723991	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000413:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723992	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000413:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000413:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000413:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000413:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000413:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000413:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000413:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000413:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000413:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000413:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000413:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000413:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000413:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000413:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000413:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000413:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000413:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000413:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000413:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000413:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000413:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14808298	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000413:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14808299	14808378	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000413:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14808379	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000413:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000413:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000413:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000413:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000413:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000413:27;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000413:27;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000413;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000413:28;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000414;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000414:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619629	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000414:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619630	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000414:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000414:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000414:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000414:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000414:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000414:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000414:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000414:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000414:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000414:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000414:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000414:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000414:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000414:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000414:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000414:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000414:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000414:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000414:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14723991	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000414:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723992	14724145	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000414:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724146	14724254	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000414:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724255	14724320	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000414:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724321	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000414:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000414:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000414:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000414:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14727080	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000414:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14727081	14727170	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000414:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14727171	14727704	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000414:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14727705	14727839	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000414:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14727840	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000414:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000414:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000414:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000414:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000414:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000414:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000414:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000414:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000414:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000414:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000414:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000414:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000414:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000414:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000414:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000414:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000414:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000414:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000414:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000414:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000414:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000414:27;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000414:27;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000414;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000414:28;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000415;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000415:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619629	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000415:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619630	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000415:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000415:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000415:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000415:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000415:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000415:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000415:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000415:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000415:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000415:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000415:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000415:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000415:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000415:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000415:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000415:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000415:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694959	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000415:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694960	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000415:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000415:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000415:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000415:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000415:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000415:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000415:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14727080	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000415:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14727081	14727236	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000415:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14727237	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000415:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000415:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000415:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000415:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000415:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000415:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000415:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000415:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000415:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000415:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000415:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000415:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000415:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000415:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000415:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000415:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000415:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000415:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000415:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000415:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000415:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000415;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000415:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000416;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000416:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000416:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000416:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000416:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000416:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000416:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000416:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000416:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000416:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000416:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000416:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000416:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000416:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000416:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000416:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000416:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000416:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000416:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000416:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14704179	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000416:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14704180	14704952	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000416:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14704953	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000416:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000416:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000416:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000416:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000416:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000416:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000416:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000416:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000416:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000416:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000416:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000416:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737877	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000416:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737878	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000416:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000416:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000416:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000416:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000416:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000416:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000416:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000416:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000416:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000416:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000416:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000416:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000416:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000416:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000416:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000416:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000416;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000416:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000417;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000417:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619629	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000417:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619630	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000417:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000417:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000417:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000417:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000417:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000417:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000417:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000417:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000417:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000417:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000417:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000417:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000417:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000417:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000417:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000417:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000417:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000417:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000417:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14723402	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000417:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723403	14723450	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000417:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14723451	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000417:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000417:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000417:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000417:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000417:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000417:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14727080	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000417:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14727081	14727170	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000417:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14727171	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000417:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000417:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000417:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000417:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000417:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000417:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000417:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000417:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000417:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000417:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000417:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000417:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000417:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000417:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000417:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000417:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000417:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000417:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000417:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000417:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000417:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000417:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000417:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000417;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000417:27;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000418;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000418:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619614	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000418:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619615	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000418:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000418:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000418:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000418:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000418:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000418:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000418:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000418:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000418:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000418:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000418:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000418:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000418:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000418:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000418:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000418:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000418:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000418:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000418:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14704179	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000418:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14704180	14704952	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000418:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14704953	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000418:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000418:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000418:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000418:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000418:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000418:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14727080	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000418:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14727081	14727138	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000418:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14727139	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000418:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000418:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000418:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000418:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000418:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000418:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000418:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000418:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000418:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000418:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000418:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000418:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000418:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000418:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000418:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000418:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000418:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000418:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000418:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000418:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000418:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000418:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000418:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000418;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000418:27;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000419;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000419:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000419:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000419:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000419:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000419:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000419:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000419:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000419:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000419:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000419:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000419:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000419:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000419:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000419:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000419:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000419:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000419:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000419:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000419:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14704179	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000419:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14704180	14704952	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000419:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14704953	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000419:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000419:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000419:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000419:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000419:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000419:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000419:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000419:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000419:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000419:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000419:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000419:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737877	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000419:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737878	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000419:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000419:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000419:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14772394	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000419:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14772395	14772500	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000419:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14772501	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000419:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000419:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000419:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000419:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000419:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000419:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000419:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000419:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000419:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000419:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000419:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000419;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000419:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000420;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000420:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619629	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000420:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619630	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000420:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000420:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000420:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000420:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000420:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000420:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000420:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000420:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000420:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000420:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000420:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000420:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000420:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000420:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000420:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000420:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000420:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000420:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000420:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000420:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000420:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000420:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000420:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000420:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000420:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000420:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000420:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000420:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000420:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000420:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000420:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000420:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000420:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000420:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000420:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000420:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000420:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000420:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000420:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000420:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000420:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000420:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000420:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000420:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000420:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000420:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000420;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000420:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000421;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000421:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619629	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000421:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619630	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000421:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000421:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000421:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000421:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000421:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000421:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000421:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000421:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000421:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000421:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000421:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000421:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000421:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000421:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000421:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000421:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000421:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694959	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000421:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694960	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000421:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000421:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000421:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000421:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000421:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000421:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000421:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000421:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000421:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000421:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000421:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000421:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000421:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000421:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000421:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000421:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000421:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000421:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000421:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14772394	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000421:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14772395	14772500	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000421:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14772501	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000421:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000421:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000421:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000421:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000421:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000421:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000421:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000421:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000421:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000421:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000421:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000421;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000421:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000422;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000422:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619629	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000422:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619630	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000422:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000422:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000422:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000422:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000422:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000422:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000422:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000422:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000422:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000422:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000422:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674267	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000422:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674268	14674335	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000422:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674336	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000422:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000422:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000422:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000422:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000422:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000422:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000422:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000422:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14704179	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000422:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14704180	14704952	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000422:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14704953	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000422:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000422:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000422:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000422:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000422:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000422:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000422:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000422:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000422:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000422:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000422:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000422:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000422:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000422:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000422:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000422:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000422:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000422:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000422:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000422:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000422:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000422:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000422:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000422:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000422:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000422:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000422:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000422:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000422:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000422;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000422:27;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000423;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000423:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619629	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000423:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619630	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000423:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000423:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000423:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14646855	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000423:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14646856	14646960	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000423:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14646961	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000423:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000423:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000423:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000423:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000423:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000423:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000423:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000423:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000423:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000423:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000423:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000423:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000423:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000423:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000423:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000423:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14704179	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000423:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14704180	14704952	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000423:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14704953	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000423:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000423:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000423:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000423:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000423:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000423:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000423:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000423:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000423:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000423:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000423:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000423:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000423:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000423:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000423:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000423:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000423:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000423:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000423:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000423:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000423:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000423:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000423:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000423:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000423:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000423:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000423:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000423:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000423:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000423;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000423:27;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000424;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000424:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619629	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000424:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619630	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000424:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000424:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000424:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000424:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000424:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000424:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000424:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000424:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000424:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000424:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000424:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000424:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000424:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000424:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000424:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000424:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000424:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000424:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000424:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14704179	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000424:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14704180	14704417	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000424:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14704418	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000424:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000424:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000424:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000424:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000424:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000424:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14727704	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000424:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14727705	14727839	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000424:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14727840	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000424:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000424:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000424:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000424:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000424:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000424:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000424:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000424:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000424:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000424:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000424:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000424:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000424:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000424:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000424:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000424:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000424:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000424:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000424:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000424:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000424:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000424:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000424:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000424;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000424:27;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000425;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000425:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619629	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000425:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619630	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000425:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000425:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000425:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000425:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000425:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000425:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000425:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000425:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000425:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000425:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000425:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000425:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000425:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000425:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000425:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000425:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000425:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000425:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000425:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14704179	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000425:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14704180	14704952	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000425:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14704953	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000425:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000425:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000425:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000425:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000425:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000425:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14727080	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000425:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14727081	14727138	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000425:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14727139	14727704	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000425:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14727705	14727839	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000425:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14727840	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000425:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000425:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000425:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000425:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000425:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000425:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000425:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000425:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000425:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000425:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000425:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000425:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000425:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000425:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000425:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000425:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000425:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000425:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000425:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000425:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000425:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000425:27;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000425:27;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000425;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000425:28;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000426;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000426:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619629	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000426:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619630	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000426:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000426:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000426:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000426:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000426:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000426:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000426:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000426:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000426:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000426:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000426:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000426:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000426:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000426:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000426:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000426:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000426:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000426:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000426:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14704179	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000426:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14704180	14704952	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000426:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14704953	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000426:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000426:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000426:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000426:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000426:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000426:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14727704	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000426:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14727705	14727839	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000426:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14727840	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000426:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000426:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000426:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000426:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000426:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000426:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000426:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000426:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000426:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000426:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14772394	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000426:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14772395	14772500	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000426:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14772501	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000426:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000426:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000426:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000426:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000426:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000426:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000426:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000426:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000426:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000426:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000426:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000426;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000426:27;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000427;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000427:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619629	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000427:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619630	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000427:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000427:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000427:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000427:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000427:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000427:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000427:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000427:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000427:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000427:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000427:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000427:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000427:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000427:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000427:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000427:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000427:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000427:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000427:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14704179	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000427:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14704180	14704952	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000427:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14704953	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000427:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000427:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000427:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000427:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000427:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000427:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000427:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000427:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000427:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000427:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000427:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000427:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000427:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000427:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000427:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000427:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000427:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000427:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000427:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000427:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000427:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000427:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000427:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000427:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000427:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000427:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000427:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000427;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000427:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14616992	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000428;Name=UTY
NA19239_chrY	CAT	exon	14616992	14618495	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000428:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14618496	14619629	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000428:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14619630	14619800	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000428:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14619801	14628890	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000428:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14628891	14629017	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000428:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14629018	14666321	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000428:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14666322	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000428:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000428:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000428:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000428:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000428:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000428:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000428:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000428:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000428:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000428:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000428:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000428:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000428:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000428:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000428:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14704179	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000428:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14704180	14704952	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000428:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14704953	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000428:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000428:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000428:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000428:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000428:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000428:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000428:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728560	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000428:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728561	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000428:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000428:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000428:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000428:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000428:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000428:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000428:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000428:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000428:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000428:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000428:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000428:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000428:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000428:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000428:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000428:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000428:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000428:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000428:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000428:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000428:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000428;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000428:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14666124	14848664	1000	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000429;Name=UTY
NA19239_chrY	CAT	exon	14666124	14666463	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000429:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14666464	14667571	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000429:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14667572	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000429:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14668591	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000429:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14668592	14668683	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000429:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14668684	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000429:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000429:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000429:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000429:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000429:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000429:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000429:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000429:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000429:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000429:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000429:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000429:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14704179	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000429:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14704180	14704952	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000429:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14704953	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000429:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000429:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000429:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000429:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000429:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000429:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000429:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000429:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000429:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000429:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000429:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000429:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000429:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000429:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000429:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000429:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000429:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000429:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000429:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000429:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000429:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000429:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000429:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000429:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000429:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000429:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000429:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000429:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000429:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14848664	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000429;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000429:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14667705	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000430;Name=UTY
NA19239_chrY	CAT	exon	14667705	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000430:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14668591	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000430:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14668592	14668683	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000430:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14668684	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000430:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000430:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000430:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000430:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000430:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000430:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000430:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000430:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000430:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000430:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000430:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000430:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14704179	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000430:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14704180	14704952	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000430:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14704953	14723402	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000430:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723403	14723450	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000430:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14723451	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000430:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000430:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000430:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000430:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000430:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000430:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14727080	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000430:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14727081	14727236	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000430:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14727237	14727704	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000430:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14727705	14727839	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000430:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14727840	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000430:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000430:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000430:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000430:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000430:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000430:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000430:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000430:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000430:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000430:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000430:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000430:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000430:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000430:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000430:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000430:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000430:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000430:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000430:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000430:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000430:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000430:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000430:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000430;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000430:26;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14667741	14849301	1000	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_G0000150;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19239_ch_T0000431;Name=UTY
NA19239_chrY	CAT	exon	14667741	14667759	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000431:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14667760	14668591	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000431:0;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14668592	14668683	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000431:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14668684	14671491	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000431:1;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14671492	14671606	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000431:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14671607	14674013	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000431:2;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674014	14674162	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000431:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674163	14674652	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000431:3;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14674653	14674865	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000431:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14674866	14692171	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000431:4;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14692172	14692377	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000431:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14692378	14693217	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000431:5;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14693218	14693323	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000431:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14693324	14694837	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000431:6;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14694838	14694967	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000431:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14694968	14704179	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000431:7;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14704180	14704952	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000431:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14704953	14723619	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000431:8;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14723620	14724015	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000431:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724016	14724539	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000431:9;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14724540	14724635	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000431:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14724636	14726493	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000431:10;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14726494	14726586	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000431:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14726587	14727080	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000431:11;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14727081	14727236	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000431:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14727237	14727704	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000431:12;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14727705	14727839	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000431:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14727840	14728383	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000431:13;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14728384	14728603	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000431:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14728604	14729046	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000431:14;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14729047	14729145	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000431:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14729146	14734883	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000431:15;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14734884	14735010	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000431:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14735011	14737872	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000431:16;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14737873	14737966	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000431:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14737967	14762468	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000431:17;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14762469	14762503	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000431:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14762504	14765529	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000431:18;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14765530	14765584	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000431:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14765585	14779604	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000431:19;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14779605	14779725	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000431:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14779726	14783346	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000431:20;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14783347	14783405	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000431:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14783406	14817648	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000431:21;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14817649	14817698	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000431:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14817699	14838751	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000431:22;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14838752	14838860	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000431:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14838861	14847884	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000431:23;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14847885	14847948	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000431:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	14847949	14848144	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19239_ch_T0000431:24;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	14848145	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000431;gene_id=NA19239_ch_G0000150;Parent=NA19239_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19239_ch_T0000431:25;Name=UTY;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	14847808	14847845	.	+	.	source_gene_common_name=MIR12120;source_gene=hg002_chrY_paternal_323;alternative_source_transcripts=hg002_chrY_paternal_323.1,hg002_chrY_paternal_323.1;gene_id=NA19239_ch_G0000151;gene_biotype=miRNA;gene_name=MIR12120;gene_sources=liftoff;ID=NA19239_ch_G0000151;Name=MIR12120
NA19239_chrY	CAT	transcript	14847808	14847897	1000	+	.	source_transcript=hg002_chrY_paternal_323.1;source_transcript_name=hg002_chrY_paternal_323.1;source_gene=hg002_chrY_paternal_323;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_323;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_323.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_323.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR12120;alternative_source_transcripts=hg002_chrY_paternal_323.1,hg002_chrY_paternal_323.1;transcript_id=NA19239_ch_T0000432;gene_id=NA19239_ch_G0000151;Parent=NA19239_ch_G0000151;transcript_name=hg002_chrY_paternal_323.1;gene_name=MIR12120;ID=NA19239_ch_T0000432;Name=MIR12120
NA19239_chrY	CAT	exon	14847808	14847897	.	+	.	source_transcript=hg002_chrY_paternal_323.1;source_transcript_name=hg002_chrY_paternal_323.1;source_gene=hg002_chrY_paternal_323;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_323;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_323.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR12120;alternative_source_transcripts=hg002_chrY_paternal_323.1,hg002_chrY_paternal_323.1;transcript_id=NA19239_ch_T0000432;gene_id=NA19239_ch_G0000151;Parent=NA19239_ch_T0000432;transcript_name=hg002_chrY_paternal_323.1;gene_name=MIR12120;ID=exon:NA19239_ch_T0000432:0;Name=MIR12120;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	14847820	14847845	1000	+	.	source_transcript=hg002_chrY_paternal_323.2;source_transcript_name=hg002_chrY_paternal_323.1;source_gene=hg002_chrY_paternal_323;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_323;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_323.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_323.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR12120;alternative_source_transcripts=hg002_chrY_paternal_323.2,hg002_chrY_paternal_323.2;transcript_id=NA19239_ch_T0000433;gene_id=NA19239_ch_G0000151;Parent=NA19239_ch_G0000151;transcript_name=hg002_chrY_paternal_323.1;gene_name=MIR12120;ID=NA19239_ch_T0000433;Name=MIR12120
NA19239_chrY	CAT	exon	14847820	14847845	.	+	.	source_transcript=hg002_chrY_paternal_323.2;source_transcript_name=hg002_chrY_paternal_323.1;source_gene=hg002_chrY_paternal_323;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_323;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_323.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_323.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR12120;alternative_source_transcripts=hg002_chrY_paternal_323.2,hg002_chrY_paternal_323.2;transcript_id=NA19239_ch_T0000433;gene_id=NA19239_ch_G0000151;Parent=NA19239_ch_T0000433;transcript_name=hg002_chrY_paternal_323.1;gene_name=MIR12120;ID=exon:NA19239_ch_T0000433:0;Name=MIR12120;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	15072450	15074575	.	+	.	source_gene_common_name=TMSB4Y;source_gene=hg002_chrY_paternal_324;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;gene_id=NA19239_ch_G0000152;gene_biotype=protein_coding;gene_name=TMSB4Y;gene_sources=liftoff;ID=NA19239_ch_G0000152;Name=TMSB4Y
NA19239_chrY	CAT	transcript	15072450	15074575	100	+	.	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=NA19239_ch_T0000434;gene_id=NA19239_ch_G0000152;Parent=NA19239_ch_G0000152;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=NA19239_ch_T0000434;Name=TMSB4Y
NA19239_chrY	CAT	exon	15072450	15072986	.	+	.	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=NA19239_ch_T0000434;gene_id=NA19239_ch_G0000152;Parent=NA19239_ch_T0000434;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=exon:NA19239_ch_T0000434:0;Name=TMSB4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	15072887	15072986	.	+	0	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=NA19239_ch_T0000434;gene_id=NA19239_ch_G0000152;Parent=NA19239_ch_T0000434;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=CDS:NA19239_ch_T0000434:0;Name=TMSB4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	15072887	15072889	.	+	0	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=NA19239_ch_T0000434;gene_id=NA19239_ch_G0000152;Parent=NA19239_ch_T0000434;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=start_codon:NA19239_ch_T0000434;Name=TMSB4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	15072987	15073775	.	+	.	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=NA19239_ch_T0000434;gene_id=NA19239_ch_G0000152;Parent=NA19239_ch_T0000434;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=intron:NA19239_ch_T0000434:0;Name=TMSB4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	15073776	15074575	.	+	.	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=NA19239_ch_T0000434;gene_id=NA19239_ch_G0000152;Parent=NA19239_ch_T0000434;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=exon:NA19239_ch_T0000434:1;Name=TMSB4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	15073776	15073810	.	+	2	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=NA19239_ch_T0000434;gene_id=NA19239_ch_G0000152;Parent=NA19239_ch_T0000434;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=CDS:NA19239_ch_T0000434:1;Name=TMSB4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	15073808	15073810	.	+	0	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=NA19239_ch_T0000434;gene_id=NA19239_ch_G0000152;Parent=NA19239_ch_T0000434;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=stop_codon:NA19239_ch_T0000434;Name=TMSB4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	15354372	15355073	.	-	.	source_gene_common_name=VCY;source_gene=hg002_chrY_paternal_327;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;gene_id=NA19239_ch_G0000153;gene_biotype=protein_coding;gene_name=VCY;gene_sources=liftoff,augTM;ID=NA19239_ch_G0000153;Name=VCY
NA19239_chrY	CAT	transcript	15354372	15355073	100	-	.	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000435;gene_id=NA19239_ch_G0000153;Parent=NA19239_ch_G0000153;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=NA19239_ch_T0000435;Name=VCY
NA19239_chrY	CAT	exon	15354372	15354746	.	-	.	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000435;gene_id=NA19239_ch_G0000153;Parent=NA19239_ch_T0000435;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=exon:NA19239_ch_T0000435:0;Name=VCY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	15354471	15354746	.	-	0	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000435;gene_id=NA19239_ch_G0000153;Parent=NA19239_ch_T0000435;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=CDS:NA19239_ch_T0000435:0;Name=VCY;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	15354471	15354473	.	-	0	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000435;gene_id=NA19239_ch_G0000153;Parent=NA19239_ch_T0000435;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=stop_codon:NA19239_ch_T0000435;Name=VCY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	15354747	15354938	.	-	.	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000435;gene_id=NA19239_ch_G0000153;Parent=NA19239_ch_T0000435;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=intron:NA19239_ch_T0000435:0;Name=VCY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	15354939	15355073	.	-	.	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000435;gene_id=NA19239_ch_G0000153;Parent=NA19239_ch_T0000435;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=exon:NA19239_ch_T0000435:1;Name=VCY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	15354939	15355040	.	-	0	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000435;gene_id=NA19239_ch_G0000153;Parent=NA19239_ch_T0000435;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=CDS:NA19239_ch_T0000435:1;Name=VCY;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	15355038	15355040	.	-	0	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000435;gene_id=NA19239_ch_G0000153;Parent=NA19239_ch_T0000435;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=start_codon:NA19239_ch_T0000435;Name=VCY;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	15424845	15425576	.	+	.	source_gene_common_name=VCY1B;source_gene=hg002_chrY_paternal_328;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;gene_id=NA19239_ch_G0000154;gene_biotype=protein_coding;gene_name=VCY1B;gene_sources=liftoff,augTM;ID=NA19239_ch_G0000154;Name=VCY1B
NA19239_chrY	CAT	transcript	15424845	15425576	100	+	.	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000436;gene_id=NA19239_ch_G0000154;Parent=NA19239_ch_G0000154;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=NA19239_ch_T0000436;Name=VCY1B
NA19239_chrY	CAT	exon	15424845	15425009	.	+	.	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000436;gene_id=NA19239_ch_G0000154;Parent=NA19239_ch_T0000436;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=exon:NA19239_ch_T0000436:0;Name=VCY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	15424908	15425009	.	+	0	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000436;gene_id=NA19239_ch_G0000154;Parent=NA19239_ch_T0000436;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=CDS:NA19239_ch_T0000436:0;Name=VCY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	15424908	15424910	.	+	0	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000436;gene_id=NA19239_ch_G0000154;Parent=NA19239_ch_T0000436;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=start_codon:NA19239_ch_T0000436;Name=VCY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	15425010	15425201	.	+	.	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000436;gene_id=NA19239_ch_G0000154;Parent=NA19239_ch_T0000436;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=intron:NA19239_ch_T0000436:0;Name=VCY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	15425202	15425576	.	+	.	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000436;gene_id=NA19239_ch_G0000154;Parent=NA19239_ch_T0000436;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=exon:NA19239_ch_T0000436:1;Name=VCY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	15425202	15425477	.	+	0	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000436;gene_id=NA19239_ch_G0000154;Parent=NA19239_ch_T0000436;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=CDS:NA19239_ch_T0000436:1;Name=VCY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	15425475	15425477	.	+	0	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000436;gene_id=NA19239_ch_G0000154;Parent=NA19239_ch_T0000436;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=stop_codon:NA19239_ch_T0000436;Name=VCY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	15891193	16102140	.	+	.	source_gene_common_name=NLGN4Y;source_gene=hg002_chrY_paternal_331;alternative_source_transcripts=hg002_chrY_paternal_331.1;gene_id=NA19239_ch_G0000155;gene_biotype=protein_coding;gene_name=NLGN4Y;gene_sources=liftoff,transMap;ID=NA19239_ch_G0000155;Name=NLGN4Y
NA19239_chrY	CAT	transcript	15891193	16102140	10000	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=300.0;frameshift=True;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000437;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_G0000155;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=NA19239_ch_T0000437;Name=NLGN4Y
NA19239_chrY	CAT	exon	15891193	15891518	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000437;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000437;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19239_ch_T0000437:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	15891519	15990597	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000437;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000437;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19239_ch_T0000437:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	15990598	15991180	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000437;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000437;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19239_ch_T0000437:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	15990709	15991180	.	+	0	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000437;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000437;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19239_ch_T0000437:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	15990709	15990711	.	+	0	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000437;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000437;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:NA19239_ch_T0000437;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	15991181	16088045	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000437;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000437;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19239_ch_T0000437:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	16088046	16088105	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000437;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000437;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19239_ch_T0000437:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	16088046	16088105	.	+	2	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000437;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000437;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19239_ch_T0000437:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	16088106	16091702	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000437;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000437;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19239_ch_T0000437:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	16091703	16091855	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000437;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000437;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19239_ch_T0000437:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	16091703	16091855	.	+	2	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000437;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000437;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19239_ch_T0000437:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	16091856	16102041	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000437;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000437;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19239_ch_T0000437:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	16102042	16102117	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000437;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000437;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19239_ch_T0000437:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	16102042	16102117	.	+	2	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000437;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000437;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19239_ch_T0000437:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	16102118	16102118	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000437;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000437;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19239_ch_T0000437:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	16102119	16102140	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000437;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000437;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19239_ch_T0000437:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	16102119	16102128	.	+	1	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000437;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000437;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19239_ch_T0000437:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	16102126	16102128	.	+	0	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000437;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000437;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:NA19239_ch_T0000437;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	15893106	16102140	10000	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=300.0;frameshift=True;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000438;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_G0000155;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=NA19239_ch_T0000438;Name=NLGN4Y
NA19239_chrY	CAT	exon	15893106	15893513	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000438;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19239_ch_T0000438:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	15893514	15990597	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000438;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19239_ch_T0000438:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	15990598	15991180	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000438;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19239_ch_T0000438:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	15990709	15991180	.	+	0	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000438;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19239_ch_T0000438:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	15990709	15990711	.	+	0	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000438;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:NA19239_ch_T0000438;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	15991181	16088045	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000438;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19239_ch_T0000438:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	16088046	16088105	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000438;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19239_ch_T0000438:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	16088046	16088105	.	+	2	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000438;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19239_ch_T0000438:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	16088106	16091702	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000438;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19239_ch_T0000438:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	16091703	16091855	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000438;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19239_ch_T0000438:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	16091703	16091855	.	+	2	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000438;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19239_ch_T0000438:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	16091856	16102041	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000438;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19239_ch_T0000438:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	16102042	16102117	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000438;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19239_ch_T0000438:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	16102042	16102117	.	+	2	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000438;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19239_ch_T0000438:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	16102118	16102118	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000438;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19239_ch_T0000438:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	16102119	16102140	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000438;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19239_ch_T0000438:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	16102119	16102128	.	+	1	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000438;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19239_ch_T0000438:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	16102126	16102128	.	+	0	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000438;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:NA19239_ch_T0000438;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	15893106	16102140	10000	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=300.0;frameshift=True;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000439;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_G0000155;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=NA19239_ch_T0000439;Name=NLGN4Y
NA19239_chrY	CAT	exon	15893106	15893285	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000439;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000439;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19239_ch_T0000439:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	15893286	15990597	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000439;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000439;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19239_ch_T0000439:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	15990598	15991180	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000439;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000439;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19239_ch_T0000439:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	15990709	15991180	.	+	0	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000439;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000439;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19239_ch_T0000439:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	15990709	15990711	.	+	0	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000439;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000439;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:NA19239_ch_T0000439;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	15991181	16088045	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000439;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000439;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19239_ch_T0000439:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	16088046	16088105	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000439;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000439;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19239_ch_T0000439:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	16088046	16088105	.	+	2	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000439;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000439;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19239_ch_T0000439:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	16088106	16091702	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000439;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000439;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19239_ch_T0000439:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	16091703	16091855	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000439;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000439;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19239_ch_T0000439:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	16091703	16091855	.	+	2	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000439;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000439;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19239_ch_T0000439:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	16091856	16102041	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000439;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000439;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19239_ch_T0000439:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	16102042	16102117	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000439;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000439;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19239_ch_T0000439:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	16102042	16102117	.	+	2	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000439;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000439;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19239_ch_T0000439:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	16102118	16102118	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000439;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000439;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19239_ch_T0000439:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	16102119	16102140	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000439;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000439;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19239_ch_T0000439:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	16102119	16102128	.	+	1	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000439;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000439;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19239_ch_T0000439:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	16102126	16102128	.	+	0	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000439;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000439;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:NA19239_ch_T0000439;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	15990610	16102140	10000	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=300.0;frameshift=True;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000440;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_G0000155;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=NA19239_ch_T0000440;Name=NLGN4Y
NA19239_chrY	CAT	exon	15990610	15991180	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000440;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000440;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19239_ch_T0000440:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	15990709	15991180	.	+	0	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000440;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000440;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19239_ch_T0000440:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	15990709	15990711	.	+	0	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000440;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000440;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:NA19239_ch_T0000440;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	15991181	16088045	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000440;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000440;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19239_ch_T0000440:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	16088046	16088105	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000440;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000440;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19239_ch_T0000440:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	16088046	16088105	.	+	2	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000440;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000440;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19239_ch_T0000440:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	16088106	16091702	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000440;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000440;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19239_ch_T0000440:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	16091703	16091855	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000440;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000440;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19239_ch_T0000440:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	16091703	16091855	.	+	2	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000440;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000440;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19239_ch_T0000440:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	16091856	16102041	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000440;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000440;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19239_ch_T0000440:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	16102042	16102117	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000440;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000440;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19239_ch_T0000440:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	16102042	16102117	.	+	2	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000440;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000440;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19239_ch_T0000440:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	16102118	16102118	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000440;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000440;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19239_ch_T0000440:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	16102119	16102140	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000440;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000440;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19239_ch_T0000440:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	16102119	16102128	.	+	1	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000440;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000440;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19239_ch_T0000440:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	16102126	16102128	.	+	0	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000440;gene_id=NA19239_ch_G0000155;Parent=NA19239_ch_T0000440;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:NA19239_ch_T0000440;Name=NLGN4Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	16162218	16172565	.	-	.	source_gene_common_name=NLGN4Y-AS1;source_gene=hg002_chrY_paternal_333;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;gene_id=NA19239_ch_G0000156;gene_biotype=lncRNA;gene_name=NLGN4Y-AS1;gene_sources=liftoff;ID=NA19239_ch_G0000156;Name=NLGN4Y-AS1
NA19239_chrY	CAT	transcript	16162218	16172565	1000	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=NA19239_ch_T0000441;gene_id=NA19239_ch_G0000156;Parent=NA19239_ch_G0000156;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=NA19239_ch_T0000441;Name=NLGN4Y-AS1
NA19239_chrY	CAT	exon	16162218	16162563	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=NA19239_ch_T0000441;gene_id=NA19239_ch_G0000156;Parent=NA19239_ch_T0000441;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=exon:NA19239_ch_T0000441:0;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	16162564	16167197	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=NA19239_ch_T0000441;gene_id=NA19239_ch_G0000156;Parent=NA19239_ch_T0000441;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=intron:NA19239_ch_T0000441:0;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	16167198	16167285	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=NA19239_ch_T0000441;gene_id=NA19239_ch_G0000156;Parent=NA19239_ch_T0000441;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=exon:NA19239_ch_T0000441:1;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	16167286	16169851	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=NA19239_ch_T0000441;gene_id=NA19239_ch_G0000156;Parent=NA19239_ch_T0000441;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=intron:NA19239_ch_T0000441:1;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	16169852	16169920	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=NA19239_ch_T0000441;gene_id=NA19239_ch_G0000156;Parent=NA19239_ch_T0000441;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=exon:NA19239_ch_T0000441:2;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	16169921	16172536	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=NA19239_ch_T0000441;gene_id=NA19239_ch_G0000156;Parent=NA19239_ch_T0000441;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=intron:NA19239_ch_T0000441:2;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	16172537	16172565	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=NA19239_ch_T0000441;gene_id=NA19239_ch_G0000156;Parent=NA19239_ch_T0000441;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=exon:NA19239_ch_T0000441:3;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	16615589	16733589	.	-	.	source_gene_common_name=LOC107987355;source_gene=hg002_chrY_paternal_336;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;gene_id=NA19239_ch_G0000157;gene_biotype=lncRNA;gene_name=LOC107987355;gene_sources=liftoff;ID=NA19239_ch_G0000157;Name=LOC107987355
NA19239_chrY	CAT	transcript	16615589	16733589	1000	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=NA19239_ch_T0000442;gene_id=NA19239_ch_G0000157;Parent=NA19239_ch_G0000157;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=NA19239_ch_T0000442;Name=LOC107987355
NA19239_chrY	CAT	exon	16615589	16615661	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=NA19239_ch_T0000442;gene_id=NA19239_ch_G0000157;Parent=NA19239_ch_T0000442;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=exon:NA19239_ch_T0000442:0;Name=LOC107987355;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	16615662	16717116	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=NA19239_ch_T0000442;gene_id=NA19239_ch_G0000157;Parent=NA19239_ch_T0000442;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=intron:NA19239_ch_T0000442:0;Name=LOC107987355;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	16717117	16717339	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=NA19239_ch_T0000442;gene_id=NA19239_ch_G0000157;Parent=NA19239_ch_T0000442;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=exon:NA19239_ch_T0000442:1;Name=LOC107987355;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	16717340	16733503	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=NA19239_ch_T0000442;gene_id=NA19239_ch_G0000157;Parent=NA19239_ch_T0000442;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=intron:NA19239_ch_T0000442:1;Name=LOC107987355;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	16733504	16733589	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=NA19239_ch_T0000442;gene_id=NA19239_ch_G0000157;Parent=NA19239_ch_T0000442;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=exon:NA19239_ch_T0000442:2;Name=LOC107987355;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	17506892	17507023	.	-	.	source_gene_common_name=LOC124900508;source_gene=hg002_chrY_paternal_339;alternative_source_transcripts=hg002_chrY_paternal_339.1,hg002_chrY_paternal_339.1;gene_id=NA19239_ch_G0000158;gene_biotype=snoRNA;gene_name=LOC124900508;gene_sources=liftoff;ID=NA19239_ch_G0000158;Name=LOC124900508
NA19239_chrY	CAT	transcript	17506892	17507023	1000	-	.	source_transcript=hg002_chrY_paternal_339.1;source_transcript_name=hg002_chrY_paternal_339.1;source_gene=hg002_chrY_paternal_339;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_339;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_339.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_339.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900508;alternative_source_transcripts=hg002_chrY_paternal_339.1,hg002_chrY_paternal_339.1;transcript_id=NA19239_ch_T0000443;gene_id=NA19239_ch_G0000158;Parent=NA19239_ch_G0000158;transcript_name=hg002_chrY_paternal_339.1;gene_name=LOC124900508;ID=NA19239_ch_T0000443;Name=LOC124900508
NA19239_chrY	CAT	exon	17506892	17507023	.	-	.	source_transcript=hg002_chrY_paternal_339.1;source_transcript_name=hg002_chrY_paternal_339.1;source_gene=hg002_chrY_paternal_339;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_339;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_339.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900508;alternative_source_transcripts=hg002_chrY_paternal_339.1,hg002_chrY_paternal_339.1;transcript_id=NA19239_ch_T0000443;gene_id=NA19239_ch_G0000158;Parent=NA19239_ch_T0000443;transcript_name=hg002_chrY_paternal_339.1;gene_name=LOC124900508;ID=exon:NA19239_ch_T0000443:0;Name=LOC124900508;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	18869480	18885260	.	+	.	source_gene_common_name=FAM41AY2;source_gene=hg002_chrY_paternal_344;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;gene_id=NA19239_ch_G0000159;gene_biotype=lncRNA;gene_name=FAM41AY2;gene_sources=liftoff;ID=NA19239_ch_G0000159;Name=FAM41AY2
NA19239_chrY	CAT	transcript	18869480	18885260	1000	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19239_ch_T0000444;gene_id=NA19239_ch_G0000159;Parent=NA19239_ch_G0000159;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=NA19239_ch_T0000444;Name=FAM41AY2
NA19239_chrY	CAT	exon	18869480	18869637	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19239_ch_T0000444;gene_id=NA19239_ch_G0000159;Parent=NA19239_ch_T0000444;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:NA19239_ch_T0000444:0;Name=FAM41AY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	18869638	18870232	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19239_ch_T0000444;gene_id=NA19239_ch_G0000159;Parent=NA19239_ch_T0000444;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:NA19239_ch_T0000444:0;Name=FAM41AY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	18870233	18870282	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19239_ch_T0000444;gene_id=NA19239_ch_G0000159;Parent=NA19239_ch_T0000444;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:NA19239_ch_T0000444:1;Name=FAM41AY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	18870283	18881615	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19239_ch_T0000444;gene_id=NA19239_ch_G0000159;Parent=NA19239_ch_T0000444;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:NA19239_ch_T0000444:1;Name=FAM41AY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	18881616	18881744	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19239_ch_T0000444;gene_id=NA19239_ch_G0000159;Parent=NA19239_ch_T0000444;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:NA19239_ch_T0000444:2;Name=FAM41AY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	18881745	18881991	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19239_ch_T0000444;gene_id=NA19239_ch_G0000159;Parent=NA19239_ch_T0000444;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:NA19239_ch_T0000444:2;Name=FAM41AY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	18881992	18882085	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19239_ch_T0000444;gene_id=NA19239_ch_G0000159;Parent=NA19239_ch_T0000444;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:NA19239_ch_T0000444:3;Name=FAM41AY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	18882086	18882678	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19239_ch_T0000444;gene_id=NA19239_ch_G0000159;Parent=NA19239_ch_T0000444;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:NA19239_ch_T0000444:3;Name=FAM41AY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	18882679	18882849	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19239_ch_T0000444;gene_id=NA19239_ch_G0000159;Parent=NA19239_ch_T0000444;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:NA19239_ch_T0000444:4;Name=FAM41AY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	18882850	18882958	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19239_ch_T0000444;gene_id=NA19239_ch_G0000159;Parent=NA19239_ch_T0000444;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:NA19239_ch_T0000444:4;Name=FAM41AY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	18882959	18883052	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19239_ch_T0000444;gene_id=NA19239_ch_G0000159;Parent=NA19239_ch_T0000444;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:NA19239_ch_T0000444:5;Name=FAM41AY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	18883053	18883326	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19239_ch_T0000444;gene_id=NA19239_ch_G0000159;Parent=NA19239_ch_T0000444;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:NA19239_ch_T0000444:5;Name=FAM41AY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	18883327	18883536	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19239_ch_T0000444;gene_id=NA19239_ch_G0000159;Parent=NA19239_ch_T0000444;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:NA19239_ch_T0000444:6;Name=FAM41AY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	18883537	18883829	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19239_ch_T0000444;gene_id=NA19239_ch_G0000159;Parent=NA19239_ch_T0000444;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:NA19239_ch_T0000444:6;Name=FAM41AY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	18883830	18884017	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19239_ch_T0000444;gene_id=NA19239_ch_G0000159;Parent=NA19239_ch_T0000444;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:NA19239_ch_T0000444:7;Name=FAM41AY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	18884018	18884229	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19239_ch_T0000444;gene_id=NA19239_ch_G0000159;Parent=NA19239_ch_T0000444;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:NA19239_ch_T0000444:7;Name=FAM41AY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	18884230	18884451	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19239_ch_T0000444;gene_id=NA19239_ch_G0000159;Parent=NA19239_ch_T0000444;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:NA19239_ch_T0000444:8;Name=FAM41AY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	18884452	18884533	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19239_ch_T0000444;gene_id=NA19239_ch_G0000159;Parent=NA19239_ch_T0000444;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:NA19239_ch_T0000444:8;Name=FAM41AY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	18884534	18885260	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19239_ch_T0000444;gene_id=NA19239_ch_G0000159;Parent=NA19239_ch_T0000444;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:NA19239_ch_T0000444:9;Name=FAM41AY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	18922664	18931921	.	-	.	source_gene_common_name=LOC105377217;source_gene=hg002_chrY_paternal_346;alternative_source_transcripts=hg002_chrY_paternal_346.1,hg002_chrY_paternal_346.1;gene_id=NA19239_ch_G0000160;gene_biotype=lncRNA;gene_name=LOC105377217;gene_sources=liftoff;ID=NA19239_ch_G0000160;Name=LOC105377217
NA19239_chrY	CAT	transcript	18922664	18931921	1000	-	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;alternative_source_transcripts=hg002_chrY_paternal_346.1,hg002_chrY_paternal_346.1;transcript_id=NA19239_ch_T0000445;gene_id=NA19239_ch_G0000160;Parent=NA19239_ch_G0000160;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=NA19239_ch_T0000445;Name=LOC105377217
NA19239_chrY	CAT	exon	18922664	18924530	.	-	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;alternative_source_transcripts=hg002_chrY_paternal_346.1,hg002_chrY_paternal_346.1;transcript_id=NA19239_ch_T0000445;gene_id=NA19239_ch_G0000160;Parent=NA19239_ch_T0000445;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=exon:NA19239_ch_T0000445:0;Name=LOC105377217;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	18924531	18925240	.	-	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;alternative_source_transcripts=hg002_chrY_paternal_346.1,hg002_chrY_paternal_346.1;transcript_id=NA19239_ch_T0000445;gene_id=NA19239_ch_G0000160;Parent=NA19239_ch_T0000445;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=intron:NA19239_ch_T0000445:0;Name=LOC105377217;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	18925241	18925369	.	-	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;alternative_source_transcripts=hg002_chrY_paternal_346.1,hg002_chrY_paternal_346.1;transcript_id=NA19239_ch_T0000445;gene_id=NA19239_ch_G0000160;Parent=NA19239_ch_T0000445;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=exon:NA19239_ch_T0000445:1;Name=LOC105377217;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	18925370	18926579	.	-	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;alternative_source_transcripts=hg002_chrY_paternal_346.1,hg002_chrY_paternal_346.1;transcript_id=NA19239_ch_T0000445;gene_id=NA19239_ch_G0000160;Parent=NA19239_ch_T0000445;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=intron:NA19239_ch_T0000445:1;Name=LOC105377217;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	18926580	18931921	.	-	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;alternative_source_transcripts=hg002_chrY_paternal_346.1,hg002_chrY_paternal_346.1;transcript_id=NA19239_ch_T0000445;gene_id=NA19239_ch_G0000160;Parent=NA19239_ch_T0000445;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=exon:NA19239_ch_T0000445:2;Name=LOC105377217;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	18943706	18948003	.	-	.	source_gene_common_name=FAM224A;source_gene=hg002_chrY_paternal_349;alternative_source_transcripts=hg002_chrY_paternal_349.1,hg002_chrY_paternal_349.1;gene_id=NA19239_ch_G0000161;gene_biotype=lncRNA;gene_name=FAM224A;gene_sources=liftoff;ID=NA19239_ch_G0000161;Name=FAM224A
NA19239_chrY	CAT	transcript	18943706	18948003	1000	-	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=hg002_chrY_paternal_349.1,hg002_chrY_paternal_349.1;transcript_id=NA19239_ch_T0000446;gene_id=NA19239_ch_G0000161;Parent=NA19239_ch_G0000161;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=NA19239_ch_T0000446;Name=FAM224A
NA19239_chrY	CAT	exon	18943706	18943889	.	-	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=hg002_chrY_paternal_349.1,hg002_chrY_paternal_349.1;transcript_id=NA19239_ch_T0000446;gene_id=NA19239_ch_G0000161;Parent=NA19239_ch_T0000446;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=exon:NA19239_ch_T0000446:0;Name=FAM224A;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	18943890	18945224	.	-	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=hg002_chrY_paternal_349.1,hg002_chrY_paternal_349.1;transcript_id=NA19239_ch_T0000446;gene_id=NA19239_ch_G0000161;Parent=NA19239_ch_T0000446;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=intron:NA19239_ch_T0000446:0;Name=FAM224A;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	18945225	18945342	.	-	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=hg002_chrY_paternal_349.1,hg002_chrY_paternal_349.1;transcript_id=NA19239_ch_T0000446;gene_id=NA19239_ch_G0000161;Parent=NA19239_ch_T0000446;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=exon:NA19239_ch_T0000446:1;Name=FAM224A;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	18945343	18947845	.	-	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=hg002_chrY_paternal_349.1,hg002_chrY_paternal_349.1;transcript_id=NA19239_ch_T0000446;gene_id=NA19239_ch_G0000161;Parent=NA19239_ch_T0000446;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=intron:NA19239_ch_T0000446:1;Name=FAM224A;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	18947846	18948003	.	-	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=hg002_chrY_paternal_349.1,hg002_chrY_paternal_349.1;transcript_id=NA19239_ch_T0000446;gene_id=NA19239_ch_G0000161;Parent=NA19239_ch_T0000446;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=exon:NA19239_ch_T0000446:2;Name=FAM224A;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	19057039	19057839	.	-	.	source_gene_common_name=LOC105377218;source_gene=hg002_chrY_paternal_386;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;gene_id=NA19239_ch_G0000162;gene_biotype=lncRNA;gene_name=LOC105377218;gene_sources=liftoff;ID=NA19239_ch_G0000162;Name=LOC105377218
NA19239_chrY	CAT	transcript	19057039	19057839	1000	-	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;transcript_id=NA19239_ch_T0000447;gene_id=NA19239_ch_G0000162;Parent=NA19239_ch_G0000162;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=NA19239_ch_T0000447;Name=LOC105377218
NA19239_chrY	CAT	exon	19057039	19057495	.	-	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;transcript_id=NA19239_ch_T0000447;gene_id=NA19239_ch_G0000162;Parent=NA19239_ch_T0000447;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=exon:NA19239_ch_T0000447:0;Name=LOC105377218;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19057496	19057583	.	-	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;transcript_id=NA19239_ch_T0000447;gene_id=NA19239_ch_G0000162;Parent=NA19239_ch_T0000447;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=intron:NA19239_ch_T0000447:0;Name=LOC105377218;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19057584	19057669	.	-	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;transcript_id=NA19239_ch_T0000447;gene_id=NA19239_ch_G0000162;Parent=NA19239_ch_T0000447;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=exon:NA19239_ch_T0000447:1;Name=LOC105377218;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19057670	19057756	.	-	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;transcript_id=NA19239_ch_T0000447;gene_id=NA19239_ch_G0000162;Parent=NA19239_ch_T0000447;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=intron:NA19239_ch_T0000447:1;Name=LOC105377218;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19057757	19057839	.	-	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;transcript_id=NA19239_ch_T0000447;gene_id=NA19239_ch_G0000162;Parent=NA19239_ch_T0000447;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=exon:NA19239_ch_T0000447:2;Name=LOC105377218;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	19061457	19068317	.	-	.	source_gene_common_name=LOC124905302;source_gene=hg002_chrY_paternal_385;alternative_source_transcripts=hg002_chrY_paternal_353.1,hg002_chrY_paternal_353.1;gene_id=NA19239_ch_G0000163;gene_biotype=lncRNA;gene_name=LOC124905302;gene_sources=liftoff;ID=NA19239_ch_G0000163;Name=LOC124905302
NA19239_chrY	CAT	transcript	19061457	19068317	1000	-	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;alternative_source_transcripts=hg002_chrY_paternal_353.1,hg002_chrY_paternal_353.1;transcript_id=NA19239_ch_T0000448;gene_id=NA19239_ch_G0000163;Parent=NA19239_ch_G0000163;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=NA19239_ch_T0000448;Name=LOC124905302
NA19239_chrY	CAT	exon	19061457	19065401	.	-	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;alternative_source_transcripts=hg002_chrY_paternal_353.1,hg002_chrY_paternal_353.1;transcript_id=NA19239_ch_T0000448;gene_id=NA19239_ch_G0000163;Parent=NA19239_ch_T0000448;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=exon:NA19239_ch_T0000448:0;Name=LOC124905302;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19065402	19065489	.	-	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;alternative_source_transcripts=hg002_chrY_paternal_353.1,hg002_chrY_paternal_353.1;transcript_id=NA19239_ch_T0000448;gene_id=NA19239_ch_G0000163;Parent=NA19239_ch_T0000448;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=intron:NA19239_ch_T0000448:0;Name=LOC124905302;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19065490	19066238	.	-	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;alternative_source_transcripts=hg002_chrY_paternal_353.1,hg002_chrY_paternal_353.1;transcript_id=NA19239_ch_T0000448;gene_id=NA19239_ch_G0000163;Parent=NA19239_ch_T0000448;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=exon:NA19239_ch_T0000448:1;Name=LOC124905302;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19066239	19066325	.	-	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;alternative_source_transcripts=hg002_chrY_paternal_353.1,hg002_chrY_paternal_353.1;transcript_id=NA19239_ch_T0000448;gene_id=NA19239_ch_G0000163;Parent=NA19239_ch_T0000448;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=intron:NA19239_ch_T0000448:1;Name=LOC124905302;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19066326	19068317	.	-	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;alternative_source_transcripts=hg002_chrY_paternal_353.1,hg002_chrY_paternal_353.1;transcript_id=NA19239_ch_T0000448;gene_id=NA19239_ch_G0000163;Parent=NA19239_ch_T0000448;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=exon:NA19239_ch_T0000448:2;Name=LOC124905302;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	19137509	19139089	.	-	.	source_gene_common_name=XKRY2;source_gene=hg002_chrY_paternal_380;alternative_source_transcripts=hg002_chrY_paternal_358.1,hg002_chrY_paternal_358.1;gene_id=NA19239_ch_G0000164;gene_biotype=transcribed_pseudogene;gene_name=XKRY2;gene_sources=liftoff;ID=NA19239_ch_G0000164;Name=XKRY2
NA19239_chrY	CAT	transcript	19137509	19139089	1000	-	.	source_transcript=hg002_chrY_paternal_380.1;source_transcript_name=hg002_chrY_paternal_380.1;source_gene=hg002_chrY_paternal_380;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_380;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_380.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_380.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY2;alternative_source_transcripts=hg002_chrY_paternal_358.1,hg002_chrY_paternal_358.1;transcript_id=NA19239_ch_T0000449;gene_id=NA19239_ch_G0000164;Parent=NA19239_ch_G0000164;transcript_name=hg002_chrY_paternal_380.1;gene_name=XKRY2;ID=NA19239_ch_T0000449;Name=XKRY2
NA19239_chrY	CAT	exon	19137509	19139089	.	-	.	source_transcript=hg002_chrY_paternal_380.1;source_transcript_name=hg002_chrY_paternal_380.1;source_gene=hg002_chrY_paternal_380;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_380;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_380.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_380.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY2;alternative_source_transcripts=hg002_chrY_paternal_358.1,hg002_chrY_paternal_358.1;transcript_id=NA19239_ch_T0000449;gene_id=NA19239_ch_G0000164;Parent=NA19239_ch_T0000449;transcript_name=hg002_chrY_paternal_380.1;gene_name=XKRY2;ID=exon:NA19239_ch_T0000449:0;Name=XKRY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	19246779	19248738	.	-	.	source_gene_common_name=CDY2A;source_gene=hg002_chrY_paternal_365;alternative_source_transcripts=hg002_chrY_paternal_365.1;gene_id=NA19239_ch_G0000165;gene_biotype=protein_coding;gene_name=CDY2A;gene_sources=augTM,transMap;ID=NA19239_ch_G0000165;Name=CDY2A
NA19239_chrY	CAT	transcript	19246779	19248738	9990	-	.	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=299.938;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000450;gene_id=NA19239_ch_G0000165;Parent=NA19239_ch_G0000165;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=NA19239_ch_T0000450;Name=CDY2A
NA19239_chrY	CAT	exon	19246779	19248738	.	-	.	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000450;gene_id=NA19239_ch_G0000165;Parent=NA19239_ch_T0000450;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=exon:NA19239_ch_T0000450:0;Name=CDY2A;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	19246785	19248410	.	-	0	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000450;gene_id=NA19239_ch_G0000165;Parent=NA19239_ch_T0000450;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=CDS:NA19239_ch_T0000450:0;Name=CDY2A;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	19246785	19246787	.	-	0	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000450;gene_id=NA19239_ch_G0000165;Parent=NA19239_ch_T0000450;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=stop_codon:NA19239_ch_T0000450;Name=CDY2A;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	19248408	19248410	.	-	0	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000450;gene_id=NA19239_ch_G0000165;Parent=NA19239_ch_T0000450;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=start_codon:NA19239_ch_T0000450;Name=CDY2A;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	19394318	19396278	.	+	.	source_gene_common_name=CDY2B;source_gene=hg002_chrY_paternal_373;alternative_source_transcripts=hg002_chrY_paternal_373.1;gene_id=NA19239_ch_G0000166;gene_biotype=protein_coding;gene_name=CDY2B;gene_sources=augTM,transMap;ID=NA19239_ch_G0000166;Name=CDY2B
NA19239_chrY	CAT	transcript	19394318	19396278	10000	+	.	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000451;gene_id=NA19239_ch_G0000166;Parent=NA19239_ch_G0000166;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=NA19239_ch_T0000451;Name=CDY2B
NA19239_chrY	CAT	exon	19394318	19396278	.	+	.	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000451;gene_id=NA19239_ch_G0000166;Parent=NA19239_ch_T0000451;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=exon:NA19239_ch_T0000451:0;Name=CDY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	19394646	19396271	.	+	0	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000451;gene_id=NA19239_ch_G0000166;Parent=NA19239_ch_T0000451;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=CDS:NA19239_ch_T0000451:0;Name=CDY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	19394646	19394648	.	+	0	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000451;gene_id=NA19239_ch_G0000166;Parent=NA19239_ch_T0000451;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=start_codon:NA19239_ch_T0000451;Name=CDY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	19396269	19396271	.	+	0	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000451;gene_id=NA19239_ch_G0000166;Parent=NA19239_ch_T0000451;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=stop_codon:NA19239_ch_T0000451;Name=CDY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	19503979	19505559	.	+	.	source_gene_common_name=XKRY;source_gene=hg002_chrY_paternal_358;alternative_source_transcripts=hg002_chrY_paternal_380.1,hg002_chrY_paternal_380.1;gene_id=NA19239_ch_G0000167;gene_biotype=transcribed_pseudogene;gene_name=XKRY;gene_sources=liftoff;ID=NA19239_ch_G0000167;Name=XKRY
NA19239_chrY	CAT	transcript	19503979	19505559	1000	+	.	source_transcript=hg002_chrY_paternal_358.1;source_transcript_name=hg002_chrY_paternal_358.1;source_gene=hg002_chrY_paternal_358;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_358;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_358.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_358.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;alternative_source_transcripts=hg002_chrY_paternal_380.1,hg002_chrY_paternal_380.1;transcript_id=NA19239_ch_T0000452;gene_id=NA19239_ch_G0000167;Parent=NA19239_ch_G0000167;transcript_name=hg002_chrY_paternal_358.1;gene_name=XKRY;ID=NA19239_ch_T0000452;Name=XKRY
NA19239_chrY	CAT	exon	19503979	19505559	.	+	.	source_transcript=hg002_chrY_paternal_358.1;source_transcript_name=hg002_chrY_paternal_358.1;source_gene=hg002_chrY_paternal_358;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_358;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_358.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_358.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;alternative_source_transcripts=hg002_chrY_paternal_380.1,hg002_chrY_paternal_380.1;transcript_id=NA19239_ch_T0000452;gene_id=NA19239_ch_G0000167;Parent=NA19239_ch_T0000452;transcript_name=hg002_chrY_paternal_358.1;gene_name=XKRY;ID=exon:NA19239_ch_T0000452:0;Name=XKRY;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	19574747	19581607	.	+	.	source_gene_common_name=LOC124905303;source_gene=hg002_chrY_paternal_353;alternative_source_transcripts=hg002_chrY_paternal_385.1,hg002_chrY_paternal_385.1;gene_id=NA19239_ch_G0000168;gene_biotype=lncRNA;gene_name=LOC124905303;gene_sources=liftoff;ID=NA19239_ch_G0000168;Name=LOC124905303
NA19239_chrY	CAT	transcript	19574747	19581607	1000	+	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_385.1,hg002_chrY_paternal_385.1;transcript_id=NA19239_ch_T0000453;gene_id=NA19239_ch_G0000168;Parent=NA19239_ch_G0000168;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=NA19239_ch_T0000453;Name=LOC124905303
NA19239_chrY	CAT	exon	19574747	19576738	.	+	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_385.1,hg002_chrY_paternal_385.1;transcript_id=NA19239_ch_T0000453;gene_id=NA19239_ch_G0000168;Parent=NA19239_ch_T0000453;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=exon:NA19239_ch_T0000453:0;Name=LOC124905303;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19576739	19576825	.	+	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_385.1,hg002_chrY_paternal_385.1;transcript_id=NA19239_ch_T0000453;gene_id=NA19239_ch_G0000168;Parent=NA19239_ch_T0000453;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=intron:NA19239_ch_T0000453:0;Name=LOC124905303;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19576826	19577574	.	+	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_385.1,hg002_chrY_paternal_385.1;transcript_id=NA19239_ch_T0000453;gene_id=NA19239_ch_G0000168;Parent=NA19239_ch_T0000453;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=exon:NA19239_ch_T0000453:1;Name=LOC124905303;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19577575	19577662	.	+	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_385.1,hg002_chrY_paternal_385.1;transcript_id=NA19239_ch_T0000453;gene_id=NA19239_ch_G0000168;Parent=NA19239_ch_T0000453;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=intron:NA19239_ch_T0000453:1;Name=LOC124905303;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19577663	19581607	.	+	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_385.1,hg002_chrY_paternal_385.1;transcript_id=NA19239_ch_T0000453;gene_id=NA19239_ch_G0000168;Parent=NA19239_ch_T0000453;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=exon:NA19239_ch_T0000453:2;Name=LOC124905303;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	19585225	19586025	.	+	.	source_gene_common_name=LOC105377219;source_gene=hg002_chrY_paternal_352;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;gene_id=NA19239_ch_G0000169;gene_biotype=lncRNA;gene_name=LOC105377219;gene_sources=liftoff;ID=NA19239_ch_G0000169;Name=LOC105377219
NA19239_chrY	CAT	transcript	19585225	19586025	1000	+	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;transcript_id=NA19239_ch_T0000454;gene_id=NA19239_ch_G0000169;Parent=NA19239_ch_G0000169;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=NA19239_ch_T0000454;Name=LOC105377219
NA19239_chrY	CAT	exon	19585225	19585307	.	+	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;transcript_id=NA19239_ch_T0000454;gene_id=NA19239_ch_G0000169;Parent=NA19239_ch_T0000454;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=exon:NA19239_ch_T0000454:0;Name=LOC105377219;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19585308	19585394	.	+	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;transcript_id=NA19239_ch_T0000454;gene_id=NA19239_ch_G0000169;Parent=NA19239_ch_T0000454;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=intron:NA19239_ch_T0000454:0;Name=LOC105377219;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19585395	19585480	.	+	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;transcript_id=NA19239_ch_T0000454;gene_id=NA19239_ch_G0000169;Parent=NA19239_ch_T0000454;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=exon:NA19239_ch_T0000454:1;Name=LOC105377219;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19585481	19585568	.	+	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;transcript_id=NA19239_ch_T0000454;gene_id=NA19239_ch_G0000169;Parent=NA19239_ch_T0000454;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=intron:NA19239_ch_T0000454:1;Name=LOC105377219;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19585569	19586025	.	+	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;transcript_id=NA19239_ch_T0000454;gene_id=NA19239_ch_G0000169;Parent=NA19239_ch_T0000454;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=exon:NA19239_ch_T0000454:2;Name=LOC105377219;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	19695050	19699346	.	+	.	source_gene_common_name=FAM224B;source_gene=hg002_chrY_paternal_389;alternative_source_transcripts=hg002_chrY_paternal_389.1,hg002_chrY_paternal_389.1;gene_id=NA19239_ch_G0000170;gene_biotype=lncRNA;gene_name=FAM224B;gene_sources=liftoff;ID=NA19239_ch_G0000170;Name=FAM224B
NA19239_chrY	CAT	transcript	19695050	19699346	1000	+	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=hg002_chrY_paternal_389.1,hg002_chrY_paternal_389.1;transcript_id=NA19239_ch_T0000455;gene_id=NA19239_ch_G0000170;Parent=NA19239_ch_G0000170;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=NA19239_ch_T0000455;Name=FAM224B
NA19239_chrY	CAT	exon	19695050	19695186	.	+	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=hg002_chrY_paternal_389.1,hg002_chrY_paternal_389.1;transcript_id=NA19239_ch_T0000455;gene_id=NA19239_ch_G0000170;Parent=NA19239_ch_T0000455;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=exon:NA19239_ch_T0000455:0;Name=FAM224B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19695187	19697686	.	+	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=hg002_chrY_paternal_389.1,hg002_chrY_paternal_389.1;transcript_id=NA19239_ch_T0000455;gene_id=NA19239_ch_G0000170;Parent=NA19239_ch_T0000455;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=intron:NA19239_ch_T0000455:0;Name=FAM224B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19697687	19697804	.	+	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=hg002_chrY_paternal_389.1,hg002_chrY_paternal_389.1;transcript_id=NA19239_ch_T0000455;gene_id=NA19239_ch_G0000170;Parent=NA19239_ch_T0000455;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=exon:NA19239_ch_T0000455:1;Name=FAM224B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19697805	19699139	.	+	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=hg002_chrY_paternal_389.1,hg002_chrY_paternal_389.1;transcript_id=NA19239_ch_T0000455;gene_id=NA19239_ch_G0000170;Parent=NA19239_ch_T0000455;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=intron:NA19239_ch_T0000455:1;Name=FAM224B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19699140	19699346	.	+	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=hg002_chrY_paternal_389.1,hg002_chrY_paternal_389.1;transcript_id=NA19239_ch_T0000455;gene_id=NA19239_ch_G0000170;Parent=NA19239_ch_T0000455;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=exon:NA19239_ch_T0000455:2;Name=FAM224B;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	19715672	19720362	.	+	.	source_gene_common_name=LOC105377220;source_gene=hg002_chrY_paternal_391;alternative_source_transcripts=hg002_chrY_paternal_391.1,hg002_chrY_paternal_391.1;gene_id=NA19239_ch_G0000171;gene_biotype=lncRNA;gene_name=LOC105377220;gene_sources=liftoff;ID=NA19239_ch_G0000171;Name=LOC105377220
NA19239_chrY	CAT	transcript	19715672	19720362	1000	+	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;alternative_source_transcripts=hg002_chrY_paternal_391.1,hg002_chrY_paternal_391.1;transcript_id=NA19239_ch_T0000456;gene_id=NA19239_ch_G0000171;Parent=NA19239_ch_G0000171;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=NA19239_ch_T0000456;Name=LOC105377220
NA19239_chrY	CAT	exon	19715672	19716446	.	+	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;alternative_source_transcripts=hg002_chrY_paternal_391.1,hg002_chrY_paternal_391.1;transcript_id=NA19239_ch_T0000456;gene_id=NA19239_ch_G0000171;Parent=NA19239_ch_T0000456;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=exon:NA19239_ch_T0000456:0;Name=LOC105377220;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19716447	19717656	.	+	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;alternative_source_transcripts=hg002_chrY_paternal_391.1,hg002_chrY_paternal_391.1;transcript_id=NA19239_ch_T0000456;gene_id=NA19239_ch_G0000171;Parent=NA19239_ch_T0000456;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=intron:NA19239_ch_T0000456:0;Name=LOC105377220;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19717657	19717785	.	+	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;alternative_source_transcripts=hg002_chrY_paternal_391.1,hg002_chrY_paternal_391.1;transcript_id=NA19239_ch_T0000456;gene_id=NA19239_ch_G0000171;Parent=NA19239_ch_T0000456;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=exon:NA19239_ch_T0000456:1;Name=LOC105377220;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19717786	19718495	.	+	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;alternative_source_transcripts=hg002_chrY_paternal_391.1,hg002_chrY_paternal_391.1;transcript_id=NA19239_ch_T0000456;gene_id=NA19239_ch_G0000171;Parent=NA19239_ch_T0000456;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=intron:NA19239_ch_T0000456:1;Name=LOC105377220;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19718496	19720362	.	+	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;alternative_source_transcripts=hg002_chrY_paternal_391.1,hg002_chrY_paternal_391.1;transcript_id=NA19239_ch_T0000456;gene_id=NA19239_ch_G0000171;Parent=NA19239_ch_T0000456;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=exon:NA19239_ch_T0000456:2;Name=LOC105377220;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	19757765	19773545	.	-	.	source_gene_common_name=FAM41AY1;source_gene=hg002_chrY_paternal_394;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;gene_id=NA19239_ch_G0000172;gene_biotype=lncRNA;gene_name=FAM41AY1;gene_sources=liftoff;ID=NA19239_ch_G0000172;Name=FAM41AY1
NA19239_chrY	CAT	transcript	19757765	19773545	1000	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19239_ch_T0000457;gene_id=NA19239_ch_G0000172;Parent=NA19239_ch_G0000172;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=NA19239_ch_T0000457;Name=FAM41AY1
NA19239_chrY	CAT	exon	19757765	19758491	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19239_ch_T0000457;gene_id=NA19239_ch_G0000172;Parent=NA19239_ch_T0000457;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:NA19239_ch_T0000457:0;Name=FAM41AY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19758492	19758573	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19239_ch_T0000457;gene_id=NA19239_ch_G0000172;Parent=NA19239_ch_T0000457;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:NA19239_ch_T0000457:0;Name=FAM41AY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19758574	19758795	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19239_ch_T0000457;gene_id=NA19239_ch_G0000172;Parent=NA19239_ch_T0000457;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:NA19239_ch_T0000457:1;Name=FAM41AY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19758796	19759007	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19239_ch_T0000457;gene_id=NA19239_ch_G0000172;Parent=NA19239_ch_T0000457;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:NA19239_ch_T0000457:1;Name=FAM41AY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19759008	19759195	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19239_ch_T0000457;gene_id=NA19239_ch_G0000172;Parent=NA19239_ch_T0000457;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:NA19239_ch_T0000457:2;Name=FAM41AY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19759196	19759488	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19239_ch_T0000457;gene_id=NA19239_ch_G0000172;Parent=NA19239_ch_T0000457;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:NA19239_ch_T0000457:2;Name=FAM41AY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19759489	19759698	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19239_ch_T0000457;gene_id=NA19239_ch_G0000172;Parent=NA19239_ch_T0000457;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:NA19239_ch_T0000457:3;Name=FAM41AY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19759699	19759972	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19239_ch_T0000457;gene_id=NA19239_ch_G0000172;Parent=NA19239_ch_T0000457;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:NA19239_ch_T0000457:3;Name=FAM41AY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19759973	19760066	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19239_ch_T0000457;gene_id=NA19239_ch_G0000172;Parent=NA19239_ch_T0000457;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:NA19239_ch_T0000457:4;Name=FAM41AY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19760067	19760175	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19239_ch_T0000457;gene_id=NA19239_ch_G0000172;Parent=NA19239_ch_T0000457;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:NA19239_ch_T0000457:4;Name=FAM41AY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19760176	19760346	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19239_ch_T0000457;gene_id=NA19239_ch_G0000172;Parent=NA19239_ch_T0000457;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:NA19239_ch_T0000457:5;Name=FAM41AY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19760347	19760939	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19239_ch_T0000457;gene_id=NA19239_ch_G0000172;Parent=NA19239_ch_T0000457;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:NA19239_ch_T0000457:5;Name=FAM41AY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19760940	19761033	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19239_ch_T0000457;gene_id=NA19239_ch_G0000172;Parent=NA19239_ch_T0000457;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:NA19239_ch_T0000457:6;Name=FAM41AY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19761034	19761280	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19239_ch_T0000457;gene_id=NA19239_ch_G0000172;Parent=NA19239_ch_T0000457;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:NA19239_ch_T0000457:6;Name=FAM41AY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19761281	19761409	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19239_ch_T0000457;gene_id=NA19239_ch_G0000172;Parent=NA19239_ch_T0000457;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:NA19239_ch_T0000457:7;Name=FAM41AY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19761410	19772742	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19239_ch_T0000457;gene_id=NA19239_ch_G0000172;Parent=NA19239_ch_T0000457;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:NA19239_ch_T0000457:7;Name=FAM41AY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19772743	19772792	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19239_ch_T0000457;gene_id=NA19239_ch_G0000172;Parent=NA19239_ch_T0000457;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:NA19239_ch_T0000457:8;Name=FAM41AY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19772793	19773387	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19239_ch_T0000457;gene_id=NA19239_ch_G0000172;Parent=NA19239_ch_T0000457;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:NA19239_ch_T0000457:8;Name=FAM41AY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19773388	19773545	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19239_ch_T0000457;gene_id=NA19239_ch_G0000172;Parent=NA19239_ch_T0000457;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:NA19239_ch_T0000457:9;Name=FAM41AY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	19852528	19886349	.	+	.	source_gene_common_name=LOC124905304;source_gene=hg002_chrY_paternal_398;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;gene_id=NA19239_ch_G0000173;gene_biotype=lncRNA;gene_name=LOC124905304;gene_sources=liftoff;ID=NA19239_ch_G0000173;Name=LOC124905304
NA19239_chrY	CAT	transcript	19852528	19886349	1000	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=NA19239_ch_T0000458;gene_id=NA19239_ch_G0000173;Parent=NA19239_ch_G0000173;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=NA19239_ch_T0000458;Name=LOC124905304
NA19239_chrY	CAT	exon	19852528	19852568	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=NA19239_ch_T0000458;gene_id=NA19239_ch_G0000173;Parent=NA19239_ch_T0000458;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:NA19239_ch_T0000458:0;Name=LOC124905304;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19852569	19854969	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=NA19239_ch_T0000458;gene_id=NA19239_ch_G0000173;Parent=NA19239_ch_T0000458;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:NA19239_ch_T0000458:0;Name=LOC124905304;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19854970	19855132	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=NA19239_ch_T0000458;gene_id=NA19239_ch_G0000173;Parent=NA19239_ch_T0000458;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:NA19239_ch_T0000458:1;Name=LOC124905304;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19855133	19855790	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=NA19239_ch_T0000458;gene_id=NA19239_ch_G0000173;Parent=NA19239_ch_T0000458;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:NA19239_ch_T0000458:1;Name=LOC124905304;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19855791	19855892	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=NA19239_ch_T0000458;gene_id=NA19239_ch_G0000173;Parent=NA19239_ch_T0000458;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:NA19239_ch_T0000458:2;Name=LOC124905304;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19855893	19858254	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=NA19239_ch_T0000458;gene_id=NA19239_ch_G0000173;Parent=NA19239_ch_T0000458;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:NA19239_ch_T0000458:2;Name=LOC124905304;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19858255	19858458	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=NA19239_ch_T0000458;gene_id=NA19239_ch_G0000173;Parent=NA19239_ch_T0000458;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:NA19239_ch_T0000458:3;Name=LOC124905304;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19858459	19860174	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=NA19239_ch_T0000458;gene_id=NA19239_ch_G0000173;Parent=NA19239_ch_T0000458;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:NA19239_ch_T0000458:3;Name=LOC124905304;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19860175	19860309	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=NA19239_ch_T0000458;gene_id=NA19239_ch_G0000173;Parent=NA19239_ch_T0000458;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:NA19239_ch_T0000458:4;Name=LOC124905304;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19860310	19869105	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=NA19239_ch_T0000458;gene_id=NA19239_ch_G0000173;Parent=NA19239_ch_T0000458;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:NA19239_ch_T0000458:4;Name=LOC124905304;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19869106	19869338	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=NA19239_ch_T0000458;gene_id=NA19239_ch_G0000173;Parent=NA19239_ch_T0000458;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:NA19239_ch_T0000458:5;Name=LOC124905304;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19869339	19869431	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=NA19239_ch_T0000458;gene_id=NA19239_ch_G0000173;Parent=NA19239_ch_T0000458;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:NA19239_ch_T0000458:5;Name=LOC124905304;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19869432	19869537	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=NA19239_ch_T0000458;gene_id=NA19239_ch_G0000173;Parent=NA19239_ch_T0000458;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:NA19239_ch_T0000458:6;Name=LOC124905304;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19869538	19875148	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=NA19239_ch_T0000458;gene_id=NA19239_ch_G0000173;Parent=NA19239_ch_T0000458;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:NA19239_ch_T0000458:6;Name=LOC124905304;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19875149	19875276	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=NA19239_ch_T0000458;gene_id=NA19239_ch_G0000173;Parent=NA19239_ch_T0000458;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:NA19239_ch_T0000458:7;Name=LOC124905304;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19875277	19884041	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=NA19239_ch_T0000458;gene_id=NA19239_ch_G0000173;Parent=NA19239_ch_T0000458;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:NA19239_ch_T0000458:7;Name=LOC124905304;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19884042	19886349	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=NA19239_ch_T0000458;gene_id=NA19239_ch_G0000173;Parent=NA19239_ch_T0000458;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:NA19239_ch_T0000458:8;Name=LOC124905304;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	19898124	19957448	.	+	.	source_gene_common_name=HSFY1;source_gene=hg002_chrY_paternal_403;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;gene_id=NA19239_ch_G0000174;gene_biotype=protein_coding;gene_name=HSFY1;gene_sources=liftoff,augTM;ID=NA19239_ch_G0000174;Name=HSFY1
NA19239_chrY	CAT	transcript	19898124	19917066	100	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000459;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_G0000174;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=NA19239_ch_T0000459;Name=HSFY1
NA19239_chrY	CAT	exon	19898124	19898318	.	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000459;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000459;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:NA19239_ch_T0000459:0;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	19898293	19898318	.	+	0	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000459;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000459;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:NA19239_ch_T0000459:0;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	19898293	19898295	.	+	0	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000459;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000459;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=start_codon:NA19239_ch_T0000459;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19898319	19915506	.	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000459;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000459;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:NA19239_ch_T0000459:0;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19915507	19915774	.	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000459;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000459;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:NA19239_ch_T0000459:1;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	19915507	19915774	.	+	1	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000459;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000459;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:NA19239_ch_T0000459:1;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19915775	19916252	.	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000459;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000459;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:NA19239_ch_T0000459:1;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19916253	19917066	.	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000459;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000459;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:NA19239_ch_T0000459:2;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	19916253	19916945	.	+	0	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000459;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000459;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:NA19239_ch_T0000459:2;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	19916943	19916945	.	+	0	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000459;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000459;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=stop_codon:NA19239_ch_T0000459;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	19915155	19917066	100	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000460;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_G0000174;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=NA19239_ch_T0000460;Name=HSFY1
NA19239_chrY	CAT	exon	19915155	19915408	.	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000460;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000460;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:NA19239_ch_T0000460:0;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	19915398	19915408	.	+	0	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000460;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000460;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:NA19239_ch_T0000460:0;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	19915398	19915400	.	+	0	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000460;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000460;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=start_codon:NA19239_ch_T0000460;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19915409	19915506	.	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000460;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000460;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:NA19239_ch_T0000460:0;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19915507	19915774	.	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000460;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000460;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:NA19239_ch_T0000460:1;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	19915507	19915774	.	+	1	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000460;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000460;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:NA19239_ch_T0000460:1;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19915775	19916252	.	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000460;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000460;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:NA19239_ch_T0000460:1;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19916253	19917066	.	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000460;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000460;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:NA19239_ch_T0000460:2;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	19916253	19916945	.	+	0	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000460;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000460;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:NA19239_ch_T0000460:2;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	19916943	19916945	.	+	0	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000460;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000460;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=stop_codon:NA19239_ch_T0000460;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	19915165	19957448	100	+	.	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000461;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_G0000174;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=NA19239_ch_T0000461;Name=HSFY1
NA19239_chrY	CAT	exon	19915165	19915774	.	+	.	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000461;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000461;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:NA19239_ch_T0000461:0;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	19915262	19915774	.	+	0	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000461;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000461;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:NA19239_ch_T0000461:0;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	19915262	19915264	.	+	0	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000461;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000461;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=start_codon:NA19239_ch_T0000461;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19915775	19957020	.	+	.	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000461;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000461;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:NA19239_ch_T0000461:0;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19957021	19957448	.	+	.	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000461;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000461;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:NA19239_ch_T0000461:1;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	19957021	19957119	.	+	0	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000461;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000461;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:NA19239_ch_T0000461:1;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	19957117	19957119	.	+	0	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000461;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000461;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=stop_codon:NA19239_ch_T0000461;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	19915165	19920546	1000	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000462;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_G0000174;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=NA19239_ch_T0000462;Name=HSFY1
NA19239_chrY	CAT	exon	19915165	19915774	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000462;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000462;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:NA19239_ch_T0000462:0;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19915775	19918587	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000462;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000462;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:NA19239_ch_T0000462:0;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19918588	19918697	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000462;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000462;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:NA19239_ch_T0000462:1;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19918698	19919256	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000462;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000462;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:NA19239_ch_T0000462:1;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19919257	19919343	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000462;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000462;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:NA19239_ch_T0000462:2;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19919344	19920390	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000462;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000462;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:NA19239_ch_T0000462:2;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19920391	19920546	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000462;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000462;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:NA19239_ch_T0000462:3;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	19915165	19957448	1000	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000463;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_G0000174;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=NA19239_ch_T0000463;Name=HSFY1
NA19239_chrY	CAT	exon	19915165	19915774	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000463;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000463;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:NA19239_ch_T0000463:0;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19915775	19918587	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000463;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000463;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:NA19239_ch_T0000463:0;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19918588	19918697	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000463;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000463;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:NA19239_ch_T0000463:1;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19918698	19919256	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000463;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000463;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:NA19239_ch_T0000463:1;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19919257	19919343	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000463;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000463;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:NA19239_ch_T0000463:2;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19919344	19920390	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000463;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000463;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:NA19239_ch_T0000463:2;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19920391	19920545	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000463;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000463;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:NA19239_ch_T0000463:3;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19920546	19951157	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000463;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000463;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:NA19239_ch_T0000463:3;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19951158	19951243	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000463;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000463;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:NA19239_ch_T0000463:4;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19951244	19957020	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000463;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000463;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:NA19239_ch_T0000463:4;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19957021	19957448	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000463;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000463;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:NA19239_ch_T0000463:5;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	19915194	19917066	100	+	.	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000464;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_G0000174;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=NA19239_ch_T0000464;Name=HSFY1
NA19239_chrY	CAT	exon	19915194	19915774	.	+	.	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000464;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000464;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:NA19239_ch_T0000464:0;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	19915262	19915774	.	+	0	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000464;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000464;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:NA19239_ch_T0000464:0;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	19915262	19915264	.	+	0	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000464;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000464;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=start_codon:NA19239_ch_T0000464;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19915775	19916252	.	+	.	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000464;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000464;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:NA19239_ch_T0000464:0;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19916253	19917066	.	+	.	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000464;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000464;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:NA19239_ch_T0000464:1;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	19916253	19916945	.	+	0	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000464;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000464;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:NA19239_ch_T0000464:1;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	19916943	19916945	.	+	0	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000464;gene_id=NA19239_ch_G0000174;Parent=NA19239_ch_T0000464;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=stop_codon:NA19239_ch_T0000464;Name=HSFY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	19949691	19959006	.	-	.	source_gene_common_name=TTTY9A;source_gene=hg002_chrY_paternal_412;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;gene_id=NA19239_ch_G0000175;gene_biotype=lncRNA;gene_name=TTTY9A;gene_sources=liftoff;ID=NA19239_ch_G0000175;Name=TTTY9A
NA19239_chrY	CAT	transcript	19949691	19959006	1000	-	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=NA19239_ch_T0000465;gene_id=NA19239_ch_G0000175;Parent=NA19239_ch_G0000175;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=NA19239_ch_T0000465;Name=TTTY9A
NA19239_chrY	CAT	exon	19949691	19950833	.	-	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=NA19239_ch_T0000465;gene_id=NA19239_ch_G0000175;Parent=NA19239_ch_T0000465;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:NA19239_ch_T0000465:0;Name=TTTY9A;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19950834	19955896	.	-	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=NA19239_ch_T0000465;gene_id=NA19239_ch_G0000175;Parent=NA19239_ch_T0000465;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=intron:NA19239_ch_T0000465:0;Name=TTTY9A;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19955897	19956033	.	-	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=NA19239_ch_T0000465;gene_id=NA19239_ch_G0000175;Parent=NA19239_ch_T0000465;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:NA19239_ch_T0000465:1;Name=TTTY9A;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19956034	19956615	.	-	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=NA19239_ch_T0000465;gene_id=NA19239_ch_G0000175;Parent=NA19239_ch_T0000465;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=intron:NA19239_ch_T0000465:1;Name=TTTY9A;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19956616	19956729	.	-	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=NA19239_ch_T0000465;gene_id=NA19239_ch_G0000175;Parent=NA19239_ch_T0000465;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:NA19239_ch_T0000465:2;Name=TTTY9A;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19956730	19957090	.	-	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=NA19239_ch_T0000465;gene_id=NA19239_ch_G0000175;Parent=NA19239_ch_T0000465;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=intron:NA19239_ch_T0000465:2;Name=TTTY9A;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19957091	19957191	.	-	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=NA19239_ch_T0000465;gene_id=NA19239_ch_G0000175;Parent=NA19239_ch_T0000465;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:NA19239_ch_T0000465:3;Name=TTTY9A;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	19957192	19958864	.	-	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=NA19239_ch_T0000465;gene_id=NA19239_ch_G0000175;Parent=NA19239_ch_T0000465;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=intron:NA19239_ch_T0000465:3;Name=TTTY9A;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	19958865	19959006	.	-	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=NA19239_ch_T0000465;gene_id=NA19239_ch_G0000175;Parent=NA19239_ch_T0000465;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:NA19239_ch_T0000465:4;Name=TTTY9A;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	20098394	20107710	.	+	.	source_gene_common_name=TTTY9A;source_gene=hg002_chrY_paternal_412;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;gene_id=NA19239_ch_G0000176;gene_biotype=lncRNA;gene_name=TTTY9A;gene_sources=liftoff;ID=NA19239_ch_G0000176;Name=TTTY9A
NA19239_chrY	CAT	transcript	20098394	20107710	1000	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=NA19239_ch_T0000466;gene_id=NA19239_ch_G0000176;Parent=NA19239_ch_G0000176;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=NA19239_ch_T0000466;Name=TTTY9A
NA19239_chrY	CAT	exon	20098394	20098535	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=NA19239_ch_T0000466;gene_id=NA19239_ch_G0000176;Parent=NA19239_ch_T0000466;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:NA19239_ch_T0000466:0;Name=TTTY9A;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20098536	20100209	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=NA19239_ch_T0000466;gene_id=NA19239_ch_G0000176;Parent=NA19239_ch_T0000466;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=intron:NA19239_ch_T0000466:0;Name=TTTY9A;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20100210	20100310	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=NA19239_ch_T0000466;gene_id=NA19239_ch_G0000176;Parent=NA19239_ch_T0000466;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:NA19239_ch_T0000466:1;Name=TTTY9A;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20100311	20100671	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=NA19239_ch_T0000466;gene_id=NA19239_ch_G0000176;Parent=NA19239_ch_T0000466;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=intron:NA19239_ch_T0000466:1;Name=TTTY9A;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20100672	20100785	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=NA19239_ch_T0000466;gene_id=NA19239_ch_G0000176;Parent=NA19239_ch_T0000466;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:NA19239_ch_T0000466:2;Name=TTTY9A;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20100786	20101367	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=NA19239_ch_T0000466;gene_id=NA19239_ch_G0000176;Parent=NA19239_ch_T0000466;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=intron:NA19239_ch_T0000466:2;Name=TTTY9A;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20101368	20101504	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=NA19239_ch_T0000466;gene_id=NA19239_ch_G0000176;Parent=NA19239_ch_T0000466;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:NA19239_ch_T0000466:3;Name=TTTY9A;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20101505	20106567	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=NA19239_ch_T0000466;gene_id=NA19239_ch_G0000176;Parent=NA19239_ch_T0000466;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=intron:NA19239_ch_T0000466:3;Name=TTTY9A;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20106568	20107710	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=NA19239_ch_T0000466;gene_id=NA19239_ch_G0000176;Parent=NA19239_ch_T0000466;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:NA19239_ch_T0000466:4;Name=TTTY9A;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	20099953	20159293	.	-	.	source_gene_common_name=HSFY2;source_gene=hg002_chrY_paternal_413;alternative_source_transcripts=hg002_chrY_paternal_413.1;gene_id=NA19239_ch_G0000177;gene_biotype=protein_coding;gene_name=HSFY2;gene_sources=augTM,transMap;ID=NA19239_ch_G0000177;Name=HSFY2
NA19239_chrY	CAT	transcript	20099953	20142262	1000	-	.	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000467;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_G0000177;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=NA19239_ch_T0000467;Name=HSFY2
NA19239_chrY	CAT	exon	20099953	20100380	.	-	.	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000467;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000467;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=exon:NA19239_ch_T0000467:0;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	20100282	20100380	.	-	0	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000467;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000467;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=CDS:NA19239_ch_T0000467:0;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	20100282	20100284	.	-	0	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000467;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000467;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=stop_codon:NA19239_ch_T0000467;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20100381	20141632	.	-	.	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000467;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000467;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=intron:NA19239_ch_T0000467:0;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20141633	20142262	.	-	.	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000467;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000467;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=exon:NA19239_ch_T0000467:1;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	20141633	20142145	.	-	0	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000467;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000467;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=CDS:NA19239_ch_T0000467:1;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	20142143	20142145	.	-	0	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000467;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000467;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=start_codon:NA19239_ch_T0000467;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	20099953	20142262	1000	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000468;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_G0000177;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=NA19239_ch_T0000468;Name=HSFY2
NA19239_chrY	CAT	exon	20099953	20100380	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000468;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000468;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=exon:NA19239_ch_T0000468:0;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20100381	20106157	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000468;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000468;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=intron:NA19239_ch_T0000468:0;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20106158	20106243	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000468;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000468;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=exon:NA19239_ch_T0000468:1;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20106244	20136857	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000468;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000468;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=intron:NA19239_ch_T0000468:1;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20136858	20137012	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000468;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000468;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=exon:NA19239_ch_T0000468:2;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20137013	20138059	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000468;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000468;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=intron:NA19239_ch_T0000468:2;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20138060	20138146	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000468;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000468;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=exon:NA19239_ch_T0000468:3;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20138147	20138709	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000468;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000468;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=intron:NA19239_ch_T0000468:3;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20138710	20138819	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000468;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000468;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=exon:NA19239_ch_T0000468:4;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20138820	20141632	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000468;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000468;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=intron:NA19239_ch_T0000468:4;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20141633	20142262	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000468;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000468;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=exon:NA19239_ch_T0000468:5;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	20138035	20142262	1000	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000469;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_G0000177;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=NA19239_ch_T0000469;Name=HSFY2
NA19239_chrY	CAT	exon	20138035	20138146	.	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000469;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000469;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=exon:NA19239_ch_T0000469:0;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	20138125	20138146	.	-	1	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000469;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000469;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=CDS:NA19239_ch_T0000469:0;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	20138125	20138127	.	-	0	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000469;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000469;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=stop_codon:NA19239_ch_T0000469;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20138147	20138709	.	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000469;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000469;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=intron:NA19239_ch_T0000469:0;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20138710	20138819	.	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000469;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000469;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=exon:NA19239_ch_T0000469:1;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	20138710	20138819	.	-	0	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000469;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000469;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=CDS:NA19239_ch_T0000469:1;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20138820	20141632	.	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000469;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000469;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=intron:NA19239_ch_T0000469:1;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20141633	20142262	.	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000469;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000469;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=exon:NA19239_ch_T0000469:2;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	20141633	20142145	.	-	0	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000469;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000469;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=CDS:NA19239_ch_T0000469:2;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	20142143	20142145	.	-	0	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000469;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000469;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=start_codon:NA19239_ch_T0000469;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	20140341	20142253	1000	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000470;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_G0000177;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=NA19239_ch_T0000470;Name=HSFY2
NA19239_chrY	CAT	exon	20140341	20141154	.	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000470;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000470;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=exon:NA19239_ch_T0000470:0;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	20140462	20141154	.	-	0	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000470;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000470;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=CDS:NA19239_ch_T0000470:0;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	20140462	20140464	.	-	0	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000470;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000470;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=stop_codon:NA19239_ch_T0000470;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20141155	20141632	.	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000470;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000470;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=intron:NA19239_ch_T0000470:0;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20141633	20141900	.	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000470;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000470;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=exon:NA19239_ch_T0000470:1;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	20141633	20141900	.	-	1	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000470;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000470;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=CDS:NA19239_ch_T0000470:1;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20141901	20141998	.	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000470;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000470;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=intron:NA19239_ch_T0000470:1;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20141999	20142253	.	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000470;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000470;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=exon:NA19239_ch_T0000470:2;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	20141999	20142009	.	-	0	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000470;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000470;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=CDS:NA19239_ch_T0000470:2;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	20142007	20142009	.	-	0	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000470;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000470;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=start_codon:NA19239_ch_T0000470;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	20140341	20142262	1000	-	.	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000471;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_G0000177;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=NA19239_ch_T0000471;Name=HSFY2
NA19239_chrY	CAT	exon	20140341	20141154	.	-	.	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000471;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000471;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=exon:NA19239_ch_T0000471:0;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	20140462	20141154	.	-	0	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000471;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000471;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=CDS:NA19239_ch_T0000471:0;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	20140462	20140464	.	-	0	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000471;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000471;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=stop_codon:NA19239_ch_T0000471;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20141155	20141632	.	-	.	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000471;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000471;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=intron:NA19239_ch_T0000471:0;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20141633	20142262	.	-	.	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000471;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000471;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=exon:NA19239_ch_T0000471:1;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	20141633	20142145	.	-	0	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000471;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000471;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=CDS:NA19239_ch_T0000471:1;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	20142143	20142145	.	-	0	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000471;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000471;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=start_codon:NA19239_ch_T0000471;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	20140341	20159293	1000	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000472;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_G0000177;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=NA19239_ch_T0000472;Name=HSFY2
NA19239_chrY	CAT	exon	20140341	20141154	.	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000472;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000472;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=exon:NA19239_ch_T0000472:0;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	20140462	20141154	.	-	0	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000472;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000472;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=CDS:NA19239_ch_T0000472:0;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	20140462	20140464	.	-	0	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000472;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000472;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=stop_codon:NA19239_ch_T0000472;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20141155	20141632	.	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000472;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000472;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=intron:NA19239_ch_T0000472:0;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20141633	20141900	.	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000472;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000472;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=exon:NA19239_ch_T0000472:1;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	20141633	20141900	.	-	1	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000472;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000472;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=CDS:NA19239_ch_T0000472:1;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20141901	20159098	.	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000472;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000472;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=intron:NA19239_ch_T0000472:1;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20159099	20159293	.	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000472;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000472;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=exon:NA19239_ch_T0000472:2;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	20159099	20159124	.	-	0	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000472;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000472;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=CDS:NA19239_ch_T0000472:2;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	20159122	20159124	.	-	0	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.2;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000472;gene_id=NA19239_ch_G0000177;Parent=NA19239_ch_T0000472;transcript_name=hg002_chrY_paternal_413.2;gene_name=HSFY2;ID=start_codon:NA19239_ch_T0000472;Name=HSFY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	20171070	20204919	.	-	.	source_gene_common_name=LOC124905305;source_gene=hg002_chrY_paternal_418;gene_id=NA19239_ch_G0000178;gene_biotype=lncRNA;gene_name=LOC124905305;gene_sources=liftoff;ID=NA19239_ch_G0000178;Name=LOC124905305
NA19239_chrY	CAT	transcript	20171070	20204917	1000	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19239_ch_T0000473;gene_id=NA19239_ch_G0000178;Parent=NA19239_ch_G0000178;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=NA19239_ch_T0000473;Name=LOC124905305
NA19239_chrY	CAT	exon	20171070	20173377	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19239_ch_T0000473;gene_id=NA19239_ch_G0000178;Parent=NA19239_ch_T0000473;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:NA19239_ch_T0000473:0;Name=LOC124905305;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20173378	20182142	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19239_ch_T0000473;gene_id=NA19239_ch_G0000178;Parent=NA19239_ch_T0000473;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:NA19239_ch_T0000473:0;Name=LOC124905305;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20182143	20182270	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19239_ch_T0000473;gene_id=NA19239_ch_G0000178;Parent=NA19239_ch_T0000473;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:NA19239_ch_T0000473:1;Name=LOC124905305;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20182271	20187881	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19239_ch_T0000473;gene_id=NA19239_ch_G0000178;Parent=NA19239_ch_T0000473;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:NA19239_ch_T0000473:1;Name=LOC124905305;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20187882	20188313	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19239_ch_T0000473;gene_id=NA19239_ch_G0000178;Parent=NA19239_ch_T0000473;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:NA19239_ch_T0000473:2;Name=LOC124905305;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20188314	20197100	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19239_ch_T0000473;gene_id=NA19239_ch_G0000178;Parent=NA19239_ch_T0000473;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:NA19239_ch_T0000473:2;Name=LOC124905305;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20197101	20197235	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19239_ch_T0000473;gene_id=NA19239_ch_G0000178;Parent=NA19239_ch_T0000473;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:NA19239_ch_T0000473:3;Name=LOC124905305;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20197236	20198950	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19239_ch_T0000473;gene_id=NA19239_ch_G0000178;Parent=NA19239_ch_T0000473;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:NA19239_ch_T0000473:3;Name=LOC124905305;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20198951	20199154	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19239_ch_T0000473;gene_id=NA19239_ch_G0000178;Parent=NA19239_ch_T0000473;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:NA19239_ch_T0000473:4;Name=LOC124905305;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20199155	20201516	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19239_ch_T0000473;gene_id=NA19239_ch_G0000178;Parent=NA19239_ch_T0000473;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:NA19239_ch_T0000473:4;Name=LOC124905305;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20201517	20201618	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19239_ch_T0000473;gene_id=NA19239_ch_G0000178;Parent=NA19239_ch_T0000473;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:NA19239_ch_T0000473:5;Name=LOC124905305;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20201619	20202276	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19239_ch_T0000473;gene_id=NA19239_ch_G0000178;Parent=NA19239_ch_T0000473;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:NA19239_ch_T0000473:5;Name=LOC124905305;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20202277	20202439	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19239_ch_T0000473;gene_id=NA19239_ch_G0000178;Parent=NA19239_ch_T0000473;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:NA19239_ch_T0000473:6;Name=LOC124905305;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20202440	20204840	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19239_ch_T0000473;gene_id=NA19239_ch_G0000178;Parent=NA19239_ch_T0000473;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:NA19239_ch_T0000473:6;Name=LOC124905305;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20204841	20204917	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19239_ch_T0000473;gene_id=NA19239_ch_G0000178;Parent=NA19239_ch_T0000473;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:NA19239_ch_T0000473:7;Name=LOC124905305;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	20171070	20204919	1000	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19239_ch_T0000474;gene_id=NA19239_ch_G0000178;Parent=NA19239_ch_G0000178;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=NA19239_ch_T0000474;Name=LOC124905305
NA19239_chrY	CAT	exon	20171070	20173377	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19239_ch_T0000474;gene_id=NA19239_ch_G0000178;Parent=NA19239_ch_T0000474;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:NA19239_ch_T0000474:0;Name=LOC124905305;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20173378	20187881	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19239_ch_T0000474;gene_id=NA19239_ch_G0000178;Parent=NA19239_ch_T0000474;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:NA19239_ch_T0000474:0;Name=LOC124905305;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20187882	20188313	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19239_ch_T0000474;gene_id=NA19239_ch_G0000178;Parent=NA19239_ch_T0000474;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:NA19239_ch_T0000474:1;Name=LOC124905305;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20188314	20197100	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19239_ch_T0000474;gene_id=NA19239_ch_G0000178;Parent=NA19239_ch_T0000474;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:NA19239_ch_T0000474:1;Name=LOC124905305;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20197101	20197235	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19239_ch_T0000474;gene_id=NA19239_ch_G0000178;Parent=NA19239_ch_T0000474;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:NA19239_ch_T0000474:2;Name=LOC124905305;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20197236	20198950	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19239_ch_T0000474;gene_id=NA19239_ch_G0000178;Parent=NA19239_ch_T0000474;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:NA19239_ch_T0000474:2;Name=LOC124905305;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20198951	20199154	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19239_ch_T0000474;gene_id=NA19239_ch_G0000178;Parent=NA19239_ch_T0000474;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:NA19239_ch_T0000474:3;Name=LOC124905305;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20199155	20201516	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19239_ch_T0000474;gene_id=NA19239_ch_G0000178;Parent=NA19239_ch_T0000474;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:NA19239_ch_T0000474:3;Name=LOC124905305;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20201517	20201618	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19239_ch_T0000474;gene_id=NA19239_ch_G0000178;Parent=NA19239_ch_T0000474;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:NA19239_ch_T0000474:4;Name=LOC124905305;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20201619	20202276	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19239_ch_T0000474;gene_id=NA19239_ch_G0000178;Parent=NA19239_ch_T0000474;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:NA19239_ch_T0000474:4;Name=LOC124905305;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20202277	20202439	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19239_ch_T0000474;gene_id=NA19239_ch_G0000178;Parent=NA19239_ch_T0000474;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:NA19239_ch_T0000474:5;Name=LOC124905305;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20202440	20204840	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19239_ch_T0000474;gene_id=NA19239_ch_G0000178;Parent=NA19239_ch_T0000474;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:NA19239_ch_T0000474:5;Name=LOC124905305;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20204841	20204919	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19239_ch_T0000474;gene_id=NA19239_ch_G0000178;Parent=NA19239_ch_T0000474;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:NA19239_ch_T0000474:6;Name=LOC124905305;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	20202250	20202411	.	-	.	source_gene_common_name=LOC124905307;source_gene=hg002_chrY_paternal_422;gene_id=NA19239_ch_G0000179;gene_biotype=snRNA;gene_name=LOC124905307;gene_sources=liftoff;ID=NA19239_ch_G0000179;Name=LOC124905307
NA19239_chrY	CAT	transcript	20202250	20202411	1000	-	.	source_transcript=hg002_chrY_paternal_422.1;source_transcript_name=hg002_chrY_paternal_422.1;source_gene=hg002_chrY_paternal_422;source_gene_biotype=snRNA;original_gene_id=hg002_chrY_paternal_422;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=hg002_chrY_paternal_422.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_422.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905307;transcript_id=NA19239_ch_T0000475;gene_id=NA19239_ch_G0000179;Parent=NA19239_ch_G0000179;transcript_name=hg002_chrY_paternal_422.1;gene_name=LOC124905307;ID=NA19239_ch_T0000475;Name=LOC124905307
NA19239_chrY	CAT	exon	20202250	20202411	.	-	.	source_transcript=hg002_chrY_paternal_422.1;source_transcript_name=hg002_chrY_paternal_422.1;source_gene=hg002_chrY_paternal_422;source_gene_biotype=snRNA;original_gene_id=hg002_chrY_paternal_422;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=hg002_chrY_paternal_422.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_422.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905307;transcript_id=NA19239_ch_T0000475;gene_id=NA19239_ch_G0000179;Parent=NA19239_ch_T0000475;transcript_name=hg002_chrY_paternal_422.1;gene_name=LOC124905307;ID=exon:NA19239_ch_T0000475:0;Name=LOC124905307;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	20241056	20446105	.	-	.	source_gene_common_name=TTTY14;source_gene=hg002_chrY_paternal_425;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;gene_id=NA19239_ch_G0000180;gene_biotype=lncRNA;gene_name=TTTY14;gene_sources=liftoff;ID=NA19239_ch_G0000180;Name=TTTY14
NA19239_chrY	CAT	transcript	20241056	20444561	1000	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=NA19239_ch_T0000476;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_G0000180;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=NA19239_ch_T0000476;Name=TTTY14
NA19239_chrY	CAT	exon	20241056	20241389	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=NA19239_ch_T0000476;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000476;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19239_ch_T0000476:0;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20241390	20245622	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=NA19239_ch_T0000476;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000476;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19239_ch_T0000476:0;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20245623	20245760	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=NA19239_ch_T0000476;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000476;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19239_ch_T0000476:1;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20245761	20280928	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=NA19239_ch_T0000476;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000476;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19239_ch_T0000476:1;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20280929	20281043	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=NA19239_ch_T0000476;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000476;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19239_ch_T0000476:2;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20281044	20437281	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=NA19239_ch_T0000476;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000476;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19239_ch_T0000476:2;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20437282	20437356	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=NA19239_ch_T0000476;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000476;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19239_ch_T0000476:3;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20437357	20444498	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=NA19239_ch_T0000476;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000476;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19239_ch_T0000476:3;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20444499	20444561	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=NA19239_ch_T0000476;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000476;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19239_ch_T0000476:4;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	20241056	20444587	1000	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=NA19239_ch_T0000477;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_G0000180;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=NA19239_ch_T0000477;Name=TTTY14
NA19239_chrY	CAT	exon	20241056	20241389	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=NA19239_ch_T0000477;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000477;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19239_ch_T0000477:0;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20241390	20245622	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=NA19239_ch_T0000477;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000477;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19239_ch_T0000477:0;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20245623	20245760	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=NA19239_ch_T0000477;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000477;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19239_ch_T0000477:1;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20245761	20442056	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=NA19239_ch_T0000477;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000477;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19239_ch_T0000477:1;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20442057	20442119	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=NA19239_ch_T0000477;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000477;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19239_ch_T0000477:2;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20442120	20444498	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=NA19239_ch_T0000477;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000477;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19239_ch_T0000477:2;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20444499	20444587	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=NA19239_ch_T0000477;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000477;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19239_ch_T0000477:3;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	20241056	20446105	1000	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=NA19239_ch_T0000478;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_G0000180;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=NA19239_ch_T0000478;Name=TTTY14
NA19239_chrY	CAT	exon	20241056	20241389	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=NA19239_ch_T0000478;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000478;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19239_ch_T0000478:0;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20241390	20301301	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=NA19239_ch_T0000478;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000478;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19239_ch_T0000478:0;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20301302	20301400	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=NA19239_ch_T0000478;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000478;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19239_ch_T0000478:1;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20301401	20301915	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=NA19239_ch_T0000478;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000478;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19239_ch_T0000478:1;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20301916	20302034	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=NA19239_ch_T0000478;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000478;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19239_ch_T0000478:2;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20302035	20437281	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=NA19239_ch_T0000478;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000478;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19239_ch_T0000478:2;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20437282	20437356	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=NA19239_ch_T0000478;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000478;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19239_ch_T0000478:3;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20437357	20445602	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=NA19239_ch_T0000478;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000478;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19239_ch_T0000478:3;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20445603	20446105	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=NA19239_ch_T0000478;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000478;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19239_ch_T0000478:4;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	20241056	20446105	1000	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=NA19239_ch_T0000479;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_G0000180;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=NA19239_ch_T0000479;Name=TTTY14
NA19239_chrY	CAT	exon	20241056	20241389	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=NA19239_ch_T0000479;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000479;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19239_ch_T0000479:0;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20241390	20245622	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=NA19239_ch_T0000479;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000479;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19239_ch_T0000479:0;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20245623	20245760	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=NA19239_ch_T0000479;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000479;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19239_ch_T0000479:1;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20245761	20437281	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=NA19239_ch_T0000479;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000479;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19239_ch_T0000479:1;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20437282	20437356	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=NA19239_ch_T0000479;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000479;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19239_ch_T0000479:2;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20437357	20445602	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=NA19239_ch_T0000479;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000479;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19239_ch_T0000479:2;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20445603	20446105	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=NA19239_ch_T0000479;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000479;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19239_ch_T0000479:3;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	20241056	20446105	1000	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=NA19239_ch_T0000480;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_G0000180;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=NA19239_ch_T0000480;Name=TTTY14
NA19239_chrY	CAT	exon	20241056	20241389	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=NA19239_ch_T0000480;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000480;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19239_ch_T0000480:0;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20241390	20245622	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=NA19239_ch_T0000480;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000480;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19239_ch_T0000480:0;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20245623	20245760	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=NA19239_ch_T0000480;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000480;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19239_ch_T0000480:1;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20245761	20445602	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=NA19239_ch_T0000480;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000480;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19239_ch_T0000480:1;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20445603	20446105	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=NA19239_ch_T0000480;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000480;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19239_ch_T0000480:2;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	20300566	20444587	1000	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=NA19239_ch_T0000481;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_G0000180;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=NA19239_ch_T0000481;Name=TTTY14
NA19239_chrY	CAT	exon	20300566	20301400	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=NA19239_ch_T0000481;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000481;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19239_ch_T0000481:0;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20301401	20413094	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=NA19239_ch_T0000481;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000481;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19239_ch_T0000481:0;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20413095	20413248	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=NA19239_ch_T0000481;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000481;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19239_ch_T0000481:1;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20413249	20413794	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=NA19239_ch_T0000481;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000481;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19239_ch_T0000481:1;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20413795	20413844	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=NA19239_ch_T0000481;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000481;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19239_ch_T0000481:2;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20413845	20437281	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=NA19239_ch_T0000481;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000481;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19239_ch_T0000481:2;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20437282	20437356	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=NA19239_ch_T0000481;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000481;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19239_ch_T0000481:3;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20437357	20444498	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=NA19239_ch_T0000481;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000481;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19239_ch_T0000481:3;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20444499	20444587	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=NA19239_ch_T0000481;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000481;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19239_ch_T0000481:4;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	20301010	20444561	1000	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=NA19239_ch_T0000482;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_G0000180;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=NA19239_ch_T0000482;Name=TTTY14
NA19239_chrY	CAT	exon	20301010	20301400	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=NA19239_ch_T0000482;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000482;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19239_ch_T0000482:0;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20301401	20437281	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=NA19239_ch_T0000482;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000482;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19239_ch_T0000482:0;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20437282	20437356	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=NA19239_ch_T0000482;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000482;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19239_ch_T0000482:1;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20437357	20444498	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=NA19239_ch_T0000482;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000482;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19239_ch_T0000482:1;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20444499	20444561	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=NA19239_ch_T0000482;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000482;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19239_ch_T0000482:2;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	20301010	20446105	1000	-	.	source_transcript=hg002_chrY_paternal_425.8;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.8;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.8,hg002_chrY_paternal_425.8;transcript_id=NA19239_ch_T0000483;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_G0000180;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=NA19239_ch_T0000483;Name=TTTY14
NA19239_chrY	CAT	exon	20301010	20301400	.	-	.	source_transcript=hg002_chrY_paternal_425.8;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.8,hg002_chrY_paternal_425.8;transcript_id=NA19239_ch_T0000483;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000483;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19239_ch_T0000483:0;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20301401	20445602	.	-	.	source_transcript=hg002_chrY_paternal_425.8;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.8,hg002_chrY_paternal_425.8;transcript_id=NA19239_ch_T0000483;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000483;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19239_ch_T0000483:0;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20445603	20446105	.	-	.	source_transcript=hg002_chrY_paternal_425.8;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.8,hg002_chrY_paternal_425.8;transcript_id=NA19239_ch_T0000483;gene_id=NA19239_ch_G0000180;Parent=NA19239_ch_T0000483;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19239_ch_T0000483:1;Name=TTTY14;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	20448414	20457436	.	+	.	source_gene_common_name=LOC124905306;source_gene=hg002_chrY_paternal_429;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;gene_id=NA19239_ch_G0000181;gene_biotype=lncRNA;gene_name=LOC124905306;gene_sources=liftoff;ID=NA19239_ch_G0000181;Name=LOC124905306
NA19239_chrY	CAT	transcript	20448414	20457436	1000	+	.	source_transcript=hg002_chrY_paternal_429.1;source_transcript_name=hg002_chrY_paternal_429.1;source_gene=hg002_chrY_paternal_429;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_429;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_429.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_429.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905306;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;transcript_id=NA19239_ch_T0000484;gene_id=NA19239_ch_G0000181;Parent=NA19239_ch_G0000181;transcript_name=hg002_chrY_paternal_429.1;gene_name=LOC124905306;ID=NA19239_ch_T0000484;Name=LOC124905306
NA19239_chrY	CAT	exon	20448414	20449283	.	+	.	source_transcript=hg002_chrY_paternal_429.1;source_transcript_name=hg002_chrY_paternal_429.1;source_gene=hg002_chrY_paternal_429;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_429;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_429.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905306;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;transcript_id=NA19239_ch_T0000484;gene_id=NA19239_ch_G0000181;Parent=NA19239_ch_T0000484;transcript_name=hg002_chrY_paternal_429.1;gene_name=LOC124905306;ID=exon:NA19239_ch_T0000484:0;Name=LOC124905306;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20449284	20455057	.	+	.	source_transcript=hg002_chrY_paternal_429.1;source_transcript_name=hg002_chrY_paternal_429.1;source_gene=hg002_chrY_paternal_429;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_429;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_429.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905306;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;transcript_id=NA19239_ch_T0000484;gene_id=NA19239_ch_G0000181;Parent=NA19239_ch_T0000484;transcript_name=hg002_chrY_paternal_429.1;gene_name=LOC124905306;ID=intron:NA19239_ch_T0000484:0;Name=LOC124905306;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20455058	20457436	.	+	.	source_transcript=hg002_chrY_paternal_429.1;source_transcript_name=hg002_chrY_paternal_429.1;source_gene=hg002_chrY_paternal_429;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_429;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_429.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905306;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;transcript_id=NA19239_ch_T0000484;gene_id=NA19239_ch_G0000181;Parent=NA19239_ch_T0000484;transcript_name=hg002_chrY_paternal_429.1;gene_name=LOC124905306;ID=exon:NA19239_ch_T0000484:1;Name=LOC124905306;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	20824398	20872118	.	-	.	source_gene_common_name=BCORP1;source_gene=hg002_chrY_paternal_431;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;gene_id=NA19239_ch_G0000182;gene_biotype=transcribed_pseudogene;gene_name=BCORP1;gene_sources=liftoff;ID=NA19239_ch_G0000182;Name=BCORP1
NA19239_chrY	CAT	transcript	20824398	20872118	1000	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=NA19239_ch_T0000485;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_G0000182;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=NA19239_ch_T0000485;Name=BCORP1
NA19239_chrY	CAT	exon	20824398	20825835	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=NA19239_ch_T0000485;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_T0000485;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19239_ch_T0000485:0;Name=BCORP1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20825836	20827889	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=NA19239_ch_T0000485;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_T0000485;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:NA19239_ch_T0000485:0;Name=BCORP1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20827890	20828045	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=NA19239_ch_T0000485;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_T0000485;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19239_ch_T0000485:1;Name=BCORP1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20828046	20828254	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=NA19239_ch_T0000485;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_T0000485;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:NA19239_ch_T0000485:1;Name=BCORP1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20828255	20828332	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=NA19239_ch_T0000485;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_T0000485;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19239_ch_T0000485:2;Name=BCORP1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20828333	20834070	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=NA19239_ch_T0000485;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_T0000485;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:NA19239_ch_T0000485:2;Name=BCORP1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20834071	20834192	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=NA19239_ch_T0000485;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_T0000485;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19239_ch_T0000485:3;Name=BCORP1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20834193	20835420	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=NA19239_ch_T0000485;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_T0000485;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:NA19239_ch_T0000485:3;Name=BCORP1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20835421	20836339	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=NA19239_ch_T0000485;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_T0000485;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19239_ch_T0000485:4;Name=BCORP1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20836340	20842869	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=NA19239_ch_T0000485;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_T0000485;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:NA19239_ch_T0000485:4;Name=BCORP1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20842870	20843109	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=NA19239_ch_T0000485;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_T0000485;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19239_ch_T0000485:5;Name=BCORP1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20843110	20843604	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=NA19239_ch_T0000485;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_T0000485;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:NA19239_ch_T0000485:5;Name=BCORP1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20843605	20843868	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=NA19239_ch_T0000485;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_T0000485;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19239_ch_T0000485:6;Name=BCORP1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20843869	20849133	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=NA19239_ch_T0000485;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_T0000485;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:NA19239_ch_T0000485:6;Name=BCORP1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20849134	20849259	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=NA19239_ch_T0000485;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_T0000485;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19239_ch_T0000485:7;Name=BCORP1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20849260	20871996	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=NA19239_ch_T0000485;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_T0000485;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:NA19239_ch_T0000485:7;Name=BCORP1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20871997	20872118	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=NA19239_ch_T0000485;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_T0000485;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19239_ch_T0000485:8;Name=BCORP1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	20824398	20872118	1000	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19239_ch_T0000486;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_G0000182;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=NA19239_ch_T0000486;Name=BCORP1
NA19239_chrY	CAT	exon	20824398	20825835	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19239_ch_T0000486;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_T0000486;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19239_ch_T0000486:0;Name=BCORP1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20825836	20826027	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19239_ch_T0000486;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_T0000486;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:NA19239_ch_T0000486:0;Name=BCORP1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20826028	20826088	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19239_ch_T0000486;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_T0000486;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19239_ch_T0000486:1;Name=BCORP1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20826089	20827889	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19239_ch_T0000486;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_T0000486;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:NA19239_ch_T0000486:1;Name=BCORP1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20827890	20828045	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19239_ch_T0000486;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_T0000486;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19239_ch_T0000486:2;Name=BCORP1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20828046	20828254	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19239_ch_T0000486;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_T0000486;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:NA19239_ch_T0000486:2;Name=BCORP1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20828255	20828332	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19239_ch_T0000486;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_T0000486;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19239_ch_T0000486:3;Name=BCORP1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20828333	20828924	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19239_ch_T0000486;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_T0000486;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:NA19239_ch_T0000486:3;Name=BCORP1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20828925	20829070	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19239_ch_T0000486;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_T0000486;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19239_ch_T0000486:4;Name=BCORP1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20829071	20834070	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19239_ch_T0000486;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_T0000486;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:NA19239_ch_T0000486:4;Name=BCORP1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20834071	20834192	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19239_ch_T0000486;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_T0000486;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19239_ch_T0000486:5;Name=BCORP1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20834193	20835420	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19239_ch_T0000486;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_T0000486;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:NA19239_ch_T0000486:5;Name=BCORP1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20835421	20836339	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19239_ch_T0000486;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_T0000486;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19239_ch_T0000486:6;Name=BCORP1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20836340	20842869	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19239_ch_T0000486;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_T0000486;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:NA19239_ch_T0000486:6;Name=BCORP1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20842870	20843109	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19239_ch_T0000486;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_T0000486;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19239_ch_T0000486:7;Name=BCORP1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20843110	20843604	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19239_ch_T0000486;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_T0000486;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:NA19239_ch_T0000486:7;Name=BCORP1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20843605	20843868	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19239_ch_T0000486;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_T0000486;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19239_ch_T0000486:8;Name=BCORP1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20843869	20849133	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19239_ch_T0000486;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_T0000486;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:NA19239_ch_T0000486:8;Name=BCORP1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20849134	20849259	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19239_ch_T0000486;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_T0000486;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19239_ch_T0000486:9;Name=BCORP1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20849260	20871996	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19239_ch_T0000486;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_T0000486;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:NA19239_ch_T0000486:9;Name=BCORP1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20871997	20872118	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19239_ch_T0000486;gene_id=NA19239_ch_G0000182;Parent=NA19239_ch_T0000486;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19239_ch_T0000486:10;Name=BCORP1;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	20850581	20852420	.	-	.	source_gene_common_name=LOC102723934;source_gene=hg002_chrY_paternal_432;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;gene_id=NA19239_ch_G0000183;gene_biotype=protein_coding;gene_name=LOC102723934;gene_sources=liftoff,augTM;ID=NA19239_ch_G0000183;Name=LOC102723934
NA19239_chrY	CAT	transcript	20850581	20852420	100	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000487;gene_id=NA19239_ch_G0000183;Parent=NA19239_ch_G0000183;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=NA19239_ch_T0000487;Name=LOC102723934
NA19239_chrY	CAT	exon	20850581	20850969	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000487;gene_id=NA19239_ch_G0000183;Parent=NA19239_ch_T0000487;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=exon:NA19239_ch_T0000487:0;Name=LOC102723934;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	20850581	20850969	.	-	2	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000487;gene_id=NA19239_ch_G0000183;Parent=NA19239_ch_T0000487;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=CDS:NA19239_ch_T0000487:0;Name=LOC102723934;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	20850581	20850583	.	-	0	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000487;gene_id=NA19239_ch_G0000183;Parent=NA19239_ch_T0000487;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=stop_codon:NA19239_ch_T0000487;Name=LOC102723934;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20850970	20851281	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000487;gene_id=NA19239_ch_G0000183;Parent=NA19239_ch_T0000487;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=intron:NA19239_ch_T0000487:0;Name=LOC102723934;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20851282	20851293	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000487;gene_id=NA19239_ch_G0000183;Parent=NA19239_ch_T0000487;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=exon:NA19239_ch_T0000487:1;Name=LOC102723934;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	20851282	20851293	.	-	2	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000487;gene_id=NA19239_ch_G0000183;Parent=NA19239_ch_T0000487;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=CDS:NA19239_ch_T0000487:1;Name=LOC102723934;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20851294	20851373	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000487;gene_id=NA19239_ch_G0000183;Parent=NA19239_ch_T0000487;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=intron:NA19239_ch_T0000487:1;Name=LOC102723934;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20851374	20852420	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000487;gene_id=NA19239_ch_G0000183;Parent=NA19239_ch_T0000487;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=exon:NA19239_ch_T0000487:2;Name=LOC102723934;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	20851374	20852397	.	-	0	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000487;gene_id=NA19239_ch_G0000183;Parent=NA19239_ch_T0000487;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=CDS:NA19239_ch_T0000487:2;Name=LOC102723934;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	20852395	20852397	.	-	0	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000487;gene_id=NA19239_ch_G0000183;Parent=NA19239_ch_T0000487;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=start_codon:NA19239_ch_T0000487;Name=LOC102723934;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	20922863	20935971	.	-	.	source_gene_common_name=LOC105377223;source_gene=hg002_chrY_paternal_433;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;gene_id=NA19239_ch_G0000184;gene_biotype=lncRNA;gene_name=LOC105377223;gene_sources=liftoff;ID=NA19239_ch_G0000184;Name=LOC105377223
NA19239_chrY	CAT	transcript	20922863	20935971	1000	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=NA19239_ch_T0000488;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_G0000184;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=NA19239_ch_T0000488;Name=LOC105377223
NA19239_chrY	CAT	exon	20922863	20925774	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=NA19239_ch_T0000488;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000488;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19239_ch_T0000488:0;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20925775	20926191	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=NA19239_ch_T0000488;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000488;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:NA19239_ch_T0000488:0;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20926192	20926251	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=NA19239_ch_T0000488;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000488;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19239_ch_T0000488:1;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20926252	20926985	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=NA19239_ch_T0000488;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000488;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:NA19239_ch_T0000488:1;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20926986	20927102	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=NA19239_ch_T0000488;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000488;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19239_ch_T0000488:2;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20927103	20935943	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=NA19239_ch_T0000488;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000488;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:NA19239_ch_T0000488:2;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20935944	20935971	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=NA19239_ch_T0000488;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000488;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19239_ch_T0000488:3;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	20922863	20935971	1000	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=NA19239_ch_T0000489;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_G0000184;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=NA19239_ch_T0000489;Name=LOC105377223
NA19239_chrY	CAT	exon	20922863	20925774	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=NA19239_ch_T0000489;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000489;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19239_ch_T0000489:0;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20925775	20926191	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=NA19239_ch_T0000489;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000489;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:NA19239_ch_T0000489:0;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20926192	20926251	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=NA19239_ch_T0000489;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000489;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19239_ch_T0000489:1;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20926252	20927001	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=NA19239_ch_T0000489;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000489;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:NA19239_ch_T0000489:1;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20927002	20927102	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=NA19239_ch_T0000489;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000489;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19239_ch_T0000489:2;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20927103	20935943	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=NA19239_ch_T0000489;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000489;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:NA19239_ch_T0000489:2;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20935944	20935971	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=NA19239_ch_T0000489;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000489;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19239_ch_T0000489:3;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	20922863	20935971	1000	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=NA19239_ch_T0000490;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_G0000184;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=NA19239_ch_T0000490;Name=LOC105377223
NA19239_chrY	CAT	exon	20922863	20925774	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=NA19239_ch_T0000490;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000490;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19239_ch_T0000490:0;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20925775	20926191	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=NA19239_ch_T0000490;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000490;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:NA19239_ch_T0000490:0;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20926192	20926251	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=NA19239_ch_T0000490;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000490;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19239_ch_T0000490:1;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20926252	20926985	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=NA19239_ch_T0000490;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000490;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:NA19239_ch_T0000490:1;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20926986	20927102	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=NA19239_ch_T0000490;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000490;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19239_ch_T0000490:2;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20927103	20928301	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=NA19239_ch_T0000490;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000490;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:NA19239_ch_T0000490:2;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20928302	20935971	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=NA19239_ch_T0000490;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000490;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19239_ch_T0000490:3;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	20922863	20935971	1000	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=NA19239_ch_T0000491;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_G0000184;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=NA19239_ch_T0000491;Name=LOC105377223
NA19239_chrY	CAT	exon	20922863	20924518	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=NA19239_ch_T0000491;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000491;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19239_ch_T0000491:0;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20924519	20926191	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=NA19239_ch_T0000491;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000491;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:NA19239_ch_T0000491:0;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20926192	20926251	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=NA19239_ch_T0000491;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000491;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19239_ch_T0000491:1;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20926252	20927001	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=NA19239_ch_T0000491;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000491;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:NA19239_ch_T0000491:1;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20927002	20927102	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=NA19239_ch_T0000491;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000491;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19239_ch_T0000491:2;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20927103	20928301	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=NA19239_ch_T0000491;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000491;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:NA19239_ch_T0000491:2;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20928302	20935971	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=NA19239_ch_T0000491;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000491;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19239_ch_T0000491:3;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	20922863	20935971	1000	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=NA19239_ch_T0000492;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_G0000184;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=NA19239_ch_T0000492;Name=LOC105377223
NA19239_chrY	CAT	exon	20922863	20924518	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=NA19239_ch_T0000492;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000492;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19239_ch_T0000492:0;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20924519	20926191	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=NA19239_ch_T0000492;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000492;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:NA19239_ch_T0000492:0;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20926192	20926251	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=NA19239_ch_T0000492;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000492;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19239_ch_T0000492:1;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20926252	20926985	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=NA19239_ch_T0000492;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000492;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:NA19239_ch_T0000492:1;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20926986	20927102	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=NA19239_ch_T0000492;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000492;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19239_ch_T0000492:2;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20927103	20935943	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=NA19239_ch_T0000492;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000492;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:NA19239_ch_T0000492:2;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20935944	20935971	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=NA19239_ch_T0000492;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000492;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19239_ch_T0000492:3;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	20922863	20935971	1000	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=NA19239_ch_T0000493;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_G0000184;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=NA19239_ch_T0000493;Name=LOC105377223
NA19239_chrY	CAT	exon	20922863	20926251	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=NA19239_ch_T0000493;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000493;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19239_ch_T0000493:0;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20926252	20926985	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=NA19239_ch_T0000493;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000493;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:NA19239_ch_T0000493:0;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20926986	20927102	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=NA19239_ch_T0000493;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000493;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19239_ch_T0000493:1;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20927103	20928301	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=NA19239_ch_T0000493;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000493;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:NA19239_ch_T0000493:1;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20928302	20935971	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=NA19239_ch_T0000493;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000493;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19239_ch_T0000493:2;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	20922863	20935971	1000	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=NA19239_ch_T0000494;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_G0000184;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=NA19239_ch_T0000494;Name=LOC105377223
NA19239_chrY	CAT	exon	20922863	20926251	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=NA19239_ch_T0000494;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000494;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19239_ch_T0000494:0;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20926252	20926985	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=NA19239_ch_T0000494;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000494;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:NA19239_ch_T0000494:0;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20926986	20927102	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=NA19239_ch_T0000494;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000494;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19239_ch_T0000494:1;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20927103	20935943	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=NA19239_ch_T0000494;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000494;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:NA19239_ch_T0000494:1;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20935944	20935971	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=NA19239_ch_T0000494;gene_id=NA19239_ch_G0000184;Parent=NA19239_ch_T0000494;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19239_ch_T0000494:2;Name=LOC105377223;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	20936320	20976140	.	+	.	source_gene_common_name=TXLNGY;source_gene=hg002_chrY_paternal_434;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;gene_id=NA19239_ch_G0000185;gene_biotype=transcribed_pseudogene;gene_name=TXLNGY;gene_sources=liftoff;ID=NA19239_ch_G0000185;Name=TXLNGY
NA19239_chrY	CAT	transcript	20936320	20959385	1000	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=NA19239_ch_T0000495;gene_id=NA19239_ch_G0000185;Parent=NA19239_ch_G0000185;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=NA19239_ch_T0000495;Name=TXLNGY
NA19239_chrY	CAT	exon	20936320	20936444	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=NA19239_ch_T0000495;gene_id=NA19239_ch_G0000185;Parent=NA19239_ch_T0000495;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:NA19239_ch_T0000495:0;Name=TXLNGY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20936445	20956171	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=NA19239_ch_T0000495;gene_id=NA19239_ch_G0000185;Parent=NA19239_ch_T0000495;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:NA19239_ch_T0000495:0;Name=TXLNGY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20956172	20956469	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=NA19239_ch_T0000495;gene_id=NA19239_ch_G0000185;Parent=NA19239_ch_T0000495;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:NA19239_ch_T0000495:1;Name=TXLNGY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20956470	20958482	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=NA19239_ch_T0000495;gene_id=NA19239_ch_G0000185;Parent=NA19239_ch_T0000495;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:NA19239_ch_T0000495:1;Name=TXLNGY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20958483	20958574	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=NA19239_ch_T0000495;gene_id=NA19239_ch_G0000185;Parent=NA19239_ch_T0000495;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:NA19239_ch_T0000495:2;Name=TXLNGY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20958575	20959044	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=NA19239_ch_T0000495;gene_id=NA19239_ch_G0000185;Parent=NA19239_ch_T0000495;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:NA19239_ch_T0000495:2;Name=TXLNGY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20959045	20959385	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=NA19239_ch_T0000495;gene_id=NA19239_ch_G0000185;Parent=NA19239_ch_T0000495;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:NA19239_ch_T0000495:3;Name=TXLNGY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	20936320	20976140	1000	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19239_ch_T0000496;gene_id=NA19239_ch_G0000185;Parent=NA19239_ch_G0000185;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=NA19239_ch_T0000496;Name=TXLNGY
NA19239_chrY	CAT	exon	20936320	20936444	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19239_ch_T0000496;gene_id=NA19239_ch_G0000185;Parent=NA19239_ch_T0000496;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:NA19239_ch_T0000496:0;Name=TXLNGY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20936445	20956171	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19239_ch_T0000496;gene_id=NA19239_ch_G0000185;Parent=NA19239_ch_T0000496;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:NA19239_ch_T0000496:0;Name=TXLNGY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20956172	20956469	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19239_ch_T0000496;gene_id=NA19239_ch_G0000185;Parent=NA19239_ch_T0000496;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:NA19239_ch_T0000496:1;Name=TXLNGY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20956470	20958482	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19239_ch_T0000496;gene_id=NA19239_ch_G0000185;Parent=NA19239_ch_T0000496;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:NA19239_ch_T0000496:1;Name=TXLNGY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20958483	20958574	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19239_ch_T0000496;gene_id=NA19239_ch_G0000185;Parent=NA19239_ch_T0000496;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:NA19239_ch_T0000496:2;Name=TXLNGY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20958575	20960741	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19239_ch_T0000496;gene_id=NA19239_ch_G0000185;Parent=NA19239_ch_T0000496;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:NA19239_ch_T0000496:2;Name=TXLNGY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20960742	20960921	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19239_ch_T0000496;gene_id=NA19239_ch_G0000185;Parent=NA19239_ch_T0000496;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:NA19239_ch_T0000496:3;Name=TXLNGY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20960922	20962360	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19239_ch_T0000496;gene_id=NA19239_ch_G0000185;Parent=NA19239_ch_T0000496;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:NA19239_ch_T0000496:3;Name=TXLNGY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20962361	20962555	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19239_ch_T0000496;gene_id=NA19239_ch_G0000185;Parent=NA19239_ch_T0000496;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:NA19239_ch_T0000496:4;Name=TXLNGY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20962556	20964976	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19239_ch_T0000496;gene_id=NA19239_ch_G0000185;Parent=NA19239_ch_T0000496;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:NA19239_ch_T0000496:4;Name=TXLNGY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20964977	20965096	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19239_ch_T0000496;gene_id=NA19239_ch_G0000185;Parent=NA19239_ch_T0000496;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:NA19239_ch_T0000496:5;Name=TXLNGY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20965097	20966556	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19239_ch_T0000496;gene_id=NA19239_ch_G0000185;Parent=NA19239_ch_T0000496;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:NA19239_ch_T0000496:5;Name=TXLNGY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20966557	20966631	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19239_ch_T0000496;gene_id=NA19239_ch_G0000185;Parent=NA19239_ch_T0000496;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:NA19239_ch_T0000496:6;Name=TXLNGY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20966632	20968704	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19239_ch_T0000496;gene_id=NA19239_ch_G0000185;Parent=NA19239_ch_T0000496;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:NA19239_ch_T0000496:6;Name=TXLNGY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20968705	20968797	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19239_ch_T0000496;gene_id=NA19239_ch_G0000185;Parent=NA19239_ch_T0000496;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:NA19239_ch_T0000496:7;Name=TXLNGY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20968798	20971181	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19239_ch_T0000496;gene_id=NA19239_ch_G0000185;Parent=NA19239_ch_T0000496;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:NA19239_ch_T0000496:7;Name=TXLNGY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20971182	20971277	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19239_ch_T0000496;gene_id=NA19239_ch_G0000185;Parent=NA19239_ch_T0000496;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:NA19239_ch_T0000496:8;Name=TXLNGY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	20971278	20972762	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19239_ch_T0000496;gene_id=NA19239_ch_G0000185;Parent=NA19239_ch_T0000496;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:NA19239_ch_T0000496:8;Name=TXLNGY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	20972763	20976140	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19239_ch_T0000496;gene_id=NA19239_ch_G0000185;Parent=NA19239_ch_T0000496;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:NA19239_ch_T0000496:9;Name=TXLNGY;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	21072837	21113699	.	-	.	source_gene_common_name=KDM5D;source_gene=hg002_chrY_paternal_435;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;gene_id=NA19239_ch_G0000186;gene_biotype=protein_coding;gene_name=KDM5D;gene_sources=liftoff,augTM;ID=NA19239_ch_G0000186;Name=KDM5D
NA19239_chrY	CAT	transcript	21072837	21113699	100	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_G0000186;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=NA19239_ch_T0000497;Name=KDM5D
NA19239_chrY	CAT	exon	21072837	21075317	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000497:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21074967	21075317	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000497:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	21074967	21074969	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:NA19239_ch_T0000497;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21075318	21075412	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000497:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21075413	21075612	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000497:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21075413	21075612	.	-	2	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000497:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21075613	21075765	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000497:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21075766	21075835	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000497:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21075766	21075835	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000497:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21075836	21076118	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000497:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21076119	21076718	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000497:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21076119	21076718	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000497:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21076719	21076905	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000497:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21076906	21077043	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000497:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21076906	21077043	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000497:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21077044	21077215	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000497:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21077216	21077395	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000497:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21077216	21077395	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000497:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21077396	21077846	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000497:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21077847	21077985	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000497:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21077847	21077985	.	-	1	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000497:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21077986	21078422	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000497:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21078423	21078781	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000497:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21078423	21078781	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000497:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21078782	21079347	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000497:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21079348	21079444	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000497:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21079348	21079444	.	-	1	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000497:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21079445	21084323	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000497:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21084324	21084471	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000497:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084324	21084471	.	-	2	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000497:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084472	21084586	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000497:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21084587	21084711	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000497:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084587	21084711	.	-	1	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000497:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084712	21084794	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000497:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21084795	21084976	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000497:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084795	21084976	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000497:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084977	21085250	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000497:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21085251	21085445	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000497:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21085251	21085445	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000497:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21085446	21085567	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000497:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21085568	21085687	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000497:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21085568	21085687	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000497:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21085688	21089844	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000497:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21089845	21090007	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000497:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21089845	21090007	.	-	1	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000497:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21090008	21090102	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000497:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21090103	21090284	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000497:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21090103	21090284	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000497:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21090285	21092313	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000497:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21092314	21092406	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000497:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21092314	21092406	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000497:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21092407	21100744	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000497:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21100745	21100903	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000497:17;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21100745	21100903	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000497:17;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21100904	21101018	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000497:17;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21101019	21101138	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000497:18;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21101019	21101138	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000497:18;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21101139	21101556	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000497:18;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21101557	21101715	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000497:19;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21101557	21101715	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000497:19;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21101716	21104324	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000497:19;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21104325	21104470	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000497:20;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21104325	21104470	.	-	2	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000497:20;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21104471	21104593	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000497:20;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21104594	21104723	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000497:21;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21104594	21104723	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000497:21;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21104724	21108500	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000497:21;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21108501	21108635	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000497:22;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21108501	21108635	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000497:22;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21108636	21110290	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000497:22;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21110291	21110461	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000497:23;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21110291	21110461	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000497:23;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21110462	21110707	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000497:23;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21110708	21110830	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000497:24;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21110708	21110830	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000497:24;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21110831	21112134	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000497:24;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21112135	21112212	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000497:25;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21112135	21112212	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000497:25;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21112213	21113357	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000497:25;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21113358	21113526	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000497:26;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21113358	21113507	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000497:26;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	21113505	21113507	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:NA19239_ch_T0000497;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21113527	21113643	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000497:26;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21113644	21113699	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000497;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000497;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000497:27;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	21072837	21113699	100	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_G0000186;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=NA19239_ch_T0000498;Name=KDM5D
NA19239_chrY	CAT	exon	21072837	21075317	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000498:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21074967	21075317	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000498:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	21074967	21074969	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:NA19239_ch_T0000498;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21075318	21075412	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000498:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21075413	21075612	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000498:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21075413	21075612	.	-	2	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000498:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21075613	21075765	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000498:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21075766	21075835	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000498:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21075766	21075835	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000498:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21075836	21076118	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000498:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21076119	21076718	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000498:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21076119	21076718	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000498:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21076719	21076905	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000498:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21076906	21077043	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000498:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21076906	21077043	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000498:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21077044	21077293	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000498:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21077294	21077395	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000498:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21077294	21077395	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000498:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21077396	21077846	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000498:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21077847	21077985	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000498:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21077847	21077985	.	-	1	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000498:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21077986	21078422	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000498:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21078423	21078550	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000498:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21078423	21078550	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000498:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21078551	21079347	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000498:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21079348	21079444	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000498:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21079348	21079444	.	-	1	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000498:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21079445	21084323	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000498:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21084324	21084471	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000498:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084324	21084471	.	-	2	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000498:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084472	21084586	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000498:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21084587	21084711	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000498:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084587	21084711	.	-	1	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000498:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084712	21084794	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000498:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21084795	21084976	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000498:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084795	21084976	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000498:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084977	21085250	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000498:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21085251	21085445	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000498:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21085251	21085445	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000498:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21085446	21085567	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000498:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21085568	21085687	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000498:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21085568	21085687	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000498:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21085688	21089844	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000498:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21089845	21090007	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000498:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21089845	21090007	.	-	1	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000498:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21090008	21090102	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000498:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21090103	21090284	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000498:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21090103	21090284	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000498:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21090285	21100744	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000498:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21100745	21100903	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000498:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21100745	21100903	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000498:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21100904	21101018	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000498:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21101019	21101138	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000498:17;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21101019	21101138	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000498:17;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21101139	21101556	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000498:17;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21101557	21101715	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000498:18;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21101557	21101715	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000498:18;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21101716	21104324	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000498:18;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21104325	21104470	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000498:19;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21104325	21104470	.	-	2	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000498:19;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21104471	21104593	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000498:19;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21104594	21104723	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000498:20;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21104594	21104723	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000498:20;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21104724	21108500	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000498:20;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21108501	21108635	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000498:21;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21108501	21108635	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000498:21;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21108636	21110290	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000498:21;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21110291	21110461	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000498:22;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21110291	21110461	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000498:22;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21110462	21110707	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000498:22;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21110708	21110830	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000498:23;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21110708	21110830	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000498:23;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21110831	21112134	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000498:23;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21112135	21112212	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000498:24;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21112135	21112212	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000498:24;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21112213	21113357	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000498:24;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21113358	21113526	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000498:25;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21113358	21113507	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000498:25;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	21113505	21113507	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:NA19239_ch_T0000498;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21113527	21113643	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000498:25;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21113644	21113699	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000498;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000498;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000498:26;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	21072837	21113699	100	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_G0000186;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=NA19239_ch_T0000499;Name=KDM5D
NA19239_chrY	CAT	exon	21072837	21075317	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000499:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21074967	21075317	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000499:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	21074967	21074969	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:NA19239_ch_T0000499;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21075318	21075412	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000499:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21075413	21075612	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000499:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21075413	21075612	.	-	2	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000499:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21075613	21075765	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000499:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21075766	21075835	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000499:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21075766	21075835	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000499:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21075836	21076118	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000499:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21076119	21076718	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000499:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21076119	21076718	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000499:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21076719	21076905	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000499:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21076906	21077043	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000499:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21076906	21077043	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000499:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21077044	21077215	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000499:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21077216	21077395	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000499:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21077216	21077395	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000499:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21077396	21077846	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000499:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21077847	21077985	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000499:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21077847	21077985	.	-	1	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000499:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21077986	21078422	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000499:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21078423	21078550	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000499:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21078423	21078550	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000499:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21078551	21079347	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000499:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21079348	21079444	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000499:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21079348	21079444	.	-	1	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000499:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21079445	21084323	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000499:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21084324	21084471	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000499:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084324	21084471	.	-	2	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000499:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084472	21084586	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000499:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21084587	21084711	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000499:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084587	21084711	.	-	1	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000499:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084712	21084794	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000499:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21084795	21084976	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000499:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084795	21084976	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000499:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084977	21085250	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000499:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21085251	21085445	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000499:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21085251	21085445	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000499:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21085446	21085567	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000499:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21085568	21085687	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000499:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21085568	21085687	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000499:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21085688	21089844	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000499:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21089845	21090007	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000499:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21089845	21090007	.	-	1	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000499:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21090008	21090102	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000499:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21090103	21090284	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000499:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21090103	21090284	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000499:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21090285	21100744	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000499:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21100745	21100903	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000499:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21100745	21100903	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000499:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21100904	21101018	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000499:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21101019	21101138	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000499:17;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21101019	21101138	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000499:17;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21101139	21101556	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000499:17;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21101557	21101715	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000499:18;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21101557	21101715	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000499:18;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21101716	21104324	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000499:18;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21104325	21104470	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000499:19;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21104325	21104470	.	-	2	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000499:19;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21104471	21104593	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000499:19;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21104594	21104723	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000499:20;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21104594	21104723	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000499:20;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21104724	21110290	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000499:20;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21110291	21110461	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000499:21;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21110291	21110461	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000499:21;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21110462	21110707	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000499:21;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21110708	21110830	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000499:22;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21110708	21110830	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000499:22;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21110831	21112134	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000499:22;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21112135	21112212	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000499:23;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21112135	21112212	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000499:23;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21112213	21113357	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000499:23;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21113358	21113526	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000499:24;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21113358	21113507	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000499:24;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	21113505	21113507	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:NA19239_ch_T0000499;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21113527	21113643	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000499:24;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21113644	21113699	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000499;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000499:25;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	21072837	21113699	100	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_G0000186;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=NA19239_ch_T0000500;Name=KDM5D
NA19239_chrY	CAT	exon	21072837	21075317	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000500:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21074967	21075317	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000500:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	21074967	21074969	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:NA19239_ch_T0000500;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21075318	21075412	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000500:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21075413	21075612	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000500:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21075413	21075612	.	-	2	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000500:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21075613	21075765	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000500:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21075766	21075835	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000500:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21075766	21075835	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000500:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21075836	21076118	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000500:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21076119	21076718	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000500:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21076119	21076718	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000500:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21076719	21076905	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000500:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21076906	21077043	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000500:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21076906	21077043	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000500:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21077044	21077293	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000500:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21077294	21077395	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000500:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21077294	21077395	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000500:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21077396	21077846	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000500:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21077847	21077985	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000500:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21077847	21077985	.	-	1	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000500:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21077986	21078422	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000500:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21078423	21078550	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000500:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21078423	21078550	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000500:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21078551	21079347	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000500:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21079348	21079444	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000500:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21079348	21079444	.	-	1	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000500:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21079445	21084323	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000500:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21084324	21084471	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000500:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084324	21084471	.	-	2	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000500:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084472	21084586	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000500:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21084587	21084711	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000500:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084587	21084711	.	-	1	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000500:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084712	21084794	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000500:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21084795	21084976	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000500:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084795	21084976	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000500:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084977	21085250	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000500:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21085251	21085445	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000500:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21085251	21085445	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000500:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21085446	21085567	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000500:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21085568	21085687	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000500:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21085568	21085687	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000500:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21085688	21089844	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000500:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21089845	21090007	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000500:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21089845	21090007	.	-	1	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000500:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21090008	21090102	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000500:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21090103	21090284	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000500:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21090103	21090284	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000500:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21090285	21100744	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000500:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21100745	21100903	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000500:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21100745	21100903	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000500:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21100904	21101018	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000500:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21101019	21101138	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000500:17;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21101019	21101138	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000500:17;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21101139	21101556	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000500:17;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21101557	21101715	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000500:18;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21101557	21101715	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000500:18;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21101716	21104324	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000500:18;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21104325	21104470	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000500:19;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21104325	21104470	.	-	2	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000500:19;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21104471	21104593	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000500:19;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21104594	21104723	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000500:20;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21104594	21104723	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000500:20;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21104724	21110290	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000500:20;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21110291	21110461	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000500:21;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21110291	21110461	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000500:21;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21110462	21110707	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000500:21;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21110708	21110830	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000500:22;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21110708	21110830	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000500:22;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21110831	21112134	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000500:22;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21112135	21112212	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000500:23;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21112135	21112212	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000500:23;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21112213	21113357	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000500:23;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21113358	21113526	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000500:24;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21113358	21113507	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000500:24;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	21113505	21113507	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:NA19239_ch_T0000500;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21113527	21113643	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000500:24;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21113644	21113699	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000500;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000500:25;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	21072837	21113699	100	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_G0000186;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=NA19239_ch_T0000501;Name=KDM5D
NA19239_chrY	CAT	exon	21072837	21075317	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000501:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21074967	21075317	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000501:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	21074967	21074969	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:NA19239_ch_T0000501;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21075318	21075412	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000501:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21075413	21075612	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000501:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21075413	21075612	.	-	2	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000501:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21075613	21075765	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000501:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21075766	21075835	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000501:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21075766	21075835	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000501:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21075836	21076118	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000501:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21076119	21076718	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000501:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21076119	21076718	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000501:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21076719	21076905	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000501:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21076906	21077043	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000501:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21076906	21077043	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000501:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21077044	21077215	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000501:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21077216	21077395	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000501:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21077216	21077395	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000501:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21077396	21077846	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000501:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21077847	21077985	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000501:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21077847	21077985	.	-	1	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000501:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21077986	21078422	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000501:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21078423	21078781	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000501:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21078423	21078781	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000501:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21078782	21079347	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000501:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21079348	21079444	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000501:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21079348	21079444	.	-	1	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000501:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21079445	21084323	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000501:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21084324	21084471	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000501:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084324	21084471	.	-	2	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000501:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084472	21084586	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000501:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21084587	21084711	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000501:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084587	21084711	.	-	1	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000501:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084712	21084794	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000501:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21084795	21084976	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000501:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084795	21084976	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000501:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084977	21085250	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000501:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21085251	21085445	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000501:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21085251	21085445	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000501:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21085446	21085567	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000501:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21085568	21085687	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000501:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21085568	21085687	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000501:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21085688	21089844	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000501:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21089845	21090007	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000501:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21089845	21090007	.	-	1	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000501:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21090008	21090102	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000501:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21090103	21090284	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000501:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21090103	21090284	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000501:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21090285	21100744	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000501:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21100745	21100903	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000501:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21100745	21100903	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000501:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21100904	21101018	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000501:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21101019	21101138	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000501:17;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21101019	21101138	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000501:17;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21101139	21101556	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000501:17;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21101557	21101715	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000501:18;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21101557	21101715	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000501:18;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21101716	21104324	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000501:18;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21104325	21104470	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000501:19;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21104325	21104470	.	-	2	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000501:19;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21104471	21104593	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000501:19;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21104594	21104723	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000501:20;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21104594	21104723	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000501:20;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21104724	21108500	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000501:20;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21108501	21108635	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000501:21;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21108501	21108635	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000501:21;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21108636	21110707	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000501:21;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21110708	21110830	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000501:22;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21110708	21110830	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000501:22;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21110831	21112134	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000501:22;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21112135	21112212	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000501:23;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21112135	21112212	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000501:23;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21112213	21113357	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000501:23;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21113358	21113526	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000501:24;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21113358	21113507	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000501:24;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	21113505	21113507	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:NA19239_ch_T0000501;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21113527	21113643	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000501:24;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21113644	21113699	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000501;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000501:25;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	21072837	21113699	100	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_G0000186;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=NA19239_ch_T0000502;Name=KDM5D
NA19239_chrY	CAT	exon	21072837	21075317	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000502:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21074967	21075317	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000502:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	21074967	21074969	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:NA19239_ch_T0000502;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21075318	21075412	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000502:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21075413	21075612	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000502:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21075413	21075612	.	-	2	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000502:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21075613	21075765	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000502:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21075766	21075835	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000502:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21075766	21075835	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000502:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21075836	21076118	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000502:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21076119	21076718	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000502:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21076119	21076718	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000502:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21076719	21076905	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000502:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21076906	21077043	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000502:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21076906	21077043	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000502:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21077044	21077215	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000502:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21077216	21077395	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000502:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21077216	21077395	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000502:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21077396	21077846	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000502:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21077847	21077985	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000502:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21077847	21077985	.	-	1	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000502:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21077986	21078422	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000502:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21078423	21078781	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000502:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21078423	21078781	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000502:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21078782	21079347	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000502:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21079348	21079444	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000502:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21079348	21079444	.	-	1	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000502:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21079445	21084323	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000502:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21084324	21084471	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000502:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084324	21084471	.	-	2	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000502:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084472	21084586	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000502:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21084587	21084711	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000502:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084587	21084711	.	-	1	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000502:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084712	21084794	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000502:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21084795	21084976	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000502:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084795	21084976	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000502:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084977	21085250	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000502:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21085251	21085445	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000502:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21085251	21085445	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000502:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21085446	21085567	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000502:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21085568	21085687	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000502:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21085568	21085687	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000502:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21085688	21089844	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000502:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21089845	21090007	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000502:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21089845	21090007	.	-	1	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000502:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21090008	21090102	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000502:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21090103	21090284	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000502:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21090103	21090284	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000502:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21090285	21100744	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000502:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21100745	21100903	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000502:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21100745	21100903	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000502:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21100904	21101018	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000502:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21101019	21101138	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000502:17;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21101019	21101138	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000502:17;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21101139	21101556	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000502:17;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21101557	21101715	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000502:18;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21101557	21101715	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000502:18;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21101716	21104324	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000502:18;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21104325	21104470	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000502:19;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21104325	21104470	.	-	2	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000502:19;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21104471	21104593	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000502:19;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21104594	21104723	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000502:20;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21104594	21104723	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000502:20;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21104724	21108500	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000502:20;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21108501	21108635	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000502:21;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21108501	21108635	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000502:21;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21108636	21110290	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000502:21;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21110291	21110461	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000502:22;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21110291	21110461	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000502:22;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21110462	21110707	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000502:22;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21110708	21110830	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000502:23;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21110708	21110830	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000502:23;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21110831	21112134	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000502:23;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21112135	21112212	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000502:24;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21112135	21112212	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000502:24;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21112213	21113357	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000502:24;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21113358	21113526	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000502:25;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21113358	21113507	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000502:25;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	21113505	21113507	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:NA19239_ch_T0000502;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21113527	21113643	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000502:25;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21113644	21113699	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000502;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000502:26;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	21072837	21113699	100	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_G0000186;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=NA19239_ch_T0000503;Name=KDM5D
NA19239_chrY	CAT	exon	21072837	21075317	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000503:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21074967	21075317	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000503:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	21074967	21074969	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:NA19239_ch_T0000503;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21075318	21075412	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000503:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21075413	21075612	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000503:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21075413	21075612	.	-	2	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000503:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21075613	21075765	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000503:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21075766	21075835	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000503:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21075766	21075835	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000503:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21075836	21076118	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000503:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21076119	21076718	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000503:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21076119	21076718	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000503:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21076719	21076905	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000503:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21076906	21077043	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000503:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21076906	21077043	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000503:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21077044	21077215	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000503:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21077216	21077395	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000503:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21077216	21077395	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000503:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21077396	21077846	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000503:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21077847	21077985	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000503:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21077847	21077985	.	-	1	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000503:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21077986	21078422	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000503:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21078423	21078781	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000503:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21078423	21078781	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000503:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21078782	21079347	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000503:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21079348	21079444	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000503:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21079348	21079444	.	-	1	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000503:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21079445	21084323	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000503:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21084324	21084471	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000503:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084324	21084471	.	-	2	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000503:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084472	21084586	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000503:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21084587	21084711	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000503:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084587	21084711	.	-	1	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000503:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084712	21084794	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000503:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21084795	21084976	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000503:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084795	21084976	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000503:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084977	21085250	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000503:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21085251	21085445	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000503:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21085251	21085445	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000503:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21085446	21085567	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000503:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21085568	21085687	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000503:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21085568	21085687	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000503:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21085688	21089844	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000503:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21089845	21090007	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000503:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21089845	21090007	.	-	1	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000503:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21090008	21090102	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000503:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21090103	21090284	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000503:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21090103	21090284	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000503:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21090285	21100744	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000503:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21100745	21100903	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000503:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21100745	21100903	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000503:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21100904	21101018	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000503:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21101019	21101138	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000503:17;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21101019	21101138	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000503:17;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21101139	21101556	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000503:17;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21101557	21101715	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000503:18;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21101557	21101715	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000503:18;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21101716	21104324	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000503:18;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21104325	21104470	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000503:19;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21104325	21104470	.	-	2	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000503:19;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21104471	21104593	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000503:19;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21104594	21104723	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000503:20;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21104594	21104723	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000503:20;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21104724	21110290	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000503:20;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21110291	21110461	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000503:21;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21110291	21110461	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000503:21;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21110462	21110707	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000503:21;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21110708	21110830	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000503:22;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21110708	21110830	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000503:22;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21110831	21112134	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000503:22;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21112135	21112212	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000503:23;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21112135	21112212	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000503:23;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21112213	21113357	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000503:23;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21113358	21113526	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000503:24;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21113358	21113507	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000503:24;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	21113505	21113507	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:NA19239_ch_T0000503;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21113527	21113643	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000503:24;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21113644	21113699	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000503;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000503:25;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	21072837	21113699	100	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_G0000186;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=NA19239_ch_T0000504;Name=KDM5D
NA19239_chrY	CAT	exon	21072837	21075317	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000504:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21074967	21075317	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000504:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	21074967	21074969	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:NA19239_ch_T0000504;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21075318	21075412	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000504:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21075413	21075612	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000504:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21075413	21075612	.	-	2	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000504:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21075613	21075765	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000504:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21075766	21075835	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000504:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21075766	21075835	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000504:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21075836	21076118	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000504:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21076119	21076718	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000504:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21076119	21076718	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000504:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21076719	21076905	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000504:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21076906	21077043	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000504:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21076906	21077043	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000504:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21077044	21077215	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000504:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21077216	21077395	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000504:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21077216	21077395	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000504:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21077396	21077846	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000504:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21077847	21077985	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000504:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21077847	21077985	.	-	1	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000504:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21077986	21078422	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000504:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21078423	21078550	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000504:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21078423	21078550	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000504:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21078551	21079347	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000504:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21079348	21079444	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000504:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21079348	21079444	.	-	1	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000504:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21079445	21084323	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000504:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21084324	21084471	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000504:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084324	21084471	.	-	2	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000504:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084472	21084586	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000504:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21084587	21084711	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000504:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084587	21084711	.	-	1	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000504:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084712	21084794	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000504:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21084795	21084976	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000504:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084795	21084976	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000504:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084977	21085250	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000504:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21085251	21085445	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000504:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21085251	21085445	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000504:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21085446	21085567	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000504:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21085568	21085687	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000504:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21085568	21085687	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000504:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21085688	21089844	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000504:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21089845	21090007	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000504:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21089845	21090007	.	-	1	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000504:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21090008	21090102	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000504:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21090103	21090284	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000504:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21090103	21090284	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000504:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21090285	21100744	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000504:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21100745	21100903	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000504:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21100745	21100903	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000504:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21100904	21101018	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000504:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21101019	21101138	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000504:17;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21101019	21101138	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000504:17;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21101139	21101556	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000504:17;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21101557	21101715	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000504:18;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21101557	21101715	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000504:18;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21101716	21104324	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000504:18;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21104325	21104470	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000504:19;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21104325	21104470	.	-	2	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000504:19;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21104471	21104593	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000504:19;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21104594	21104723	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000504:20;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21104594	21104723	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000504:20;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21104724	21108500	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000504:20;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21108501	21108635	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000504:21;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21108501	21108635	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000504:21;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21108636	21110290	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000504:21;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21110291	21110461	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000504:22;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21110291	21110461	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000504:22;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21110462	21110707	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000504:22;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21110708	21110830	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000504:23;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21110708	21110830	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000504:23;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21110831	21112134	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000504:23;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21112135	21112212	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000504:24;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21112135	21112212	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000504:24;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21112213	21113357	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000504:24;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21113358	21113526	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000504:25;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21113358	21113507	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000504:25;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	21113505	21113507	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:NA19239_ch_T0000504;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21113527	21113643	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000504:25;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21113644	21113699	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000504;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000504:26;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	21072837	21113699	100	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_G0000186;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=NA19239_ch_T0000505;Name=KDM5D
NA19239_chrY	CAT	exon	21072837	21075317	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000505:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21074967	21075317	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000505:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	21074967	21074969	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:NA19239_ch_T0000505;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21075318	21075412	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000505:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21075413	21075612	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000505:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21075413	21075612	.	-	2	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000505:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21075613	21075765	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000505:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21075766	21075835	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000505:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21075766	21075835	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000505:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21075836	21076118	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000505:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21076119	21076718	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000505:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21076119	21076718	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000505:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21076719	21076905	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000505:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21076906	21077043	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000505:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21076906	21077043	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000505:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21077044	21077293	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000505:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21077294	21077395	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000505:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21077294	21077395	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000505:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21077396	21077846	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000505:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21077847	21077985	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000505:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21077847	21077985	.	-	1	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000505:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21077986	21078422	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000505:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21078423	21078781	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000505:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21078423	21078781	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000505:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21078782	21079347	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000505:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21079348	21079444	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000505:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21079348	21079444	.	-	1	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000505:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21079445	21084323	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000505:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21084324	21084471	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000505:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084324	21084471	.	-	2	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000505:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084472	21084586	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000505:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21084587	21084711	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000505:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084587	21084711	.	-	1	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000505:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084712	21084794	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000505:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21084795	21084976	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000505:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084795	21084976	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000505:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084977	21085250	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000505:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21085251	21085445	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000505:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21085251	21085445	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000505:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21085446	21085567	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000505:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21085568	21085687	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000505:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21085568	21085687	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000505:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21085688	21089844	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000505:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21089845	21090007	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000505:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21089845	21090007	.	-	1	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000505:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21090008	21090102	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000505:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21090103	21090284	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000505:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21090103	21090284	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000505:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21090285	21100744	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000505:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21100745	21100903	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000505:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21100745	21100903	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000505:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21100904	21101018	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000505:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21101019	21101138	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000505:17;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21101019	21101138	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000505:17;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21101139	21101556	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000505:17;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21101557	21101715	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000505:18;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21101557	21101715	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000505:18;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21101716	21104324	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000505:18;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21104325	21104470	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000505:19;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21104325	21104470	.	-	2	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000505:19;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21104471	21104593	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000505:19;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21104594	21104723	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000505:20;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21104594	21104723	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000505:20;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21104724	21108500	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000505:20;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21108501	21108635	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000505:21;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21108501	21108635	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000505:21;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21108636	21110290	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000505:21;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21110291	21110461	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000505:22;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21110291	21110461	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000505:22;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21110462	21110707	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000505:22;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21110708	21110830	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000505:23;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21110708	21110830	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000505:23;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21110831	21112134	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000505:23;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21112135	21112212	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000505:24;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21112135	21112212	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000505:24;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21112213	21113357	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000505:24;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21113358	21113526	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000505:25;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21113358	21113507	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000505:25;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	21113505	21113507	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:NA19239_ch_T0000505;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21113527	21113643	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000505:25;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21113644	21113699	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000505;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000505:26;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	21072837	21113699	100	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_G0000186;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=NA19239_ch_T0000506;Name=KDM5D
NA19239_chrY	CAT	exon	21072837	21075317	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000506:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21074967	21075317	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000506:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	21074967	21074969	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:NA19239_ch_T0000506;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21075318	21075412	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000506:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21075413	21075612	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000506:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21075413	21075612	.	-	2	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000506:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21075613	21075765	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000506:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21075766	21075835	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000506:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21075766	21075835	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000506:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21075836	21076118	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000506:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21076119	21076718	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000506:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21076119	21076718	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000506:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21076719	21076905	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000506:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21076906	21077043	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000506:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21076906	21077043	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000506:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21077044	21077293	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000506:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21077294	21077395	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000506:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21077294	21077395	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000506:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21077396	21077846	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000506:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21077847	21077985	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000506:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21077847	21077985	.	-	1	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000506:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21077986	21078422	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000506:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21078423	21078781	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000506:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21078423	21078781	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000506:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21078782	21079347	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000506:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21079348	21079444	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000506:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21079348	21079444	.	-	1	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000506:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21079445	21084323	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000506:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21084324	21084471	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000506:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084324	21084471	.	-	2	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000506:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084472	21084586	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000506:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21084587	21084711	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000506:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084587	21084711	.	-	1	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000506:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084712	21084794	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000506:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21084795	21084976	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000506:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084795	21084976	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000506:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084977	21085250	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000506:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21085251	21085445	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000506:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21085251	21085445	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000506:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21085446	21085567	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000506:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21085568	21085687	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000506:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21085568	21085687	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000506:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21085688	21089844	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000506:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21089845	21090007	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000506:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21089845	21090007	.	-	1	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000506:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21090008	21090102	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000506:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21090103	21090284	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000506:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21090103	21090284	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000506:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21090285	21100744	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000506:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21100745	21100903	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000506:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21100745	21100903	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000506:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21100904	21101018	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000506:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21101019	21101138	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000506:17;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21101019	21101138	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000506:17;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21101139	21101556	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000506:17;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21101557	21101715	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000506:18;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21101557	21101715	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000506:18;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21101716	21104324	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000506:18;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21104325	21104470	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000506:19;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21104325	21104470	.	-	2	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000506:19;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21104471	21104593	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000506:19;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21104594	21104723	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000506:20;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21104594	21104723	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000506:20;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21104724	21110290	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000506:20;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21110291	21110461	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000506:21;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21110291	21110461	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000506:21;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21110462	21110707	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000506:21;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21110708	21110830	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000506:22;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21110708	21110830	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000506:22;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21110831	21112134	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000506:22;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21112135	21112212	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000506:23;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21112135	21112212	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000506:23;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21112213	21113357	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000506:23;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21113358	21113526	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000506:24;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21113358	21113507	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000506:24;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	21113505	21113507	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:NA19239_ch_T0000506;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21113527	21113643	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000506:24;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21113644	21113699	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000506;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000506:25;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	21075450	21113699	100	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_G0000186;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=NA19239_ch_T0000507;Name=KDM5D
NA19239_chrY	CAT	exon	21075450	21075580	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000507:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21075552	21075580	.	-	2	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000507:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	21075552	21075554	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:NA19239_ch_T0000507;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21075581	21075765	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000507:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21075766	21075835	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000507:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21075766	21075835	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000507:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21075836	21076118	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000507:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21076119	21076718	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000507:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21076119	21076718	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000507:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21076719	21076905	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000507:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21076906	21077043	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000507:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21076906	21077043	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000507:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21077044	21077215	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000507:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21077216	21077395	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000507:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21077216	21077395	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000507:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21077396	21077846	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000507:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21077847	21077985	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000507:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21077847	21077985	.	-	1	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000507:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21077986	21078422	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000507:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21078423	21078781	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000507:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21078423	21078781	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000507:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21078782	21079347	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000507:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21079348	21079444	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000507:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21079348	21079444	.	-	1	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000507:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21079445	21084323	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000507:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21084324	21084471	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000507:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084324	21084471	.	-	2	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000507:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084472	21084586	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000507:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21084587	21084711	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000507:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084587	21084711	.	-	1	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000507:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084712	21084794	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000507:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21084795	21084976	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000507:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084795	21084976	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000507:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084977	21085250	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000507:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21085251	21085445	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000507:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21085251	21085445	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000507:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21085446	21085567	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000507:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21085568	21085687	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000507:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21085568	21085687	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000507:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21085688	21089844	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000507:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21089845	21090007	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000507:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21089845	21090007	.	-	1	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000507:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21090008	21090102	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000507:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21090103	21090284	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000507:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21090103	21090284	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000507:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21090285	21100744	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000507:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21100745	21100903	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000507:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21100745	21100903	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000507:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21100904	21101018	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000507:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21101019	21101138	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000507:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21101019	21101138	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000507:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21101139	21101556	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000507:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21101557	21101715	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000507:17;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21101557	21101715	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000507:17;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21101716	21104324	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000507:17;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21104325	21104470	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000507:18;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21104325	21104470	.	-	2	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000507:18;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21104471	21104593	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000507:18;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21104594	21104723	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000507:19;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21104594	21104723	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000507:19;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21104724	21108500	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000507:19;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21108501	21108635	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000507:20;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21108501	21108635	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000507:20;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21108636	21110290	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000507:20;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21110291	21110461	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000507:21;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21110291	21110461	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000507:21;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21110462	21110707	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000507:21;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21110708	21110830	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000507:22;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21110708	21110830	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000507:22;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21110831	21112134	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000507:22;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21112135	21112212	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000507:23;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21112135	21112212	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000507:23;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21112213	21113357	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000507:23;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21113358	21113526	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000507:24;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21113358	21113507	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000507:24;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	21113505	21113507	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:NA19239_ch_T0000507;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21113527	21113643	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000507:24;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21113644	21113699	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000507;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000507:25;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	21078432	21113699	100	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_G0000186;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=NA19239_ch_T0000508;Name=KDM5D
NA19239_chrY	CAT	exon	21078432	21079232	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000508:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21079149	21079232	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000508:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	21079149	21079151	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:NA19239_ch_T0000508;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21079233	21079347	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000508:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21079348	21079444	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000508:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21079348	21079444	.	-	1	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000508:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21079445	21084323	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000508:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21084324	21084471	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000508:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084324	21084471	.	-	2	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000508:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084472	21084586	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000508:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21084587	21084711	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000508:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084587	21084711	.	-	1	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000508:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084712	21084794	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000508:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21084795	21084976	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000508:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084795	21084976	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000508:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084977	21085250	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000508:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21085251	21085445	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000508:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21085251	21085445	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000508:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21085446	21085567	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000508:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21085568	21085687	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000508:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21085568	21085687	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000508:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21085688	21089844	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000508:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21089845	21090007	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000508:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21089845	21090007	.	-	1	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000508:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21090008	21090102	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000508:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21090103	21090284	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000508:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21090103	21090284	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000508:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21090285	21100744	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000508:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21100745	21100903	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000508:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21100745	21100903	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000508:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21100904	21101018	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000508:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21101019	21101138	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000508:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21101019	21101138	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000508:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21101139	21101556	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000508:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21101557	21101715	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000508:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21101557	21101715	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000508:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21101716	21104324	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000508:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21104325	21104470	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000508:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21104325	21104470	.	-	2	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000508:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21104471	21104593	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000508:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21104594	21104723	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000508:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21104594	21104723	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000508:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21104724	21108500	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000508:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21108501	21108635	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000508:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21108501	21108635	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000508:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21108636	21110290	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000508:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21110291	21110461	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000508:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21110291	21110461	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000508:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21110462	21110707	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000508:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21110708	21110830	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000508:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21110708	21110830	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000508:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21110831	21112134	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000508:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21112135	21112212	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000508:17;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21112135	21112212	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000508:17;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21112213	21113357	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000508:17;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21113358	21113526	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000508:18;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21113358	21113507	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000508:18;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	21113505	21113507	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:NA19239_ch_T0000508;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21113527	21113643	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000508:18;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21113644	21113699	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000508;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000508:19;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	21079372	21113699	100	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_G0000186;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=NA19239_ch_T0000509;Name=KDM5D
NA19239_chrY	CAT	exon	21079372	21079444	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000509:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21079445	21084555	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000509:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21084556	21084711	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000509:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084579	21084711	.	-	1	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000509:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	21084579	21084581	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:NA19239_ch_T0000509;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084712	21084794	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000509:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21084795	21084976	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000509:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084795	21084976	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000509:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084977	21085250	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000509:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21085251	21085445	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000509:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21085251	21085445	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000509:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21085446	21085567	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000509:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21085568	21085687	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000509:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21085568	21085687	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000509:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21085688	21089844	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000509:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21089845	21090007	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000509:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21089845	21090007	.	-	1	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000509:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21090008	21090102	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000509:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21090103	21090284	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000509:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21090103	21090284	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000509:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21090285	21100744	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000509:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21100745	21100903	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000509:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21100745	21100903	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000509:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21100904	21101018	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000509:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21101019	21101138	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000509:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21101019	21101138	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000509:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21101139	21101556	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000509:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21101557	21101715	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000509:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21101557	21101715	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000509:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21101716	21104324	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000509:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21104325	21104470	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000509:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21104325	21104470	.	-	2	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000509:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21104471	21104593	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000509:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21104594	21104723	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000509:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21104594	21104723	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000509:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21104724	21108500	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000509:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21108501	21108635	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000509:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21108501	21108635	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000509:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21108636	21110290	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000509:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21110291	21110461	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000509:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21110291	21110461	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000509:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21110462	21110707	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000509:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21110708	21110830	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000509:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21110708	21110830	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000509:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21110831	21112134	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000509:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21112135	21112212	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000509:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21112135	21112212	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000509:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21112213	21113357	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000509:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21113358	21113526	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000509:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21113358	21113507	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000509:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	21113505	21113507	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:NA19239_ch_T0000509;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21113527	21113643	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000509:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21113644	21113699	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000509;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000509:17;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	21084843	21113699	100	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_G0000186;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=NA19239_ch_T0000510;Name=KDM5D
NA19239_chrY	CAT	exon	21084843	21084976	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000510:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21084960	21084976	.	-	2	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000510:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	21084960	21084962	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:NA19239_ch_T0000510;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21084977	21085070	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000510:0;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21085071	21085083	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000510:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21085071	21085083	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000510:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21085084	21085250	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000510:1;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21085251	21085445	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000510:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21085251	21085445	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000510:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21085446	21085567	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000510:2;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21085568	21085687	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000510:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21085568	21085687	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000510:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21085688	21089844	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000510:3;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21089845	21090007	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000510:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21089845	21090007	.	-	1	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000510:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21090008	21090102	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000510:4;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21090103	21090284	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000510:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21090103	21090284	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000510:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21090285	21100744	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000510:5;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21100745	21100903	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000510:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21100745	21100903	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000510:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21100904	21101018	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000510:6;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21101019	21101138	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000510:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21101019	21101138	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000510:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21101139	21101556	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000510:7;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21101557	21101715	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000510:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21101557	21101715	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000510:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21101716	21104324	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000510:8;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21104325	21104470	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000510:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21104325	21104470	.	-	2	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000510:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21104471	21104593	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000510:9;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21104594	21104723	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000510:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21104594	21104723	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000510:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21104724	21108500	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000510:10;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21108501	21108635	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000510:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21108501	21108635	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000510:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21108636	21110290	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000510:11;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21110291	21110461	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000510:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21110291	21110461	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000510:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21110462	21110707	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000510:12;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21110708	21110830	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000510:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21110708	21110830	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000510:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21110831	21112134	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000510:13;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21112135	21112212	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000510:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21112135	21112212	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000510:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21112213	21113357	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000510:14;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21113358	21113526	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000510:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21113358	21113507	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19239_ch_T0000510:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	21113505	21113507	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:NA19239_ch_T0000510;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21113527	21113643	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19239_ch_T0000510:15;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21113644	21113699	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000510;gene_id=NA19239_ch_G0000186;Parent=NA19239_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19239_ch_T0000510:16;Name=KDM5D;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	21113729	21126422	.	+	.	source_gene_common_name=LOC105377224;source_gene=hg002_chrY_paternal_436;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;gene_id=NA19239_ch_G0000187;gene_biotype=lncRNA;gene_name=LOC105377224;gene_sources=liftoff;ID=NA19239_ch_G0000187;Name=LOC105377224
NA19239_chrY	CAT	transcript	21113729	21126529	1000	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=NA19239_ch_T0000511;gene_id=NA19239_ch_G0000187;Parent=NA19239_ch_G0000187;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=NA19239_ch_T0000511;Name=LOC105377224
NA19239_chrY	CAT	exon	21113729	21114686	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=NA19239_ch_T0000511;gene_id=NA19239_ch_G0000187;Parent=NA19239_ch_T0000511;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:NA19239_ch_T0000511:0;Name=LOC105377224;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21114687	21123598	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=NA19239_ch_T0000511;gene_id=NA19239_ch_G0000187;Parent=NA19239_ch_T0000511;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:NA19239_ch_T0000511:0;Name=LOC105377224;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21123599	21123788	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=NA19239_ch_T0000511;gene_id=NA19239_ch_G0000187;Parent=NA19239_ch_T0000511;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:NA19239_ch_T0000511:1;Name=LOC105377224;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21123789	21124177	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=NA19239_ch_T0000511;gene_id=NA19239_ch_G0000187;Parent=NA19239_ch_T0000511;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:NA19239_ch_T0000511:1;Name=LOC105377224;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21124178	21126529	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=NA19239_ch_T0000511;gene_id=NA19239_ch_G0000187;Parent=NA19239_ch_T0000511;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:NA19239_ch_T0000511:2;Name=LOC105377224;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	21113758	21128044	1000	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=NA19239_ch_T0000512;gene_id=NA19239_ch_G0000187;Parent=NA19239_ch_G0000187;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=NA19239_ch_T0000512;Name=LOC105377224
NA19239_chrY	CAT	exon	21113758	21114686	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=NA19239_ch_T0000512;gene_id=NA19239_ch_G0000187;Parent=NA19239_ch_T0000512;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:NA19239_ch_T0000512:0;Name=LOC105377224;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21114687	21123699	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=NA19239_ch_T0000512;gene_id=NA19239_ch_G0000187;Parent=NA19239_ch_T0000512;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:NA19239_ch_T0000512:0;Name=LOC105377224;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21123700	21123788	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=NA19239_ch_T0000512;gene_id=NA19239_ch_G0000187;Parent=NA19239_ch_T0000512;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:NA19239_ch_T0000512:1;Name=LOC105377224;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21123789	21124177	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=NA19239_ch_T0000512;gene_id=NA19239_ch_G0000187;Parent=NA19239_ch_T0000512;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:NA19239_ch_T0000512:1;Name=LOC105377224;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21124178	21128044	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=NA19239_ch_T0000512;gene_id=NA19239_ch_G0000187;Parent=NA19239_ch_T0000512;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:NA19239_ch_T0000512:2;Name=LOC105377224;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	21113811	21126422	1000	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=NA19239_ch_T0000513;gene_id=NA19239_ch_G0000187;Parent=NA19239_ch_G0000187;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=NA19239_ch_T0000513;Name=LOC105377224
NA19239_chrY	CAT	exon	21113811	21114686	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=NA19239_ch_T0000513;gene_id=NA19239_ch_G0000187;Parent=NA19239_ch_T0000513;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:NA19239_ch_T0000513:0;Name=LOC105377224;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21114687	21123699	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=NA19239_ch_T0000513;gene_id=NA19239_ch_G0000187;Parent=NA19239_ch_T0000513;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:NA19239_ch_T0000513:0;Name=LOC105377224;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21123700	21123788	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=NA19239_ch_T0000513;gene_id=NA19239_ch_G0000187;Parent=NA19239_ch_T0000513;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:NA19239_ch_T0000513:1;Name=LOC105377224;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21123789	21124177	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=NA19239_ch_T0000513;gene_id=NA19239_ch_G0000187;Parent=NA19239_ch_T0000513;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:NA19239_ch_T0000513:1;Name=LOC105377224;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21124178	21124297	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=NA19239_ch_T0000513;gene_id=NA19239_ch_G0000187;Parent=NA19239_ch_T0000513;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:NA19239_ch_T0000513:2;Name=LOC105377224;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21124298	21125615	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=NA19239_ch_T0000513;gene_id=NA19239_ch_G0000187;Parent=NA19239_ch_T0000513;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:NA19239_ch_T0000513:2;Name=LOC105377224;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21125616	21126422	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=NA19239_ch_T0000513;gene_id=NA19239_ch_G0000187;Parent=NA19239_ch_T0000513;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:NA19239_ch_T0000513:3;Name=LOC105377224;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	21835654	21889204	.	-	.	source_gene_common_name=TTTY10;source_gene=hg002_chrY_paternal_441;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;gene_id=NA19239_ch_G0000188;gene_biotype=lncRNA;gene_name=TTTY10;gene_sources=liftoff;ID=NA19239_ch_G0000188;Name=TTTY10
NA19239_chrY	CAT	transcript	21835654	21889204	1000	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=NA19239_ch_T0000514;gene_id=NA19239_ch_G0000188;Parent=NA19239_ch_G0000188;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=NA19239_ch_T0000514;Name=TTTY10
NA19239_chrY	CAT	exon	21835654	21835808	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=NA19239_ch_T0000514;gene_id=NA19239_ch_G0000188;Parent=NA19239_ch_T0000514;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:NA19239_ch_T0000514:0;Name=TTTY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21835809	21836413	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=NA19239_ch_T0000514;gene_id=NA19239_ch_G0000188;Parent=NA19239_ch_T0000514;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:NA19239_ch_T0000514:0;Name=TTTY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21836414	21836653	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=NA19239_ch_T0000514;gene_id=NA19239_ch_G0000188;Parent=NA19239_ch_T0000514;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:NA19239_ch_T0000514:1;Name=TTTY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21836654	21838174	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=NA19239_ch_T0000514;gene_id=NA19239_ch_G0000188;Parent=NA19239_ch_T0000514;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:NA19239_ch_T0000514:1;Name=TTTY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21838175	21838234	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=NA19239_ch_T0000514;gene_id=NA19239_ch_G0000188;Parent=NA19239_ch_T0000514;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:NA19239_ch_T0000514:2;Name=TTTY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21838235	21839857	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=NA19239_ch_T0000514;gene_id=NA19239_ch_G0000188;Parent=NA19239_ch_T0000514;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:NA19239_ch_T0000514:2;Name=TTTY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21839858	21839967	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=NA19239_ch_T0000514;gene_id=NA19239_ch_G0000188;Parent=NA19239_ch_T0000514;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:NA19239_ch_T0000514:3;Name=TTTY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21839968	21877327	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=NA19239_ch_T0000514;gene_id=NA19239_ch_G0000188;Parent=NA19239_ch_T0000514;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:NA19239_ch_T0000514:3;Name=TTTY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21877328	21877432	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=NA19239_ch_T0000514;gene_id=NA19239_ch_G0000188;Parent=NA19239_ch_T0000514;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:NA19239_ch_T0000514:4;Name=TTTY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21877433	21888246	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=NA19239_ch_T0000514;gene_id=NA19239_ch_G0000188;Parent=NA19239_ch_T0000514;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:NA19239_ch_T0000514:4;Name=TTTY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21888247	21889204	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=NA19239_ch_T0000514;gene_id=NA19239_ch_G0000188;Parent=NA19239_ch_T0000514;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:NA19239_ch_T0000514:5;Name=TTTY10;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	21945751	21963131	.	+	.	source_gene_common_name=EIF1AY;source_gene=hg002_chrY_paternal_443;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;gene_id=NA19239_ch_G0000189;gene_biotype=protein_coding;gene_name=EIF1AY;gene_sources=liftoff,augTM;ID=NA19239_ch_G0000189;Name=EIF1AY
NA19239_chrY	CAT	transcript	21945751	21963131	100	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000515;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_G0000189;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=NA19239_ch_T0000515;Name=EIF1AY
NA19239_chrY	CAT	exon	21945751	21945862	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000515;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000515;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:NA19239_ch_T0000515:0;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21945847	21945862	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000515;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000515;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:NA19239_ch_T0000515:0;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	21945847	21945849	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000515;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000515;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=start_codon:NA19239_ch_T0000515;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21945863	21949582	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000515;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000515;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:NA19239_ch_T0000515:0;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21949583	21949666	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000515;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000515;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:NA19239_ch_T0000515:1;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21949583	21949666	.	+	2	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000515;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000515;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:NA19239_ch_T0000515:1;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21949667	21952564	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000515;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000515;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:NA19239_ch_T0000515:1;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21952565	21952668	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000515;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000515;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:NA19239_ch_T0000515:2;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21952565	21952668	.	+	2	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000515;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000515;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:NA19239_ch_T0000515:2;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21952669	21957999	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000515;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000515;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:NA19239_ch_T0000515:2;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21958000	21958081	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000515;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000515;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:NA19239_ch_T0000515:3;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21958000	21958081	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000515;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000515;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:NA19239_ch_T0000515:3;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21958082	21959459	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000515;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000515;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:NA19239_ch_T0000515:3;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21959460	21959551	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000515;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000515;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:NA19239_ch_T0000515:4;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21959460	21959551	.	+	2	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000515;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000515;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:NA19239_ch_T0000515:4;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21959552	21962317	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000515;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000515;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:NA19239_ch_T0000515:4;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21962318	21963131	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000515;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000515;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:NA19239_ch_T0000515:5;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21962318	21962323	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000515;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000515;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:NA19239_ch_T0000515:5;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	21962321	21962323	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000515;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000515;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=stop_codon:NA19239_ch_T0000515;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	21945751	21963131	100	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000516;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_G0000189;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=NA19239_ch_T0000516;Name=EIF1AY
NA19239_chrY	CAT	exon	21945751	21945862	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000516;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000516;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:NA19239_ch_T0000516:0;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21945847	21945862	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000516;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000516;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:NA19239_ch_T0000516:0;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	21945847	21945849	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000516;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000516;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=start_codon:NA19239_ch_T0000516;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21945863	21949582	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000516;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000516;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:NA19239_ch_T0000516:0;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21949583	21949666	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000516;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000516;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:NA19239_ch_T0000516:1;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21949583	21949666	.	+	2	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000516;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000516;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:NA19239_ch_T0000516:1;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21949667	21952564	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000516;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000516;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:NA19239_ch_T0000516:1;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21952565	21952668	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000516;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000516;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:NA19239_ch_T0000516:2;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21952565	21952668	.	+	2	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000516;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000516;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:NA19239_ch_T0000516:2;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21952669	21954449	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000516;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000516;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:NA19239_ch_T0000516:2;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21954450	21954500	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000516;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000516;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:NA19239_ch_T0000516:3;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21954450	21954500	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000516;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000516;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:NA19239_ch_T0000516:3;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21954501	21957999	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000516;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000516;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:NA19239_ch_T0000516:3;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21958000	21958081	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000516;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000516;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:NA19239_ch_T0000516:4;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21958000	21958081	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000516;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000516;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:NA19239_ch_T0000516:4;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21958082	21959459	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000516;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000516;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:NA19239_ch_T0000516:4;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21959460	21959551	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000516;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000516;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:NA19239_ch_T0000516:5;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21959460	21959551	.	+	2	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000516;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000516;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:NA19239_ch_T0000516:5;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	21959552	21962317	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000516;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000516;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:NA19239_ch_T0000516:5;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	21962318	21963131	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000516;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000516;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:NA19239_ch_T0000516:6;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	21962318	21962323	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000516;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000516;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:NA19239_ch_T0000516:6;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	21962321	21962323	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000516;gene_id=NA19239_ch_G0000189;Parent=NA19239_ch_T0000516;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=stop_codon:NA19239_ch_T0000516;Name=EIF1AY;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	22126088	22151011	.	+	.	source_gene_common_name=RPS4Y2;source_gene=hg002_chrY_paternal_446;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;gene_id=NA19239_ch_G0000190;gene_biotype=protein_coding;gene_name=RPS4Y2;gene_sources=liftoff,augTM;ID=NA19239_ch_G0000190;Name=RPS4Y2
NA19239_chrY	CAT	transcript	22126088	22151011	100	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000517;gene_id=NA19239_ch_G0000190;Parent=NA19239_ch_G0000190;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=NA19239_ch_T0000517;Name=RPS4Y2
NA19239_chrY	CAT	exon	22126088	22126146	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000517;gene_id=NA19239_ch_G0000190;Parent=NA19239_ch_T0000517;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:NA19239_ch_T0000517:0;Name=RPS4Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22126144	22126146	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000517;gene_id=NA19239_ch_G0000190;Parent=NA19239_ch_T0000517;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:NA19239_ch_T0000517:0;Name=RPS4Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	22126144	22126146	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000517;gene_id=NA19239_ch_G0000190;Parent=NA19239_ch_T0000517;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=start_codon:NA19239_ch_T0000517;Name=RPS4Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22126147	22126756	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000517;gene_id=NA19239_ch_G0000190;Parent=NA19239_ch_T0000517;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:NA19239_ch_T0000517:0;Name=RPS4Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22126757	22126834	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000517;gene_id=NA19239_ch_G0000190;Parent=NA19239_ch_T0000517;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:NA19239_ch_T0000517:1;Name=RPS4Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22126757	22126834	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000517;gene_id=NA19239_ch_G0000190;Parent=NA19239_ch_T0000517;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:NA19239_ch_T0000517:1;Name=RPS4Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22126835	22129846	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000517;gene_id=NA19239_ch_G0000190;Parent=NA19239_ch_T0000517;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:NA19239_ch_T0000517:1;Name=RPS4Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22129847	22130027	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000517;gene_id=NA19239_ch_G0000190;Parent=NA19239_ch_T0000517;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:NA19239_ch_T0000517:2;Name=RPS4Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22129847	22130027	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000517;gene_id=NA19239_ch_G0000190;Parent=NA19239_ch_T0000517;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:NA19239_ch_T0000517:2;Name=RPS4Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22130028	22131262	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000517;gene_id=NA19239_ch_G0000190;Parent=NA19239_ch_T0000517;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:NA19239_ch_T0000517:2;Name=RPS4Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22131263	22131360	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000517;gene_id=NA19239_ch_G0000190;Parent=NA19239_ch_T0000517;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:NA19239_ch_T0000517:3;Name=RPS4Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22131263	22131360	.	+	2	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000517;gene_id=NA19239_ch_G0000190;Parent=NA19239_ch_T0000517;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:NA19239_ch_T0000517:3;Name=RPS4Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22131361	22138783	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000517;gene_id=NA19239_ch_G0000190;Parent=NA19239_ch_T0000517;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:NA19239_ch_T0000517:3;Name=RPS4Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22138784	22138955	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000517;gene_id=NA19239_ch_G0000190;Parent=NA19239_ch_T0000517;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:NA19239_ch_T0000517:4;Name=RPS4Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22138784	22138955	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000517;gene_id=NA19239_ch_G0000190;Parent=NA19239_ch_T0000517;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:NA19239_ch_T0000517:4;Name=RPS4Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22138956	22149487	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000517;gene_id=NA19239_ch_G0000190;Parent=NA19239_ch_T0000517;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:NA19239_ch_T0000517:4;Name=RPS4Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22149488	22149645	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000517;gene_id=NA19239_ch_G0000190;Parent=NA19239_ch_T0000517;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:NA19239_ch_T0000517:5;Name=RPS4Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22149488	22149645	.	+	2	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000517;gene_id=NA19239_ch_G0000190;Parent=NA19239_ch_T0000517;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:NA19239_ch_T0000517:5;Name=RPS4Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22149646	22150909	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000517;gene_id=NA19239_ch_G0000190;Parent=NA19239_ch_T0000517;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:NA19239_ch_T0000517:5;Name=RPS4Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22150910	22151011	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000517;gene_id=NA19239_ch_G0000190;Parent=NA19239_ch_T0000517;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:NA19239_ch_T0000517:6;Name=RPS4Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22150910	22151011	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000517;gene_id=NA19239_ch_G0000190;Parent=NA19239_ch_T0000517;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:NA19239_ch_T0000517:6;Name=RPS4Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	22151009	22151011	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000517;gene_id=NA19239_ch_G0000190;Parent=NA19239_ch_T0000517;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=stop_codon:NA19239_ch_T0000517;Name=RPS4Y2;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	22508693	22543040	.	+	.	source_gene_common_name=LOC105377225;source_gene=hg002_chrY_paternal_451;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;gene_id=NA19239_ch_G0000191;gene_biotype=lncRNA;gene_name=LOC105377225;gene_sources=liftoff;ID=NA19239_ch_G0000191;Name=LOC105377225
NA19239_chrY	CAT	transcript	22508693	22540285	1000	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=NA19239_ch_T0000518;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_G0000191;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=NA19239_ch_T0000518;Name=LOC105377225
NA19239_chrY	CAT	exon	22508693	22508928	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=NA19239_ch_T0000518;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000518;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19239_ch_T0000518:0;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22508929	22518239	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=NA19239_ch_T0000518;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000518;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19239_ch_T0000518:0;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22518240	22518290	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=NA19239_ch_T0000518;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000518;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19239_ch_T0000518:1;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22518291	22518482	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=NA19239_ch_T0000518;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000518;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19239_ch_T0000518:1;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22518483	22518577	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=NA19239_ch_T0000518;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000518;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19239_ch_T0000518:2;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22518578	22521652	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=NA19239_ch_T0000518;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000518;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19239_ch_T0000518:2;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22521653	22521706	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=NA19239_ch_T0000518;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000518;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19239_ch_T0000518:3;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22521707	22522902	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=NA19239_ch_T0000518;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000518;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19239_ch_T0000518:3;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22522903	22523037	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=NA19239_ch_T0000518;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000518;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19239_ch_T0000518:4;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22523038	22540021	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=NA19239_ch_T0000518;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000518;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19239_ch_T0000518:4;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22540022	22540285	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=NA19239_ch_T0000518;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000518;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19239_ch_T0000518:5;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	22508693	22540285	1000	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=NA19239_ch_T0000519;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_G0000191;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=NA19239_ch_T0000519;Name=LOC105377225
NA19239_chrY	CAT	exon	22508693	22508928	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=NA19239_ch_T0000519;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000519;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19239_ch_T0000519:0;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22508929	22518482	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=NA19239_ch_T0000519;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000519;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19239_ch_T0000519:0;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22518483	22518577	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=NA19239_ch_T0000519;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000519;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19239_ch_T0000519:1;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22518578	22521652	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=NA19239_ch_T0000519;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000519;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19239_ch_T0000519:1;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22521653	22521706	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=NA19239_ch_T0000519;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000519;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19239_ch_T0000519:2;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22521707	22522902	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=NA19239_ch_T0000519;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000519;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19239_ch_T0000519:2;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22522903	22523037	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=NA19239_ch_T0000519;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000519;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19239_ch_T0000519:3;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22523038	22540021	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=NA19239_ch_T0000519;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000519;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19239_ch_T0000519:3;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22540022	22540285	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=NA19239_ch_T0000519;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000519;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19239_ch_T0000519:4;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	22508693	22540285	1000	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=NA19239_ch_T0000520;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_G0000191;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=NA19239_ch_T0000520;Name=LOC105377225
NA19239_chrY	CAT	exon	22508693	22508928	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=NA19239_ch_T0000520;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000520;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19239_ch_T0000520:0;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22508929	22518605	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=NA19239_ch_T0000520;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000520;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19239_ch_T0000520:0;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22518606	22518659	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=NA19239_ch_T0000520;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000520;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19239_ch_T0000520:1;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22518660	22521652	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=NA19239_ch_T0000520;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000520;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19239_ch_T0000520:1;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22521653	22521706	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=NA19239_ch_T0000520;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000520;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19239_ch_T0000520:2;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22521707	22522902	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=NA19239_ch_T0000520;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000520;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19239_ch_T0000520:2;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22522903	22523037	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=NA19239_ch_T0000520;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000520;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19239_ch_T0000520:3;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22523038	22540021	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=NA19239_ch_T0000520;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000520;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19239_ch_T0000520:3;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22540022	22540285	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=NA19239_ch_T0000520;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000520;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19239_ch_T0000520:4;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	22508693	22543040	1000	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=NA19239_ch_T0000521;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_G0000191;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=NA19239_ch_T0000521;Name=LOC105377225
NA19239_chrY	CAT	exon	22508693	22508928	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=NA19239_ch_T0000521;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000521;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19239_ch_T0000521:0;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22508929	22514843	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=NA19239_ch_T0000521;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000521;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19239_ch_T0000521:0;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22514844	22514935	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=NA19239_ch_T0000521;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000521;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19239_ch_T0000521:1;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22514936	22518239	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=NA19239_ch_T0000521;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000521;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19239_ch_T0000521:1;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22518240	22518290	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=NA19239_ch_T0000521;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000521;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19239_ch_T0000521:2;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22518291	22518482	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=NA19239_ch_T0000521;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000521;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19239_ch_T0000521:2;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22518483	22518577	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=NA19239_ch_T0000521;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000521;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19239_ch_T0000521:3;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22518578	22521652	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=NA19239_ch_T0000521;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000521;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19239_ch_T0000521:3;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22521653	22521706	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=NA19239_ch_T0000521;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000521;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19239_ch_T0000521:4;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22521707	22522902	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=NA19239_ch_T0000521;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000521;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19239_ch_T0000521:4;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22522903	22523037	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=NA19239_ch_T0000521;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000521;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19239_ch_T0000521:5;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22523038	22540021	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=NA19239_ch_T0000521;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000521;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19239_ch_T0000521:5;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22540022	22543040	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=NA19239_ch_T0000521;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000521;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19239_ch_T0000521:6;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	22514103	22540285	1000	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=NA19239_ch_T0000522;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_G0000191;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=NA19239_ch_T0000522;Name=LOC105377225
NA19239_chrY	CAT	exon	22514103	22518290	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=NA19239_ch_T0000522;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000522;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19239_ch_T0000522:0;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22518291	22518482	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=NA19239_ch_T0000522;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000522;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19239_ch_T0000522:0;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22518483	22518659	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=NA19239_ch_T0000522;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000522;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19239_ch_T0000522:1;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22518660	22521652	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=NA19239_ch_T0000522;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000522;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19239_ch_T0000522:1;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22521653	22521706	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=NA19239_ch_T0000522;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000522;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19239_ch_T0000522:2;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22521707	22522902	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=NA19239_ch_T0000522;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000522;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19239_ch_T0000522:2;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22522903	22523037	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=NA19239_ch_T0000522;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000522;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19239_ch_T0000522:3;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22523038	22540021	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=NA19239_ch_T0000522;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000522;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19239_ch_T0000522:3;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22540022	22540285	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=NA19239_ch_T0000522;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000522;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19239_ch_T0000522:4;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	22514103	22540285	1000	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=NA19239_ch_T0000523;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_G0000191;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=NA19239_ch_T0000523;Name=LOC105377225
NA19239_chrY	CAT	exon	22514103	22518290	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=NA19239_ch_T0000523;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000523;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19239_ch_T0000523:0;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22518291	22518605	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=NA19239_ch_T0000523;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000523;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19239_ch_T0000523:0;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22518606	22518659	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=NA19239_ch_T0000523;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000523;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19239_ch_T0000523:1;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22518660	22521652	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=NA19239_ch_T0000523;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000523;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19239_ch_T0000523:1;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22521653	22521706	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=NA19239_ch_T0000523;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000523;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19239_ch_T0000523:2;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22521707	22522902	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=NA19239_ch_T0000523;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000523;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19239_ch_T0000523:2;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22522903	22523037	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=NA19239_ch_T0000523;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000523;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19239_ch_T0000523:3;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22523038	22540021	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=NA19239_ch_T0000523;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000523;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19239_ch_T0000523:3;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22540022	22540285	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=NA19239_ch_T0000523;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000523;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19239_ch_T0000523:4;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	22514103	22540285	1000	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=NA19239_ch_T0000524;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_G0000191;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=NA19239_ch_T0000524;Name=LOC105377225
NA19239_chrY	CAT	exon	22514103	22518290	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=NA19239_ch_T0000524;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000524;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19239_ch_T0000524:0;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22518291	22518482	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=NA19239_ch_T0000524;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000524;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19239_ch_T0000524:0;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22518483	22518659	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=NA19239_ch_T0000524;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000524;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19239_ch_T0000524:1;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22518660	22521652	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=NA19239_ch_T0000524;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000524;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19239_ch_T0000524:1;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22521653	22521706	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=NA19239_ch_T0000524;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000524;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19239_ch_T0000524:2;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22521707	22522743	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=NA19239_ch_T0000524;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000524;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19239_ch_T0000524:2;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22522744	22522835	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=NA19239_ch_T0000524;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000524;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19239_ch_T0000524:3;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22522836	22540021	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=NA19239_ch_T0000524;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000524;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19239_ch_T0000524:3;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22540022	22540285	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=NA19239_ch_T0000524;gene_id=NA19239_ch_G0000191;Parent=NA19239_ch_T0000524;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19239_ch_T0000524:4;Name=LOC105377225;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	22598200	22623436	.	+	.	source_gene_common_name=LOC107987346;source_gene=hg002_chrY_paternal_453;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;gene_id=NA19239_ch_G0000192;gene_biotype=lncRNA;gene_name=LOC107987346;gene_sources=liftoff;ID=NA19239_ch_G0000192;Name=LOC107987346
NA19239_chrY	CAT	transcript	22598200	22623436	1000	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=NA19239_ch_T0000525;gene_id=NA19239_ch_G0000192;Parent=NA19239_ch_G0000192;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=NA19239_ch_T0000525;Name=LOC107987346
NA19239_chrY	CAT	exon	22598200	22598237	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=NA19239_ch_T0000525;gene_id=NA19239_ch_G0000192;Parent=NA19239_ch_T0000525;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:NA19239_ch_T0000525:0;Name=LOC107987346;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22598238	22598414	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=NA19239_ch_T0000525;gene_id=NA19239_ch_G0000192;Parent=NA19239_ch_T0000525;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:NA19239_ch_T0000525:0;Name=LOC107987346;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22598415	22598522	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=NA19239_ch_T0000525;gene_id=NA19239_ch_G0000192;Parent=NA19239_ch_T0000525;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:NA19239_ch_T0000525:1;Name=LOC107987346;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22598523	22620611	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=NA19239_ch_T0000525;gene_id=NA19239_ch_G0000192;Parent=NA19239_ch_T0000525;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:NA19239_ch_T0000525:1;Name=LOC107987346;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22620612	22623436	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=NA19239_ch_T0000525;gene_id=NA19239_ch_G0000192;Parent=NA19239_ch_T0000525;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:NA19239_ch_T0000525:2;Name=LOC107987346;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	22598200	22623436	1000	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=NA19239_ch_T0000526;gene_id=NA19239_ch_G0000192;Parent=NA19239_ch_G0000192;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=NA19239_ch_T0000526;Name=LOC107987346
NA19239_chrY	CAT	exon	22598200	22598237	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=NA19239_ch_T0000526;gene_id=NA19239_ch_G0000192;Parent=NA19239_ch_T0000526;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:NA19239_ch_T0000526:0;Name=LOC107987346;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22598238	22598414	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=NA19239_ch_T0000526;gene_id=NA19239_ch_G0000192;Parent=NA19239_ch_T0000526;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:NA19239_ch_T0000526:0;Name=LOC107987346;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22598415	22598522	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=NA19239_ch_T0000526;gene_id=NA19239_ch_G0000192;Parent=NA19239_ch_T0000526;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:NA19239_ch_T0000526:1;Name=LOC107987346;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22598523	22620611	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=NA19239_ch_T0000526;gene_id=NA19239_ch_G0000192;Parent=NA19239_ch_T0000526;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:NA19239_ch_T0000526:1;Name=LOC107987346;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22620612	22620770	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=NA19239_ch_T0000526;gene_id=NA19239_ch_G0000192;Parent=NA19239_ch_T0000526;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:NA19239_ch_T0000526:2;Name=LOC107987346;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22620771	22623184	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=NA19239_ch_T0000526;gene_id=NA19239_ch_G0000192;Parent=NA19239_ch_T0000526;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:NA19239_ch_T0000526:2;Name=LOC107987346;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22623185	22623436	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=NA19239_ch_T0000526;gene_id=NA19239_ch_G0000192;Parent=NA19239_ch_T0000526;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:NA19239_ch_T0000526:3;Name=LOC107987346;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	22618127	22673064	.	-	.	source_gene_common_name=LOC107987347;source_gene=hg002_chrY_paternal_454;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;gene_id=NA19239_ch_G0000193;gene_biotype=lncRNA;gene_name=LOC107987347;gene_sources=liftoff;ID=NA19239_ch_G0000193;Name=LOC107987347
NA19239_chrY	CAT	transcript	22618127	22673064	1000	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=NA19239_ch_T0000527;gene_id=NA19239_ch_G0000193;Parent=NA19239_ch_G0000193;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=NA19239_ch_T0000527;Name=LOC107987347
NA19239_chrY	CAT	exon	22618127	22619212	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=NA19239_ch_T0000527;gene_id=NA19239_ch_G0000193;Parent=NA19239_ch_T0000527;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=exon:NA19239_ch_T0000527:0;Name=LOC107987347;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22619213	22666208	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=NA19239_ch_T0000527;gene_id=NA19239_ch_G0000193;Parent=NA19239_ch_T0000527;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=intron:NA19239_ch_T0000527:0;Name=LOC107987347;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22666209	22666274	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=NA19239_ch_T0000527;gene_id=NA19239_ch_G0000193;Parent=NA19239_ch_T0000527;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=exon:NA19239_ch_T0000527:1;Name=LOC107987347;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22666275	22672614	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=NA19239_ch_T0000527;gene_id=NA19239_ch_G0000193;Parent=NA19239_ch_T0000527;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=intron:NA19239_ch_T0000527:1;Name=LOC107987347;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22672615	22673064	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=NA19239_ch_T0000527;gene_id=NA19239_ch_G0000193;Parent=NA19239_ch_T0000527;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=exon:NA19239_ch_T0000527:2;Name=LOC107987347;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	22751964	22821905	.	-	.	source_gene_common_name=PRORY;source_gene=hg002_chrY_paternal_456;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;gene_id=NA19239_ch_G0000194;gene_biotype=lncRNA;gene_name=PRORY;gene_sources=liftoff;ID=NA19239_ch_G0000194;Name=PRORY
NA19239_chrY	CAT	transcript	22751964	22821905	1000	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=NA19239_ch_T0000528;gene_id=NA19239_ch_G0000194;Parent=NA19239_ch_G0000194;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=NA19239_ch_T0000528;Name=PRORY
NA19239_chrY	CAT	exon	22751964	22753338	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=NA19239_ch_T0000528;gene_id=NA19239_ch_G0000194;Parent=NA19239_ch_T0000528;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:NA19239_ch_T0000528:0;Name=PRORY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22753339	22753489	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=NA19239_ch_T0000528;gene_id=NA19239_ch_G0000194;Parent=NA19239_ch_T0000528;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=intron:NA19239_ch_T0000528:0;Name=PRORY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22753490	22753854	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=NA19239_ch_T0000528;gene_id=NA19239_ch_G0000194;Parent=NA19239_ch_T0000528;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:NA19239_ch_T0000528:1;Name=PRORY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22753855	22753970	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=NA19239_ch_T0000528;gene_id=NA19239_ch_G0000194;Parent=NA19239_ch_T0000528;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=intron:NA19239_ch_T0000528:1;Name=PRORY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22753971	22754027	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=NA19239_ch_T0000528;gene_id=NA19239_ch_G0000194;Parent=NA19239_ch_T0000528;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:NA19239_ch_T0000528:2;Name=PRORY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22754028	22756289	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=NA19239_ch_T0000528;gene_id=NA19239_ch_G0000194;Parent=NA19239_ch_T0000528;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=intron:NA19239_ch_T0000528:2;Name=PRORY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22756290	22756414	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=NA19239_ch_T0000528;gene_id=NA19239_ch_G0000194;Parent=NA19239_ch_T0000528;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:NA19239_ch_T0000528:3;Name=PRORY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22756415	22821702	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=NA19239_ch_T0000528;gene_id=NA19239_ch_G0000194;Parent=NA19239_ch_T0000528;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=intron:NA19239_ch_T0000528:3;Name=PRORY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22821703	22821905	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=NA19239_ch_T0000528;gene_id=NA19239_ch_G0000194;Parent=NA19239_ch_T0000528;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:NA19239_ch_T0000528:4;Name=PRORY;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	22765208	22771622	.	-	.	source_gene_common_name=RBMY2EP;source_gene=hg002_chrY_paternal_457;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;gene_id=NA19239_ch_G0000195;gene_biotype=transcribed_pseudogene;gene_name=RBMY2EP;gene_sources=liftoff;ID=NA19239_ch_G0000195;Name=RBMY2EP
NA19239_chrY	CAT	transcript	22765208	22771622	1000	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=NA19239_ch_T0000529;gene_id=NA19239_ch_G0000195;Parent=NA19239_ch_G0000195;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=NA19239_ch_T0000529;Name=RBMY2EP
NA19239_chrY	CAT	exon	22765208	22765351	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=NA19239_ch_T0000529;gene_id=NA19239_ch_G0000195;Parent=NA19239_ch_T0000529;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:NA19239_ch_T0000529:0;Name=RBMY2EP;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22765352	22765759	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=NA19239_ch_T0000529;gene_id=NA19239_ch_G0000195;Parent=NA19239_ch_T0000529;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=intron:NA19239_ch_T0000529:0;Name=RBMY2EP;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22765760	22765848	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=NA19239_ch_T0000529;gene_id=NA19239_ch_G0000195;Parent=NA19239_ch_T0000529;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:NA19239_ch_T0000529:1;Name=RBMY2EP;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22765849	22765930	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=NA19239_ch_T0000529;gene_id=NA19239_ch_G0000195;Parent=NA19239_ch_T0000529;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=intron:NA19239_ch_T0000529:1;Name=RBMY2EP;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22765931	22766041	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=NA19239_ch_T0000529;gene_id=NA19239_ch_G0000195;Parent=NA19239_ch_T0000529;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:NA19239_ch_T0000529:2;Name=RBMY2EP;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22766042	22770982	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=NA19239_ch_T0000529;gene_id=NA19239_ch_G0000195;Parent=NA19239_ch_T0000529;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=intron:NA19239_ch_T0000529:2;Name=RBMY2EP;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22770983	22771086	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=NA19239_ch_T0000529;gene_id=NA19239_ch_G0000195;Parent=NA19239_ch_T0000529;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:NA19239_ch_T0000529:3;Name=RBMY2EP;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22771087	22771536	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=NA19239_ch_T0000529;gene_id=NA19239_ch_G0000195;Parent=NA19239_ch_T0000529;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=intron:NA19239_ch_T0000529:3;Name=RBMY2EP;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22771537	22771622	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=NA19239_ch_T0000529;gene_id=NA19239_ch_G0000195;Parent=NA19239_ch_T0000529;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:NA19239_ch_T0000529:4;Name=RBMY2EP;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	22881396	22895842	.	+	.	source_gene_common_name=RBMY1A1;source_gene=hg002_chrY_paternal_462;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;gene_id=NA19239_ch_G0000196;gene_biotype=protein_coding;gene_name=RBMY1A1;gene_sources=liftoff,augTM;ID=NA19239_ch_G0000196;Name=RBMY1A1
NA19239_chrY	CAT	transcript	22881396	22894854	1000	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000530;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_G0000196;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=NA19239_ch_T0000530;Name=RBMY1A1
NA19239_chrY	CAT	exon	22881396	22881543	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000530;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000530;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000530:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22881544	22883404	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000530;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000530;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000530:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22883405	22883517	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000530;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000530;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000530:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22883409	22883517	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000530;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000530;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000530:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	22883409	22883411	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000530;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000530;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:NA19239_ch_T0000530;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22883518	22883989	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000530;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000530;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000530:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22883990	22884093	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000530;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000530;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000530:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22883990	22884093	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000530;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000530;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000530:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22884094	22887112	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000530;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000530;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000530:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22887113	22887290	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000530;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000530;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000530:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22887113	22887290	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000530;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000530;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000530:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22887291	22889205	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000530;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000530;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000530:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22889206	22889358	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000530;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000530;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000530:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22889206	22889358	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000530;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000530;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000530:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22889359	22891368	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000530;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000530;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000530:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22891369	22891483	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000530;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000530;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000530:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22891369	22891483	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000530;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000530;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000530:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22891484	22892438	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000530;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000530;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000530:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22892439	22892549	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000530;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000530;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000530:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22892439	22892549	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000530;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000530;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000530:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22892550	22892990	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000530;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000530;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000530:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22892991	22893101	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000530;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000530;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000530:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22892991	22893101	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000530;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000530;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000530:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22893102	22893535	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000530;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000530;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000530:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22893536	22893646	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000530;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000530;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000530:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22893536	22893646	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000530;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000530;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000530:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22893647	22894567	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000530;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000530;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000530:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22894568	22894678	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000530;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000530;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000530:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22894568	22894678	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000530;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000530;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000530:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22894679	22894765	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000530;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000530;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000530:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22894766	22894854	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000530;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000530;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000530:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22894766	22894853	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000530;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000530;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000530:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	22894851	22894853	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000530;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000530;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:NA19239_ch_T0000530;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	22881396	22895842	1000	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000531;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_G0000196;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=NA19239_ch_T0000531;Name=RBMY1A1
NA19239_chrY	CAT	exon	22881396	22881543	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000531;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000531;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000531:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22881544	22883404	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000531;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000531;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000531:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22883405	22883517	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000531;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000531;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000531:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22883409	22883517	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000531;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000531;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000531:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	22883409	22883411	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000531;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000531;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:NA19239_ch_T0000531;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22883518	22883989	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000531;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000531;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000531:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22883990	22884093	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000531;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000531;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000531:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22883990	22884093	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000531;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000531;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000531:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22884094	22887112	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000531;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000531;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000531:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22887113	22887290	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000531;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000531;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000531:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22887113	22887290	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000531;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000531;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000531:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22887291	22889205	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000531;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000531;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000531:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22889206	22889358	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000531;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000531;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000531:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22889206	22889358	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000531;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000531;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000531:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22889359	22891368	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000531;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000531;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000531:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22891369	22891483	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000531;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000531;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000531:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22891369	22891483	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000531;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000531;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000531:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22891484	22892438	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000531;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000531;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000531:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22892439	22892549	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000531;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000531;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000531:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22892439	22892549	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000531;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000531;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000531:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22892550	22892990	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000531;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000531;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000531:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22892991	22893101	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000531;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000531;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000531:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22892991	22893101	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000531;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000531;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000531:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22893102	22893535	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000531;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000531;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000531:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22893536	22893646	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000531;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000531;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000531:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22893536	22893646	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000531;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000531;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000531:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22893647	22894765	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000531;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000531;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000531:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22894766	22894854	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000531;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000531;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000531:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22894766	22894854	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000531;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000531;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000531:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22894855	22895265	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000531;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000531;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000531:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22895266	22895842	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000531;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000531;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000531:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22895266	22895564	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000531;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000531;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000531:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	22895562	22895564	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000531;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000531;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:NA19239_ch_T0000531;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	22881396	22895842	1000	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000532;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_G0000196;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=NA19239_ch_T0000532;Name=RBMY1A1
NA19239_chrY	CAT	exon	22881396	22881543	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000532;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000532:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22881544	22883404	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000532;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000532:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22883405	22883517	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000532;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000532:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22883518	22883989	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000532;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000532:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22883990	22884093	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000532;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000532:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22884094	22889205	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000532;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000532:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22889206	22889358	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000532;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000532:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22889235	22889358	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000532;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000532:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	22889235	22889237	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000532;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:NA19239_ch_T0000532;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22889359	22891368	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000532;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000532:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22891369	22891483	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000532;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000532:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22891369	22891483	.	+	2	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000532;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000532:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22891484	22892438	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000532;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000532:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22892439	22892549	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000532;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000532:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22892439	22892549	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000532;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000532:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22892550	22892990	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000532;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000532:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22892991	22893101	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000532;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000532:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22892991	22893101	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000532;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000532:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22893102	22893535	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000532;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000532:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22893536	22893646	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000532;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000532:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22893536	22893646	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000532;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000532:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22893647	22894567	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000532;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000532:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22894568	22894678	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000532;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000532:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22894568	22894678	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000532;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000532:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22894679	22894765	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000532;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000532:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22894766	22894854	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000532;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000532:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22894766	22894854	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000532;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000532:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22894855	22895265	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000532;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000532:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22895266	22895842	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000532;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000532:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22895266	22895564	.	+	2	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000532;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000532:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	22895562	22895564	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000532;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:NA19239_ch_T0000532;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	22881396	22895842	1000	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000533;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_G0000196;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=NA19239_ch_T0000533;Name=RBMY1A1
NA19239_chrY	CAT	exon	22881396	22881543	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000533;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000533:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22881544	22883404	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000533;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000533:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22883405	22883517	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000533;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000533:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22883409	22883517	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000533;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000533:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	22883409	22883411	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000533;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:NA19239_ch_T0000533;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22883518	22883989	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000533;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000533:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22883990	22884093	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000533;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000533:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22883990	22884093	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000533;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000533:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22884094	22887112	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000533;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000533:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22887113	22887290	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000533;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000533:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22887113	22887290	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000533;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000533:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22887291	22889205	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000533;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000533:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22889206	22889358	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000533;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000533:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22889206	22889358	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000533;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000533:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22889359	22891368	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000533;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000533:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22891369	22891483	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000533;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000533:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22891369	22891483	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000533;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000533:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22891484	22892438	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000533;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000533:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22892439	22892549	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000533;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000533:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22892439	22892549	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000533;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000533:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22892550	22892990	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000533;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000533:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22892991	22893101	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000533;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000533:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22892991	22893101	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000533;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000533:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22893102	22893535	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000533;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000533:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22893536	22893646	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000533;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000533:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22893536	22893646	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000533;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000533:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22893647	22894567	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000533;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000533:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22894568	22894678	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000533;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000533:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22894568	22894678	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000533;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000533:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22894679	22894765	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000533;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000533:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22894766	22894854	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000533;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000533:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22894766	22894854	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000533;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000533:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22894855	22895265	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000533;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000533:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22895266	22895842	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000533;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000533:11;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22895266	22895564	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000533;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000533:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	22895562	22895564	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000533;gene_id=NA19239_ch_G0000196;Parent=NA19239_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:NA19239_ch_T0000533;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	22898714	22931026	.	+	.	source_gene_common_name=RBMY1D;source_gene=hg002_chrY_paternal_463;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;gene_id=NA19239_ch_G0000197;gene_biotype=protein_coding;gene_name=RBMY1D;gene_sources=liftoff,augTM;ID=NA19239_ch_G0000197;Name=RBMY1D
NA19239_chrY	CAT	transcript	22898714	22919380	100	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000534;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_G0000197;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=NA19239_ch_T0000534;Name=RBMY1D
NA19239_chrY	CAT	exon	22898714	22898734	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000534;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000534;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000534:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22898735	22906942	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000534;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000534;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000534:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22906943	22907055	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000534;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000534;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000534:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22906947	22907055	.	+	0	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000534;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000534;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000534:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	22906947	22906949	.	+	0	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000534;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000534;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:NA19239_ch_T0000534;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22907056	22907527	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000534;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000534;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000534:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22907528	22907631	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000534;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000534;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000534:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22907528	22907631	.	+	2	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000534;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000534;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000534:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22907632	22910650	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000534;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000534;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000534:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22910651	22910828	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000534;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000534;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000534:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22910651	22910828	.	+	0	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000534;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000534;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000534:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22910829	22912743	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000534;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000534;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000534:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22912744	22912896	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000534;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000534;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000534:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22912744	22912896	.	+	2	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000534;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000534;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000534:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22912897	22914906	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000534;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000534;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000534:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22914907	22915021	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000534;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000534;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000534:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22914907	22915021	.	+	2	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000534;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000534;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000534:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22915022	22915976	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000534;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000534;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000534:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22915977	22916087	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000534;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000534;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000534:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22915977	22916087	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000534;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000534;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000534:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22916088	22916528	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000534;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000534;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000534:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22916529	22916639	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000534;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000534;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000534:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22916529	22916639	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000534;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000534;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000534:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22916640	22917073	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000534;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000534;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000534:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22917074	22917184	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000534;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000534;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000534:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22917074	22917184	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000534;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000534;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000534:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22917185	22918105	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000534;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000534;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000534:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22918106	22918216	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000534;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000534;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000534:9;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22918106	22918216	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000534;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000534;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000534:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22918217	22918303	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000534;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000534;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000534:9;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22918304	22918392	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000534;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000534;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000534:10;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22918304	22918392	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000534;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000534;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000534:9;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22918393	22918803	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000534;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000534;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000534:10;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22918804	22919380	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000534;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000534;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000534:11;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22918804	22919102	.	+	2	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000534;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000534;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000534:10;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	22919100	22919102	.	+	0	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000534;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000534;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:NA19239_ch_T0000534;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	22904934	22919380	100	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000535;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_G0000197;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=NA19239_ch_T0000535;Name=RBMY1D
NA19239_chrY	CAT	exon	22904934	22905081	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000535;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000535;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000535:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22905082	22906942	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000535;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000535;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000535:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22906943	22907055	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000535;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000535;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000535:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22906947	22907055	.	+	0	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000535;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000535;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000535:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	22906947	22906949	.	+	0	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000535;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000535;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:NA19239_ch_T0000535;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22907056	22907527	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000535;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000535;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000535:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22907528	22907631	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000535;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000535;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000535:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22907528	22907631	.	+	2	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000535;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000535;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000535:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22907632	22910650	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000535;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000535;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000535:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22910651	22910828	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000535;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000535;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000535:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22910651	22910828	.	+	0	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000535;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000535;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000535:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22910829	22912743	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000535;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000535;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000535:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22912744	22912896	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000535;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000535;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000535:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22912744	22912896	.	+	2	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000535;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000535;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000535:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22912897	22914906	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000535;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000535;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000535:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22914907	22915021	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000535;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000535;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000535:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22914907	22915021	.	+	2	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000535;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000535;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000535:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22915022	22915976	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000535;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000535;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000535:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22915977	22916087	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000535;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000535;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000535:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22915977	22916087	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000535;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000535;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000535:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22916088	22916528	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000535;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000535;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000535:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22916529	22916639	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000535;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000535;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000535:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22916529	22916639	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000535;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000535;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000535:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22916640	22917073	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000535;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000535;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000535:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22917074	22917184	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000535;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000535;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000535:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22917074	22917184	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000535;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000535;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000535:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22917185	22918105	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000535;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000535;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000535:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22918106	22918216	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000535;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000535;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000535:9;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22918106	22918216	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000535;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000535;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000535:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22918217	22918303	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000535;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000535;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000535:9;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22918304	22918392	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000535;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000535;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000535:10;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22918304	22918392	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000535;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000535;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000535:9;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22918393	22918803	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000535;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000535;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000535:10;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22918804	22919380	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000535;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000535;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000535:11;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22918804	22919102	.	+	2	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000535;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000535;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000535:10;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	22919100	22919102	.	+	0	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000535;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000535;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:NA19239_ch_T0000535;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	22904934	22919380	100	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000536;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_G0000197;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=NA19239_ch_T0000536;Name=RBMY1D
NA19239_chrY	CAT	exon	22904934	22905081	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000536;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000536;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000536:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22905082	22906942	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000536;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000536;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000536:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22906943	22907055	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000536;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000536;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000536:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22906947	22907055	.	+	0	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000536;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000536;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000536:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	22906947	22906949	.	+	0	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000536;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000536;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:NA19239_ch_T0000536;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22907056	22907527	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000536;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000536;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000536:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22907528	22907631	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000536;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000536;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000536:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22907528	22907631	.	+	2	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000536;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000536;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000536:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22907632	22910650	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000536;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000536;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000536:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22910651	22910828	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000536;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000536;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000536:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22910651	22910828	.	+	0	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000536;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000536;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000536:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22910829	22912743	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000536;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000536;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000536:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22912744	22912896	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000536;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000536;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000536:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22912744	22912896	.	+	2	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000536;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000536;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000536:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22912897	22914906	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000536;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000536;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000536:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22914907	22915021	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000536;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000536;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000536:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22914907	22915021	.	+	2	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000536;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000536;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000536:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22915022	22915976	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000536;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000536;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000536:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22915977	22916087	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000536;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000536;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000536:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22915977	22916087	.	+	1	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000536;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000536;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000536:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22916088	22916528	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000536;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000536;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000536:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22916529	22916639	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000536;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000536;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000536:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22916529	22916639	.	+	1	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000536;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000536;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000536:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22916640	22917073	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000536;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000536;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000536:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22917074	22917184	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000536;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000536;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000536:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22917074	22917184	.	+	1	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000536;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000536;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000536:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22917185	22918303	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000536;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000536;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000536:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22918304	22918392	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000536;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000536;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000536:9;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22918304	22918392	.	+	1	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000536;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000536;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000536:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22918393	22918803	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000536;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000536;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000536:9;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22918804	22919380	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000536;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000536;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000536:10;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22918804	22919102	.	+	2	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000536;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000536;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000536:9;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	22919100	22919102	.	+	0	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000536;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000536;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:NA19239_ch_T0000536;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	22904934	22919380	100	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000537;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_G0000197;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=NA19239_ch_T0000537;Name=RBMY1D
NA19239_chrY	CAT	exon	22904934	22905081	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000537;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000537;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000537:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22905082	22905754	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000537;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000537;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000537:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22905755	22905819	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000537;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000537;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000537:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22905820	22906942	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000537;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000537;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000537:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22906943	22907055	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000537;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000537;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000537:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22907005	22907055	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000537;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000537;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000537:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	22907005	22907007	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000537;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000537;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:NA19239_ch_T0000537;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22907056	22907541	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000537;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000537;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000537:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22907542	22907631	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000537;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000537;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000537:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22907542	22907631	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000537;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000537;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000537:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22907632	22910650	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000537;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000537;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000537:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22910651	22910828	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000537;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000537;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000537:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22910651	22910828	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000537;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000537;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000537:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22910829	22912743	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000537;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000537;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000537:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22912744	22912896	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000537;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000537;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000537:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22912744	22912896	.	+	2	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000537;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000537;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000537:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22912897	22914906	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000537;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000537;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000537:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22914907	22915021	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000537;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000537;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000537:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22914907	22915021	.	+	2	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000537;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000537;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000537:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22915022	22915976	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000537;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000537;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000537:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22915977	22916087	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000537;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000537;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000537:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22915977	22916087	.	+	1	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000537;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000537;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000537:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22916088	22916528	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000537;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000537;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000537:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22916529	22916639	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000537;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000537;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000537:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22916529	22916639	.	+	1	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000537;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000537;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000537:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22916640	22917073	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000537;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000537;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000537:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22917074	22917184	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000537;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000537;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000537:9;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22917074	22917184	.	+	1	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000537;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000537;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000537:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22917185	22918303	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000537;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000537;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000537:9;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22918304	22918392	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000537;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000537;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000537:10;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22918304	22918392	.	+	1	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000537;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000537;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000537:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22918393	22918803	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000537;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000537;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000537:10;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22918804	22919380	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000537;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000537;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000537:11;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22918804	22919102	.	+	2	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000537;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000537;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000537:9;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	22919100	22919102	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000537;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000537;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:NA19239_ch_T0000537;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	22904934	22919380	100	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000538;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_G0000197;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=NA19239_ch_T0000538;Name=RBMY1D
NA19239_chrY	CAT	exon	22904934	22905081	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000538;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000538;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000538:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22905082	22906942	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000538;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000538;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000538:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22906943	22907055	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000538;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000538;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000538:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22906947	22907055	.	+	0	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000538;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000538;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000538:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	22906947	22906949	.	+	0	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000538;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000538;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:NA19239_ch_T0000538;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22907056	22907527	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000538;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000538;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000538:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22907528	22907631	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000538;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000538;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000538:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22907528	22907631	.	+	2	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000538;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000538;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000538:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22907632	22910650	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000538;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000538;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000538:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22910651	22910828	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000538;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000538;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000538:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22910651	22910828	.	+	0	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000538;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000538;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000538:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22910829	22912743	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000538;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000538;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000538:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22912744	22912896	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000538;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000538;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000538:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22912744	22912896	.	+	2	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000538;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000538;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000538:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22912897	22914906	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000538;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000538;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000538:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22914907	22915021	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000538;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000538;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000538:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22914907	22915021	.	+	2	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000538;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000538;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000538:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22915022	22915976	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000538;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000538;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000538:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22915977	22916087	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000538;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000538;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000538:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22915977	22916087	.	+	1	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000538;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000538;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000538:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22916088	22918303	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000538;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000538;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000538:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22918304	22918392	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000538;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000538;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000538:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22918304	22918392	.	+	1	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000538;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000538;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000538:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22918393	22918803	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000538;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000538;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000538:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22918804	22919380	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000538;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000538;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000538:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22918804	22919102	.	+	2	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000538;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000538;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000538:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	22919100	22919102	.	+	0	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000538;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000538;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:NA19239_ch_T0000538;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	22904934	22920798	100	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000539;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_G0000197;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=NA19239_ch_T0000539;Name=RBMY1D
NA19239_chrY	CAT	exon	22904934	22905081	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000539;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000539;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000539:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22905082	22906942	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000539;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000539;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000539:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22906943	22907055	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000539;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000539;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000539:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22906947	22907055	.	+	0	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000539;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000539;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000539:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	22906947	22906949	.	+	0	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000539;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000539;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:NA19239_ch_T0000539;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22907056	22907527	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000539;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000539;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000539:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22907528	22907631	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000539;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000539;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000539:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22907528	22907631	.	+	2	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000539;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000539;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000539:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22907632	22910650	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000539;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000539;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000539:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22910651	22910828	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000539;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000539;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000539:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22910651	22910828	.	+	0	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000539;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000539;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000539:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22910829	22912743	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000539;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000539;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000539:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22912744	22912896	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000539;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000539;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000539:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22912744	22912896	.	+	2	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000539;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000539;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000539:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22912897	22914906	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000539;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000539;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000539:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22914907	22915021	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000539;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000539;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000539:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22914907	22915021	.	+	2	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000539;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000539;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000539:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22915022	22915976	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000539;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000539;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000539:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22915977	22916087	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000539;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000539;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000539:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22915977	22916087	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000539;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000539;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000539:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22916088	22916528	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000539;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000539;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000539:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22916529	22916639	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000539;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000539;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000539:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22916529	22916639	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000539;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000539;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000539:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22916640	22917073	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000539;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000539;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000539:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22917074	22917184	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000539;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000539;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000539:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22917074	22917184	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000539;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000539;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000539:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22917185	22918105	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000539;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000539;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000539:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22918106	22918216	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000539;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000539;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000539:9;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22918106	22918216	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000539;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000539;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000539:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22918217	22918303	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000539;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000539;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000539:9;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22918304	22918392	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000539;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000539;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000539:10;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22918304	22918392	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000539;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000539;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000539:9;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22918393	22919639	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000539;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000539;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000539:10;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22919640	22920798	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000539;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000539;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000539:11;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22919640	22919647	.	+	2	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000539;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000539;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000539:10;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	22919645	22919647	.	+	0	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000539;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000539;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:NA19239_ch_T0000539;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	22904934	22931026	100	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000540;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_G0000197;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=NA19239_ch_T0000540;Name=RBMY1D
NA19239_chrY	CAT	exon	22904934	22905081	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000540;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000540;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000540:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22905082	22906942	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000540;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000540;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000540:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22906943	22907055	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000540;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000540;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000540:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22906947	22907055	.	+	0	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000540;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000540;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000540:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	22906947	22906949	.	+	0	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000540;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000540;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:NA19239_ch_T0000540;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22907056	22907527	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000540;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000540;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000540:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22907528	22907631	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000540;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000540;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000540:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22907528	22907631	.	+	2	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000540;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000540;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000540:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22907632	22910650	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000540;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000540;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000540:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22910651	22910828	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000540;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000540;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000540:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22910651	22910828	.	+	0	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000540;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000540;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000540:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22910829	22912743	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000540;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000540;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000540:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22912744	22912896	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000540;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000540;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000540:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22912744	22912896	.	+	2	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000540;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000540;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000540:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22912897	22914906	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000540;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000540;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000540:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22914907	22915021	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000540;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000540;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000540:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22914907	22915021	.	+	2	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000540;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000540;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000540:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22915022	22915976	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000540;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000540;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000540:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22915977	22916087	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000540;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000540;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000540:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22915977	22916087	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000540;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000540;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000540:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22916088	22916528	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000540;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000540;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000540:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22916529	22916639	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000540;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000540;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000540:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22916529	22916639	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000540;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000540;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000540:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22916640	22917073	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000540;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000540;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000540:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22917074	22917184	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000540;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000540;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000540:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22917074	22917184	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000540;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000540;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000540:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22917185	22918105	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000540;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000540;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000540:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22918106	22918216	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000540;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000540;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000540:9;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22918106	22918216	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000540;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000540;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000540:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22918217	22918303	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000540;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000540;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000540:9;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22918304	22918392	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000540;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000540;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000540:10;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22918304	22918392	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000540;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000540;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000540:9;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22918393	22929642	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000540;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000540;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000540:10;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22929643	22931026	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000540;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000540;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000540:11;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22929643	22929719	.	+	2	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000540;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000540;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000540:10;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	22929717	22929719	.	+	0	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000540;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000540;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:NA19239_ch_T0000540;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	22907542	22919380	100	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000541;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_G0000197;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=NA19239_ch_T0000541;Name=RBMY1D
NA19239_chrY	CAT	exon	22907542	22907631	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000541;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000541;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000541:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22907632	22912743	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000541;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000541;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000541:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22912744	22912896	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000541;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000541;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000541:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22912773	22912896	.	+	0	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000541;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000541;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000541:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	22912773	22912775	.	+	0	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000541;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000541;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:NA19239_ch_T0000541;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22912897	22914906	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000541;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000541;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000541:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22914907	22915021	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000541;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000541;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000541:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22914907	22915021	.	+	2	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000541;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000541;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000541:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22915022	22915976	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000541;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000541;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000541:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22915977	22916087	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000541;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000541;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000541:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22915977	22916087	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000541;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000541;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000541:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22916088	22916528	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000541;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000541;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000541:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22916529	22916639	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000541;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000541;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000541:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22916529	22916639	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000541;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000541;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000541:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22916640	22917073	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000541;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000541;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000541:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22917074	22917184	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000541;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000541;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000541:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22917074	22917184	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000541;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000541;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000541:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22917185	22918105	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000541;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000541;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000541:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22918106	22918216	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000541;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000541;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000541:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22918106	22918216	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000541;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000541;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000541:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22918217	22918303	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000541;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000541;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000541:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22918304	22918392	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000541;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000541;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000541:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22918304	22918392	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000541;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000541;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000541:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22918393	22918803	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000541;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000541;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19239_ch_T0000541:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22918804	22919380	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000541;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000541;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19239_ch_T0000541:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	22918804	22919102	.	+	2	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000541;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000541;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19239_ch_T0000541:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	22919100	22919102	.	+	0	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000541;gene_id=NA19239_ch_G0000197;Parent=NA19239_ch_T0000541;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:NA19239_ch_T0000541;Name=RBMY1D;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	22939084	22941336	.	-	.	source_gene_common_name=LOC105379266;source_gene=hg002_chrY_paternal_465;alternative_source_transcripts=hg002_chrY_paternal_465.1;gene_id=NA19239_ch_G0000198;gene_biotype=lncRNA;gene_name=LOC105379266;gene_sources=liftoff,transMap;ID=NA19239_ch_G0000198;Name=LOC105379266
NA19239_chrY	CAT	transcript	22939084	22941336	1000	-	.	source_transcript=hg002_chrY_paternal_465.1;source_transcript_name=hg002_chrY_paternal_465.1;source_gene=hg002_chrY_paternal_465;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_465;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_465.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_465.1;transcript_score=299.933;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_465.1;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000542;gene_id=NA19239_ch_G0000198;Parent=NA19239_ch_G0000198;transcript_name=hg002_chrY_paternal_465.1;gene_name=LOC105379266;ID=NA19239_ch_T0000542;Name=LOC105379266
NA19239_chrY	CAT	exon	22939084	22940364	.	-	.	source_transcript=hg002_chrY_paternal_465.1;source_transcript_name=hg002_chrY_paternal_465.1;source_gene=hg002_chrY_paternal_465;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_465;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_465.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_465.1;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_465.1;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000542;gene_id=NA19239_ch_G0000198;Parent=NA19239_ch_T0000542;transcript_name=hg002_chrY_paternal_465.1;gene_name=LOC105379266;ID=exon:NA19239_ch_T0000542:0;Name=LOC105379266;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22940365	22941041	.	-	.	source_transcript=hg002_chrY_paternal_465.1;source_transcript_name=hg002_chrY_paternal_465.1;source_gene=hg002_chrY_paternal_465;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_465;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_465.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_465.1;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_465.1;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000542;gene_id=NA19239_ch_G0000198;Parent=NA19239_ch_T0000542;transcript_name=hg002_chrY_paternal_465.1;gene_name=LOC105379266;ID=intron:NA19239_ch_T0000542:0;Name=LOC105379266;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22941042	22941336	.	-	.	source_transcript=hg002_chrY_paternal_465.1;source_transcript_name=hg002_chrY_paternal_465.1;source_gene=hg002_chrY_paternal_465;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_465;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_465.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_465.1;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_465.1;AdditionalSources=liftoff;transcript_id=NA19239_ch_T0000542;gene_id=NA19239_ch_G0000198;Parent=NA19239_ch_T0000542;transcript_name=hg002_chrY_paternal_465.1;gene_name=LOC105379266;ID=exon:NA19239_ch_T0000542:1;Name=LOC105379266;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	22953643	22964710	.	-	.	source_gene_common_name=TTTY13;source_gene=hg002_chrY_paternal_466;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;gene_id=NA19239_ch_G0000199;gene_biotype=lncRNA;gene_name=TTTY13;gene_sources=liftoff;ID=NA19239_ch_G0000199;Name=TTTY13
NA19239_chrY	CAT	transcript	22953643	22964710	1000	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=NA19239_ch_T0000543;gene_id=NA19239_ch_G0000199;Parent=NA19239_ch_G0000199;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=NA19239_ch_T0000543;Name=TTTY13
NA19239_chrY	CAT	exon	22953643	22953705	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=NA19239_ch_T0000543;gene_id=NA19239_ch_G0000199;Parent=NA19239_ch_T0000543;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:NA19239_ch_T0000543:0;Name=TTTY13;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22953706	22954825	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=NA19239_ch_T0000543;gene_id=NA19239_ch_G0000199;Parent=NA19239_ch_T0000543;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:NA19239_ch_T0000543:0;Name=TTTY13;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22954826	22954917	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=NA19239_ch_T0000543;gene_id=NA19239_ch_G0000199;Parent=NA19239_ch_T0000543;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:NA19239_ch_T0000543:1;Name=TTTY13;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22954918	22957543	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=NA19239_ch_T0000543;gene_id=NA19239_ch_G0000199;Parent=NA19239_ch_T0000543;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:NA19239_ch_T0000543:1;Name=TTTY13;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22957544	22957705	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=NA19239_ch_T0000543;gene_id=NA19239_ch_G0000199;Parent=NA19239_ch_T0000543;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:NA19239_ch_T0000543:2;Name=TTTY13;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22957706	22959314	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=NA19239_ch_T0000543;gene_id=NA19239_ch_G0000199;Parent=NA19239_ch_T0000543;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:NA19239_ch_T0000543:2;Name=TTTY13;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22959315	22959413	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=NA19239_ch_T0000543;gene_id=NA19239_ch_G0000199;Parent=NA19239_ch_T0000543;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:NA19239_ch_T0000543:3;Name=TTTY13;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22959414	22960008	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=NA19239_ch_T0000543;gene_id=NA19239_ch_G0000199;Parent=NA19239_ch_T0000543;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:NA19239_ch_T0000543:3;Name=TTTY13;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22960009	22960170	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=NA19239_ch_T0000543;gene_id=NA19239_ch_G0000199;Parent=NA19239_ch_T0000543;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:NA19239_ch_T0000543:4;Name=TTTY13;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	22960171	22964629	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=NA19239_ch_T0000543;gene_id=NA19239_ch_G0000199;Parent=NA19239_ch_T0000543;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:NA19239_ch_T0000543:4;Name=TTTY13;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	22964630	22964710	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=NA19239_ch_T0000543;gene_id=NA19239_ch_G0000199;Parent=NA19239_ch_T0000543;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:NA19239_ch_T0000543:5;Name=TTTY13;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	23139448	23154101	.	-	.	source_gene_common_name=LOC105377236;source_gene=hg002_chrY_paternal_472;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;gene_id=NA19239_ch_G0000200;gene_biotype=lncRNA;gene_name=LOC105377236;gene_sources=liftoff;ID=NA19239_ch_G0000200;Name=LOC105377236
NA19239_chrY	CAT	transcript	23139448	23152873	1000	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=NA19239_ch_T0000544;gene_id=NA19239_ch_G0000200;Parent=NA19239_ch_G0000200;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=NA19239_ch_T0000544;Name=LOC105377236
NA19239_chrY	CAT	exon	23139448	23140991	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=NA19239_ch_T0000544;gene_id=NA19239_ch_G0000200;Parent=NA19239_ch_T0000544;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:NA19239_ch_T0000544:0;Name=LOC105377236;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23140992	23148370	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=NA19239_ch_T0000544;gene_id=NA19239_ch_G0000200;Parent=NA19239_ch_T0000544;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:NA19239_ch_T0000544:0;Name=LOC105377236;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23148371	23148506	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=NA19239_ch_T0000544;gene_id=NA19239_ch_G0000200;Parent=NA19239_ch_T0000544;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:NA19239_ch_T0000544:1;Name=LOC105377236;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23148507	23151502	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=NA19239_ch_T0000544;gene_id=NA19239_ch_G0000200;Parent=NA19239_ch_T0000544;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:NA19239_ch_T0000544:1;Name=LOC105377236;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23151503	23151664	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=NA19239_ch_T0000544;gene_id=NA19239_ch_G0000200;Parent=NA19239_ch_T0000544;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:NA19239_ch_T0000544:2;Name=LOC105377236;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23151665	23151908	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=NA19239_ch_T0000544;gene_id=NA19239_ch_G0000200;Parent=NA19239_ch_T0000544;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:NA19239_ch_T0000544:2;Name=LOC105377236;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23151909	23152873	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=NA19239_ch_T0000544;gene_id=NA19239_ch_G0000200;Parent=NA19239_ch_T0000544;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:NA19239_ch_T0000544:3;Name=LOC105377236;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	23139448	23152873	1000	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=NA19239_ch_T0000545;gene_id=NA19239_ch_G0000200;Parent=NA19239_ch_G0000200;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=NA19239_ch_T0000545;Name=LOC105377236
NA19239_chrY	CAT	exon	23139448	23140991	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=NA19239_ch_T0000545;gene_id=NA19239_ch_G0000200;Parent=NA19239_ch_T0000545;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:NA19239_ch_T0000545:0;Name=LOC105377236;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23140992	23148370	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=NA19239_ch_T0000545;gene_id=NA19239_ch_G0000200;Parent=NA19239_ch_T0000545;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:NA19239_ch_T0000545:0;Name=LOC105377236;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23148371	23148506	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=NA19239_ch_T0000545;gene_id=NA19239_ch_G0000200;Parent=NA19239_ch_T0000545;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:NA19239_ch_T0000545:1;Name=LOC105377236;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23148507	23151502	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=NA19239_ch_T0000545;gene_id=NA19239_ch_G0000200;Parent=NA19239_ch_T0000545;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:NA19239_ch_T0000545:1;Name=LOC105377236;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23151503	23151577	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=NA19239_ch_T0000545;gene_id=NA19239_ch_G0000200;Parent=NA19239_ch_T0000545;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:NA19239_ch_T0000545:2;Name=LOC105377236;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23151578	23151908	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=NA19239_ch_T0000545;gene_id=NA19239_ch_G0000200;Parent=NA19239_ch_T0000545;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:NA19239_ch_T0000545:2;Name=LOC105377236;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23151909	23152873	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=NA19239_ch_T0000545;gene_id=NA19239_ch_G0000200;Parent=NA19239_ch_T0000545;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:NA19239_ch_T0000545:3;Name=LOC105377236;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	23139448	23154101	1000	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=NA19239_ch_T0000546;gene_id=NA19239_ch_G0000200;Parent=NA19239_ch_G0000200;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=NA19239_ch_T0000546;Name=LOC105377236
NA19239_chrY	CAT	exon	23139448	23140991	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=NA19239_ch_T0000546;gene_id=NA19239_ch_G0000200;Parent=NA19239_ch_T0000546;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:NA19239_ch_T0000546:0;Name=LOC105377236;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23140992	23148370	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=NA19239_ch_T0000546;gene_id=NA19239_ch_G0000200;Parent=NA19239_ch_T0000546;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:NA19239_ch_T0000546:0;Name=LOC105377236;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23148371	23148506	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=NA19239_ch_T0000546;gene_id=NA19239_ch_G0000200;Parent=NA19239_ch_T0000546;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:NA19239_ch_T0000546:1;Name=LOC105377236;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23148507	23151502	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=NA19239_ch_T0000546;gene_id=NA19239_ch_G0000200;Parent=NA19239_ch_T0000546;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:NA19239_ch_T0000546:1;Name=LOC105377236;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23151503	23151664	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=NA19239_ch_T0000546;gene_id=NA19239_ch_G0000200;Parent=NA19239_ch_T0000546;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:NA19239_ch_T0000546:2;Name=LOC105377236;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23151665	23151908	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=NA19239_ch_T0000546;gene_id=NA19239_ch_G0000200;Parent=NA19239_ch_T0000546;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:NA19239_ch_T0000546:2;Name=LOC105377236;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23151909	23152694	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=NA19239_ch_T0000546;gene_id=NA19239_ch_G0000200;Parent=NA19239_ch_T0000546;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:NA19239_ch_T0000546:3;Name=LOC105377236;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23152695	23153945	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=NA19239_ch_T0000546;gene_id=NA19239_ch_G0000200;Parent=NA19239_ch_T0000546;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:NA19239_ch_T0000546:3;Name=LOC105377236;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23153946	23154101	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=NA19239_ch_T0000546;gene_id=NA19239_ch_G0000200;Parent=NA19239_ch_T0000546;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:NA19239_ch_T0000546:4;Name=LOC105377236;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	23166564	23169452	.	+	.	source_gene_common_name=LOC105377237;source_gene=hg002_chrY_paternal_474;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;gene_id=NA19239_ch_G0000201;gene_biotype=lncRNA;gene_name=LOC105377237;gene_sources=liftoff;ID=NA19239_ch_G0000201;Name=LOC105377237
NA19239_chrY	CAT	transcript	23166564	23169452	1000	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=NA19239_ch_T0000547;gene_id=NA19239_ch_G0000201;Parent=NA19239_ch_G0000201;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=NA19239_ch_T0000547;Name=LOC105377237
NA19239_chrY	CAT	exon	23166564	23167801	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=NA19239_ch_T0000547;gene_id=NA19239_ch_G0000201;Parent=NA19239_ch_T0000547;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=exon:NA19239_ch_T0000547:0;Name=LOC105377237;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23167802	23168973	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=NA19239_ch_T0000547;gene_id=NA19239_ch_G0000201;Parent=NA19239_ch_T0000547;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=intron:NA19239_ch_T0000547:0;Name=LOC105377237;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23168974	23169133	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=NA19239_ch_T0000547;gene_id=NA19239_ch_G0000201;Parent=NA19239_ch_T0000547;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=exon:NA19239_ch_T0000547:1;Name=LOC105377237;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23169134	23169293	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=NA19239_ch_T0000547;gene_id=NA19239_ch_G0000201;Parent=NA19239_ch_T0000547;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=intron:NA19239_ch_T0000547:1;Name=LOC105377237;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23169294	23169452	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=NA19239_ch_T0000547;gene_id=NA19239_ch_G0000201;Parent=NA19239_ch_T0000547;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=exon:NA19239_ch_T0000547:2;Name=LOC105377237;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	23210368	23224815	.	-	.	source_gene_common_name=RBMY1A1;source_gene=hg002_chrY_paternal_462;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;gene_id=NA19239_ch_G0000202;gene_biotype=protein_coding;gene_name=RBMY1A1;gene_sources=liftoff;ID=NA19239_ch_G0000202;Name=RBMY1A1
NA19239_chrY	CAT	transcript	23210368	23224815	1000	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19239_ch_T0000548;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_G0000202;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=NA19239_ch_T0000548;Name=RBMY1A1
NA19239_chrY	CAT	exon	23210368	23210944	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19239_ch_T0000548;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000548;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000548:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23210646	23210944	.	-	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19239_ch_T0000548;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000548;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000548:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	23210646	23210648	.	-	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19239_ch_T0000548;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000548;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:NA19239_ch_T0000548;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23210945	23211355	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19239_ch_T0000548;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000548;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000548:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23211356	23211444	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19239_ch_T0000548;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000548;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000548:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23211356	23211444	.	-	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19239_ch_T0000548;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000548;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000548:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23211445	23212562	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19239_ch_T0000548;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000548;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000548:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23212563	23212673	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19239_ch_T0000548;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000548;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000548:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23212563	23212673	.	-	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19239_ch_T0000548;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000548;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000548:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23212674	23213107	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19239_ch_T0000548;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000548;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000548:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23213108	23213218	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19239_ch_T0000548;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000548;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000548:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23213108	23213218	.	-	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19239_ch_T0000548;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000548;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000548:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23213219	23213659	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19239_ch_T0000548;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000548;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000548:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23213660	23213770	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19239_ch_T0000548;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000548;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000548:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23213660	23213770	.	-	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19239_ch_T0000548;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000548;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000548:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23213771	23214725	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19239_ch_T0000548;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000548;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000548:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23214726	23214840	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19239_ch_T0000548;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000548;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000548:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23214726	23214840	.	-	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19239_ch_T0000548;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000548;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000548:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23214841	23216850	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19239_ch_T0000548;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000548;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000548:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23216851	23217003	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19239_ch_T0000548;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000548;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000548:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23216851	23217003	.	-	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19239_ch_T0000548;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000548;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000548:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23217004	23218918	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19239_ch_T0000548;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000548;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000548:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23218919	23219096	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19239_ch_T0000548;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000548;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000548:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23218919	23219096	.	-	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19239_ch_T0000548;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000548;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000548:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23219097	23222115	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19239_ch_T0000548;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000548;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000548:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23222116	23222219	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19239_ch_T0000548;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000548;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000548:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23222116	23222219	.	-	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19239_ch_T0000548;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000548;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000548:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23222220	23222693	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19239_ch_T0000548;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000548;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000548:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23222694	23222806	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19239_ch_T0000548;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000548;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000548:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23222694	23222802	.	-	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19239_ch_T0000548;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000548;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000548:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23222800	23222802	.	-	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19239_ch_T0000548;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000548;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:NA19239_ch_T0000548;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23222807	23224667	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19239_ch_T0000548;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000548;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000548:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23224668	23224815	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19239_ch_T0000548;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000548;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000548:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	23210368	23224815	1000	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19239_ch_T0000549;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_G0000202;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=NA19239_ch_T0000549;Name=RBMY1A1
NA19239_chrY	CAT	exon	23210368	23210944	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19239_ch_T0000549;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000549;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000549:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23210646	23210944	.	-	2	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19239_ch_T0000549;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000549;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000549:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	23210646	23210648	.	-	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19239_ch_T0000549;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000549;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:NA19239_ch_T0000549;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23210945	23211355	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19239_ch_T0000549;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000549;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000549:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23211356	23211444	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19239_ch_T0000549;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000549;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000549:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23211356	23211444	.	-	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19239_ch_T0000549;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000549;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000549:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23211445	23211530	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19239_ch_T0000549;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000549;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000549:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23211531	23211641	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19239_ch_T0000549;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000549;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000549:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23211531	23211641	.	-	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19239_ch_T0000549;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000549;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000549:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23211642	23212562	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19239_ch_T0000549;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000549;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000549:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23212563	23212673	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19239_ch_T0000549;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000549;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000549:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23212563	23212673	.	-	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19239_ch_T0000549;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000549;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000549:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23212674	23213107	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19239_ch_T0000549;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000549;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000549:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23213108	23213218	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19239_ch_T0000549;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000549;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000549:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23213108	23213218	.	-	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19239_ch_T0000549;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000549;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000549:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23213219	23213659	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19239_ch_T0000549;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000549;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000549:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23213660	23213770	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19239_ch_T0000549;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000549;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000549:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23213660	23213770	.	-	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19239_ch_T0000549;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000549;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000549:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23213771	23214725	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19239_ch_T0000549;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000549;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000549:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23214726	23214840	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19239_ch_T0000549;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000549;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000549:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23214726	23214840	.	-	2	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19239_ch_T0000549;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000549;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000549:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23214841	23216850	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19239_ch_T0000549;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000549;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000549:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23216851	23217003	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19239_ch_T0000549;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000549;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000549:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23216851	23216974	.	-	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19239_ch_T0000549;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000549;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000549:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23216972	23216974	.	-	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19239_ch_T0000549;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000549;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:NA19239_ch_T0000549;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23217004	23222115	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19239_ch_T0000549;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000549;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000549:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23222116	23222219	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19239_ch_T0000549;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000549;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000549:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23222220	23222693	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19239_ch_T0000549;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000549;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000549:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23222694	23222806	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19239_ch_T0000549;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000549;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000549:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23222807	23224667	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19239_ch_T0000549;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000549;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000549:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23224668	23224815	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19239_ch_T0000549;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000549;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000549:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	23210368	23224815	1000	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19239_ch_T0000550;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_G0000202;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=NA19239_ch_T0000550;Name=RBMY1A1
NA19239_chrY	CAT	exon	23210368	23210944	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19239_ch_T0000550;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000550;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000550:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23210646	23210944	.	-	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19239_ch_T0000550;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000550;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000550:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	23210646	23210648	.	-	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19239_ch_T0000550;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000550;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:NA19239_ch_T0000550;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23210945	23211355	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19239_ch_T0000550;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000550;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000550:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23211356	23211444	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19239_ch_T0000550;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000550;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000550:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23211356	23211444	.	-	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19239_ch_T0000550;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000550;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000550:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23211445	23211530	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19239_ch_T0000550;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000550;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000550:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23211531	23211641	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19239_ch_T0000550;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000550;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000550:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23211531	23211641	.	-	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19239_ch_T0000550;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000550;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000550:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23211642	23212562	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19239_ch_T0000550;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000550;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000550:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23212563	23212673	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19239_ch_T0000550;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000550;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000550:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23212563	23212673	.	-	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19239_ch_T0000550;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000550;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000550:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23212674	23213107	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19239_ch_T0000550;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000550;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000550:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23213108	23213218	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19239_ch_T0000550;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000550;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000550:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23213108	23213218	.	-	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19239_ch_T0000550;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000550;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000550:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23213219	23213659	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19239_ch_T0000550;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000550;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000550:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23213660	23213770	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19239_ch_T0000550;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000550;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000550:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23213660	23213770	.	-	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19239_ch_T0000550;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000550;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000550:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23213771	23214725	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19239_ch_T0000550;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000550;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000550:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23214726	23214840	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19239_ch_T0000550;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000550;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000550:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23214726	23214840	.	-	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19239_ch_T0000550;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000550;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000550:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23214841	23216850	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19239_ch_T0000550;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000550;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000550:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23216851	23217003	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19239_ch_T0000550;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000550;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000550:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23216851	23217003	.	-	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19239_ch_T0000550;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000550;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000550:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23217004	23218918	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19239_ch_T0000550;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000550;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000550:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23218919	23219096	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19239_ch_T0000550;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000550;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000550:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23218919	23219096	.	-	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19239_ch_T0000550;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000550;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000550:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23219097	23222115	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19239_ch_T0000550;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000550;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000550:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23222116	23222219	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19239_ch_T0000550;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000550;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000550:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23222116	23222219	.	-	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19239_ch_T0000550;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000550;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000550:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23222220	23222693	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19239_ch_T0000550;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000550;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000550:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23222694	23222806	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19239_ch_T0000550;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000550;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000550:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23222694	23222802	.	-	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19239_ch_T0000550;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000550;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000550:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23222800	23222802	.	-	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19239_ch_T0000550;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000550;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:NA19239_ch_T0000550;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23222807	23224667	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19239_ch_T0000550;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000550;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000550:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23224668	23224815	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19239_ch_T0000550;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000550;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000550:11;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	23211356	23224815	1000	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19239_ch_T0000551;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_G0000202;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=NA19239_ch_T0000551;Name=RBMY1A1
NA19239_chrY	CAT	exon	23211356	23211444	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19239_ch_T0000551;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000551;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000551:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23211357	23211444	.	-	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19239_ch_T0000551;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000551;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000551:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	23211357	23211359	.	-	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19239_ch_T0000551;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000551;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:NA19239_ch_T0000551;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23211445	23211530	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19239_ch_T0000551;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000551;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000551:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23211531	23211641	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19239_ch_T0000551;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000551;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000551:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23211531	23211641	.	-	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19239_ch_T0000551;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000551;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000551:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23211642	23212562	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19239_ch_T0000551;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000551;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000551:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23212563	23212673	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19239_ch_T0000551;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000551;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000551:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23212563	23212673	.	-	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19239_ch_T0000551;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000551;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000551:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23212674	23213107	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19239_ch_T0000551;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000551;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000551:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23213108	23213218	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19239_ch_T0000551;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000551;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000551:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23213108	23213218	.	-	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19239_ch_T0000551;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000551;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000551:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23213219	23213659	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19239_ch_T0000551;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000551;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000551:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23213660	23213770	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19239_ch_T0000551;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000551;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000551:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23213660	23213770	.	-	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19239_ch_T0000551;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000551;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000551:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23213771	23214725	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19239_ch_T0000551;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000551;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000551:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23214726	23214840	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19239_ch_T0000551;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000551;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000551:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23214726	23214840	.	-	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19239_ch_T0000551;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000551;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000551:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23214841	23216850	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19239_ch_T0000551;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000551;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000551:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23216851	23217003	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19239_ch_T0000551;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000551;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000551:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23216851	23217003	.	-	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19239_ch_T0000551;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000551;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000551:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23217004	23218918	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19239_ch_T0000551;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000551;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000551:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23218919	23219096	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19239_ch_T0000551;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000551;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000551:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23218919	23219096	.	-	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19239_ch_T0000551;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000551;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000551:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23219097	23222115	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19239_ch_T0000551;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000551;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000551:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23222116	23222219	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19239_ch_T0000551;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000551;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000551:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23222116	23222219	.	-	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19239_ch_T0000551;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000551;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000551:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23222220	23222693	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19239_ch_T0000551;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000551;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000551:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23222694	23222806	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19239_ch_T0000551;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000551;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000551:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23222694	23222802	.	-	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19239_ch_T0000551;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000551;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000551:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23222800	23222802	.	-	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19239_ch_T0000551;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000551;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:NA19239_ch_T0000551;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23222807	23224667	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19239_ch_T0000551;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000551;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000551:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23224668	23224815	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19239_ch_T0000551;gene_id=NA19239_ch_G0000202;Parent=NA19239_ch_T0000551;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000551:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	23251220	23267070	.	-	.	source_gene_common_name=RBMY1E;source_gene=hg002_chrY_paternal_477;gene_id=NA19239_ch_G0000203;gene_biotype=protein_coding;gene_name=RBMY1E;gene_sources=liftoff;ID=NA19239_ch_G0000203;Name=RBMY1E
NA19239_chrY	CAT	transcript	23251220	23267070	100	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000552;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_G0000203;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=NA19239_ch_T0000552;Name=RBMY1E
NA19239_chrY	CAT	exon	23251220	23252401	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000552;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000552;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000552:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23252394	23252401	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000552;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000552;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000552:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	23252394	23252396	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000552;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000552;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:NA19239_ch_T0000552;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23252402	23253648	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000552;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000552;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000552:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23253649	23253737	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000552;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000552;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000552:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23253649	23253737	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000552;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000552;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000552:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23253738	23253824	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000552;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000552;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000552:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23253825	23253935	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000552;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000552;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000552:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23253825	23253935	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000552;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000552;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000552:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23253936	23254856	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000552;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000552;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000552:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23254857	23254967	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000552;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000552;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000552:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23254857	23254967	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000552;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000552;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000552:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23254968	23255401	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000552;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000552;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000552:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23255402	23255512	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000552;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000552;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000552:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23255402	23255512	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000552;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000552;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000552:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23255513	23255953	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000552;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000552;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000552:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23255954	23256064	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000552;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000552;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000552:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23255954	23256064	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000552;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000552;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000552:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23256065	23257019	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000552;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000552;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000552:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23257020	23257134	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000552;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000552;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000552:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23257020	23257134	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000552;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000552;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000552:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23257135	23259144	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000552;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000552;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000552:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23259145	23259297	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000552;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000552;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000552:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23259145	23259297	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000552;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000552;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000552:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23259298	23261212	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000552;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000552;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000552:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23261213	23261390	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000552;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000552;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000552:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23261213	23261390	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000552;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000552;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000552:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23261391	23264409	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000552;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000552;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000552:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23264410	23264513	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000552;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000552;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000552:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23264410	23264513	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000552;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000552;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000552:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23264514	23264983	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000552;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000552;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000552:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23264984	23265096	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000552;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000552;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000552:10;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23264984	23265092	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000552;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000552;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000552:10;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23265090	23265092	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000552;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000552;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:NA19239_ch_T0000552;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23265097	23266957	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000552;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000552;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000552:10;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23266958	23267070	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000552;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000552;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000552:11;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	23252665	23267070	100	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000553;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_G0000203;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=NA19239_ch_T0000553;Name=RBMY1E
NA19239_chrY	CAT	exon	23252665	23253237	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000553;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000553;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000553:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23252939	23253237	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000553;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000553;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000553:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	23252939	23252941	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000553;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000553;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:NA19239_ch_T0000553;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23253238	23253648	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000553;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000553;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000553:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23253649	23253737	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000553;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000553;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000553:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23253649	23253737	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000553;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000553;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000553:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23253738	23254856	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000553;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000553;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000553:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23254857	23254967	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000553;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000553;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000553:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23254857	23254967	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000553;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000553;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000553:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23254968	23255401	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000553;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000553;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000553:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23255402	23255512	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000553;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000553;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000553:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23255402	23255512	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000553;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000553;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000553:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23255513	23255953	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000553;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000553;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000553:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23255954	23256064	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000553;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000553;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000553:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23255954	23256064	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000553;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000553;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000553:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23256065	23257019	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000553;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000553;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000553:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23257020	23257134	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000553;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000553;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000553:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23257020	23257134	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000553;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000553;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000553:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23257135	23259144	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000553;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000553;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000553:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23259145	23259297	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000553;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000553;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000553:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23259145	23259297	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000553;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000553;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000553:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23259298	23261212	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000553;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000553;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000553:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23261213	23261390	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000553;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000553;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000553:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23261213	23261390	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000553;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000553;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000553:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23261391	23264409	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000553;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000553;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000553:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23264410	23264513	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000553;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000553;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000553:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23264410	23264513	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000553;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000553;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000553:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23264514	23264983	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000553;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000553;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000553:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23264984	23265096	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000553;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000553;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000553:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23264984	23265092	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000553;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000553;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000553:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23265090	23265092	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000553;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000553;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:NA19239_ch_T0000553;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23265097	23266957	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000553;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000553;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000553:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23266958	23267070	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000553;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000553;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000553:10;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	23252665	23267070	100	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000554;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_G0000203;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=NA19239_ch_T0000554;Name=RBMY1E
NA19239_chrY	CAT	exon	23252665	23253237	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000554;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000554;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000554:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23252939	23253237	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000554;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000554;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000554:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	23252939	23252941	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000554;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000554;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:NA19239_ch_T0000554;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23253238	23253648	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000554;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000554;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000554:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23253649	23253737	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000554;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000554;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000554:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23253649	23253737	.	-	1	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000554;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000554;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000554:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23253738	23255953	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000554;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000554;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000554:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23255954	23256064	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000554;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000554;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000554:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23255954	23256064	.	-	1	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000554;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000554;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000554:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23256065	23257019	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000554;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000554;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000554:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23257020	23257134	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000554;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000554;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000554:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23257020	23257134	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000554;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000554;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000554:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23257135	23259144	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000554;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000554;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000554:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23259145	23259297	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000554;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000554;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000554:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23259145	23259297	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000554;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000554;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000554:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23259298	23261212	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000554;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000554;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000554:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23261213	23261390	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000554;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000554;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000554:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23261213	23261390	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000554;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000554;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000554:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23261391	23264409	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000554;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000554;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000554:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23264410	23264513	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000554;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000554;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000554:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23264410	23264513	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000554;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000554;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000554:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23264514	23264983	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000554;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000554;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000554:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23264984	23265096	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000554;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000554;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000554:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23264984	23265092	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000554;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000554;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000554:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23265090	23265092	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000554;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000554;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:NA19239_ch_T0000554;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23265097	23266957	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000554;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000554;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000554:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23266958	23267070	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000554;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000554;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000554:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	23252665	23264500	100	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000555;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_G0000203;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=NA19239_ch_T0000555;Name=RBMY1E
NA19239_chrY	CAT	exon	23252665	23253237	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000555;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000555;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000555:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23252939	23253237	.	-	2	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000555;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000555;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000555:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	23252939	23252941	.	-	0	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000555;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000555;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:NA19239_ch_T0000555;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23253238	23253648	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000555;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000555;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000555:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23253649	23253737	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000555;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000555;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000555:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23253649	23253737	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000555;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000555;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000555:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23253738	23253824	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000555;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000555;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000555:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23253825	23253935	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000555;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000555;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000555:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23253825	23253935	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000555;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000555;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000555:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23253936	23254856	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000555;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000555;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000555:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23254857	23254967	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000555;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000555;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000555:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23254857	23254967	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000555;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000555;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000555:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23254968	23255401	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000555;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000555;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000555:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23255402	23255512	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000555;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000555;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000555:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23255402	23255512	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000555;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000555;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000555:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23255513	23255953	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000555;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000555;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000555:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23255954	23256064	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000555;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000555;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000555:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23255954	23256064	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000555;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000555;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000555:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23256065	23257019	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000555;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000555;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000555:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23257020	23257134	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000555;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000555;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000555:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23257020	23257134	.	-	2	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000555;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000555;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000555:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23257135	23259144	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000555;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000555;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000555:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23259145	23259297	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000555;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000555;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000555:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23259145	23259268	.	-	0	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000555;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000555;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000555:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23259266	23259268	.	-	0	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000555;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000555;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:NA19239_ch_T0000555;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23259298	23264409	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000555;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000555;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000555:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23264410	23264500	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000555;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000555;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000555:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	23252665	23267070	100	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000556;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_G0000203;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=NA19239_ch_T0000556;Name=RBMY1E
NA19239_chrY	CAT	exon	23252665	23253237	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000556;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000556;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000556:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23252939	23253237	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000556;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000556;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000556:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	23252939	23252941	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000556;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000556;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:NA19239_ch_T0000556;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23253238	23253648	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000556;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000556;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000556:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23253649	23253737	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000556;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000556;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000556:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23253649	23253737	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000556;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000556;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000556:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23253738	23253824	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000556;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000556;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000556:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23253825	23253935	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000556;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000556;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000556:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23253825	23253935	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000556;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000556;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000556:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23253936	23254856	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000556;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000556;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000556:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23254857	23254967	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000556;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000556;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000556:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23254857	23254967	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000556;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000556;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000556:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23254968	23255401	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000556;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000556;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000556:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23255402	23255512	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000556;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000556;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000556:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23255402	23255512	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000556;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000556;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000556:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23255513	23255953	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000556;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000556;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000556:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23255954	23256064	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000556;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000556;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000556:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23255954	23256064	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000556;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000556;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000556:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23256065	23257019	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000556;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000556;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000556:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23257020	23257134	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000556;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000556;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000556:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23257020	23257134	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000556;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000556;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000556:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23257135	23259144	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000556;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000556;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000556:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23259145	23259297	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000556;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000556;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000556:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23259145	23259297	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000556;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000556;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000556:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23259298	23261212	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000556;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000556;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000556:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23261213	23261390	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000556;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000556;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000556:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23261213	23261390	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000556;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000556;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000556:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23261391	23264409	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000556;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000556;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000556:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23264410	23264513	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000556;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000556;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000556:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23264410	23264513	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000556;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000556;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000556:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23264514	23264983	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000556;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000556;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000556:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23264984	23265096	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000556;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000556;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000556:10;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23264984	23265092	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000556;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000556;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000556:10;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23265090	23265092	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000556;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000556;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:NA19239_ch_T0000556;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23265097	23266957	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000556;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000556;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000556:10;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23266958	23267070	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000556;gene_id=NA19239_ch_G0000203;Parent=NA19239_ch_T0000556;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000556:11;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	23274756	23314169	.	-	.	source_gene_common_name=RBMY1E;source_gene=hg002_chrY_paternal_477;gene_id=NA19239_ch_G0000204;gene_biotype=protein_coding;gene_name=RBMY1E;gene_sources=liftoff,augTM,transMap;ID=NA19239_ch_G0000204;Name=RBMY1E
NA19239_chrY	CAT	transcript	23274756	23314169	10000	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_G0000204;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=NA19239_ch_T0000557;Name=RBMY1E
NA19239_chrY	CAT	exon	23274756	23275118	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_T0000557;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000557:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23275119	23298681	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_T0000557;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000557:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23298682	23299500	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_T0000557;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000557:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23299493	23299500	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_T0000557;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000557:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	23299493	23299495	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_T0000557;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:NA19239_ch_T0000557;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23299501	23300747	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_T0000557;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000557:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23300748	23300836	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_T0000557;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000557:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23300748	23300836	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_T0000557;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000557:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23300837	23300923	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_T0000557;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000557:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23300924	23301034	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_T0000557;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000557:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23300924	23301034	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_T0000557;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000557:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23301035	23301955	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_T0000557;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000557:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23301956	23302066	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_T0000557;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000557:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23301956	23302066	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_T0000557;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000557:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23302067	23302500	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_T0000557;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000557:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23302501	23302611	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_T0000557;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000557:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23302501	23302611	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_T0000557;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000557:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23302612	23303052	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_T0000557;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000557:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23303053	23303163	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_T0000557;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000557:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23303053	23303163	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_T0000557;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000557:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23303164	23304118	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_T0000557;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000557:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23304119	23304233	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_T0000557;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000557:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23304119	23304233	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_T0000557;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000557:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23304234	23306243	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_T0000557;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000557:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23306244	23306396	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_T0000557;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000557:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23306244	23306396	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_T0000557;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000557:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23306397	23308311	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_T0000557;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000557:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23308312	23308489	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_T0000557;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000557:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23308312	23308489	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_T0000557;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000557:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23308490	23311508	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_T0000557;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000557:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23311509	23311612	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_T0000557;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000557:10;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23311509	23311612	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_T0000557;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000557:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23311613	23312082	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_T0000557;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000557:10;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23312083	23312195	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_T0000557;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000557:11;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23312083	23312191	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_T0000557;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000557:10;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23312189	23312191	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_T0000557;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:NA19239_ch_T0000557;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23312196	23314056	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_T0000557;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000557:11;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23314057	23314169	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;AdditionalSources=augTM,liftoff;transcript_id=NA19239_ch_T0000557;gene_id=NA19239_ch_G0000204;Parent=NA19239_ch_T0000557;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000557:12;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	23323296	23337743	.	-	.	source_gene_common_name=RBMY1A1;source_gene=hg002_chrY_paternal_462;gene_id=NA19239_ch_G0000205;gene_biotype=protein_coding;gene_name=RBMY1A1;gene_sources=liftoff;ID=NA19239_ch_G0000205;Name=RBMY1A1
NA19239_chrY	CAT	transcript	23323296	23337743	1000	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000558;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_G0000205;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=NA19239_ch_T0000558;Name=RBMY1A1
NA19239_chrY	CAT	exon	23323296	23323872	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000558;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000558;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000558:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23323574	23323872	.	-	2	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000558;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000558;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000558:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	23323574	23323576	.	-	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000558;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000558;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:NA19239_ch_T0000558;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23323873	23324283	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000558;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000558;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000558:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23324284	23324372	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000558;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000558;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000558:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23324284	23324372	.	-	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000558;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000558;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000558:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23324373	23324458	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000558;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000558;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000558:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23324459	23324569	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000558;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000558;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000558:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23324459	23324569	.	-	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000558;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000558;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000558:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23324570	23325490	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000558;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000558;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000558:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23325491	23325601	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000558;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000558;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000558:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23325491	23325601	.	-	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000558;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000558;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000558:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23325602	23326035	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000558;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000558;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000558:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23326036	23326146	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000558;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000558;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000558:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23326036	23326146	.	-	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000558;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000558;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000558:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23326147	23326587	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000558;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000558;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000558:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23326588	23326698	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000558;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000558;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000558:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23326588	23326698	.	-	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000558;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000558;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000558:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23326699	23327653	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000558;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000558;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000558:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23327654	23327768	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000558;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000558;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000558:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23327654	23327768	.	-	2	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000558;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000558;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000558:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23327769	23329778	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000558;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000558;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000558:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23329779	23329931	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000558;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000558;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000558:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23329779	23329902	.	-	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000558;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000558;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000558:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23329900	23329902	.	-	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000558;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000558;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:NA19239_ch_T0000558;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23329932	23335043	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000558;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000558;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000558:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23335044	23335147	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000558;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000558;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000558:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23335148	23335621	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000558;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000558;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000558:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23335622	23335734	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000558;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000558;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000558:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23335735	23337595	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000558;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000558;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000558:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23337596	23337743	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000558;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000558;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000558:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	23323296	23337743	1000	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000559;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_G0000205;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=NA19239_ch_T0000559;Name=RBMY1A1
NA19239_chrY	CAT	exon	23323296	23323872	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000559;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000559;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000559:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23323574	23323872	.	-	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000559;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000559;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000559:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	23323574	23323576	.	-	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000559;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000559;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:NA19239_ch_T0000559;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23323873	23324283	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000559;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000559;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000559:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23324284	23324372	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000559;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000559;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000559:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23324284	23324372	.	-	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000559;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000559;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000559:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23324373	23325490	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000559;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000559;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000559:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23325491	23325601	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000559;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000559;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000559:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23325491	23325601	.	-	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000559;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000559;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000559:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23325602	23326035	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000559;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000559;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000559:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23326036	23326146	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000559;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000559;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000559:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23326036	23326146	.	-	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000559;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000559;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000559:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23326147	23326587	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000559;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000559;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000559:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23326588	23326698	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000559;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000559;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000559:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23326588	23326698	.	-	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000559;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000559;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000559:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23326699	23327653	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000559;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000559;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000559:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23327654	23327768	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000559;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000559;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000559:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23327654	23327768	.	-	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000559;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000559;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000559:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23327769	23329778	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000559;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000559;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000559:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23329779	23329931	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000559;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000559;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000559:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23329779	23329931	.	-	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000559;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000559;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000559:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23329932	23331846	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000559;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000559;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000559:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23331847	23332024	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000559;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000559;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000559:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23331847	23332024	.	-	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000559;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000559;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000559:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23332025	23335043	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000559;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000559;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000559:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23335044	23335147	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000559;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000559;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000559:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23335044	23335147	.	-	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000559;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000559;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000559:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23335148	23335621	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000559;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000559;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000559:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23335622	23335734	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000559;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000559;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000559:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23335622	23335730	.	-	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000559;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000559;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000559:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23335728	23335730	.	-	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000559;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000559;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:NA19239_ch_T0000559;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23335735	23337595	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000559;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000559;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000559:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23337596	23337743	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000559;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000559;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000559:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	23323296	23337743	1000	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000560;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_G0000205;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=NA19239_ch_T0000560;Name=RBMY1A1
NA19239_chrY	CAT	exon	23323296	23323872	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000560;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000560;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000560:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23323574	23323872	.	-	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000560;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000560;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000560:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	23323574	23323576	.	-	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000560;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000560;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:NA19239_ch_T0000560;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23323873	23324283	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000560;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000560;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000560:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23324284	23324372	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000560;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000560;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000560:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23324284	23324372	.	-	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000560;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000560;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000560:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23324373	23324458	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000560;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000560;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000560:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23324459	23324569	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000560;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000560;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000560:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23324459	23324569	.	-	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000560;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000560;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000560:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23324570	23325490	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000560;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000560;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000560:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23325491	23325601	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000560;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000560;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000560:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23325491	23325601	.	-	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000560;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000560;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000560:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23325602	23326035	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000560;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000560;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000560:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23326036	23326146	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000560;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000560;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000560:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23326036	23326146	.	-	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000560;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000560;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000560:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23326147	23326587	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000560;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000560;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000560:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23326588	23326698	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000560;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000560;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000560:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23326588	23326698	.	-	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000560;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000560;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000560:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23326699	23327653	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000560;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000560;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000560:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23327654	23327768	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000560;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000560;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000560:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23327654	23327768	.	-	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000560;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000560;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000560:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23327769	23329778	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000560;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000560;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000560:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23329779	23329931	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000560;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000560;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000560:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23329779	23329931	.	-	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000560;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000560;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000560:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23329932	23331846	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000560;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000560;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000560:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23331847	23332024	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000560;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000560;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000560:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23331847	23332024	.	-	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000560;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000560;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000560:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23332025	23335043	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000560;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000560;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000560:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23335044	23335147	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000560;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000560;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000560:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23335044	23335147	.	-	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000560;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000560;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000560:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23335148	23335621	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000560;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000560;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000560:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23335622	23335734	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000560;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000560;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000560:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23335622	23335730	.	-	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000560;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000560;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000560:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23335728	23335730	.	-	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000560;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000560;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:NA19239_ch_T0000560;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23335735	23337595	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000560;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000560;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000560:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23337596	23337743	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000560;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000560;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000560:11;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	23324284	23337743	1000	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000561;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_G0000205;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=NA19239_ch_T0000561;Name=RBMY1A1
NA19239_chrY	CAT	exon	23324284	23324372	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000561;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000561;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000561:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23324285	23324372	.	-	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000561;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000561;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000561:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	23324285	23324287	.	-	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000561;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000561;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:NA19239_ch_T0000561;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23324373	23324458	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000561;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000561;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000561:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23324459	23324569	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000561;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000561;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000561:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23324459	23324569	.	-	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000561;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000561;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000561:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23324570	23325490	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000561;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000561;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000561:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23325491	23325601	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000561;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000561;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000561:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23325491	23325601	.	-	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000561;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000561;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000561:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23325602	23326035	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000561;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000561;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000561:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23326036	23326146	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000561;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000561;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000561:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23326036	23326146	.	-	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000561;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000561;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000561:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23326147	23326587	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000561;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000561;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000561:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23326588	23326698	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000561;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000561;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000561:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23326588	23326698	.	-	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000561;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000561;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000561:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23326699	23327653	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000561;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000561;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000561:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23327654	23327768	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000561;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000561;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000561:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23327654	23327768	.	-	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000561;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000561;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000561:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23327769	23329778	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000561;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000561;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000561:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23329779	23329931	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000561;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000561;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000561:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23329779	23329931	.	-	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000561;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000561;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000561:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23329932	23331846	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000561;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000561;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000561:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23331847	23332024	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000561;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000561;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000561:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23331847	23332024	.	-	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000561;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000561;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000561:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23332025	23335043	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000561;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000561;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000561:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23335044	23335147	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000561;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000561;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000561:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23335044	23335147	.	-	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000561;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000561;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000561:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23335148	23335621	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000561;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000561;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000561:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23335622	23335734	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000561;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000561;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000561:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23335622	23335730	.	-	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000561;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000561;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000561:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23335728	23335730	.	-	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000561;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000561;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:NA19239_ch_T0000561;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23335735	23337595	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000561;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000561;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000561:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23337596	23337743	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000561;gene_id=NA19239_ch_G0000205;Parent=NA19239_ch_T0000561;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000561:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	23345418	23361272	.	-	.	source_gene_common_name=RBMY1E;source_gene=hg002_chrY_paternal_477;gene_id=NA19239_ch_G0000206;gene_biotype=protein_coding;gene_name=RBMY1E;gene_sources=liftoff;ID=NA19239_ch_G0000206;Name=RBMY1E
NA19239_chrY	CAT	transcript	23345418	23361272	100	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000562;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_G0000206;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=NA19239_ch_T0000562;Name=RBMY1E
NA19239_chrY	CAT	exon	23345418	23346599	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000562;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000562;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000562:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23346592	23346599	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000562;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000562;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000562:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	23346592	23346594	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000562;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000562;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:NA19239_ch_T0000562;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23346600	23347846	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000562;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000562;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000562:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23347847	23347935	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000562;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000562;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000562:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23347847	23347935	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000562;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000562;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000562:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23347936	23348022	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000562;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000562;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000562:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23348023	23348133	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000562;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000562;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000562:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23348023	23348133	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000562;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000562;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000562:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23348134	23349054	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000562;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000562;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000562:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23349055	23349165	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000562;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000562;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000562:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23349055	23349165	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000562;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000562;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000562:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23349166	23349599	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000562;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000562;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000562:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23349600	23349710	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000562;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000562;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000562:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23349600	23349710	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000562;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000562;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000562:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23349711	23350151	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000562;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000562;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000562:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23350152	23350262	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000562;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000562;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000562:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23350152	23350262	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000562;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000562;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000562:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23350263	23351217	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000562;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000562;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000562:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23351218	23351332	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000562;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000562;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000562:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23351218	23351332	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000562;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000562;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000562:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23351333	23353342	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000562;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000562;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000562:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23353343	23353495	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000562;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000562;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000562:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23353343	23353495	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000562;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000562;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000562:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23353496	23355410	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000562;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000562;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000562:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23355411	23355588	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000562;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000562;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000562:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23355411	23355588	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000562;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000562;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000562:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23355589	23358607	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000562;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000562;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000562:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23358608	23358711	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000562;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000562;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000562:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23358608	23358711	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000562;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000562;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000562:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23358712	23359185	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000562;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000562;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000562:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23359186	23359298	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000562;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000562;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000562:10;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23359186	23359294	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000562;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000562;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000562:10;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23359292	23359294	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000562;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000562;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:NA19239_ch_T0000562;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23359299	23361159	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000562;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000562;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000562:10;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23361160	23361272	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000562;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000562;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000562:11;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	23346863	23361272	100	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000563;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_G0000206;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=NA19239_ch_T0000563;Name=RBMY1E
NA19239_chrY	CAT	exon	23346863	23347435	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000563;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000563;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000563:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23347137	23347435	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000563;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000563;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000563:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	23347137	23347139	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000563;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000563;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:NA19239_ch_T0000563;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23347436	23347846	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000563;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000563;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000563:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23347847	23347935	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000563;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000563;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000563:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23347847	23347935	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000563;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000563;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000563:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23347936	23349054	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000563;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000563;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000563:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23349055	23349165	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000563;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000563;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000563:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23349055	23349165	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000563;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000563;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000563:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23349166	23349599	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000563;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000563;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000563:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23349600	23349710	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000563;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000563;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000563:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23349600	23349710	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000563;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000563;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000563:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23349711	23350151	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000563;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000563;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000563:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23350152	23350262	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000563;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000563;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000563:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23350152	23350262	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000563;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000563;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000563:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23350263	23351217	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000563;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000563;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000563:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23351218	23351332	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000563;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000563;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000563:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23351218	23351332	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000563;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000563;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000563:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23351333	23353342	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000563;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000563;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000563:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23353343	23353495	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000563;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000563;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000563:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23353343	23353495	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000563;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000563;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000563:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23353496	23355410	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000563;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000563;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000563:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23355411	23355588	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000563;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000563;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000563:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23355411	23355588	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000563;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000563;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000563:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23355589	23358607	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000563;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000563;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000563:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23358608	23358711	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000563;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000563;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000563:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23358608	23358711	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000563;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000563;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000563:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23358712	23359185	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000563;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000563;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000563:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23359186	23359298	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000563;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000563;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000563:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23359186	23359294	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000563;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000563;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000563:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23359292	23359294	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000563;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000563;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:NA19239_ch_T0000563;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23359299	23361159	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000563;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000563;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000563:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23361160	23361272	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000563;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000563;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000563:10;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	23346863	23361272	100	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000564;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_G0000206;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=NA19239_ch_T0000564;Name=RBMY1E
NA19239_chrY	CAT	exon	23346863	23347435	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000564;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000564;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000564:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23347137	23347435	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000564;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000564;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000564:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	23347137	23347139	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000564;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000564;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:NA19239_ch_T0000564;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23347436	23347846	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000564;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000564;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000564:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23347847	23347935	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000564;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000564;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000564:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23347847	23347935	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000564;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000564;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000564:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23347936	23348022	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000564;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000564;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000564:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23348023	23348133	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000564;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000564;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000564:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23348023	23348133	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000564;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000564;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000564:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23348134	23349054	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000564;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000564;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000564:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23349055	23349165	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000564;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000564;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000564:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23349055	23349165	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000564;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000564;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000564:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23349166	23349599	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000564;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000564;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000564:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23349600	23349710	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000564;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000564;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000564:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23349600	23349710	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000564;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000564;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000564:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23349711	23350151	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000564;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000564;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000564:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23350152	23350262	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000564;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000564;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000564:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23350152	23350262	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000564;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000564;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000564:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23350263	23351217	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000564;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000564;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000564:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23351218	23351332	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000564;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000564;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000564:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23351218	23351332	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000564;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000564;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000564:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23351333	23353342	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000564;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000564;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000564:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23353343	23353495	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000564;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000564;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000564:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23353343	23353495	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000564;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000564;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000564:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23353496	23355410	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000564;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000564;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000564:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23355411	23355588	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000564;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000564;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000564:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23355411	23355588	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000564;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000564;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000564:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23355589	23358607	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000564;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000564;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000564:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23358608	23358711	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000564;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000564;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000564:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23358608	23358711	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000564;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000564;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000564:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23358712	23359185	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000564;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000564;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000564:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23359186	23359298	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000564;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000564;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000564:10;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23359186	23359294	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000564;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000564;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000564:10;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23359292	23359294	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000564;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000564;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:NA19239_ch_T0000564;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23359299	23361159	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000564;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000564;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000564:10;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23361160	23361272	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000564;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000564;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000564:11;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	23346863	23358698	100	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000565;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_G0000206;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=NA19239_ch_T0000565;Name=RBMY1E
NA19239_chrY	CAT	exon	23346863	23347435	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000565;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000565;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000565:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23347137	23347435	.	-	2	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000565;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000565;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000565:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	23347137	23347139	.	-	0	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000565;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000565;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:NA19239_ch_T0000565;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23347436	23347846	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000565;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000565;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000565:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23347847	23347935	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000565;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000565;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000565:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23347847	23347935	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000565;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000565;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000565:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23347936	23348022	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000565;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000565;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000565:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23348023	23348133	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000565;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000565;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000565:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23348023	23348133	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000565;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000565;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000565:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23348134	23349054	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000565;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000565;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000565:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23349055	23349165	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000565;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000565;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000565:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23349055	23349165	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000565;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000565;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000565:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23349166	23349599	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000565;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000565;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000565:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23349600	23349710	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000565;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000565;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000565:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23349600	23349710	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000565;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000565;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000565:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23349711	23350151	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000565;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000565;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000565:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23350152	23350262	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000565;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000565;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000565:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23350152	23350262	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000565;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000565;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000565:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23350263	23351217	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000565;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000565;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000565:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23351218	23351332	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000565;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000565;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000565:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23351218	23351332	.	-	2	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000565;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000565;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000565:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23351333	23353342	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000565;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000565;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000565:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23353343	23353495	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000565;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000565;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000565:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23353343	23353466	.	-	0	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000565;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000565;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000565:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23353464	23353466	.	-	0	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000565;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000565;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:NA19239_ch_T0000565;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23353496	23358607	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000565;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000565;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000565:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23358608	23358698	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000565;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000565;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000565:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	23346863	23361272	100	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000566;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_G0000206;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=NA19239_ch_T0000566;Name=RBMY1E
NA19239_chrY	CAT	exon	23346863	23347435	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000566;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000566:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23347137	23347435	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000566;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000566:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	23347137	23347139	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000566;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:NA19239_ch_T0000566;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23347436	23347846	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000566;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000566:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23347847	23347935	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000566;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000566:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23347847	23347935	.	-	1	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000566;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000566:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23347936	23350151	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000566;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000566:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23350152	23350262	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000566;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000566:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23350152	23350262	.	-	1	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000566;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000566:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23350263	23351217	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000566;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000566:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23351218	23351332	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000566;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000566:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23351218	23351332	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000566;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000566:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23351333	23353342	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000566;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000566:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23353343	23353495	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000566;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000566:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23353343	23353495	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000566;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000566:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23353496	23355410	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000566;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000566:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23355411	23355588	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000566;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000566:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23355411	23355588	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000566;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000566:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23355589	23358607	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000566;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000566:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23358608	23358711	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000566;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000566:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23358608	23358711	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000566;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000566:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23358712	23359185	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000566;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000566:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23359186	23359298	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000566;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000566:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23359186	23359294	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000566;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000566:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23359292	23359294	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000566;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:NA19239_ch_T0000566;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23359299	23361159	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000566;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000566:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23361160	23361272	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000566;gene_id=NA19239_ch_G0000206;Parent=NA19239_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000566:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	23370399	23384846	.	-	.	source_gene_common_name=RBMY1A1;source_gene=hg002_chrY_paternal_462;gene_id=NA19239_ch_G0000207;gene_biotype=protein_coding;gene_name=RBMY1A1;gene_sources=liftoff;ID=NA19239_ch_G0000207;Name=RBMY1A1
NA19239_chrY	CAT	transcript	23370399	23384846	1000	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000567;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_G0000207;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=NA19239_ch_T0000567;Name=RBMY1A1
NA19239_chrY	CAT	exon	23370399	23370975	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000567;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000567:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23370677	23370975	.	-	2	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000567;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000567:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	23370677	23370679	.	-	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000567;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:NA19239_ch_T0000567;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23370976	23371386	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000567;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000567:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23371387	23371475	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000567;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000567:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23371387	23371475	.	-	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000567;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000567:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23371476	23371561	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000567;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000567:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23371562	23371672	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000567;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000567:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23371562	23371672	.	-	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000567;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000567:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23371673	23372593	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000567;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000567:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23372594	23372704	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000567;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000567:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23372594	23372704	.	-	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000567;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000567:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23372705	23373138	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000567;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000567:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23373139	23373249	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000567;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000567:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23373139	23373249	.	-	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000567;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000567:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23373250	23373690	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000567;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000567:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23373691	23373801	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000567;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000567:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23373691	23373801	.	-	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000567;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000567:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23373802	23374756	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000567;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000567:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23374757	23374871	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000567;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000567:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23374757	23374871	.	-	2	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000567;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000567:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23374872	23376881	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000567;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000567:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23376882	23377034	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000567;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000567:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23376882	23377005	.	-	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000567;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000567:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23377003	23377005	.	-	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000567;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:NA19239_ch_T0000567;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23377035	23382146	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000567;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000567:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23382147	23382250	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000567;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000567:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23382251	23382724	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000567;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000567:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23382725	23382837	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000567;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000567:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23382838	23384698	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000567;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000567:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23384699	23384846	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000567;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000567;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000567:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	23370399	23384846	1000	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000568;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_G0000207;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=NA19239_ch_T0000568;Name=RBMY1A1
NA19239_chrY	CAT	exon	23370399	23370975	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000568;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000568:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23370677	23370975	.	-	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000568;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000568:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	23370677	23370679	.	-	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000568;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:NA19239_ch_T0000568;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23370976	23371386	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000568;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000568:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23371387	23371475	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000568;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000568:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23371387	23371475	.	-	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000568;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000568:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23371476	23371561	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000568;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000568:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23371562	23371672	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000568;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000568:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23371562	23371672	.	-	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000568;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000568:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23371673	23372593	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000568;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000568:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23372594	23372704	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000568;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000568:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23372594	23372704	.	-	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000568;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000568:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23372705	23373138	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000568;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000568:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23373139	23373249	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000568;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000568:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23373139	23373249	.	-	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000568;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000568:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23373250	23373690	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000568;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000568:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23373691	23373801	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000568;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000568:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23373691	23373801	.	-	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000568;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000568:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23373802	23374756	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000568;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000568:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23374757	23374871	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000568;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000568:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23374757	23374871	.	-	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000568;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000568:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23374872	23376881	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000568;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000568:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23376882	23377034	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000568;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000568:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23376882	23377034	.	-	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000568;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000568:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23377035	23378949	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000568;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000568:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23378950	23379127	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000568;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000568:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23378950	23379127	.	-	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000568;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000568:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23379128	23382146	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000568;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000568:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23382147	23382250	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000568;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000568:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23382147	23382250	.	-	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000568;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000568:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23382251	23382724	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000568;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000568:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23382725	23382837	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000568;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000568:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23382725	23382833	.	-	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000568;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000568:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23382831	23382833	.	-	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000568;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:NA19239_ch_T0000568;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23382838	23384698	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000568;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000568:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23384699	23384846	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000568;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000568;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000568:11;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	23370399	23384846	1000	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000569;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_G0000207;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=NA19239_ch_T0000569;Name=RBMY1A1
NA19239_chrY	CAT	exon	23370399	23370975	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000569;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000569:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23370677	23370975	.	-	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000569;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000569:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	23370677	23370679	.	-	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000569;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:NA19239_ch_T0000569;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23370976	23371386	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000569;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000569:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23371387	23371475	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000569;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000569:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23371387	23371475	.	-	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000569;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000569:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23371476	23372593	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000569;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000569:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23372594	23372704	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000569;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000569:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23372594	23372704	.	-	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000569;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000569:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23372705	23373138	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000569;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000569:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23373139	23373249	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000569;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000569:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23373139	23373249	.	-	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000569;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000569:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23373250	23373690	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000569;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000569:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23373691	23373801	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000569;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000569:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23373691	23373801	.	-	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000569;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000569:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23373802	23374756	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000569;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000569:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23374757	23374871	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000569;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000569:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23374757	23374871	.	-	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000569;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000569:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23374872	23376881	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000569;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000569:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23376882	23377034	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000569;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000569:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23376882	23377034	.	-	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000569;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000569:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23377035	23378949	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000569;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000569:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23378950	23379127	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000569;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000569:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23378950	23379127	.	-	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000569;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000569:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23379128	23382146	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000569;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000569:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23382147	23382250	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000569;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000569:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23382147	23382250	.	-	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000569;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000569:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23382251	23382724	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000569;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000569:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23382725	23382837	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000569;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000569:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23382725	23382833	.	-	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000569;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000569:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23382831	23382833	.	-	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000569;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:NA19239_ch_T0000569;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23382838	23384698	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000569;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000569:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23384699	23384846	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000569;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000569;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000569:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	23371387	23384846	1000	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000570;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_G0000207;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=NA19239_ch_T0000570;Name=RBMY1A1
NA19239_chrY	CAT	exon	23371387	23371475	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000570;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000570:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23371388	23371475	.	-	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000570;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000570:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	23371388	23371390	.	-	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000570;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:NA19239_ch_T0000570;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23371476	23371561	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000570;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000570:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23371562	23371672	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000570;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000570:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23371562	23371672	.	-	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000570;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000570:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23371673	23372593	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000570;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000570:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23372594	23372704	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000570;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000570:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23372594	23372704	.	-	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000570;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000570:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23372705	23373138	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000570;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000570:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23373139	23373249	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000570;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000570:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23373139	23373249	.	-	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000570;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000570:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23373250	23373690	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000570;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000570:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23373691	23373801	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000570;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000570:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23373691	23373801	.	-	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000570;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000570:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23373802	23374756	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000570;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000570:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23374757	23374871	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000570;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000570:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23374757	23374871	.	-	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000570;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000570:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23374872	23376881	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000570;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000570:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23376882	23377034	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000570;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000570:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23376882	23377034	.	-	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000570;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000570:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23377035	23378949	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000570;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000570:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23378950	23379127	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000570;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000570:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23378950	23379127	.	-	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000570;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000570:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23379128	23382146	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000570;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000570:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23382147	23382250	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000570;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000570:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23382147	23382250	.	-	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000570;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000570:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23382251	23382724	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000570;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000570:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23382725	23382837	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000570;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000570:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23382725	23382833	.	-	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000570;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19239_ch_T0000570:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23382831	23382833	.	-	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000570;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:NA19239_ch_T0000570;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23382838	23384698	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000570;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19239_ch_T0000570:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23384699	23384846	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19239_ch_T0000570;gene_id=NA19239_ch_G0000207;Parent=NA19239_ch_T0000570;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19239_ch_T0000570:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	23392497	23408351	.	-	.	source_gene_common_name=RBMY1E;source_gene=hg002_chrY_paternal_477;gene_id=NA19239_ch_G0000208;gene_biotype=protein_coding;gene_name=RBMY1E;gene_sources=liftoff;ID=NA19239_ch_G0000208;Name=RBMY1E
NA19239_chrY	CAT	transcript	23392497	23408351	100	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000571;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_G0000208;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=NA19239_ch_T0000571;Name=RBMY1E
NA19239_chrY	CAT	exon	23392497	23393678	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000571;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000571;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000571:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23393671	23393678	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000571;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000571;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000571:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	23393671	23393673	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000571;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000571;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:NA19239_ch_T0000571;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23393679	23394925	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000571;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000571;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000571:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23394926	23395014	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000571;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000571;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000571:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23394926	23395014	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000571;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000571;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000571:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23395015	23395101	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000571;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000571;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000571:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23395102	23395212	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000571;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000571;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000571:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23395102	23395212	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000571;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000571;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000571:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23395213	23396133	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000571;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000571;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000571:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23396134	23396244	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000571;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000571;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000571:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23396134	23396244	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000571;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000571;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000571:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23396245	23396678	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000571;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000571;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000571:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23396679	23396789	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000571;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000571;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000571:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23396679	23396789	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000571;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000571;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000571:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23396790	23397230	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000571;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000571;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000571:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23397231	23397341	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000571;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000571;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000571:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23397231	23397341	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000571;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000571;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000571:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23397342	23398296	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000571;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000571;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000571:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23398297	23398411	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000571;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000571;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000571:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23398297	23398411	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000571;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000571;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000571:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23398412	23400421	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000571;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000571;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000571:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23400422	23400574	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000571;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000571;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000571:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23400422	23400574	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000571;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000571;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000571:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23400575	23402489	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000571;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000571;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000571:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23402490	23402667	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000571;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000571;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000571:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23402490	23402667	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000571;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000571;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000571:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23402668	23405686	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000571;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000571;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000571:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23405687	23405790	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000571;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000571;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000571:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23405687	23405790	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000571;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000571;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000571:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23405791	23406264	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000571;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000571;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000571:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23406265	23406377	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000571;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000571;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000571:10;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23406265	23406373	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000571;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000571;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000571:10;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23406371	23406373	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000571;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000571;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:NA19239_ch_T0000571;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23406378	23408238	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000571;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000571;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000571:10;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23408239	23408351	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000571;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000571;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000571:11;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	23393942	23408351	100	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000572;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_G0000208;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=NA19239_ch_T0000572;Name=RBMY1E
NA19239_chrY	CAT	exon	23393942	23394514	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000572;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000572;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000572:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23394216	23394514	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000572;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000572;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000572:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	23394216	23394218	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000572;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000572;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:NA19239_ch_T0000572;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23394515	23394925	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000572;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000572;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000572:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23394926	23395014	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000572;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000572;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000572:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23394926	23395014	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000572;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000572;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000572:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23395015	23395101	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000572;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000572;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000572:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23395102	23395212	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000572;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000572;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000572:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23395102	23395212	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000572;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000572;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000572:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23395213	23396133	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000572;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000572;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000572:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23396134	23396244	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000572;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000572;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000572:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23396134	23396244	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000572;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000572;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000572:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23396245	23396678	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000572;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000572;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000572:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23396679	23396789	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000572;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000572;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000572:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23396679	23396789	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000572;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000572;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000572:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23396790	23397230	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000572;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000572;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000572:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23397231	23397341	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000572;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000572;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000572:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23397231	23397341	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000572;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000572;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000572:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23397342	23398296	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000572;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000572;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000572:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23398297	23398411	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000572;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000572;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000572:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23398297	23398411	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000572;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000572;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000572:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23398412	23400421	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000572;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000572;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000572:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23400422	23400574	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000572;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000572;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000572:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23400422	23400574	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000572;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000572;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000572:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23400575	23402489	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000572;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000572;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000572:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23402490	23402667	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000572;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000572;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000572:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23402490	23402667	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000572;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000572;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000572:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23402668	23405686	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000572;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000572;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000572:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23405687	23405790	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000572;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000572;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000572:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23405687	23405790	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000572;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000572;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000572:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23405791	23406264	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000572;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000572;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000572:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23406265	23406377	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000572;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000572;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000572:10;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23406265	23406373	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000572;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000572;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000572:10;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23406371	23406373	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000572;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000572;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:NA19239_ch_T0000572;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23406378	23408238	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000572;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000572;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000572:10;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23408239	23408351	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000572;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000572;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000572:11;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	23393942	23408351	100	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000573;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_G0000208;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=NA19239_ch_T0000573;Name=RBMY1E
NA19239_chrY	CAT	exon	23393942	23394514	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000573;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000573;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000573:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23394216	23394514	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000573;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000573;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000573:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	23394216	23394218	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000573;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000573;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:NA19239_ch_T0000573;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23394515	23394925	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000573;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000573;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000573:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23394926	23395014	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000573;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000573;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000573:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23394926	23395014	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000573;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000573;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000573:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23395015	23396133	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000573;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000573;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000573:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23396134	23396244	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000573;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000573;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000573:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23396134	23396244	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000573;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000573;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000573:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23396245	23396678	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000573;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000573;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000573:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23396679	23396789	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000573;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000573;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000573:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23396679	23396789	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000573;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000573;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000573:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23396790	23397230	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000573;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000573;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000573:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23397231	23397341	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000573;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000573;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000573:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23397231	23397341	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000573;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000573;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000573:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23397342	23398296	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000573;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000573;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000573:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23398297	23398411	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000573;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000573;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000573:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23398297	23398411	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000573;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000573;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000573:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23398412	23400421	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000573;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000573;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000573:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23400422	23400574	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000573;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000573;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000573:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23400422	23400574	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000573;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000573;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000573:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23400575	23402489	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000573;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000573;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000573:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23402490	23402667	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000573;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000573;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000573:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23402490	23402667	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000573;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000573;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000573:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23402668	23405686	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000573;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000573;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000573:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23405687	23405790	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000573;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000573;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000573:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23405687	23405790	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000573;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000573;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000573:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23405791	23406264	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000573;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000573;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000573:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23406265	23406377	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000573;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000573;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000573:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23406265	23406373	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000573;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000573;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000573:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23406371	23406373	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000573;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000573;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:NA19239_ch_T0000573;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23406378	23408238	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000573;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000573;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000573:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23408239	23408351	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000573;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000573;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000573:10;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	23393942	23405777	100	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000574;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_G0000208;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=NA19239_ch_T0000574;Name=RBMY1E
NA19239_chrY	CAT	exon	23393942	23394514	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000574;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000574;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000574:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23394216	23394514	.	-	2	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000574;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000574;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000574:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	23394216	23394218	.	-	0	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000574;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000574;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:NA19239_ch_T0000574;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23394515	23394925	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000574;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000574;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000574:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23394926	23395014	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000574;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000574;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000574:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23394926	23395014	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000574;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000574;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000574:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23395015	23395101	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000574;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000574;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000574:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23395102	23395212	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000574;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000574;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000574:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23395102	23395212	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000574;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000574;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000574:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23395213	23396133	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000574;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000574;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000574:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23396134	23396244	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000574;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000574;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000574:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23396134	23396244	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000574;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000574;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000574:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23396245	23396678	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000574;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000574;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000574:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23396679	23396789	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000574;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000574;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000574:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23396679	23396789	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000574;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000574;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000574:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23396790	23397230	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000574;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000574;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000574:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23397231	23397341	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000574;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000574;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000574:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23397231	23397341	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000574;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000574;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000574:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23397342	23398296	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000574;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000574;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000574:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23398297	23398411	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000574;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000574;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000574:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23398297	23398411	.	-	2	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000574;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000574;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000574:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23398412	23400421	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000574;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000574;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000574:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23400422	23400574	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000574;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000574;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000574:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23400422	23400545	.	-	0	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000574;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000574;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000574:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23400543	23400545	.	-	0	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000574;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000574;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:NA19239_ch_T0000574;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23400575	23405686	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000574;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000574;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000574:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23405687	23405777	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000574;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000574;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000574:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	23393942	23408351	100	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000575;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_G0000208;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=NA19239_ch_T0000575;Name=RBMY1E
NA19239_chrY	CAT	exon	23393942	23394514	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000575;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000575;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000575:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23394216	23394514	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000575;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000575;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000575:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	23394216	23394218	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000575;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000575;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:NA19239_ch_T0000575;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23394515	23394925	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000575;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000575;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000575:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23394926	23395014	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000575;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000575;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000575:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23394926	23395014	.	-	1	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000575;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000575;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000575:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23395015	23397230	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000575;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000575;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000575:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23397231	23397341	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000575;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000575;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000575:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23397231	23397341	.	-	1	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000575;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000575;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000575:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23397342	23398296	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000575;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000575;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000575:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23398297	23398411	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000575;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000575;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000575:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23398297	23398411	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000575;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000575;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000575:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23398412	23400421	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000575;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000575;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000575:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23400422	23400574	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000575;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000575;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000575:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23400422	23400574	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000575;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000575;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000575:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23400575	23402489	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000575;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000575;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000575:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23402490	23402667	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000575;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000575;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000575:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23402490	23402667	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000575;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000575;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000575:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23402668	23405686	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000575;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000575;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000575:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23405687	23405790	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000575;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000575;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000575:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23405687	23405790	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000575;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000575;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000575:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23405791	23406264	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000575;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000575;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000575:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23406265	23406377	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000575;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000575;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000575:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23406265	23406373	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000575;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000575;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19239_ch_T0000575:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23406371	23406373	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000575;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000575;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:NA19239_ch_T0000575;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23406378	23408238	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000575;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000575;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19239_ch_T0000575:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23408239	23408351	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA19239_ch_T0000575;gene_id=NA19239_ch_G0000208;Parent=NA19239_ch_T0000575;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19239_ch_T0000575:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	23518646	23520673	.	+	.	source_gene_common_name=LOC107987356;source_gene=hg002_chrY_paternal_481;alternative_source_transcripts=hg002_chrY_paternal_481.1,hg002_chrY_paternal_481.1;gene_id=NA19239_ch_G0000209;gene_biotype=lncRNA;gene_name=LOC107987356;gene_sources=liftoff;ID=NA19239_ch_G0000209;Name=LOC107987356
NA19239_chrY	CAT	transcript	23518646	23520673	1000	+	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;alternative_source_transcripts=hg002_chrY_paternal_481.1,hg002_chrY_paternal_481.1;transcript_id=NA19239_ch_T0000576;gene_id=NA19239_ch_G0000209;Parent=NA19239_ch_G0000209;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=NA19239_ch_T0000576;Name=LOC107987356
NA19239_chrY	CAT	exon	23518646	23518758	.	+	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;alternative_source_transcripts=hg002_chrY_paternal_481.1,hg002_chrY_paternal_481.1;transcript_id=NA19239_ch_T0000576;gene_id=NA19239_ch_G0000209;Parent=NA19239_ch_T0000576;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=exon:NA19239_ch_T0000576:0;Name=LOC107987356;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23518759	23518875	.	+	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;alternative_source_transcripts=hg002_chrY_paternal_481.1,hg002_chrY_paternal_481.1;transcript_id=NA19239_ch_T0000576;gene_id=NA19239_ch_G0000209;Parent=NA19239_ch_T0000576;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=intron:NA19239_ch_T0000576:0;Name=LOC107987356;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23518876	23518936	.	+	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;alternative_source_transcripts=hg002_chrY_paternal_481.1,hg002_chrY_paternal_481.1;transcript_id=NA19239_ch_T0000576;gene_id=NA19239_ch_G0000209;Parent=NA19239_ch_T0000576;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=exon:NA19239_ch_T0000576:1;Name=LOC107987356;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23518937	23520471	.	+	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;alternative_source_transcripts=hg002_chrY_paternal_481.1,hg002_chrY_paternal_481.1;transcript_id=NA19239_ch_T0000576;gene_id=NA19239_ch_G0000209;Parent=NA19239_ch_T0000576;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=intron:NA19239_ch_T0000576:1;Name=LOC107987356;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23520472	23520673	.	+	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;alternative_source_transcripts=hg002_chrY_paternal_481.1,hg002_chrY_paternal_481.1;transcript_id=NA19239_ch_T0000576;gene_id=NA19239_ch_G0000209;Parent=NA19239_ch_T0000576;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=exon:NA19239_ch_T0000576:2;Name=LOC107987356;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	23562081	23586331	.	-	.	source_gene_common_name=PRY2;source_gene=hg002_chrY_paternal_505;alternative_source_transcripts=hg002_chrY_paternal_486.1;gene_id=NA19239_ch_G0000210;gene_biotype=protein_coding;gene_name=PRY2;gene_sources=liftoff;ID=NA19239_ch_G0000210;Name=PRY2
NA19239_chrY	CAT	transcript	23562081	23586331	100	-	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1;transcript_id=NA19239_ch_T0000577;gene_id=NA19239_ch_G0000210;Parent=NA19239_ch_G0000210;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=NA19239_ch_T0000577;Name=PRY2
NA19239_chrY	CAT	exon	23562081	23562906	.	-	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1;transcript_id=NA19239_ch_T0000577;gene_id=NA19239_ch_G0000210;Parent=NA19239_ch_T0000577;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:NA19239_ch_T0000577:0;Name=PRY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23562648	23562906	.	-	1	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1;transcript_id=NA19239_ch_T0000577;gene_id=NA19239_ch_G0000210;Parent=NA19239_ch_T0000577;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=CDS:NA19239_ch_T0000577:0;Name=PRY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	23562648	23562650	.	-	0	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1;transcript_id=NA19239_ch_T0000577;gene_id=NA19239_ch_G0000210;Parent=NA19239_ch_T0000577;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=stop_codon:NA19239_ch_T0000577;Name=PRY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23562907	23572404	.	-	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1;transcript_id=NA19239_ch_T0000577;gene_id=NA19239_ch_G0000210;Parent=NA19239_ch_T0000577;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=intron:NA19239_ch_T0000577:0;Name=PRY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23572405	23572520	.	-	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1;transcript_id=NA19239_ch_T0000577;gene_id=NA19239_ch_G0000210;Parent=NA19239_ch_T0000577;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:NA19239_ch_T0000577:1;Name=PRY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23572405	23572520	.	-	0	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1;transcript_id=NA19239_ch_T0000577;gene_id=NA19239_ch_G0000210;Parent=NA19239_ch_T0000577;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=CDS:NA19239_ch_T0000577:1;Name=PRY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23572521	23575095	.	-	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1;transcript_id=NA19239_ch_T0000577;gene_id=NA19239_ch_G0000210;Parent=NA19239_ch_T0000577;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=intron:NA19239_ch_T0000577:1;Name=PRY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23575096	23575216	.	-	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1;transcript_id=NA19239_ch_T0000577;gene_id=NA19239_ch_G0000210;Parent=NA19239_ch_T0000577;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:NA19239_ch_T0000577:2;Name=PRY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23575096	23575164	.	-	0	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1;transcript_id=NA19239_ch_T0000577;gene_id=NA19239_ch_G0000210;Parent=NA19239_ch_T0000577;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=CDS:NA19239_ch_T0000577:2;Name=PRY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23575162	23575164	.	-	0	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1;transcript_id=NA19239_ch_T0000577;gene_id=NA19239_ch_G0000210;Parent=NA19239_ch_T0000577;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=start_codon:NA19239_ch_T0000577;Name=PRY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23575217	23586055	.	-	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1;transcript_id=NA19239_ch_T0000577;gene_id=NA19239_ch_G0000210;Parent=NA19239_ch_T0000577;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=intron:NA19239_ch_T0000577:2;Name=PRY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23586056	23586142	.	-	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1;transcript_id=NA19239_ch_T0000577;gene_id=NA19239_ch_G0000210;Parent=NA19239_ch_T0000577;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:NA19239_ch_T0000577:3;Name=PRY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23586143	23586243	.	-	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1;transcript_id=NA19239_ch_T0000577;gene_id=NA19239_ch_G0000210;Parent=NA19239_ch_T0000577;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=intron:NA19239_ch_T0000577:3;Name=PRY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23586244	23586331	.	-	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1;transcript_id=NA19239_ch_T0000577;gene_id=NA19239_ch_G0000210;Parent=NA19239_ch_T0000577;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:NA19239_ch_T0000577:4;Name=PRY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	23592017	23637850	.	-	.	source_gene_common_name=LOC102725532;source_gene=hg002_chrY_paternal_487;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;gene_id=NA19239_ch_G0000211;gene_biotype=lncRNA;gene_name=LOC102725532;gene_sources=liftoff;ID=NA19239_ch_G0000211;Name=LOC102725532
NA19239_chrY	CAT	transcript	23592017	23637850	1000	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=NA19239_ch_T0000578;gene_id=NA19239_ch_G0000211;Parent=NA19239_ch_G0000211;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=NA19239_ch_T0000578;Name=LOC102725532
NA19239_chrY	CAT	exon	23592017	23592694	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=NA19239_ch_T0000578;gene_id=NA19239_ch_G0000211;Parent=NA19239_ch_T0000578;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:NA19239_ch_T0000578:0;Name=LOC102725532;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23592695	23593209	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=NA19239_ch_T0000578;gene_id=NA19239_ch_G0000211;Parent=NA19239_ch_T0000578;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:NA19239_ch_T0000578:0;Name=LOC102725532;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23593210	23593327	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=NA19239_ch_T0000578;gene_id=NA19239_ch_G0000211;Parent=NA19239_ch_T0000578;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:NA19239_ch_T0000578:1;Name=LOC102725532;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23593328	23593871	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=NA19239_ch_T0000578;gene_id=NA19239_ch_G0000211;Parent=NA19239_ch_T0000578;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:NA19239_ch_T0000578:1;Name=LOC102725532;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23593872	23594068	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=NA19239_ch_T0000578;gene_id=NA19239_ch_G0000211;Parent=NA19239_ch_T0000578;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:NA19239_ch_T0000578:2;Name=LOC102725532;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23594069	23594188	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=NA19239_ch_T0000578;gene_id=NA19239_ch_G0000211;Parent=NA19239_ch_T0000578;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:NA19239_ch_T0000578:2;Name=LOC102725532;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23594189	23594274	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=NA19239_ch_T0000578;gene_id=NA19239_ch_G0000211;Parent=NA19239_ch_T0000578;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:NA19239_ch_T0000578:3;Name=LOC102725532;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23594275	23596074	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=NA19239_ch_T0000578;gene_id=NA19239_ch_G0000211;Parent=NA19239_ch_T0000578;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:NA19239_ch_T0000578:3;Name=LOC102725532;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23596075	23596410	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=NA19239_ch_T0000578;gene_id=NA19239_ch_G0000211;Parent=NA19239_ch_T0000578;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:NA19239_ch_T0000578:4;Name=LOC102725532;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23596411	23597876	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=NA19239_ch_T0000578;gene_id=NA19239_ch_G0000211;Parent=NA19239_ch_T0000578;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:NA19239_ch_T0000578:4;Name=LOC102725532;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23597877	23597966	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=NA19239_ch_T0000578;gene_id=NA19239_ch_G0000211;Parent=NA19239_ch_T0000578;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:NA19239_ch_T0000578:5;Name=LOC102725532;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23597967	23611593	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=NA19239_ch_T0000578;gene_id=NA19239_ch_G0000211;Parent=NA19239_ch_T0000578;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:NA19239_ch_T0000578:5;Name=LOC102725532;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23611594	23611947	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=NA19239_ch_T0000578;gene_id=NA19239_ch_G0000211;Parent=NA19239_ch_T0000578;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:NA19239_ch_T0000578:6;Name=LOC102725532;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23611948	23612377	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=NA19239_ch_T0000578;gene_id=NA19239_ch_G0000211;Parent=NA19239_ch_T0000578;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:NA19239_ch_T0000578:6;Name=LOC102725532;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23612378	23612496	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=NA19239_ch_T0000578;gene_id=NA19239_ch_G0000211;Parent=NA19239_ch_T0000578;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:NA19239_ch_T0000578:7;Name=LOC102725532;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23612497	23619675	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=NA19239_ch_T0000578;gene_id=NA19239_ch_G0000211;Parent=NA19239_ch_T0000578;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:NA19239_ch_T0000578:7;Name=LOC102725532;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23619676	23619761	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=NA19239_ch_T0000578;gene_id=NA19239_ch_G0000211;Parent=NA19239_ch_T0000578;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:NA19239_ch_T0000578:8;Name=LOC102725532;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23619762	23620069	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=NA19239_ch_T0000578;gene_id=NA19239_ch_G0000211;Parent=NA19239_ch_T0000578;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:NA19239_ch_T0000578:8;Name=LOC102725532;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23620070	23620292	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=NA19239_ch_T0000578;gene_id=NA19239_ch_G0000211;Parent=NA19239_ch_T0000578;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:NA19239_ch_T0000578:9;Name=LOC102725532;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23620293	23630263	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=NA19239_ch_T0000578;gene_id=NA19239_ch_G0000211;Parent=NA19239_ch_T0000578;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:NA19239_ch_T0000578:9;Name=LOC102725532;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23630264	23630404	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=NA19239_ch_T0000578;gene_id=NA19239_ch_G0000211;Parent=NA19239_ch_T0000578;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:NA19239_ch_T0000578:10;Name=LOC102725532;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23630405	23636949	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=NA19239_ch_T0000578;gene_id=NA19239_ch_G0000211;Parent=NA19239_ch_T0000578;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:NA19239_ch_T0000578:10;Name=LOC102725532;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23636950	23637259	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=NA19239_ch_T0000578;gene_id=NA19239_ch_G0000211;Parent=NA19239_ch_T0000578;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:NA19239_ch_T0000578:11;Name=LOC102725532;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23637260	23637593	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=NA19239_ch_T0000578;gene_id=NA19239_ch_G0000211;Parent=NA19239_ch_T0000578;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:NA19239_ch_T0000578:11;Name=LOC102725532;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23637594	23637850	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1,hg002_chrY_paternal_487.1;transcript_id=NA19239_ch_T0000578;gene_id=NA19239_ch_G0000211;Parent=NA19239_ch_T0000578;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:NA19239_ch_T0000578:12;Name=LOC102725532;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	23635297	23637144	.	+	.	source_gene_common_name=TTTY6B;source_gene=hg002_chrY_paternal_488;alternative_source_transcripts=hg002_chrY_paternal_488.1,hg002_chrY_paternal_488.1;gene_id=NA19239_ch_G0000212;gene_biotype=lncRNA;gene_name=TTTY6B;gene_sources=liftoff;ID=NA19239_ch_G0000212;Name=TTTY6B
NA19239_chrY	CAT	transcript	23635297	23637144	1000	+	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=hg002_chrY_paternal_488.1,hg002_chrY_paternal_488.1;transcript_id=NA19239_ch_T0000579;gene_id=NA19239_ch_G0000212;Parent=NA19239_ch_G0000212;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=NA19239_ch_T0000579;Name=TTTY6B
NA19239_chrY	CAT	exon	23635297	23635389	.	+	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=hg002_chrY_paternal_488.1,hg002_chrY_paternal_488.1;transcript_id=NA19239_ch_T0000579;gene_id=NA19239_ch_G0000212;Parent=NA19239_ch_T0000579;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=exon:NA19239_ch_T0000579:0;Name=TTTY6B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23635390	23635607	.	+	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=hg002_chrY_paternal_488.1,hg002_chrY_paternal_488.1;transcript_id=NA19239_ch_T0000579;gene_id=NA19239_ch_G0000212;Parent=NA19239_ch_T0000579;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=intron:NA19239_ch_T0000579:0;Name=TTTY6B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23635608	23635745	.	+	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=hg002_chrY_paternal_488.1,hg002_chrY_paternal_488.1;transcript_id=NA19239_ch_T0000579;gene_id=NA19239_ch_G0000212;Parent=NA19239_ch_T0000579;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=exon:NA19239_ch_T0000579:1;Name=TTTY6B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23635746	23636902	.	+	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=hg002_chrY_paternal_488.1,hg002_chrY_paternal_488.1;transcript_id=NA19239_ch_T0000579;gene_id=NA19239_ch_G0000212;Parent=NA19239_ch_T0000579;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=intron:NA19239_ch_T0000579:1;Name=TTTY6B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23636903	23637144	.	+	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=hg002_chrY_paternal_488.1,hg002_chrY_paternal_488.1;transcript_id=NA19239_ch_T0000579;gene_id=NA19239_ch_G0000212;Parent=NA19239_ch_T0000579;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=exon:NA19239_ch_T0000579:2;Name=TTTY6B;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	23651865	23673325	.	-	.	source_gene_common_name=RBMY1J;source_gene=hg002_chrY_paternal_489;alternative_source_transcripts=hg002_chrY_paternal_489.1;gene_id=NA19239_ch_G0000213;gene_biotype=protein_coding;gene_name=RBMY1J;gene_sources=liftoff,augTM;ID=NA19239_ch_G0000213;Name=RBMY1J
NA19239_chrY	CAT	transcript	23651865	23673325	100	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_G0000213;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=NA19239_ch_T0000580;Name=RBMY1J
NA19239_chrY	CAT	exon	23651865	23653368	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000580:0;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23653358	23653368	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000580:0;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	23653358	23653360	.	-	0	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=stop_codon:NA19239_ch_T0000580;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23653369	23655961	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000580:0;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23655962	23656108	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000580:1;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23655962	23656108	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000580:1;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23656109	23659841	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000580:1;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23659842	23659930	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000580:2;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23659842	23659930	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000580:2;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23659931	23660016	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000580:2;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23660017	23660127	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000580:3;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23660017	23660127	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000580:3;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23660128	23661050	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000580:3;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23661051	23661161	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000580:4;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23661051	23661161	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000580:4;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23661162	23661595	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000580:4;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23661596	23661706	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000580:5;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23661596	23661706	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000580:5;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23661707	23662146	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000580:5;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23662147	23662257	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000580:6;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23662147	23662257	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000580:6;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23662258	23663212	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000580:6;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23663213	23663327	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000580:7;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23663213	23663327	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000580:7;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23663328	23665337	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000580:7;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23665338	23665490	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000580:8;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23665338	23665490	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000580:8;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23665491	23667405	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000580:8;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23667406	23667583	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000580:9;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23667406	23667583	.	-	0	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000580:9;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23667584	23670607	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000580:9;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23670608	23670711	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000580:10;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23670608	23670711	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000580:10;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23670712	23671177	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000580:10;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23671178	23671290	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000580:11;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23671178	23671286	.	-	0	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000580:11;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23671284	23671286	.	-	0	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=start_codon:NA19239_ch_T0000580;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23671291	23673151	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000580:11;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23673152	23673325	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000580;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000580;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000580:12;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	23658854	23670699	100	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000581;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_G0000213;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=NA19239_ch_T0000581;Name=RBMY1J
NA19239_chrY	CAT	exon	23658854	23659430	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000581;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000581;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000581:0;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23659132	23659430	.	-	2	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000581;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000581;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000581:0;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	23659132	23659134	.	-	0	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000581;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000581;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=stop_codon:NA19239_ch_T0000581;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23659431	23659841	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000581;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000581;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000581:0;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23659842	23659930	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000581;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000581;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000581:1;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23659842	23659930	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000581;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000581;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000581:1;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23659931	23660016	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000581;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000581;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000581:1;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23660017	23660127	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000581;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000581;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000581:2;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23660017	23660127	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000581;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000581;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000581:2;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23660128	23661050	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000581;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000581;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000581:2;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23661051	23661161	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000581;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000581;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000581:3;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23661051	23661161	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000581;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000581;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000581:3;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23661162	23661595	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000581;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000581;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000581:3;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23661596	23661706	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000581;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000581;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000581:4;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23661596	23661706	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000581;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000581;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000581:4;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23661707	23662146	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000581;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000581;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000581:4;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23662147	23662257	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000581;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000581;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000581:5;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23662147	23662257	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000581;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000581;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000581:5;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23662258	23663212	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000581;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000581;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000581:5;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23663213	23663327	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000581;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000581;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000581:6;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23663213	23663327	.	-	2	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000581;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000581;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000581:6;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23663328	23665337	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000581;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000581;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000581:6;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23665338	23665490	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000581;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000581;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000581:7;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23665338	23665461	.	-	0	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000581;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000581;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000581:7;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23665459	23665461	.	-	0	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000581;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000581;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=start_codon:NA19239_ch_T0000581;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23665491	23670607	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000581;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000581;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000581:7;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23670608	23670699	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000581;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000581;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000581:8;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	23658854	23673325	100	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000582;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_G0000213;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=NA19239_ch_T0000582;Name=RBMY1J
NA19239_chrY	CAT	exon	23658854	23659430	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000582;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000582;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000582:0;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23659132	23659430	.	-	2	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000582;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000582;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000582:0;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	23659132	23659134	.	-	0	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000582;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000582;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=stop_codon:NA19239_ch_T0000582;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23659431	23659841	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000582;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000582;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000582:0;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23659842	23659930	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000582;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000582;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000582:1;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23659842	23659930	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000582;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000582;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000582:1;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23659931	23660016	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000582;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000582;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000582:1;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23660017	23660127	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000582;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000582;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000582:2;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23660017	23660127	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000582;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000582;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000582:2;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23660128	23661050	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000582;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000582;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000582:2;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23661051	23661161	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000582;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000582;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000582:3;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23661051	23661161	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000582;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000582;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000582:3;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23661162	23661595	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000582;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000582;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000582:3;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23661596	23661706	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000582;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000582;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000582:4;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23661596	23661706	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000582;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000582;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000582:4;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23661707	23662146	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000582;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000582;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000582:4;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23662147	23662257	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000582;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000582;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000582:5;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23662147	23662257	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000582;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000582;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000582:5;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23662258	23663212	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000582;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000582;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000582:5;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23663213	23663327	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000582;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000582;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000582:6;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23663213	23663327	.	-	2	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000582;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000582;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000582:6;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23663328	23665337	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000582;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000582;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000582:6;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23665338	23665490	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000582;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000582;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000582:7;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23665338	23665490	.	-	2	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000582;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000582;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000582:7;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23665491	23667405	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000582;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000582;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000582:7;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23667406	23667583	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000582;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000582;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000582:8;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23667406	23667583	.	-	0	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000582;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000582;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000582:8;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23667584	23670607	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000582;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000582;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000582:8;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23670608	23670711	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000582;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000582;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000582:9;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23670608	23670711	.	-	2	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000582;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000582;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000582:9;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23670712	23671177	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000582;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000582;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000582:9;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23671178	23671290	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000582;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000582;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000582:10;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23671178	23671286	.	-	0	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000582;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000582;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000582:10;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23671284	23671286	.	-	0	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000582;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000582;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=start_codon:NA19239_ch_T0000582;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23671291	23673151	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000582;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000582;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000582:10;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23673152	23673325	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000582;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000582;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000582:11;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	23658854	23673325	100	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000583;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_G0000213;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=NA19239_ch_T0000583;Name=RBMY1J
NA19239_chrY	CAT	exon	23658854	23659430	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000583;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000583;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000583:0;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23659132	23659430	.	-	2	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000583;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000583;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000583:0;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	23659132	23659134	.	-	0	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000583;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000583;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=stop_codon:NA19239_ch_T0000583;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23659431	23659841	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000583;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000583;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000583:0;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23659842	23659930	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000583;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000583;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000583:1;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23659842	23659930	.	-	1	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000583;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000583;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000583:1;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23659931	23661050	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000583;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000583;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000583:1;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23661051	23661161	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000583;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000583;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000583:2;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23661051	23661161	.	-	1	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000583;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000583;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000583:2;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23661162	23661595	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000583;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000583;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000583:2;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23661596	23661706	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000583;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000583;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000583:3;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23661596	23661706	.	-	1	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000583;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000583;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000583:3;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23661707	23662146	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000583;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000583;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000583:3;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23662147	23662257	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000583;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000583;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000583:4;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23662147	23662257	.	-	1	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000583;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000583;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000583:4;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23662258	23663212	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000583;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000583;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000583:4;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23663213	23663327	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000583;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000583;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000583:5;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23663213	23663327	.	-	2	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000583;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000583;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000583:5;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23663328	23665337	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000583;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000583;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000583:5;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23665338	23665490	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000583;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000583;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000583:6;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23665338	23665490	.	-	2	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000583;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000583;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000583:6;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23665491	23667405	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000583;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000583;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000583:6;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23667406	23667583	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000583;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000583;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000583:7;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23667406	23667583	.	-	0	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000583;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000583;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000583:7;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23667584	23670607	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000583;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000583;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000583:7;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23670608	23670711	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000583;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000583;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000583:8;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23670608	23670711	.	-	2	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000583;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000583;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000583:8;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23670712	23671177	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000583;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000583;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000583:8;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23671178	23671290	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000583;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000583;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000583:9;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23671178	23671286	.	-	0	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000583;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000583;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19239_ch_T0000583:9;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23671284	23671286	.	-	0	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000583;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000583;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=start_codon:NA19239_ch_T0000583;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23671291	23673151	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000583;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000583;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19239_ch_T0000583:9;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23673152	23673325	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000583;gene_id=NA19239_ch_G0000213;Parent=NA19239_ch_T0000583;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19239_ch_T0000583:10;Name=RBMY1J;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	23787083	23789161	.	-	.	source_gene_common_name=TTTY5;source_gene=hg002_chrY_paternal_497;gene_id=NA19239_ch_G0000214;gene_biotype=lncRNA;gene_name=TTTY5;gene_sources=liftoff;ID=NA19239_ch_G0000214;Name=TTTY5
NA19239_chrY	CAT	transcript	23787083	23789161	1000	-	.	source_transcript=hg002_chrY_paternal_497.1;source_transcript_name=hg002_chrY_paternal_497.1;source_gene=hg002_chrY_paternal_497;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_497;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_497.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_497.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;transcript_id=NA19239_ch_T0000584;gene_id=NA19239_ch_G0000214;Parent=NA19239_ch_G0000214;transcript_name=hg002_chrY_paternal_497.1;gene_name=TTTY5;ID=NA19239_ch_T0000584;Name=TTTY5
NA19239_chrY	CAT	exon	23787083	23788073	.	-	.	source_transcript=hg002_chrY_paternal_497.1;source_transcript_name=hg002_chrY_paternal_497.1;source_gene=hg002_chrY_paternal_497;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_497;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_497.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_497.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;transcript_id=NA19239_ch_T0000584;gene_id=NA19239_ch_G0000214;Parent=NA19239_ch_T0000584;transcript_name=hg002_chrY_paternal_497.1;gene_name=TTTY5;ID=exon:NA19239_ch_T0000584:0;Name=TTTY5;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23788074	23788590	.	-	.	source_transcript=hg002_chrY_paternal_497.1;source_transcript_name=hg002_chrY_paternal_497.1;source_gene=hg002_chrY_paternal_497;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_497;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_497.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_497.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;transcript_id=NA19239_ch_T0000584;gene_id=NA19239_ch_G0000214;Parent=NA19239_ch_T0000584;transcript_name=hg002_chrY_paternal_497.1;gene_name=TTTY5;ID=intron:NA19239_ch_T0000584:0;Name=TTTY5;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23788591	23789161	.	-	.	source_transcript=hg002_chrY_paternal_497.1;source_transcript_name=hg002_chrY_paternal_497.1;source_gene=hg002_chrY_paternal_497;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_497;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_497.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_497.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;transcript_id=NA19239_ch_T0000584;gene_id=NA19239_ch_G0000214;Parent=NA19239_ch_T0000584;transcript_name=hg002_chrY_paternal_497.1;gene_name=TTTY5;ID=exon:NA19239_ch_T0000584:1;Name=TTTY5;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	23799148	23806498	.	+	.	source_gene_common_name=RBMY2FP;source_gene=hg002_chrY_paternal_495;alternative_source_transcripts=hg002_chrY_paternal_495.1;gene_id=NA19239_ch_G0000215;gene_biotype=transcribed_pseudogene;gene_name=RBMY2FP;gene_sources=liftoff;ID=NA19239_ch_G0000215;Name=RBMY2FP
NA19239_chrY	CAT	transcript	23799148	23806498	1000	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=NA19239_ch_T0000585;gene_id=NA19239_ch_G0000215;Parent=NA19239_ch_G0000215;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=NA19239_ch_T0000585;Name=RBMY2FP
NA19239_chrY	CAT	exon	23799148	23799259	.	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=NA19239_ch_T0000585;gene_id=NA19239_ch_G0000215;Parent=NA19239_ch_T0000585;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=exon:NA19239_ch_T0000585:0;Name=RBMY2FP;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23799260	23801148	.	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=NA19239_ch_T0000585;gene_id=NA19239_ch_G0000215;Parent=NA19239_ch_T0000585;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=intron:NA19239_ch_T0000585:0;Name=RBMY2FP;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23801149	23801261	.	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=NA19239_ch_T0000585;gene_id=NA19239_ch_G0000215;Parent=NA19239_ch_T0000585;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=exon:NA19239_ch_T0000585:1;Name=RBMY2FP;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23801262	23801683	.	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=NA19239_ch_T0000585;gene_id=NA19239_ch_G0000215;Parent=NA19239_ch_T0000585;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=intron:NA19239_ch_T0000585:1;Name=RBMY2FP;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23801684	23801787	.	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=NA19239_ch_T0000585;gene_id=NA19239_ch_G0000215;Parent=NA19239_ch_T0000585;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=exon:NA19239_ch_T0000585:2;Name=RBMY2FP;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23801788	23804781	.	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=NA19239_ch_T0000585;gene_id=NA19239_ch_G0000215;Parent=NA19239_ch_T0000585;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=intron:NA19239_ch_T0000585:2;Name=RBMY2FP;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23804782	23806498	.	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=NA19239_ch_T0000585;gene_id=NA19239_ch_G0000215;Parent=NA19239_ch_T0000585;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=exon:NA19239_ch_T0000585:3;Name=RBMY2FP;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	23806971	23810677	.	+	.	source_gene_common_name=LOC100652931;source_gene=hg002_chrY_paternal_494;gene_id=NA19239_ch_G0000216;gene_biotype=transcribed_pseudogene;gene_name=LOC100652931;gene_sources=liftoff;ID=NA19239_ch_G0000216;Name=LOC100652931
NA19239_chrY	CAT	transcript	23806971	23810677	1000	+	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;transcript_id=NA19239_ch_T0000586;gene_id=NA19239_ch_G0000216;Parent=NA19239_ch_G0000216;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=NA19239_ch_T0000586;Name=LOC100652931
NA19239_chrY	CAT	exon	23806971	23807040	.	+	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;transcript_id=NA19239_ch_T0000586;gene_id=NA19239_ch_G0000216;Parent=NA19239_ch_T0000586;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=exon:NA19239_ch_T0000586:0;Name=LOC100652931;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23807041	23809075	.	+	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;transcript_id=NA19239_ch_T0000586;gene_id=NA19239_ch_G0000216;Parent=NA19239_ch_T0000586;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=intron:NA19239_ch_T0000586:0;Name=LOC100652931;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23809076	23809190	.	+	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;transcript_id=NA19239_ch_T0000586;gene_id=NA19239_ch_G0000216;Parent=NA19239_ch_T0000586;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=exon:NA19239_ch_T0000586:1;Name=LOC100652931;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23809191	23810655	.	+	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;transcript_id=NA19239_ch_T0000586;gene_id=NA19239_ch_G0000216;Parent=NA19239_ch_T0000586;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=intron:NA19239_ch_T0000586:1;Name=LOC100652931;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23810656	23810677	.	+	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;transcript_id=NA19239_ch_T0000586;gene_id=NA19239_ch_G0000216;Parent=NA19239_ch_T0000586;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=exon:NA19239_ch_T0000586:2;Name=LOC100652931;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	23854124	23857830	.	-	.	source_gene_common_name=LOC100652931;source_gene=hg002_chrY_paternal_494;alternative_source_transcripts=hg002_chrY_paternal_494.1,hg002_chrY_paternal_494.1;gene_id=NA19239_ch_G0000217;gene_biotype=transcribed_pseudogene;gene_name=LOC100652931;gene_sources=liftoff;ID=NA19239_ch_G0000217;Name=LOC100652931
NA19239_chrY	CAT	transcript	23854124	23857830	1000	-	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1,hg002_chrY_paternal_494.1;transcript_id=NA19239_ch_T0000587;gene_id=NA19239_ch_G0000217;Parent=NA19239_ch_G0000217;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=NA19239_ch_T0000587;Name=LOC100652931
NA19239_chrY	CAT	exon	23854124	23854145	.	-	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1,hg002_chrY_paternal_494.1;transcript_id=NA19239_ch_T0000587;gene_id=NA19239_ch_G0000217;Parent=NA19239_ch_T0000587;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=exon:NA19239_ch_T0000587:0;Name=LOC100652931;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23854146	23855610	.	-	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1,hg002_chrY_paternal_494.1;transcript_id=NA19239_ch_T0000587;gene_id=NA19239_ch_G0000217;Parent=NA19239_ch_T0000587;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=intron:NA19239_ch_T0000587:0;Name=LOC100652931;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23855611	23855725	.	-	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1,hg002_chrY_paternal_494.1;transcript_id=NA19239_ch_T0000587;gene_id=NA19239_ch_G0000217;Parent=NA19239_ch_T0000587;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=exon:NA19239_ch_T0000587:1;Name=LOC100652931;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23855726	23857760	.	-	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1,hg002_chrY_paternal_494.1;transcript_id=NA19239_ch_T0000587;gene_id=NA19239_ch_G0000217;Parent=NA19239_ch_T0000587;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=intron:NA19239_ch_T0000587:1;Name=LOC100652931;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23857761	23857830	.	-	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1,hg002_chrY_paternal_494.1;transcript_id=NA19239_ch_T0000587;gene_id=NA19239_ch_G0000217;Parent=NA19239_ch_T0000587;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=exon:NA19239_ch_T0000587:2;Name=LOC100652931;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	23858303	23865649	.	-	.	source_gene_common_name=RBMY2FP;source_gene=hg002_chrY_paternal_495;alternative_source_transcripts=hg002_chrY_paternal_495.1;gene_id=NA19239_ch_G0000218;gene_biotype=transcribed_pseudogene;gene_name=RBMY2FP;gene_sources=liftoff;ID=NA19239_ch_G0000218;Name=RBMY2FP
NA19239_chrY	CAT	transcript	23858303	23865649	1000	-	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=NA19239_ch_T0000588;gene_id=NA19239_ch_G0000218;Parent=NA19239_ch_G0000218;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=NA19239_ch_T0000588;Name=RBMY2FP
NA19239_chrY	CAT	exon	23858303	23860015	.	-	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=NA19239_ch_T0000588;gene_id=NA19239_ch_G0000218;Parent=NA19239_ch_T0000588;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=exon:NA19239_ch_T0000588:0;Name=RBMY2FP;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23860016	23863009	.	-	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=NA19239_ch_T0000588;gene_id=NA19239_ch_G0000218;Parent=NA19239_ch_T0000588;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=intron:NA19239_ch_T0000588:0;Name=RBMY2FP;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23863010	23863113	.	-	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=NA19239_ch_T0000588;gene_id=NA19239_ch_G0000218;Parent=NA19239_ch_T0000588;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=exon:NA19239_ch_T0000588:1;Name=RBMY2FP;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23863114	23863535	.	-	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=NA19239_ch_T0000588;gene_id=NA19239_ch_G0000218;Parent=NA19239_ch_T0000588;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=intron:NA19239_ch_T0000588:1;Name=RBMY2FP;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23863536	23863648	.	-	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=NA19239_ch_T0000588;gene_id=NA19239_ch_G0000218;Parent=NA19239_ch_T0000588;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=exon:NA19239_ch_T0000588:2;Name=RBMY2FP;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23863649	23865537	.	-	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=NA19239_ch_T0000588;gene_id=NA19239_ch_G0000218;Parent=NA19239_ch_T0000588;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=intron:NA19239_ch_T0000588:2;Name=RBMY2FP;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23865538	23865649	.	-	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=NA19239_ch_T0000588;gene_id=NA19239_ch_G0000218;Parent=NA19239_ch_T0000588;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=exon:NA19239_ch_T0000588:3;Name=RBMY2FP;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	23875636	23877714	.	+	.	source_gene_common_name=TTTY5;source_gene=hg002_chrY_paternal_497;alternative_source_transcripts=hg002_chrY_paternal_497.1,hg002_chrY_paternal_497.1;gene_id=NA19239_ch_G0000219;gene_biotype=lncRNA;gene_name=TTTY5;gene_sources=liftoff;ID=NA19239_ch_G0000219;Name=TTTY5
NA19239_chrY	CAT	transcript	23875636	23877714	1000	+	.	source_transcript=hg002_chrY_paternal_497.1;source_transcript_name=hg002_chrY_paternal_497.1;source_gene=hg002_chrY_paternal_497;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_497;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_497.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_497.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=hg002_chrY_paternal_497.1,hg002_chrY_paternal_497.1;transcript_id=NA19239_ch_T0000589;gene_id=NA19239_ch_G0000219;Parent=NA19239_ch_G0000219;transcript_name=hg002_chrY_paternal_497.1;gene_name=TTTY5;ID=NA19239_ch_T0000589;Name=TTTY5
NA19239_chrY	CAT	exon	23875636	23876206	.	+	.	source_transcript=hg002_chrY_paternal_497.1;source_transcript_name=hg002_chrY_paternal_497.1;source_gene=hg002_chrY_paternal_497;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_497;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_497.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_497.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=hg002_chrY_paternal_497.1,hg002_chrY_paternal_497.1;transcript_id=NA19239_ch_T0000589;gene_id=NA19239_ch_G0000219;Parent=NA19239_ch_T0000589;transcript_name=hg002_chrY_paternal_497.1;gene_name=TTTY5;ID=exon:NA19239_ch_T0000589:0;Name=TTTY5;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23876207	23876723	.	+	.	source_transcript=hg002_chrY_paternal_497.1;source_transcript_name=hg002_chrY_paternal_497.1;source_gene=hg002_chrY_paternal_497;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_497;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_497.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_497.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=hg002_chrY_paternal_497.1,hg002_chrY_paternal_497.1;transcript_id=NA19239_ch_T0000589;gene_id=NA19239_ch_G0000219;Parent=NA19239_ch_T0000589;transcript_name=hg002_chrY_paternal_497.1;gene_name=TTTY5;ID=intron:NA19239_ch_T0000589:0;Name=TTTY5;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23876724	23877714	.	+	.	source_transcript=hg002_chrY_paternal_497.1;source_transcript_name=hg002_chrY_paternal_497.1;source_gene=hg002_chrY_paternal_497;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_497;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_497.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_497.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=hg002_chrY_paternal_497.1,hg002_chrY_paternal_497.1;transcript_id=NA19239_ch_T0000589;gene_id=NA19239_ch_G0000219;Parent=NA19239_ch_T0000589;transcript_name=hg002_chrY_paternal_497.1;gene_name=TTTY5;ID=exon:NA19239_ch_T0000589:1;Name=TTTY5;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	23991578	24011620	.	+	.	source_gene_common_name=RBMY1F;source_gene=hg002_chrY_paternal_502;alternative_source_transcripts=hg002_chrY_paternal_502.1;gene_id=NA19239_ch_G0000220;gene_biotype=protein_coding;gene_name=RBMY1F;gene_sources=liftoff,augTM;ID=NA19239_ch_G0000220;Name=RBMY1F
NA19239_chrY	CAT	transcript	23991578	24005963	100	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000590;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_G0000220;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=NA19239_ch_T0000590;Name=RBMY1F
NA19239_chrY	CAT	exon	23991578	23991666	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000590;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000590;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000590:0;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23991667	23993527	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000590;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000590;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000590:0;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23993528	23993640	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000590;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000590;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000590:1;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23993532	23993640	.	+	0	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000590;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000590;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000590:0;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23993532	23993534	.	+	0	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000590;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000590;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:NA19239_ch_T0000590;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23993641	23994106	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000590;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000590;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000590:1;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23994107	23994210	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000590;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000590;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000590:2;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23994107	23994210	.	+	2	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000590;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000590;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000590:1;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23994211	23997233	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000590;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000590;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000590:2;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23997234	23997411	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000590;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000590;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000590:3;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23997234	23997411	.	+	0	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000590;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000590;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000590:2;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23997412	23999326	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000590;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000590;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000590:3;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23999327	23999479	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000590;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000590;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000590:4;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23999327	23999479	.	+	2	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000590;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000590;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000590:3;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23999480	24001489	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000590;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000590;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000590:4;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24001490	24001604	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000590;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000590;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000590:5;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24001490	24001604	.	+	2	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000590;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000590;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000590:4;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24001605	24002559	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000590;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000590;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000590:5;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24002560	24002670	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000590;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000590;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000590:6;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24002560	24002670	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000590;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000590;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000590:5;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24002671	24003110	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000590;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000590;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000590:6;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24003111	24003221	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000590;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000590;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000590:7;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24003111	24003221	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000590;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000590;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000590:6;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24003222	24003655	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000590;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000590;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000590:7;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24003656	24003766	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000590;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000590;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000590:8;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24003656	24003766	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000590;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000590;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000590:7;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24003767	24004689	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000590;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000590;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000590:8;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24004690	24004800	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000590;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000590;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000590:9;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24004690	24004800	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000590;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000590;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000590:8;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24004801	24004886	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000590;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000590;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000590:9;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24004887	24004970	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000590;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000590;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000590:10;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24004887	24004970	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000590;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000590;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000590:9;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24004971	24005386	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000590;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000590;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000590:10;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24005387	24005963	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000590;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000590;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000590:11;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24005387	24005459	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000590;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000590;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000590:10;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	24005457	24005459	.	+	0	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000590;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000590;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:NA19239_ch_T0000590;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	23991578	24005963	100	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000591;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_G0000220;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=NA19239_ch_T0000591;Name=RBMY1F
NA19239_chrY	CAT	exon	23991578	23991666	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000591;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000591;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000591:0;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23991667	23993527	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000591;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000591;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000591:0;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23993528	23993640	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000591;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000591;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000591:1;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23993532	23993640	.	+	0	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000591;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000591;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000591:0;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23993532	23993534	.	+	0	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000591;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000591;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:NA19239_ch_T0000591;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23993641	23994106	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000591;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000591;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000591:1;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23994107	23994210	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000591;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000591;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000591:2;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23994107	23994210	.	+	2	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000591;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000591;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000591:1;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23994211	23997233	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000591;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000591;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000591:2;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23997234	23997411	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000591;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000591;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000591:3;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23997234	23997411	.	+	0	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000591;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000591;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000591:2;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23997412	23999326	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000591;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000591;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000591:3;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23999327	23999479	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000591;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000591;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000591:4;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23999327	23999479	.	+	2	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000591;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000591;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000591:3;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23999480	24001489	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000591;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000591;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000591:4;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24001490	24001604	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000591;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000591;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000591:5;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24001490	24001604	.	+	2	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000591;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000591;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000591:4;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24001605	24002559	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000591;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000591;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000591:5;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24002560	24002670	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000591;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000591;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000591:6;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24002560	24002670	.	+	1	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000591;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000591;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000591:5;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24002671	24003110	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000591;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000591;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000591:6;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24003111	24003221	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000591;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000591;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000591:7;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24003111	24003221	.	+	1	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000591;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000591;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000591:6;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24003222	24003655	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000591;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000591;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000591:7;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24003656	24003766	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000591;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000591;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000591:8;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24003656	24003766	.	+	1	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000591;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000591;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000591:7;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24003767	24004886	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000591;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000591;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000591:8;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24004887	24004975	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000591;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000591;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000591:9;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24004887	24004975	.	+	1	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000591;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000591;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000591:8;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24004976	24005386	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000591;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000591;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000591:9;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24005387	24005963	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000591;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000591;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000591:10;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24005387	24005685	.	+	2	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000591;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000591;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000591:9;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	24005683	24005685	.	+	0	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000591;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000591;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:NA19239_ch_T0000591;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	23991578	24005963	100	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000592;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_G0000220;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=NA19239_ch_T0000592;Name=RBMY1F
NA19239_chrY	CAT	exon	23991578	23991666	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000592;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000592;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000592:0;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23991667	23993527	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000592;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000592;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000592:0;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23993528	23993640	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000592;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000592;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000592:1;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23993532	23993640	.	+	0	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000592;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000592;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000592:0;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23993532	23993534	.	+	0	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000592;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000592;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:NA19239_ch_T0000592;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23993641	23994106	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000592;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000592;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000592:1;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23994107	23994210	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000592;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000592;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000592:2;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23994107	23994210	.	+	2	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000592;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000592;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000592:1;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23994211	23997233	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000592;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000592;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000592:2;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23997234	23997411	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000592;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000592;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000592:3;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23997234	23997411	.	+	0	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000592;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000592;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000592:2;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23997412	23999326	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000592;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000592;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000592:3;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23999327	23999479	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000592;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000592;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000592:4;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23999327	23999479	.	+	2	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000592;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000592;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000592:3;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23999480	24001489	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000592;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000592;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000592:4;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24001490	24001604	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000592;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000592;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000592:5;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24001490	24001604	.	+	2	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000592;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000592;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000592:4;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24001605	24002559	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000592;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000592;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000592:5;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24002560	24002670	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000592;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000592;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000592:6;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24002560	24002670	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000592;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000592;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000592:5;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24002671	24003110	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000592;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000592;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000592:6;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24003111	24003221	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000592;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000592;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000592:7;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24003111	24003221	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000592;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000592;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000592:6;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24003222	24003655	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000592;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000592;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000592:7;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24003656	24003766	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000592;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000592;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000592:8;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24003656	24003766	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000592;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000592;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000592:7;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24003767	24004689	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000592;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000592;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000592:8;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24004690	24004800	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000592;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000592;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000592:9;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24004690	24004800	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000592;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000592;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000592:8;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24004801	24004886	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000592;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000592;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000592:9;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24004887	24004975	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000592;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000592;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000592:10;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24004887	24004975	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000592;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000592;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000592:9;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24004976	24005386	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000592;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000592;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000592:10;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24005387	24005963	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000592;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000592;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000592:11;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24005387	24005685	.	+	2	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000592;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000592;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000592:10;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	24005683	24005685	.	+	0	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000592;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000592;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:NA19239_ch_T0000592;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	23991578	24011620	100	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_G0000220;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=NA19239_ch_T0000593;Name=RBMY1F
NA19239_chrY	CAT	exon	23991578	23991666	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000593:0;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23991667	23993527	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000593:0;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23993528	23993640	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000593:1;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23993532	23993640	.	+	0	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000593:0;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23993532	23993534	.	+	0	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:NA19239_ch_T0000593;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23993641	23994106	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000593:1;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23994107	23994210	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000593:2;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23994107	23994210	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000593:1;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23994211	23997233	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000593:2;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23997234	23997411	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000593:3;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23997234	23997411	.	+	0	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000593:2;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23997412	23999326	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000593:3;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23999327	23999479	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000593:4;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23999327	23999479	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000593:3;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23999480	24001489	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000593:4;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24001490	24001604	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000593:5;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24001490	24001604	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000593:4;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24001605	24002559	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000593:5;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24002560	24002670	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000593:6;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24002560	24002670	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000593:5;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24002671	24003110	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000593:6;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24003111	24003221	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000593:7;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24003111	24003221	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000593:6;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24003222	24003655	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000593:7;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24003656	24003766	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000593:8;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24003656	24003766	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000593:7;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24003767	24004689	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000593:8;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24004690	24004800	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000593:9;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24004690	24004800	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000593:8;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24004801	24004886	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000593:9;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24004887	24004975	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000593:10;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24004887	24004975	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000593:9;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24004976	24008708	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000593:10;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24008709	24008855	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000593:11;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24008709	24008855	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000593:10;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24008856	24011448	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000593:11;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24011449	24011620	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000593:12;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24011449	24011459	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000593:11;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	24011457	24011459	.	+	0	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000593;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000593;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:NA19239_ch_T0000593;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	23991578	24011620	100	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000594;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_G0000220;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=NA19239_ch_T0000594;Name=RBMY1F
NA19239_chrY	CAT	exon	23991578	23991666	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000594;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000594;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000594:0;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23991667	23993527	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000594;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000594;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000594:0;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23993528	23993640	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000594;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000594;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000594:1;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23993532	23993640	.	+	0	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000594;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000594;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000594:0;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23993532	23993534	.	+	0	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000594;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000594;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:NA19239_ch_T0000594;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23993641	23994106	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000594;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000594;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000594:1;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23994107	23994210	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000594;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000594;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000594:2;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23994107	23994210	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000594;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000594;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000594:1;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23994211	23997233	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000594;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000594;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000594:2;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23997234	23997411	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000594;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000594;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000594:3;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23997234	23997411	.	+	0	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000594;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000594;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000594:2;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23997412	23999326	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000594;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000594;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000594:3;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23999327	23999479	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000594;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000594;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000594:4;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23999327	23999479	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000594;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000594;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000594:3;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23999480	24001489	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000594;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000594;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000594:4;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24001490	24001604	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000594;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000594;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000594:5;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24001490	24001604	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000594;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000594;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000594:4;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24001605	24002559	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000594;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000594;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000594:5;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24002560	24002670	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000594;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000594;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000594:6;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24002560	24002670	.	+	1	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000594;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000594;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000594:5;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24002671	24003110	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000594;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000594;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000594:6;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24003111	24003221	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000594;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000594;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000594:7;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24003111	24003221	.	+	1	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000594;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000594;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000594:6;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24003222	24003655	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000594;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000594;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000594:7;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24003656	24003766	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000594;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000594;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000594:8;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24003656	24003766	.	+	1	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000594;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000594;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000594:7;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24003767	24004886	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000594;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000594;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000594:8;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24004887	24004975	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000594;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000594;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000594:9;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24004887	24004975	.	+	1	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000594;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000594;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000594:8;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24004976	24008708	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000594;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000594;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000594:9;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24008709	24008855	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000594;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000594;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000594:10;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24008709	24008855	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000594;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000594;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000594:9;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24008856	24011448	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000594;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000594;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000594:10;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24011449	24011620	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000594;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000594;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000594:11;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24011449	24011459	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000594;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000594;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000594:10;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	24011457	24011459	.	+	0	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000594;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000594;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:NA19239_ch_T0000594;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	23991578	24011620	100	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000595;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_G0000220;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=NA19239_ch_T0000595;Name=RBMY1F
NA19239_chrY	CAT	exon	23991578	23991666	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000595;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000595;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000595:0;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23991667	23993527	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000595;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000595;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000595:0;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23993528	23993640	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000595;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000595;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000595:1;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23993532	23993640	.	+	0	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000595;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000595;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000595:0;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	23993532	23993534	.	+	0	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000595;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000595;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:NA19239_ch_T0000595;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23993641	23994106	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000595;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000595;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000595:1;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23994107	23994210	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000595;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000595;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000595:2;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23994107	23994210	.	+	2	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000595;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000595;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000595:1;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23994211	23997233	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000595;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000595;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000595:2;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23997234	23997411	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000595;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000595;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000595:3;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23997234	23997411	.	+	0	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000595;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000595;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000595:2;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23997412	23999326	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000595;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000595;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000595:3;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	23999327	23999479	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000595;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000595;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000595:4;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	23999327	23999479	.	+	2	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000595;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000595;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000595:3;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	23999480	24001489	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000595;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000595;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000595:4;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24001490	24001604	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000595;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000595;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000595:5;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24001490	24001604	.	+	2	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000595;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000595;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000595:4;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24001605	24002559	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000595;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000595;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000595:5;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24002560	24002670	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000595;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000595;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000595:6;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24002560	24002670	.	+	1	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000595;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000595;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000595:5;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24002671	24003110	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000595;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000595;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000595:6;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24003111	24003221	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000595;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000595;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000595:7;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24003111	24003221	.	+	1	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000595;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000595;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000595:6;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24003222	24003655	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000595;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000595;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000595:7;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24003656	24003766	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000595;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000595;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000595:8;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24003656	24003766	.	+	1	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000595;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000595;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000595:7;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24003767	24004886	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000595;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000595;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000595:8;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24004887	24004975	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000595;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000595;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000595:9;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24004887	24004975	.	+	1	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000595;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000595;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000595:8;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24004976	24011448	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000595;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000595;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19239_ch_T0000595:9;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24011449	24011620	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000595;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000595;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19239_ch_T0000595:10;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24011449	24011459	.	+	2	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000595;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000595;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19239_ch_T0000595:9;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	24011457	24011459	.	+	0	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000595;gene_id=NA19239_ch_G0000220;Parent=NA19239_ch_T0000595;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:NA19239_ch_T0000595;Name=RBMY1F;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	24027023	24073595	.	+	.	source_gene_common_name=LOC101929148;source_gene=hg002_chrY_paternal_503;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;gene_id=NA19239_ch_G0000221;gene_biotype=lncRNA;gene_name=LOC101929148;gene_sources=liftoff;ID=NA19239_ch_G0000221;Name=LOC101929148
NA19239_chrY	CAT	transcript	24027023	24073595	1000	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=NA19239_ch_T0000596;gene_id=NA19239_ch_G0000221;Parent=NA19239_ch_G0000221;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=NA19239_ch_T0000596;Name=LOC101929148
NA19239_chrY	CAT	exon	24027023	24027223	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=NA19239_ch_T0000596;gene_id=NA19239_ch_G0000221;Parent=NA19239_ch_T0000596;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:NA19239_ch_T0000596:0;Name=LOC101929148;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24027224	24027557	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=NA19239_ch_T0000596;gene_id=NA19239_ch_G0000221;Parent=NA19239_ch_T0000596;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:NA19239_ch_T0000596:0;Name=LOC101929148;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24027558	24027867	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=NA19239_ch_T0000596;gene_id=NA19239_ch_G0000221;Parent=NA19239_ch_T0000596;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:NA19239_ch_T0000596:1;Name=LOC101929148;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24027868	24034412	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=NA19239_ch_T0000596;gene_id=NA19239_ch_G0000221;Parent=NA19239_ch_T0000596;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:NA19239_ch_T0000596:1;Name=LOC101929148;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24034413	24034553	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=NA19239_ch_T0000596;gene_id=NA19239_ch_G0000221;Parent=NA19239_ch_T0000596;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:NA19239_ch_T0000596:2;Name=LOC101929148;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24034554	24044520	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=NA19239_ch_T0000596;gene_id=NA19239_ch_G0000221;Parent=NA19239_ch_T0000596;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:NA19239_ch_T0000596:2;Name=LOC101929148;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24044521	24044743	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=NA19239_ch_T0000596;gene_id=NA19239_ch_G0000221;Parent=NA19239_ch_T0000596;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:NA19239_ch_T0000596:3;Name=LOC101929148;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24044744	24045051	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=NA19239_ch_T0000596;gene_id=NA19239_ch_G0000221;Parent=NA19239_ch_T0000596;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:NA19239_ch_T0000596:3;Name=LOC101929148;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24045052	24045137	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=NA19239_ch_T0000596;gene_id=NA19239_ch_G0000221;Parent=NA19239_ch_T0000596;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:NA19239_ch_T0000596:4;Name=LOC101929148;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24045138	24053106	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=NA19239_ch_T0000596;gene_id=NA19239_ch_G0000221;Parent=NA19239_ch_T0000596;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:NA19239_ch_T0000596:4;Name=LOC101929148;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24053107	24053225	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=NA19239_ch_T0000596;gene_id=NA19239_ch_G0000221;Parent=NA19239_ch_T0000596;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:NA19239_ch_T0000596:5;Name=LOC101929148;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24053226	24053655	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=NA19239_ch_T0000596;gene_id=NA19239_ch_G0000221;Parent=NA19239_ch_T0000596;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:NA19239_ch_T0000596:5;Name=LOC101929148;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24053656	24054009	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=NA19239_ch_T0000596;gene_id=NA19239_ch_G0000221;Parent=NA19239_ch_T0000596;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:NA19239_ch_T0000596:6;Name=LOC101929148;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24054010	24067645	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=NA19239_ch_T0000596;gene_id=NA19239_ch_G0000221;Parent=NA19239_ch_T0000596;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:NA19239_ch_T0000596:6;Name=LOC101929148;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24067646	24067735	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=NA19239_ch_T0000596;gene_id=NA19239_ch_G0000221;Parent=NA19239_ch_T0000596;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:NA19239_ch_T0000596:7;Name=LOC101929148;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24067736	24069201	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=NA19239_ch_T0000596;gene_id=NA19239_ch_G0000221;Parent=NA19239_ch_T0000596;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:NA19239_ch_T0000596:7;Name=LOC101929148;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24069202	24069537	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=NA19239_ch_T0000596;gene_id=NA19239_ch_G0000221;Parent=NA19239_ch_T0000596;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:NA19239_ch_T0000596:8;Name=LOC101929148;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24069538	24071337	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=NA19239_ch_T0000596;gene_id=NA19239_ch_G0000221;Parent=NA19239_ch_T0000596;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:NA19239_ch_T0000596:8;Name=LOC101929148;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24071338	24071423	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=NA19239_ch_T0000596;gene_id=NA19239_ch_G0000221;Parent=NA19239_ch_T0000596;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:NA19239_ch_T0000596:9;Name=LOC101929148;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24071424	24071543	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=NA19239_ch_T0000596;gene_id=NA19239_ch_G0000221;Parent=NA19239_ch_T0000596;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:NA19239_ch_T0000596:9;Name=LOC101929148;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24071544	24071740	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=NA19239_ch_T0000596;gene_id=NA19239_ch_G0000221;Parent=NA19239_ch_T0000596;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:NA19239_ch_T0000596:10;Name=LOC101929148;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24071741	24072284	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=NA19239_ch_T0000596;gene_id=NA19239_ch_G0000221;Parent=NA19239_ch_T0000596;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:NA19239_ch_T0000596:10;Name=LOC101929148;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24072285	24072402	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=NA19239_ch_T0000596;gene_id=NA19239_ch_G0000221;Parent=NA19239_ch_T0000596;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:NA19239_ch_T0000596:11;Name=LOC101929148;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24072403	24072917	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=NA19239_ch_T0000596;gene_id=NA19239_ch_G0000221;Parent=NA19239_ch_T0000596;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:NA19239_ch_T0000596:11;Name=LOC101929148;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24072918	24073595	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1,hg002_chrY_paternal_503.1;transcript_id=NA19239_ch_T0000596;gene_id=NA19239_ch_G0000221;Parent=NA19239_ch_T0000596;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:NA19239_ch_T0000596:12;Name=LOC101929148;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	24027676	24029542	.	-	.	source_gene_common_name=TTTY6;source_gene=hg002_chrY_paternal_504;alternative_source_transcripts=hg002_chrY_paternal_504.1,hg002_chrY_paternal_504.1;gene_id=NA19239_ch_G0000222;gene_biotype=lncRNA;gene_name=TTTY6;gene_sources=liftoff;ID=NA19239_ch_G0000222;Name=TTTY6
NA19239_chrY	CAT	transcript	24027676	24029542	1000	-	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=hg002_chrY_paternal_504.1,hg002_chrY_paternal_504.1;transcript_id=NA19239_ch_T0000597;gene_id=NA19239_ch_G0000222;Parent=NA19239_ch_G0000222;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=NA19239_ch_T0000597;Name=TTTY6
NA19239_chrY	CAT	exon	24027676	24027914	.	-	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=hg002_chrY_paternal_504.1,hg002_chrY_paternal_504.1;transcript_id=NA19239_ch_T0000597;gene_id=NA19239_ch_G0000222;Parent=NA19239_ch_T0000597;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=exon:NA19239_ch_T0000597:0;Name=TTTY6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24027915	24029071	.	-	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=hg002_chrY_paternal_504.1,hg002_chrY_paternal_504.1;transcript_id=NA19239_ch_T0000597;gene_id=NA19239_ch_G0000222;Parent=NA19239_ch_T0000597;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=intron:NA19239_ch_T0000597:0;Name=TTTY6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24029072	24029209	.	-	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=hg002_chrY_paternal_504.1,hg002_chrY_paternal_504.1;transcript_id=NA19239_ch_T0000597;gene_id=NA19239_ch_G0000222;Parent=NA19239_ch_T0000597;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=exon:NA19239_ch_T0000597:1;Name=TTTY6;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24029210	24029427	.	-	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=hg002_chrY_paternal_504.1,hg002_chrY_paternal_504.1;transcript_id=NA19239_ch_T0000597;gene_id=NA19239_ch_G0000222;Parent=NA19239_ch_T0000597;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=intron:NA19239_ch_T0000597:1;Name=TTTY6;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24029428	24029542	.	-	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=hg002_chrY_paternal_504.1,hg002_chrY_paternal_504.1;transcript_id=NA19239_ch_T0000597;gene_id=NA19239_ch_G0000222;Parent=NA19239_ch_T0000597;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=exon:NA19239_ch_T0000597:2;Name=TTTY6;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	24079281	24103523	.	+	.	source_gene_common_name=PRY;source_gene=hg002_chrY_paternal_486;alternative_source_transcripts=hg002_chrY_paternal_505.1;gene_id=NA19239_ch_G0000223;gene_biotype=protein_coding;gene_name=PRY;gene_sources=liftoff;ID=NA19239_ch_G0000223;Name=PRY
NA19239_chrY	CAT	transcript	24079281	24103523	100	+	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1;transcript_id=NA19239_ch_T0000598;gene_id=NA19239_ch_G0000223;Parent=NA19239_ch_G0000223;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=NA19239_ch_T0000598;Name=PRY
NA19239_chrY	CAT	exon	24079281	24079368	.	+	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1;transcript_id=NA19239_ch_T0000598;gene_id=NA19239_ch_G0000223;Parent=NA19239_ch_T0000598;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:NA19239_ch_T0000598:0;Name=PRY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24079369	24079469	.	+	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1;transcript_id=NA19239_ch_T0000598;gene_id=NA19239_ch_G0000223;Parent=NA19239_ch_T0000598;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=intron:NA19239_ch_T0000598:0;Name=PRY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24079470	24079556	.	+	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1;transcript_id=NA19239_ch_T0000598;gene_id=NA19239_ch_G0000223;Parent=NA19239_ch_T0000598;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:NA19239_ch_T0000598:1;Name=PRY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24079557	24090398	.	+	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1;transcript_id=NA19239_ch_T0000598;gene_id=NA19239_ch_G0000223;Parent=NA19239_ch_T0000598;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=intron:NA19239_ch_T0000598:1;Name=PRY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24090399	24090519	.	+	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1;transcript_id=NA19239_ch_T0000598;gene_id=NA19239_ch_G0000223;Parent=NA19239_ch_T0000598;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:NA19239_ch_T0000598:2;Name=PRY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24090451	24090519	.	+	0	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1;transcript_id=NA19239_ch_T0000598;gene_id=NA19239_ch_G0000223;Parent=NA19239_ch_T0000598;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=CDS:NA19239_ch_T0000598:0;Name=PRY;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	24090451	24090453	.	+	0	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1;transcript_id=NA19239_ch_T0000598;gene_id=NA19239_ch_G0000223;Parent=NA19239_ch_T0000598;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=start_codon:NA19239_ch_T0000598;Name=PRY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24090520	24093094	.	+	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1;transcript_id=NA19239_ch_T0000598;gene_id=NA19239_ch_G0000223;Parent=NA19239_ch_T0000598;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=intron:NA19239_ch_T0000598:2;Name=PRY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24093095	24093210	.	+	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1;transcript_id=NA19239_ch_T0000598;gene_id=NA19239_ch_G0000223;Parent=NA19239_ch_T0000598;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:NA19239_ch_T0000598:3;Name=PRY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24093095	24093210	.	+	0	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1;transcript_id=NA19239_ch_T0000598;gene_id=NA19239_ch_G0000223;Parent=NA19239_ch_T0000598;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=CDS:NA19239_ch_T0000598:1;Name=PRY;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24093211	24102697	.	+	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1;transcript_id=NA19239_ch_T0000598;gene_id=NA19239_ch_G0000223;Parent=NA19239_ch_T0000598;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=intron:NA19239_ch_T0000598:3;Name=PRY;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24102698	24103523	.	+	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1;transcript_id=NA19239_ch_T0000598;gene_id=NA19239_ch_G0000223;Parent=NA19239_ch_T0000598;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:NA19239_ch_T0000598:4;Name=PRY;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24102698	24102956	.	+	1	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1;transcript_id=NA19239_ch_T0000598;gene_id=NA19239_ch_G0000223;Parent=NA19239_ch_T0000598;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=CDS:NA19239_ch_T0000598:2;Name=PRY;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	24102954	24102956	.	+	0	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1;transcript_id=NA19239_ch_T0000598;gene_id=NA19239_ch_G0000223;Parent=NA19239_ch_T0000598;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=stop_codon:NA19239_ch_T0000598;Name=PRY;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	24144932	24146929	.	-	.	source_gene_common_name=LOC107987357;source_gene=hg002_chrY_paternal_510;alternative_source_transcripts=hg002_chrY_paternal_510.1,hg002_chrY_paternal_510.1;gene_id=NA19239_ch_G0000224;gene_biotype=lncRNA;gene_name=LOC107987357;gene_sources=liftoff;ID=NA19239_ch_G0000224;Name=LOC107987357
NA19239_chrY	CAT	transcript	24144932	24146929	1000	-	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;alternative_source_transcripts=hg002_chrY_paternal_510.1,hg002_chrY_paternal_510.1;transcript_id=NA19239_ch_T0000599;gene_id=NA19239_ch_G0000224;Parent=NA19239_ch_G0000224;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=NA19239_ch_T0000599;Name=LOC107987357
NA19239_chrY	CAT	exon	24144932	24145133	.	-	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;alternative_source_transcripts=hg002_chrY_paternal_510.1,hg002_chrY_paternal_510.1;transcript_id=NA19239_ch_T0000599;gene_id=NA19239_ch_G0000224;Parent=NA19239_ch_T0000599;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=exon:NA19239_ch_T0000599:0;Name=LOC107987357;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24145134	24146668	.	-	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;alternative_source_transcripts=hg002_chrY_paternal_510.1,hg002_chrY_paternal_510.1;transcript_id=NA19239_ch_T0000599;gene_id=NA19239_ch_G0000224;Parent=NA19239_ch_T0000599;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=intron:NA19239_ch_T0000599:0;Name=LOC107987357;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24146669	24146729	.	-	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;alternative_source_transcripts=hg002_chrY_paternal_510.1,hg002_chrY_paternal_510.1;transcript_id=NA19239_ch_T0000599;gene_id=NA19239_ch_G0000224;Parent=NA19239_ch_T0000599;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=exon:NA19239_ch_T0000599:1;Name=LOC107987357;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24146730	24146846	.	-	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;alternative_source_transcripts=hg002_chrY_paternal_510.1,hg002_chrY_paternal_510.1;transcript_id=NA19239_ch_T0000599;gene_id=NA19239_ch_G0000224;Parent=NA19239_ch_T0000599;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=intron:NA19239_ch_T0000599:1;Name=LOC107987357;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24146847	24146929	.	-	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;alternative_source_transcripts=hg002_chrY_paternal_510.1,hg002_chrY_paternal_510.1;transcript_id=NA19239_ch_T0000599;gene_id=NA19239_ch_G0000224;Parent=NA19239_ch_T0000599;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=exon:NA19239_ch_T0000599:2;Name=LOC107987357;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	24375120	24386358	.	+	.	source_gene_common_name=LOC107987348;source_gene=hg002_chrY_paternal_515;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;gene_id=NA19239_ch_G0000225;gene_biotype=lncRNA;gene_name=LOC107987348;gene_sources=liftoff;ID=NA19239_ch_G0000225;Name=LOC107987348
NA19239_chrY	CAT	transcript	24375120	24386358	1000	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=NA19239_ch_T0000600;gene_id=NA19239_ch_G0000225;Parent=NA19239_ch_G0000225;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=NA19239_ch_T0000600;Name=LOC107987348
NA19239_chrY	CAT	exon	24375120	24375575	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=NA19239_ch_T0000600;gene_id=NA19239_ch_G0000225;Parent=NA19239_ch_T0000600;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:NA19239_ch_T0000600:0;Name=LOC107987348;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24375576	24381545	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=NA19239_ch_T0000600;gene_id=NA19239_ch_G0000225;Parent=NA19239_ch_T0000600;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=intron:NA19239_ch_T0000600:0;Name=LOC107987348;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24381546	24383710	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=NA19239_ch_T0000600;gene_id=NA19239_ch_G0000225;Parent=NA19239_ch_T0000600;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:NA19239_ch_T0000600:1;Name=LOC107987348;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24383711	24384351	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=NA19239_ch_T0000600;gene_id=NA19239_ch_G0000225;Parent=NA19239_ch_T0000600;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=intron:NA19239_ch_T0000600:1;Name=LOC107987348;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24384352	24386358	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=NA19239_ch_T0000600;gene_id=NA19239_ch_G0000225;Parent=NA19239_ch_T0000600;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:NA19239_ch_T0000600:2;Name=LOC107987348;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	24375120	24386358	1000	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=NA19239_ch_T0000601;gene_id=NA19239_ch_G0000225;Parent=NA19239_ch_G0000225;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=NA19239_ch_T0000601;Name=LOC107987348
NA19239_chrY	CAT	exon	24375120	24375575	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=NA19239_ch_T0000601;gene_id=NA19239_ch_G0000225;Parent=NA19239_ch_T0000601;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:NA19239_ch_T0000601:0;Name=LOC107987348;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24375576	24381077	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=NA19239_ch_T0000601;gene_id=NA19239_ch_G0000225;Parent=NA19239_ch_T0000601;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=intron:NA19239_ch_T0000601:0;Name=LOC107987348;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24381078	24383710	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=NA19239_ch_T0000601;gene_id=NA19239_ch_G0000225;Parent=NA19239_ch_T0000601;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:NA19239_ch_T0000601:1;Name=LOC107987348;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24383711	24384351	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=NA19239_ch_T0000601;gene_id=NA19239_ch_G0000225;Parent=NA19239_ch_T0000601;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=intron:NA19239_ch_T0000601:1;Name=LOC107987348;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24384352	24386358	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=NA19239_ch_T0000601;gene_id=NA19239_ch_G0000225;Parent=NA19239_ch_T0000601;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:NA19239_ch_T0000601:2;Name=LOC107987348;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	24440491	24441622	.	+	.	source_gene_common_name=TTTY17A;source_gene=hg002_chrY_paternal_516;alternative_source_transcripts=hg002_chrY_paternal_516.1;gene_id=NA19239_ch_G0000226;gene_biotype=lncRNA;gene_name=TTTY17A;gene_sources=liftoff;ID=NA19239_ch_G0000226;Name=TTTY17A
NA19239_chrY	CAT	transcript	24440491	24441622	1000	+	.	source_transcript=hg002_chrY_paternal_516.1;source_transcript_name=hg002_chrY_paternal_516.1;source_gene=hg002_chrY_paternal_516;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_516;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_516.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_516.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=hg002_chrY_paternal_516.1;transcript_id=NA19239_ch_T0000602;gene_id=NA19239_ch_G0000226;Parent=NA19239_ch_G0000226;transcript_name=hg002_chrY_paternal_516.1;gene_name=TTTY17A;ID=NA19239_ch_T0000602;Name=TTTY17A
NA19239_chrY	CAT	exon	24440491	24440550	.	+	.	source_transcript=hg002_chrY_paternal_516.1;source_transcript_name=hg002_chrY_paternal_516.1;source_gene=hg002_chrY_paternal_516;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_516;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_516.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_516.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=hg002_chrY_paternal_516.1;transcript_id=NA19239_ch_T0000602;gene_id=NA19239_ch_G0000226;Parent=NA19239_ch_T0000602;transcript_name=hg002_chrY_paternal_516.1;gene_name=TTTY17A;ID=exon:NA19239_ch_T0000602:0;Name=TTTY17A;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24440551	24441516	.	+	.	source_transcript=hg002_chrY_paternal_516.1;source_transcript_name=hg002_chrY_paternal_516.1;source_gene=hg002_chrY_paternal_516;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_516;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_516.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_516.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=hg002_chrY_paternal_516.1;transcript_id=NA19239_ch_T0000602;gene_id=NA19239_ch_G0000226;Parent=NA19239_ch_T0000602;transcript_name=hg002_chrY_paternal_516.1;gene_name=TTTY17A;ID=intron:NA19239_ch_T0000602:0;Name=TTTY17A;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24441517	24441622	.	+	.	source_transcript=hg002_chrY_paternal_516.1;source_transcript_name=hg002_chrY_paternal_516.1;source_gene=hg002_chrY_paternal_516;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_516;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_516.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_516.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=hg002_chrY_paternal_516.1;transcript_id=NA19239_ch_T0000602;gene_id=NA19239_ch_G0000226;Parent=NA19239_ch_T0000602;transcript_name=hg002_chrY_paternal_516.1;gene_name=TTTY17A;ID=exon:NA19239_ch_T0000602:1;Name=TTTY17A;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	24525367	24562192	.	+	.	source_gene_common_name=TTTY4C;source_gene=hg002_chrY_paternal_519;alternative_source_transcripts=hg002_chrY_paternal_519.1;gene_id=NA19239_ch_G0000227;gene_biotype=lncRNA;gene_name=TTTY4C;gene_sources=liftoff;ID=NA19239_ch_G0000227;Name=TTTY4C
NA19239_chrY	CAT	transcript	24525367	24562192	1000	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=NA19239_ch_T0000603;gene_id=NA19239_ch_G0000227;Parent=NA19239_ch_G0000227;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=NA19239_ch_T0000603;Name=TTTY4C
NA19239_chrY	CAT	exon	24525367	24525527	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=NA19239_ch_T0000603;gene_id=NA19239_ch_G0000227;Parent=NA19239_ch_T0000603;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=exon:NA19239_ch_T0000603:0;Name=TTTY4C;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24525528	24552535	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=NA19239_ch_T0000603;gene_id=NA19239_ch_G0000227;Parent=NA19239_ch_T0000603;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=intron:NA19239_ch_T0000603:0;Name=TTTY4C;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24552536	24552611	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=NA19239_ch_T0000603;gene_id=NA19239_ch_G0000227;Parent=NA19239_ch_T0000603;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=exon:NA19239_ch_T0000603:1;Name=TTTY4C;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24552612	24554415	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=NA19239_ch_T0000603;gene_id=NA19239_ch_G0000227;Parent=NA19239_ch_T0000603;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=intron:NA19239_ch_T0000603:1;Name=TTTY4C;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24554416	24554523	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=NA19239_ch_T0000603;gene_id=NA19239_ch_G0000227;Parent=NA19239_ch_T0000603;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=exon:NA19239_ch_T0000603:2;Name=TTTY4C;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24554524	24561191	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=NA19239_ch_T0000603;gene_id=NA19239_ch_G0000227;Parent=NA19239_ch_T0000603;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=intron:NA19239_ch_T0000603:2;Name=TTTY4C;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24561192	24562192	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=NA19239_ch_T0000603;gene_id=NA19239_ch_G0000227;Parent=NA19239_ch_T0000603;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=exon:NA19239_ch_T0000603:3;Name=TTTY4C;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	24573171	24594374	.	+	.	source_gene_common_name=BPY2B;source_gene=hg002_chrY_paternal_533;alternative_source_transcripts=hg002_chrY_paternal_520.1;gene_id=NA19239_ch_G0000228;gene_biotype=protein_coding;gene_name=BPY2B;gene_sources=liftoff;ID=NA19239_ch_G0000228;Name=BPY2B
NA19239_chrY	CAT	transcript	24573171	24594374	10000	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000604;gene_id=NA19239_ch_G0000228;Parent=NA19239_ch_G0000228;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=NA19239_ch_T0000604;Name=BPY2B
NA19239_chrY	CAT	exon	24573171	24573201	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000604;gene_id=NA19239_ch_G0000228;Parent=NA19239_ch_T0000604;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:NA19239_ch_T0000604:0;Name=BPY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24573202	24573476	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000604;gene_id=NA19239_ch_G0000228;Parent=NA19239_ch_T0000604;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:NA19239_ch_T0000604:0;Name=BPY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24573477	24573599	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000604;gene_id=NA19239_ch_G0000228;Parent=NA19239_ch_T0000604;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:NA19239_ch_T0000604:1;Name=BPY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24573600	24576664	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000604;gene_id=NA19239_ch_G0000228;Parent=NA19239_ch_T0000604;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:NA19239_ch_T0000604:1;Name=BPY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24576665	24576801	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000604;gene_id=NA19239_ch_G0000228;Parent=NA19239_ch_T0000604;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:NA19239_ch_T0000604:2;Name=BPY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24576802	24581210	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000604;gene_id=NA19239_ch_G0000228;Parent=NA19239_ch_T0000604;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:NA19239_ch_T0000604:2;Name=BPY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24581211	24581329	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000604;gene_id=NA19239_ch_G0000228;Parent=NA19239_ch_T0000604;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:NA19239_ch_T0000604:3;Name=BPY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24581252	24581329	.	+	0	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000604;gene_id=NA19239_ch_G0000228;Parent=NA19239_ch_T0000604;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=CDS:NA19239_ch_T0000604:0;Name=BPY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	24581252	24581254	.	+	0	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000604;gene_id=NA19239_ch_G0000228;Parent=NA19239_ch_T0000604;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=start_codon:NA19239_ch_T0000604;Name=BPY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24581330	24583388	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000604;gene_id=NA19239_ch_G0000228;Parent=NA19239_ch_T0000604;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:NA19239_ch_T0000604:3;Name=BPY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24583389	24583506	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000604;gene_id=NA19239_ch_G0000228;Parent=NA19239_ch_T0000604;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:NA19239_ch_T0000604:4;Name=BPY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24583389	24583506	.	+	0	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000604;gene_id=NA19239_ch_G0000228;Parent=NA19239_ch_T0000604;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=CDS:NA19239_ch_T0000604:1;Name=BPY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24583507	24586360	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000604;gene_id=NA19239_ch_G0000228;Parent=NA19239_ch_T0000604;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:NA19239_ch_T0000604:4;Name=BPY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24586361	24586466	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000604;gene_id=NA19239_ch_G0000228;Parent=NA19239_ch_T0000604;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:NA19239_ch_T0000604:5;Name=BPY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24586361	24586466	.	+	2	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000604;gene_id=NA19239_ch_G0000228;Parent=NA19239_ch_T0000604;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=CDS:NA19239_ch_T0000604:2;Name=BPY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24586467	24587158	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000604;gene_id=NA19239_ch_G0000228;Parent=NA19239_ch_T0000604;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:NA19239_ch_T0000604:5;Name=BPY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24587159	24587283	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000604;gene_id=NA19239_ch_G0000228;Parent=NA19239_ch_T0000604;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:NA19239_ch_T0000604:6;Name=BPY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24587159	24587177	.	+	1	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000604;gene_id=NA19239_ch_G0000228;Parent=NA19239_ch_T0000604;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=CDS:NA19239_ch_T0000604:3;Name=BPY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	24587175	24587177	.	+	0	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000604;gene_id=NA19239_ch_G0000228;Parent=NA19239_ch_T0000604;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=stop_codon:NA19239_ch_T0000604;Name=BPY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24587284	24593833	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000604;gene_id=NA19239_ch_G0000228;Parent=NA19239_ch_T0000604;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:NA19239_ch_T0000604:6;Name=BPY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24593834	24593958	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000604;gene_id=NA19239_ch_G0000228;Parent=NA19239_ch_T0000604;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:NA19239_ch_T0000604:7;Name=BPY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24593959	24594052	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000604;gene_id=NA19239_ch_G0000228;Parent=NA19239_ch_T0000604;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:NA19239_ch_T0000604:7;Name=BPY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24594053	24594374	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000604;gene_id=NA19239_ch_G0000228;Parent=NA19239_ch_T0000604;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:NA19239_ch_T0000604:8;Name=BPY2B;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	24695300	24698637	.	-	.	source_gene_common_name=LOC105377242;source_gene=hg002_chrY_paternal_528;gene_id=NA19239_ch_G0000229;gene_biotype=lncRNA;gene_name=LOC105377242;gene_sources=liftoff;ID=NA19239_ch_G0000229;Name=LOC105377242
NA19239_chrY	CAT	transcript	24695300	24698637	1000	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=NA19239_ch_T0000605;gene_id=NA19239_ch_G0000229;Parent=NA19239_ch_G0000229;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=NA19239_ch_T0000605;Name=LOC105377242
NA19239_chrY	CAT	exon	24695300	24695400	.	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=NA19239_ch_T0000605;gene_id=NA19239_ch_G0000229;Parent=NA19239_ch_T0000605;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:NA19239_ch_T0000605:0;Name=LOC105377242;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24695401	24697731	.	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=NA19239_ch_T0000605;gene_id=NA19239_ch_G0000229;Parent=NA19239_ch_T0000605;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=intron:NA19239_ch_T0000605:0;Name=LOC105377242;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24697732	24697796	.	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=NA19239_ch_T0000605;gene_id=NA19239_ch_G0000229;Parent=NA19239_ch_T0000605;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:NA19239_ch_T0000605:1;Name=LOC105377242;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24697797	24698458	.	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=NA19239_ch_T0000605;gene_id=NA19239_ch_G0000229;Parent=NA19239_ch_T0000605;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=intron:NA19239_ch_T0000605:1;Name=LOC105377242;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24698459	24698637	.	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=NA19239_ch_T0000605;gene_id=NA19239_ch_G0000229;Parent=NA19239_ch_T0000605;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:NA19239_ch_T0000605:2;Name=LOC105377242;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	24695300	24698637	1000	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=NA19239_ch_T0000606;gene_id=NA19239_ch_G0000229;Parent=NA19239_ch_G0000229;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=NA19239_ch_T0000606;Name=LOC105377242
NA19239_chrY	CAT	exon	24695300	24695400	.	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=NA19239_ch_T0000606;gene_id=NA19239_ch_G0000229;Parent=NA19239_ch_T0000606;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:NA19239_ch_T0000606:0;Name=LOC105377242;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24695401	24697758	.	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=NA19239_ch_T0000606;gene_id=NA19239_ch_G0000229;Parent=NA19239_ch_T0000606;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=intron:NA19239_ch_T0000606:0;Name=LOC105377242;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24697759	24697796	.	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=NA19239_ch_T0000606;gene_id=NA19239_ch_G0000229;Parent=NA19239_ch_T0000606;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:NA19239_ch_T0000606:1;Name=LOC105377242;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24697797	24698458	.	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=NA19239_ch_T0000606;gene_id=NA19239_ch_G0000229;Parent=NA19239_ch_T0000606;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=intron:NA19239_ch_T0000606:1;Name=LOC105377242;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24698459	24698637	.	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=NA19239_ch_T0000606;gene_id=NA19239_ch_G0000229;Parent=NA19239_ch_T0000606;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:NA19239_ch_T0000606:2;Name=LOC105377242;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	24718239	24787892	.	-	.	source_gene_common_name=DAZ3;source_gene=hg002_chrY_paternal_526;alternative_source_transcripts=hg002_chrY_paternal_526.1;gene_id=NA19239_ch_G0000230;gene_biotype=protein_coding;gene_name=DAZ3;gene_sources=augTM,transMap;ID=NA19239_ch_G0000230;Name=DAZ3
NA19239_chrY	CAT	transcript	24718239	24787892	9950	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_G0000230;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=NA19239_ch_T0000607;Name=DAZ3
NA19239_chrY	CAT	exon	24718239	24720095	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19239_ch_T0000607:0;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24720096	24724058	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19239_ch_T0000607:0;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24724059	24724157	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19239_ch_T0000607:1;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24724094	24724157	.	-	1	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19239_ch_T0000607:0;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	24724094	24724096	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=stop_codon:NA19239_ch_T0000607;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24724158	24728730	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19239_ch_T0000607:1;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24728731	24728765	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19239_ch_T0000607:2;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24728731	24728765	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19239_ch_T0000607:1;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24728766	24729509	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19239_ch_T0000607:2;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24729510	24729581	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19239_ch_T0000607:3;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24729510	24729581	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19239_ch_T0000607:2;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24729582	24741680	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19239_ch_T0000607:3;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24741681	24741752	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19239_ch_T0000607:4;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24741681	24741752	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19239_ch_T0000607:3;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24741753	24744057	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19239_ch_T0000607:4;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24744058	24744129	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19239_ch_T0000607:5;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24744058	24744129	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19239_ch_T0000607:4;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24744130	24746453	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19239_ch_T0000607:5;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24746454	24746525	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19239_ch_T0000607:6;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24746454	24746525	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19239_ch_T0000607:5;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24746526	24748836	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19239_ch_T0000607:6;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24748837	24748908	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19239_ch_T0000607:7;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24748837	24748908	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19239_ch_T0000607:6;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24748909	24751232	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19239_ch_T0000607:7;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24751233	24751304	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19239_ch_T0000607:8;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24751233	24751304	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19239_ch_T0000607:7;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24751305	24753623	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19239_ch_T0000607:8;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24753624	24753695	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19239_ch_T0000607:9;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24753624	24753695	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19239_ch_T0000607:8;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24753696	24756068	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19239_ch_T0000607:9;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24756069	24756140	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19239_ch_T0000607:10;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24756069	24756140	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19239_ch_T0000607:9;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24756141	24768385	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19239_ch_T0000607:10;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24768386	24768525	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19239_ch_T0000607:11;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24768386	24768525	.	-	2	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19239_ch_T0000607:10;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24768526	24768614	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19239_ch_T0000607:11;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24768615	24768678	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19239_ch_T0000607:12;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24768615	24768678	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19239_ch_T0000607:11;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24768679	24769114	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19239_ch_T0000607:12;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24769115	24769166	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19239_ch_T0000607:13;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24769115	24769166	.	-	1	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19239_ch_T0000607:12;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24769167	24769726	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19239_ch_T0000607:13;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24769727	24769818	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19239_ch_T0000607:14;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24769727	24769818	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19239_ch_T0000607:13;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24769819	24770092	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19239_ch_T0000607:14;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24770093	24770239	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19239_ch_T0000607:15;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24770093	24770239	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19239_ch_T0000607:14;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24770240	24787681	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19239_ch_T0000607:15;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24787682	24787892	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19239_ch_T0000607:16;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24787682	24787684	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19239_ch_T0000607:15;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	24787682	24787684	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000607;gene_id=NA19239_ch_G0000230;Parent=NA19239_ch_T0000607;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=start_codon:NA19239_ch_T0000607;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	24808321	24873088	.	+	.	source_gene_common_name=DAZ4;source_gene=hg002_chrY_paternal_527;gene_id=NA19239_ch_G0000231;gene_biotype=protein_coding;gene_name=DAZ4;gene_sources=augTM,transMap;ID=NA19239_ch_G0000231;Name=DAZ4
NA19239_chrY	CAT	transcript	24808321	24873088	9950	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_G0000231;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=NA19239_ch_T0000608;Name=DAZ4
NA19239_chrY	CAT	exon	24808321	24808630	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000608:0;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24808628	24808630	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000608:0;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	24808628	24808630	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=start_codon:NA19239_ch_T0000608;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24808631	24815227	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000608:0;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24815228	24815374	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000608:1;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24815228	24815374	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000608:1;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24815375	24815648	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000608:1;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24815649	24815740	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000608:2;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24815649	24815740	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000608:2;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24815741	24816300	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000608:2;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24816301	24816352	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000608:3;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24816301	24816352	.	+	1	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000608:3;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24816353	24816788	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000608:3;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24816789	24816852	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000608:4;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24816789	24816852	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000608:4;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24816853	24816941	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000608:4;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24816942	24817081	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000608:5;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24816942	24817081	.	+	2	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000608:5;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24817082	24818481	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000608:5;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24818482	24818553	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000608:6;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24818482	24818553	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000608:6;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24818554	24820925	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000608:6;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24820926	24820997	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000608:7;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24820926	24820997	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000608:7;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24820998	24823316	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000608:7;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24823317	24823388	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000608:8;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24823317	24823388	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000608:8;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24823389	24849823	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000608:8;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24849824	24849895	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000608:9;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24849824	24849895	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000608:9;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24849896	24861745	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000608:9;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24861746	24861817	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000608:10;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24861746	24861817	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000608:10;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24861818	24862561	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000608:10;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24862562	24862596	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000608:11;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24862562	24862596	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000608:11;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24862597	24867169	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000608:11;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24867170	24867268	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000608:12;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24867170	24867233	.	+	1	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000608:12;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	24867231	24867233	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=stop_codon:NA19239_ch_T0000608;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24867269	24871231	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000608:12;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24871232	24873088	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000608;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000608;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000608:13;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	24808321	24873088	9940	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000609;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_G0000231;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=NA19239_ch_T0000609;Name=DAZ4
NA19239_chrY	CAT	exon	24808321	24808630	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000609;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000609;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000609:0;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24808628	24808630	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000609;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000609;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000609:0;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	24808628	24808630	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000609;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000609;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=start_codon:NA19239_ch_T0000609;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24808631	24818481	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000609;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000609;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000609:0;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24818482	24818553	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000609;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000609;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000609:1;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24818482	24818553	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000609;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000609;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000609:1;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24818554	24820925	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000609;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000609;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000609:1;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24820926	24820997	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000609;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000609;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000609:2;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24820926	24820997	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000609;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000609;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000609:2;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24820998	24823316	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000609;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000609;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000609:2;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24823317	24823388	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000609;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000609;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000609:3;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24823317	24823388	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000609;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000609;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000609:3;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24823389	24861745	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000609;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000609;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000609:3;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24861746	24861817	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000609;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000609;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000609:4;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24861746	24861817	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000609;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000609;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000609:4;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24861818	24862561	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000609;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000609;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000609:4;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24862562	24862596	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000609;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000609;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000609:5;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24862562	24862596	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000609;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000609;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000609:5;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24862597	24867169	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000609;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000609;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000609:5;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24867170	24867268	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000609;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000609;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000609:6;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24867170	24867233	.	+	1	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000609;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000609;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000609:6;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	24867231	24867233	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000609;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000609;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=stop_codon:NA19239_ch_T0000609;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24867269	24871231	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000609;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000609;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000609:6;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24871232	24873088	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000609;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000609;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000609:7;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	24808420	24873088	9950	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_G0000231;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=NA19239_ch_T0000610;Name=DAZ4
NA19239_chrY	CAT	exon	24808420	24808630	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000610:0;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24808628	24808630	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000610:0;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	24808628	24808630	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=start_codon:NA19239_ch_T0000610;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24808631	24815227	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000610:0;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24815228	24815374	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000610:1;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24815228	24815374	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000610:1;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24815375	24815648	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000610:1;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24815649	24815740	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000610:2;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24815649	24815740	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000610:2;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24815741	24816300	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000610:2;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24816301	24816352	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000610:3;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24816301	24816352	.	+	1	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000610:3;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24816353	24816788	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000610:3;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24816789	24816852	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000610:4;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24816789	24816852	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000610:4;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24816853	24816941	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000610:4;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24816942	24817081	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000610:5;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24816942	24817081	.	+	2	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000610:5;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24817082	24818481	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000610:5;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24818482	24818553	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000610:6;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24818482	24818553	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000610:6;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24818554	24820925	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000610:6;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24820926	24820997	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000610:7;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24820926	24820997	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000610:7;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24820998	24823316	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000610:7;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24823317	24823388	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000610:8;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24823317	24823388	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000610:8;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24823389	24849823	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000610:8;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24849824	24849895	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000610:9;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24849824	24849895	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000610:9;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24849896	24852207	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000610:9;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24852208	24852279	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000610:10;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24852208	24852279	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000610:10;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24852280	24854592	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000610:10;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24854593	24854664	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000610:11;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24854593	24854664	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000610:11;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24854665	24856976	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000610:11;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24856977	24857048	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000610:12;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24856977	24857048	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000610:12;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24857049	24859360	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000610:12;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24859361	24859432	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000610:13;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24859361	24859432	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000610:13;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24859433	24861745	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000610:13;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24861746	24861817	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000610:14;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24861746	24861817	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000610:14;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24861818	24862561	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000610:14;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24862562	24862596	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000610:15;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24862562	24862596	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000610:15;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24862597	24867169	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000610:15;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24867170	24867268	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000610:16;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	24867170	24867233	.	+	1	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000610:16;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	24867231	24867233	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=stop_codon:NA19239_ch_T0000610;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24867269	24871231	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000610:16;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24871232	24873088	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000610;gene_id=NA19239_ch_G0000231;Parent=NA19239_ch_T0000610;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000610:17;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	24892701	24896038	.	+	.	source_gene_common_name=LOC105377239;source_gene=hg002_chrY_paternal_602;alternative_source_transcripts=hg002_chrY_paternal_528.1;gene_id=NA19239_ch_G0000232;gene_biotype=lncRNA;gene_name=LOC105377239;gene_sources=liftoff;ID=NA19239_ch_G0000232;Name=LOC105377239
NA19239_chrY	CAT	transcript	24892701	24896038	1000	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.1;transcript_id=NA19239_ch_T0000611;gene_id=NA19239_ch_G0000232;Parent=NA19239_ch_G0000232;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=NA19239_ch_T0000611;Name=LOC105377239
NA19239_chrY	CAT	exon	24892701	24892879	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.1;transcript_id=NA19239_ch_T0000611;gene_id=NA19239_ch_G0000232;Parent=NA19239_ch_T0000611;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:NA19239_ch_T0000611:0;Name=LOC105377239;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24892880	24893541	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.1;transcript_id=NA19239_ch_T0000611;gene_id=NA19239_ch_G0000232;Parent=NA19239_ch_T0000611;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=intron:NA19239_ch_T0000611:0;Name=LOC105377239;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24893542	24893606	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.1;transcript_id=NA19239_ch_T0000611;gene_id=NA19239_ch_G0000232;Parent=NA19239_ch_T0000611;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:NA19239_ch_T0000611:1;Name=LOC105377239;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24893607	24895937	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.1;transcript_id=NA19239_ch_T0000611;gene_id=NA19239_ch_G0000232;Parent=NA19239_ch_T0000611;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=intron:NA19239_ch_T0000611:1;Name=LOC105377239;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24895938	24896038	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.1;transcript_id=NA19239_ch_T0000611;gene_id=NA19239_ch_G0000232;Parent=NA19239_ch_T0000611;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:NA19239_ch_T0000611:2;Name=LOC105377239;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	24892701	24896038	1000	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.2;transcript_id=NA19239_ch_T0000612;gene_id=NA19239_ch_G0000232;Parent=NA19239_ch_G0000232;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=NA19239_ch_T0000612;Name=LOC105377239
NA19239_chrY	CAT	exon	24892701	24892879	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.2;transcript_id=NA19239_ch_T0000612;gene_id=NA19239_ch_G0000232;Parent=NA19239_ch_T0000612;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:NA19239_ch_T0000612:0;Name=LOC105377239;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24892880	24893541	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.2;transcript_id=NA19239_ch_T0000612;gene_id=NA19239_ch_G0000232;Parent=NA19239_ch_T0000612;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=intron:NA19239_ch_T0000612:0;Name=LOC105377239;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24893542	24893579	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.2;transcript_id=NA19239_ch_T0000612;gene_id=NA19239_ch_G0000232;Parent=NA19239_ch_T0000612;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:NA19239_ch_T0000612:1;Name=LOC105377239;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	24893580	24895937	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.2;transcript_id=NA19239_ch_T0000612;gene_id=NA19239_ch_G0000232;Parent=NA19239_ch_T0000612;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=intron:NA19239_ch_T0000612:1;Name=LOC105377239;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	24895938	24896038	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.2;transcript_id=NA19239_ch_T0000612;gene_id=NA19239_ch_G0000232;Parent=NA19239_ch_T0000612;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:NA19239_ch_T0000612:2;Name=LOC105377239;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	25004798	25004935	.	-	.	source_gene_common_name=LOC124900506;source_gene=hg002_chrY_paternal_597;alternative_source_transcripts=hg002_chrY_paternal_597.1;gene_id=NA19239_ch_G0000233;gene_biotype=snoRNA;gene_name=LOC124900506;gene_sources=liftoff;ID=NA19239_ch_G0000233;Name=LOC124900506
NA19239_chrY	CAT	transcript	25004798	25004935	1000	-	.	source_transcript=hg002_chrY_paternal_597.1;source_transcript_name=hg002_chrY_paternal_597.1;source_gene=hg002_chrY_paternal_597;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_597;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_597.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_597.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900506;alternative_source_transcripts=hg002_chrY_paternal_597.1;transcript_id=NA19239_ch_T0000613;gene_id=NA19239_ch_G0000233;Parent=NA19239_ch_G0000233;transcript_name=hg002_chrY_paternal_597.1;gene_name=LOC124900506;ID=NA19239_ch_T0000613;Name=LOC124900506
NA19239_chrY	CAT	exon	25004798	25004935	.	-	.	source_transcript=hg002_chrY_paternal_597.1;source_transcript_name=hg002_chrY_paternal_597.1;source_gene=hg002_chrY_paternal_597;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_597;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_597.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_597.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900506;alternative_source_transcripts=hg002_chrY_paternal_597.1;transcript_id=NA19239_ch_T0000613;gene_id=NA19239_ch_G0000233;Parent=NA19239_ch_T0000613;transcript_name=hg002_chrY_paternal_597.1;gene_name=LOC124900506;ID=exon:NA19239_ch_T0000613:0;Name=LOC124900506;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	25016946	25058445	.	+	.	source_gene_common_name=REREP1Y;source_gene=hg002_chrY_paternal_596;alternative_source_transcripts=hg002_chrY_paternal_596.1;gene_id=NA19239_ch_G0000234;gene_biotype=transcribed_pseudogene;gene_name=REREP1Y;gene_sources=liftoff;ID=NA19239_ch_G0000234;Name=REREP1Y
NA19239_chrY	CAT	transcript	25016946	25058445	1000	+	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=NA19239_ch_T0000614;gene_id=NA19239_ch_G0000234;Parent=NA19239_ch_G0000234;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=NA19239_ch_T0000614;Name=REREP1Y
NA19239_chrY	CAT	exon	25016946	25017348	.	+	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=NA19239_ch_T0000614;gene_id=NA19239_ch_G0000234;Parent=NA19239_ch_T0000614;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=exon:NA19239_ch_T0000614:0;Name=REREP1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	25017349	25044165	.	+	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=NA19239_ch_T0000614;gene_id=NA19239_ch_G0000234;Parent=NA19239_ch_T0000614;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=intron:NA19239_ch_T0000614:0;Name=REREP1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	25044166	25044238	.	+	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=NA19239_ch_T0000614;gene_id=NA19239_ch_G0000234;Parent=NA19239_ch_T0000614;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=exon:NA19239_ch_T0000614:1;Name=REREP1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	25044239	25053854	.	+	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=NA19239_ch_T0000614;gene_id=NA19239_ch_G0000234;Parent=NA19239_ch_T0000614;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=intron:NA19239_ch_T0000614:1;Name=REREP1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	25053855	25058445	.	+	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=NA19239_ch_T0000614;gene_id=NA19239_ch_G0000234;Parent=NA19239_ch_T0000614;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=exon:NA19239_ch_T0000614:2;Name=REREP1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	25219358	25222482	.	+	.	source_gene_common_name=LOC107987349;source_gene=hg002_chrY_paternal_593;alternative_source_transcripts=hg002_chrY_paternal_593.1;gene_id=NA19239_ch_G0000235;gene_biotype=lncRNA;gene_name=LOC107987349;gene_sources=liftoff;ID=NA19239_ch_G0000235;Name=LOC107987349
NA19239_chrY	CAT	transcript	25219358	25222482	1000	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_593.1;transcript_id=NA19239_ch_T0000615;gene_id=NA19239_ch_G0000235;Parent=NA19239_ch_G0000235;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=NA19239_ch_T0000615;Name=LOC107987349
NA19239_chrY	CAT	exon	25219358	25219440	.	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_593.1;transcript_id=NA19239_ch_T0000615;gene_id=NA19239_ch_G0000235;Parent=NA19239_ch_T0000615;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=exon:NA19239_ch_T0000615:0;Name=LOC107987349;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	25219441	25219557	.	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_593.1;transcript_id=NA19239_ch_T0000615;gene_id=NA19239_ch_G0000235;Parent=NA19239_ch_T0000615;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=intron:NA19239_ch_T0000615:0;Name=LOC107987349;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	25219558	25219618	.	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_593.1;transcript_id=NA19239_ch_T0000615;gene_id=NA19239_ch_G0000235;Parent=NA19239_ch_T0000615;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=exon:NA19239_ch_T0000615:1;Name=LOC107987349;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	25219619	25221153	.	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_593.1;transcript_id=NA19239_ch_T0000615;gene_id=NA19239_ch_G0000235;Parent=NA19239_ch_T0000615;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=intron:NA19239_ch_T0000615:1;Name=LOC107987349;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	25221154	25222482	.	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_593.1;transcript_id=NA19239_ch_T0000615;gene_id=NA19239_ch_G0000235;Parent=NA19239_ch_T0000615;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=exon:NA19239_ch_T0000615:2;Name=LOC107987349;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	25518422	25523317	.	-	.	source_gene_common_name=TTTY3;source_gene=hg002_chrY_paternal_572;alternative_source_transcripts=hg002_chrY_paternal_572.1;gene_id=NA19239_ch_G0000236;gene_biotype=lncRNA;gene_name=TTTY3;gene_sources=liftoff;ID=NA19239_ch_G0000236;Name=TTTY3
NA19239_chrY	CAT	transcript	25518422	25523317	1000	-	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=NA19239_ch_T0000616;gene_id=NA19239_ch_G0000236;Parent=NA19239_ch_G0000236;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=NA19239_ch_T0000616;Name=TTTY3
NA19239_chrY	CAT	exon	25518422	25518526	.	-	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=NA19239_ch_T0000616;gene_id=NA19239_ch_G0000236;Parent=NA19239_ch_T0000616;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=exon:NA19239_ch_T0000616:0;Name=TTTY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	25518527	25520880	.	-	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=NA19239_ch_T0000616;gene_id=NA19239_ch_G0000236;Parent=NA19239_ch_T0000616;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=intron:NA19239_ch_T0000616:0;Name=TTTY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	25520881	25521015	.	-	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=NA19239_ch_T0000616;gene_id=NA19239_ch_G0000236;Parent=NA19239_ch_T0000616;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=exon:NA19239_ch_T0000616:1;Name=TTTY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	25521016	25523213	.	-	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=NA19239_ch_T0000616;gene_id=NA19239_ch_G0000236;Parent=NA19239_ch_T0000616;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=intron:NA19239_ch_T0000616:1;Name=TTTY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	25523214	25523317	.	-	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=NA19239_ch_T0000616;gene_id=NA19239_ch_G0000236;Parent=NA19239_ch_T0000616;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=exon:NA19239_ch_T0000616:2;Name=TTTY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	25626298	25629694	.	-	.	source_gene_common_name=CDY1;source_gene=hg002_chrY_paternal_638;alternative_source_transcripts=hg002_chrY_paternal_565.3;gene_id=NA19239_ch_G0000237;gene_biotype=protein_coding;gene_name=CDY1;gene_sources=liftoff;ID=NA19239_ch_G0000237;Name=CDY1
NA19239_chrY	CAT	transcript	25626298	25629692	1000	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=NA19239_ch_T0000617;gene_id=NA19239_ch_G0000237;Parent=NA19239_ch_G0000237;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=NA19239_ch_T0000617;Name=CDY1
NA19239_chrY	CAT	exon	25626298	25626379	.	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=NA19239_ch_T0000617;gene_id=NA19239_ch_G0000237;Parent=NA19239_ch_T0000617;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=exon:NA19239_ch_T0000617:0;Name=CDY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	25626380	25627154	.	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=NA19239_ch_T0000617;gene_id=NA19239_ch_G0000237;Parent=NA19239_ch_T0000617;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=intron:NA19239_ch_T0000617:0;Name=CDY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	25627155	25627354	.	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=NA19239_ch_T0000617;gene_id=NA19239_ch_G0000237;Parent=NA19239_ch_T0000617;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=exon:NA19239_ch_T0000617:1;Name=CDY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	25627355	25627774	.	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=NA19239_ch_T0000617;gene_id=NA19239_ch_G0000237;Parent=NA19239_ch_T0000617;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=intron:NA19239_ch_T0000617:1;Name=CDY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	25627775	25629692	.	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=NA19239_ch_T0000617;gene_id=NA19239_ch_G0000237;Parent=NA19239_ch_T0000617;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=exon:NA19239_ch_T0000617:2;Name=CDY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	25626907	25629692	100	-	.	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=NA19239_ch_T0000618;gene_id=NA19239_ch_G0000237;Parent=NA19239_ch_G0000237;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=NA19239_ch_T0000618;Name=CDY1
NA19239_chrY	CAT	exon	25626907	25627354	.	-	.	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=NA19239_ch_T0000618;gene_id=NA19239_ch_G0000237;Parent=NA19239_ch_T0000618;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=exon:NA19239_ch_T0000618:0;Name=CDY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	25627282	25627354	.	-	1	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=NA19239_ch_T0000618;gene_id=NA19239_ch_G0000237;Parent=NA19239_ch_T0000618;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=CDS:NA19239_ch_T0000618:0;Name=CDY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	25627282	25627284	.	-	0	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=NA19239_ch_T0000618;gene_id=NA19239_ch_G0000237;Parent=NA19239_ch_T0000618;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=stop_codon:NA19239_ch_T0000618;Name=CDY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	25627355	25627774	.	-	.	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=NA19239_ch_T0000618;gene_id=NA19239_ch_G0000237;Parent=NA19239_ch_T0000618;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=intron:NA19239_ch_T0000618:0;Name=CDY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	25627775	25629692	.	-	.	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=NA19239_ch_T0000618;gene_id=NA19239_ch_G0000237;Parent=NA19239_ch_T0000618;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=exon:NA19239_ch_T0000618:1;Name=CDY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	25627775	25629366	.	-	0	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=NA19239_ch_T0000618;gene_id=NA19239_ch_G0000237;Parent=NA19239_ch_T0000618;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=CDS:NA19239_ch_T0000618:1;Name=CDY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	25629364	25629366	.	-	0	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=NA19239_ch_T0000618;gene_id=NA19239_ch_G0000237;Parent=NA19239_ch_T0000618;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=start_codon:NA19239_ch_T0000618;Name=CDY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	25626907	25629694	100	-	.	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=NA19239_ch_T0000619;gene_id=NA19239_ch_G0000237;Parent=NA19239_ch_G0000237;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=NA19239_ch_T0000619;Name=CDY1
NA19239_chrY	CAT	exon	25626907	25627354	.	-	.	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=NA19239_ch_T0000619;gene_id=NA19239_ch_G0000237;Parent=NA19239_ch_T0000619;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=exon:NA19239_ch_T0000619:0;Name=CDY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	25627334	25627354	.	-	0	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=NA19239_ch_T0000619;gene_id=NA19239_ch_G0000237;Parent=NA19239_ch_T0000619;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=CDS:NA19239_ch_T0000619:0;Name=CDY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	25627334	25627336	.	-	0	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=NA19239_ch_T0000619;gene_id=NA19239_ch_G0000237;Parent=NA19239_ch_T0000619;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=stop_codon:NA19239_ch_T0000619;Name=CDY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	25627355	25627974	.	-	.	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=NA19239_ch_T0000619;gene_id=NA19239_ch_G0000237;Parent=NA19239_ch_T0000619;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=intron:NA19239_ch_T0000619:0;Name=CDY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	25627975	25629694	.	-	.	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=NA19239_ch_T0000619;gene_id=NA19239_ch_G0000237;Parent=NA19239_ch_T0000619;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=exon:NA19239_ch_T0000619:1;Name=CDY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	25627975	25629366	.	-	0	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=NA19239_ch_T0000619;gene_id=NA19239_ch_G0000237;Parent=NA19239_ch_T0000619;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=CDS:NA19239_ch_T0000619:1;Name=CDY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	25629364	25629366	.	-	0	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=NA19239_ch_T0000619;gene_id=NA19239_ch_G0000237;Parent=NA19239_ch_T0000619;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=start_codon:NA19239_ch_T0000619;Name=CDY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	25627471	25629692	100	-	.	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=NA19239_ch_T0000620;gene_id=NA19239_ch_G0000237;Parent=NA19239_ch_G0000237;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=NA19239_ch_T0000620;Name=CDY1
NA19239_chrY	CAT	exon	25627471	25629692	.	-	.	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=NA19239_ch_T0000620;gene_id=NA19239_ch_G0000237;Parent=NA19239_ch_T0000620;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=exon:NA19239_ch_T0000620:0;Name=CDY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	25627744	25629366	.	-	0	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=NA19239_ch_T0000620;gene_id=NA19239_ch_G0000237;Parent=NA19239_ch_T0000620;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=CDS:NA19239_ch_T0000620:0;Name=CDY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	25627744	25627746	.	-	0	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=NA19239_ch_T0000620;gene_id=NA19239_ch_G0000237;Parent=NA19239_ch_T0000620;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=stop_codon:NA19239_ch_T0000620;Name=CDY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	25629364	25629366	.	-	0	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=NA19239_ch_T0000620;gene_id=NA19239_ch_G0000237;Parent=NA19239_ch_T0000620;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=start_codon:NA19239_ch_T0000620;Name=CDY1;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	25765091	25768888	.	-	.	source_gene_common_name=CSPG4P1Y;source_gene=hg002_chrY_paternal_556;gene_id=NA19239_ch_G0000238;gene_biotype=transcribed_pseudogene;gene_name=CSPG4P1Y;gene_sources=transMap_pairwise;ID=NA19239_ch_G0000238;Name=CSPG4P1Y
NA19239_chrY	CAT	transcript	25765091	25768888	1000	-	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=NA19239_ch_T0000621;gene_id=NA19239_ch_G0000238;Parent=NA19239_ch_G0000238;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=NA19239_ch_T0000621;Name=CSPG4P1Y
NA19239_chrY	CAT	exon	25765091	25765162	.	-	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=NA19239_ch_T0000621;gene_id=NA19239_ch_G0000238;Parent=NA19239_ch_T0000621;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=exon:NA19239_ch_T0000621:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	25765163	25768165	.	-	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=NA19239_ch_T0000621;gene_id=NA19239_ch_G0000238;Parent=NA19239_ch_T0000621;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=intron:NA19239_ch_T0000621:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	25768166	25768888	.	-	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=NA19239_ch_T0000621;gene_id=NA19239_ch_G0000238;Parent=NA19239_ch_T0000621;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=exon:NA19239_ch_T0000621:1;Name=CSPG4P1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	25788080	25789610	.	+	.	source_gene_common_name=LOC102724034;source_gene=hg002_chrY_paternal_626;gene_id=NA19239_ch_G0000239;gene_biotype=lncRNA;gene_name=LOC102724034;gene_sources=liftoff;ID=NA19239_ch_G0000239;Name=LOC102724034
NA19239_chrY	CAT	transcript	25788080	25789610	1000	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;transcript_id=NA19239_ch_T0000622;gene_id=NA19239_ch_G0000239;Parent=NA19239_ch_G0000239;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=NA19239_ch_T0000622;Name=LOC102724034
NA19239_chrY	CAT	exon	25788080	25788105	.	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;transcript_id=NA19239_ch_T0000622;gene_id=NA19239_ch_G0000239;Parent=NA19239_ch_T0000622;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=exon:NA19239_ch_T0000622:0;Name=LOC102724034;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	25788106	25788793	.	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;transcript_id=NA19239_ch_T0000622;gene_id=NA19239_ch_G0000239;Parent=NA19239_ch_T0000622;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=intron:NA19239_ch_T0000622:0;Name=LOC102724034;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	25788794	25788918	.	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;transcript_id=NA19239_ch_T0000622;gene_id=NA19239_ch_G0000239;Parent=NA19239_ch_T0000622;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=exon:NA19239_ch_T0000622:1;Name=LOC102724034;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	25788919	25789186	.	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;transcript_id=NA19239_ch_T0000622;gene_id=NA19239_ch_G0000239;Parent=NA19239_ch_T0000622;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=intron:NA19239_ch_T0000622:1;Name=LOC102724034;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	25789187	25789610	.	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;transcript_id=NA19239_ch_T0000622;gene_id=NA19239_ch_G0000239;Parent=NA19239_ch_T0000622;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=exon:NA19239_ch_T0000622:2;Name=LOC102724034;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	25791609	25796474	.	-	.	source_gene_common_name=GOLGA2P3Y;source_gene=hg002_chrY_paternal_624;gene_id=NA19239_ch_G0000240;gene_biotype=transcribed_pseudogene;gene_name=GOLGA2P3Y;gene_sources=liftoff;ID=NA19239_ch_G0000240;Name=GOLGA2P3Y
NA19239_chrY	CAT	transcript	25791609	25796474	1000	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA19239_ch_T0000623;gene_id=NA19239_ch_G0000240;Parent=NA19239_ch_G0000240;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=NA19239_ch_T0000623;Name=GOLGA2P3Y
NA19239_chrY	CAT	exon	25791609	25791692	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA19239_ch_T0000623;gene_id=NA19239_ch_G0000240;Parent=NA19239_ch_T0000623;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:NA19239_ch_T0000623:0;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	25791693	25791774	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA19239_ch_T0000623;gene_id=NA19239_ch_G0000240;Parent=NA19239_ch_T0000623;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:NA19239_ch_T0000623:0;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	25791775	25791867	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA19239_ch_T0000623;gene_id=NA19239_ch_G0000240;Parent=NA19239_ch_T0000623;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:NA19239_ch_T0000623:1;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	25791868	25791956	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA19239_ch_T0000623;gene_id=NA19239_ch_G0000240;Parent=NA19239_ch_T0000623;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:NA19239_ch_T0000623:1;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	25791957	25792145	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA19239_ch_T0000623;gene_id=NA19239_ch_G0000240;Parent=NA19239_ch_T0000623;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:NA19239_ch_T0000623:2;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	25792146	25792400	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA19239_ch_T0000623;gene_id=NA19239_ch_G0000240;Parent=NA19239_ch_T0000623;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:NA19239_ch_T0000623:2;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	25792401	25792489	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA19239_ch_T0000623;gene_id=NA19239_ch_G0000240;Parent=NA19239_ch_T0000623;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:NA19239_ch_T0000623:3;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	25792490	25792909	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA19239_ch_T0000623;gene_id=NA19239_ch_G0000240;Parent=NA19239_ch_T0000623;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:NA19239_ch_T0000623:3;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	25792910	25792984	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA19239_ch_T0000623;gene_id=NA19239_ch_G0000240;Parent=NA19239_ch_T0000623;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:NA19239_ch_T0000623:4;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	25792985	25794340	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA19239_ch_T0000623;gene_id=NA19239_ch_G0000240;Parent=NA19239_ch_T0000623;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:NA19239_ch_T0000623:4;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	25794341	25794398	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA19239_ch_T0000623;gene_id=NA19239_ch_G0000240;Parent=NA19239_ch_T0000623;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:NA19239_ch_T0000623:5;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	25794399	25794694	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA19239_ch_T0000623;gene_id=NA19239_ch_G0000240;Parent=NA19239_ch_T0000623;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:NA19239_ch_T0000623:5;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	25794695	25795046	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA19239_ch_T0000623;gene_id=NA19239_ch_G0000240;Parent=NA19239_ch_T0000623;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:NA19239_ch_T0000623:6;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	25795047	25796166	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA19239_ch_T0000623;gene_id=NA19239_ch_G0000240;Parent=NA19239_ch_T0000623;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:NA19239_ch_T0000623:6;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	25796167	25796245	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA19239_ch_T0000623;gene_id=NA19239_ch_G0000240;Parent=NA19239_ch_T0000623;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:NA19239_ch_T0000623:7;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	25796246	25796431	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA19239_ch_T0000623;gene_id=NA19239_ch_G0000240;Parent=NA19239_ch_T0000623;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:NA19239_ch_T0000623:7;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	25796432	25796474	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA19239_ch_T0000623;gene_id=NA19239_ch_G0000240;Parent=NA19239_ch_T0000623;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:NA19239_ch_T0000623:8;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	25857073	25873491	.	+	.	source_gene_common_name=SEPTIN14P23;source_gene=hg002_chrY_paternal_617;gene_id=NA19239_ch_G0000241;gene_biotype=transcribed_pseudogene;gene_name=SEPTIN14P23;gene_sources=transMap_pairwise;ID=NA19239_ch_G0000241;Name=SEPTIN14P23
NA19239_chrY	CAT	transcript	25857073	25873491	1000	+	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=NA19239_ch_T0000624;gene_id=NA19239_ch_G0000241;Parent=NA19239_ch_G0000241;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=NA19239_ch_T0000624;Name=SEPTIN14P23
NA19239_chrY	CAT	exon	25857073	25857166	.	+	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=NA19239_ch_T0000624;gene_id=NA19239_ch_G0000241;Parent=NA19239_ch_T0000624;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=exon:NA19239_ch_T0000624:0;Name=SEPTIN14P23;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	25857167	25864707	.	+	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=NA19239_ch_T0000624;gene_id=NA19239_ch_G0000241;Parent=NA19239_ch_T0000624;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=intron:NA19239_ch_T0000624:0;Name=SEPTIN14P23;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	25864708	25864876	.	+	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=NA19239_ch_T0000624;gene_id=NA19239_ch_G0000241;Parent=NA19239_ch_T0000624;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=exon:NA19239_ch_T0000624:1;Name=SEPTIN14P23;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	25864877	25872912	.	+	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=NA19239_ch_T0000624;gene_id=NA19239_ch_G0000241;Parent=NA19239_ch_T0000624;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=intron:NA19239_ch_T0000624:1;Name=SEPTIN14P23;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	25872913	25873491	.	+	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=NA19239_ch_T0000624;gene_id=NA19239_ch_G0000241;Parent=NA19239_ch_T0000624;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=exon:NA19239_ch_T0000624:2;Name=SEPTIN14P23;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	25892353	25903355	.	-	.	source_gene_common_name=LOC107987240;source_gene=hg002_chrY_paternal_542;gene_id=NA19239_ch_G0000242;gene_biotype=lncRNA;gene_name=LOC107987240;gene_sources=liftoff;ID=NA19239_ch_G0000242;Name=LOC107987240
NA19239_chrY	CAT	transcript	25892353	25903355	1000	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;transcript_id=NA19239_ch_T0000625;gene_id=NA19239_ch_G0000242;Parent=NA19239_ch_G0000242;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=NA19239_ch_T0000625;Name=LOC107987240
NA19239_chrY	CAT	exon	25892353	25893010	.	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;transcript_id=NA19239_ch_T0000625;gene_id=NA19239_ch_G0000242;Parent=NA19239_ch_T0000625;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=exon:NA19239_ch_T0000625:0;Name=LOC107987240;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	25893011	25893219	.	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;transcript_id=NA19239_ch_T0000625;gene_id=NA19239_ch_G0000242;Parent=NA19239_ch_T0000625;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=intron:NA19239_ch_T0000625:0;Name=LOC107987240;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	25893220	25893326	.	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;transcript_id=NA19239_ch_T0000625;gene_id=NA19239_ch_G0000242;Parent=NA19239_ch_T0000625;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=exon:NA19239_ch_T0000625:1;Name=LOC107987240;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	25893327	25903123	.	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;transcript_id=NA19239_ch_T0000625;gene_id=NA19239_ch_G0000242;Parent=NA19239_ch_T0000625;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=intron:NA19239_ch_T0000625:1;Name=LOC107987240;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	25903124	25903355	.	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;transcript_id=NA19239_ch_T0000625;gene_id=NA19239_ch_G0000242;Parent=NA19239_ch_T0000625;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=exon:NA19239_ch_T0000625:2;Name=LOC107987240;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	25911236	25912869	.	+	.	source_gene_common_name=LOC101928626;source_gene=hg002_chrY_paternal_541;gene_id=NA19239_ch_G0000243;gene_biotype=lncRNA;gene_name=LOC101928626;gene_sources=liftoff;ID=NA19239_ch_G0000243;Name=LOC101928626
NA19239_chrY	CAT	transcript	25911236	25912869	1000	+	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;transcript_id=NA19239_ch_T0000626;gene_id=NA19239_ch_G0000243;Parent=NA19239_ch_G0000243;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=NA19239_ch_T0000626;Name=LOC101928626
NA19239_chrY	CAT	exon	25911236	25911326	.	+	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;transcript_id=NA19239_ch_T0000626;gene_id=NA19239_ch_G0000243;Parent=NA19239_ch_T0000626;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=exon:NA19239_ch_T0000626:0;Name=LOC101928626;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	25911327	25912021	.	+	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;transcript_id=NA19239_ch_T0000626;gene_id=NA19239_ch_G0000243;Parent=NA19239_ch_T0000626;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=intron:NA19239_ch_T0000626:0;Name=LOC101928626;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	25912022	25912288	.	+	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;transcript_id=NA19239_ch_T0000626;gene_id=NA19239_ch_G0000243;Parent=NA19239_ch_T0000626;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=exon:NA19239_ch_T0000626:1;Name=LOC101928626;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	25912289	25912425	.	+	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;transcript_id=NA19239_ch_T0000626;gene_id=NA19239_ch_G0000243;Parent=NA19239_ch_T0000626;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=intron:NA19239_ch_T0000626:1;Name=LOC101928626;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	25912426	25912869	.	+	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;transcript_id=NA19239_ch_T0000626;gene_id=NA19239_ch_G0000243;Parent=NA19239_ch_T0000626;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=exon:NA19239_ch_T0000626:2;Name=LOC101928626;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	26001666	26014771	.	+	.	source_gene_common_name=LOC107987350;source_gene=hg002_chrY_paternal_538;gene_id=NA19239_ch_G0000244;gene_biotype=lncRNA;gene_name=LOC107987350;gene_sources=liftoff;ID=NA19239_ch_G0000244;Name=LOC107987350
NA19239_chrY	CAT	transcript	26001666	26014771	1000	+	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;transcript_id=NA19239_ch_T0000627;gene_id=NA19239_ch_G0000244;Parent=NA19239_ch_G0000244;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=NA19239_ch_T0000627;Name=LOC107987350
NA19239_chrY	CAT	exon	26001666	26002121	.	+	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;transcript_id=NA19239_ch_T0000627;gene_id=NA19239_ch_G0000244;Parent=NA19239_ch_T0000627;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:NA19239_ch_T0000627:0;Name=LOC107987350;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26002122	26008091	.	+	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;transcript_id=NA19239_ch_T0000627;gene_id=NA19239_ch_G0000244;Parent=NA19239_ch_T0000627;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=intron:NA19239_ch_T0000627:0;Name=LOC107987350;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26008092	26010256	.	+	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;transcript_id=NA19239_ch_T0000627;gene_id=NA19239_ch_G0000244;Parent=NA19239_ch_T0000627;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:NA19239_ch_T0000627:1;Name=LOC107987350;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26010257	26010897	.	+	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;transcript_id=NA19239_ch_T0000627;gene_id=NA19239_ch_G0000244;Parent=NA19239_ch_T0000627;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=intron:NA19239_ch_T0000627:1;Name=LOC107987350;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26010898	26014771	.	+	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;transcript_id=NA19239_ch_T0000627;gene_id=NA19239_ch_G0000244;Parent=NA19239_ch_T0000627;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:NA19239_ch_T0000627:2;Name=LOC107987350;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	26001666	26014771	1000	+	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;transcript_id=NA19239_ch_T0000628;gene_id=NA19239_ch_G0000244;Parent=NA19239_ch_G0000244;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=NA19239_ch_T0000628;Name=LOC107987350
NA19239_chrY	CAT	exon	26001666	26002121	.	+	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;transcript_id=NA19239_ch_T0000628;gene_id=NA19239_ch_G0000244;Parent=NA19239_ch_T0000628;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:NA19239_ch_T0000628:0;Name=LOC107987350;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26002122	26007623	.	+	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;transcript_id=NA19239_ch_T0000628;gene_id=NA19239_ch_G0000244;Parent=NA19239_ch_T0000628;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=intron:NA19239_ch_T0000628:0;Name=LOC107987350;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26007624	26010256	.	+	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;transcript_id=NA19239_ch_T0000628;gene_id=NA19239_ch_G0000244;Parent=NA19239_ch_T0000628;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:NA19239_ch_T0000628:1;Name=LOC107987350;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26010257	26010897	.	+	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;transcript_id=NA19239_ch_T0000628;gene_id=NA19239_ch_G0000244;Parent=NA19239_ch_T0000628;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=intron:NA19239_ch_T0000628:1;Name=LOC107987350;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26010898	26014771	.	+	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;transcript_id=NA19239_ch_T0000628;gene_id=NA19239_ch_G0000244;Parent=NA19239_ch_T0000628;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:NA19239_ch_T0000628:2;Name=LOC107987350;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	26067044	26068175	.	+	.	source_gene_common_name=TTTY17C;source_gene=hg002_chrY_paternal_537;gene_id=NA19239_ch_G0000245;gene_biotype=lncRNA;gene_name=TTTY17C;gene_sources=liftoff;ID=NA19239_ch_G0000245;Name=TTTY17C
NA19239_chrY	CAT	transcript	26067044	26068175	1000	+	.	source_transcript=hg002_chrY_paternal_537.1;source_transcript_name=hg002_chrY_paternal_537.1;source_gene=hg002_chrY_paternal_537;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_537;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_537.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_537.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=NA19239_ch_T0000629;gene_id=NA19239_ch_G0000245;Parent=NA19239_ch_G0000245;transcript_name=hg002_chrY_paternal_537.1;gene_name=TTTY17C;ID=NA19239_ch_T0000629;Name=TTTY17C
NA19239_chrY	CAT	exon	26067044	26067103	.	+	.	source_transcript=hg002_chrY_paternal_537.1;source_transcript_name=hg002_chrY_paternal_537.1;source_gene=hg002_chrY_paternal_537;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_537;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_537.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=NA19239_ch_T0000629;gene_id=NA19239_ch_G0000245;Parent=NA19239_ch_T0000629;transcript_name=hg002_chrY_paternal_537.1;gene_name=TTTY17C;ID=exon:NA19239_ch_T0000629:0;Name=TTTY17C;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26067104	26068069	.	+	.	source_transcript=hg002_chrY_paternal_537.1;source_transcript_name=hg002_chrY_paternal_537.1;source_gene=hg002_chrY_paternal_537;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_537;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_537.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=NA19239_ch_T0000629;gene_id=NA19239_ch_G0000245;Parent=NA19239_ch_T0000629;transcript_name=hg002_chrY_paternal_537.1;gene_name=TTTY17C;ID=intron:NA19239_ch_T0000629:0;Name=TTTY17C;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26068070	26068175	.	+	.	source_transcript=hg002_chrY_paternal_537.1;source_transcript_name=hg002_chrY_paternal_537.1;source_gene=hg002_chrY_paternal_537;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_537;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_537.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=NA19239_ch_T0000629;gene_id=NA19239_ch_G0000245;Parent=NA19239_ch_T0000629;transcript_name=hg002_chrY_paternal_537.1;gene_name=TTTY17C;ID=exon:NA19239_ch_T0000629:1;Name=TTTY17C;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	26151924	26188738	.	+	.	source_gene_common_name=TTTY4B;source_gene=hg002_chrY_paternal_608;alternative_source_transcripts=hg002_chrY_paternal_534.1;gene_id=NA19239_ch_G0000246;gene_biotype=lncRNA;gene_name=TTTY4B;gene_sources=liftoff;ID=NA19239_ch_G0000246;Name=TTTY4B
NA19239_chrY	CAT	transcript	26151924	26188738	1000	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=NA19239_ch_T0000630;gene_id=NA19239_ch_G0000246;Parent=NA19239_ch_G0000246;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=NA19239_ch_T0000630;Name=TTTY4B
NA19239_chrY	CAT	exon	26151924	26152084	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=NA19239_ch_T0000630;gene_id=NA19239_ch_G0000246;Parent=NA19239_ch_T0000630;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=exon:NA19239_ch_T0000630:0;Name=TTTY4B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26152085	26179081	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=NA19239_ch_T0000630;gene_id=NA19239_ch_G0000246;Parent=NA19239_ch_T0000630;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=intron:NA19239_ch_T0000630:0;Name=TTTY4B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26179082	26179157	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=NA19239_ch_T0000630;gene_id=NA19239_ch_G0000246;Parent=NA19239_ch_T0000630;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=exon:NA19239_ch_T0000630:1;Name=TTTY4B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26179158	26180961	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=NA19239_ch_T0000630;gene_id=NA19239_ch_G0000246;Parent=NA19239_ch_T0000630;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=intron:NA19239_ch_T0000630:1;Name=TTTY4B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26180962	26181069	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=NA19239_ch_T0000630;gene_id=NA19239_ch_G0000246;Parent=NA19239_ch_T0000630;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=exon:NA19239_ch_T0000630:2;Name=TTTY4B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26181070	26187737	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=NA19239_ch_T0000630;gene_id=NA19239_ch_G0000246;Parent=NA19239_ch_T0000630;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=intron:NA19239_ch_T0000630:2;Name=TTTY4B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26187738	26188738	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=NA19239_ch_T0000630;gene_id=NA19239_ch_G0000246;Parent=NA19239_ch_T0000630;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=exon:NA19239_ch_T0000630:3;Name=TTTY4B;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	26199717	26220920	.	+	.	source_gene_common_name=BPY2;source_gene=hg002_chrY_paternal_607;gene_id=NA19239_ch_G0000247;gene_biotype=protein_coding;gene_name=BPY2;gene_sources=liftoff;ID=NA19239_ch_G0000247;Name=BPY2
NA19239_chrY	CAT	transcript	26199717	26220920	10000	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=NA19239_ch_T0000631;gene_id=NA19239_ch_G0000247;Parent=NA19239_ch_G0000247;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=NA19239_ch_T0000631;Name=BPY2
NA19239_chrY	CAT	exon	26199717	26199747	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=NA19239_ch_T0000631;gene_id=NA19239_ch_G0000247;Parent=NA19239_ch_T0000631;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:NA19239_ch_T0000631:0;Name=BPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26199748	26200022	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=NA19239_ch_T0000631;gene_id=NA19239_ch_G0000247;Parent=NA19239_ch_T0000631;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:NA19239_ch_T0000631:0;Name=BPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26200023	26200145	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=NA19239_ch_T0000631;gene_id=NA19239_ch_G0000247;Parent=NA19239_ch_T0000631;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:NA19239_ch_T0000631:1;Name=BPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26200146	26203210	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=NA19239_ch_T0000631;gene_id=NA19239_ch_G0000247;Parent=NA19239_ch_T0000631;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:NA19239_ch_T0000631:1;Name=BPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26203211	26203347	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=NA19239_ch_T0000631;gene_id=NA19239_ch_G0000247;Parent=NA19239_ch_T0000631;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:NA19239_ch_T0000631:2;Name=BPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26203348	26207756	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=NA19239_ch_T0000631;gene_id=NA19239_ch_G0000247;Parent=NA19239_ch_T0000631;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:NA19239_ch_T0000631:2;Name=BPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26207757	26207875	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=NA19239_ch_T0000631;gene_id=NA19239_ch_G0000247;Parent=NA19239_ch_T0000631;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:NA19239_ch_T0000631:3;Name=BPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26207798	26207875	.	+	0	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=NA19239_ch_T0000631;gene_id=NA19239_ch_G0000247;Parent=NA19239_ch_T0000631;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=CDS:NA19239_ch_T0000631:0;Name=BPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	26207798	26207800	.	+	0	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=NA19239_ch_T0000631;gene_id=NA19239_ch_G0000247;Parent=NA19239_ch_T0000631;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=start_codon:NA19239_ch_T0000631;Name=BPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26207876	26209934	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=NA19239_ch_T0000631;gene_id=NA19239_ch_G0000247;Parent=NA19239_ch_T0000631;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:NA19239_ch_T0000631:3;Name=BPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26209935	26210052	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=NA19239_ch_T0000631;gene_id=NA19239_ch_G0000247;Parent=NA19239_ch_T0000631;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:NA19239_ch_T0000631:4;Name=BPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26209935	26210052	.	+	0	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=NA19239_ch_T0000631;gene_id=NA19239_ch_G0000247;Parent=NA19239_ch_T0000631;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=CDS:NA19239_ch_T0000631:1;Name=BPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26210053	26212906	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=NA19239_ch_T0000631;gene_id=NA19239_ch_G0000247;Parent=NA19239_ch_T0000631;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:NA19239_ch_T0000631:4;Name=BPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26212907	26213012	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=NA19239_ch_T0000631;gene_id=NA19239_ch_G0000247;Parent=NA19239_ch_T0000631;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:NA19239_ch_T0000631:5;Name=BPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26212907	26213012	.	+	2	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=NA19239_ch_T0000631;gene_id=NA19239_ch_G0000247;Parent=NA19239_ch_T0000631;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=CDS:NA19239_ch_T0000631:2;Name=BPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26213013	26213704	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=NA19239_ch_T0000631;gene_id=NA19239_ch_G0000247;Parent=NA19239_ch_T0000631;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:NA19239_ch_T0000631:5;Name=BPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26213705	26213829	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=NA19239_ch_T0000631;gene_id=NA19239_ch_G0000247;Parent=NA19239_ch_T0000631;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:NA19239_ch_T0000631:6;Name=BPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26213705	26213723	.	+	1	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=NA19239_ch_T0000631;gene_id=NA19239_ch_G0000247;Parent=NA19239_ch_T0000631;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=CDS:NA19239_ch_T0000631:3;Name=BPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	26213721	26213723	.	+	0	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=NA19239_ch_T0000631;gene_id=NA19239_ch_G0000247;Parent=NA19239_ch_T0000631;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=stop_codon:NA19239_ch_T0000631;Name=BPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26213830	26220379	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=NA19239_ch_T0000631;gene_id=NA19239_ch_G0000247;Parent=NA19239_ch_T0000631;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:NA19239_ch_T0000631:6;Name=BPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26220380	26220504	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=NA19239_ch_T0000631;gene_id=NA19239_ch_G0000247;Parent=NA19239_ch_T0000631;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:NA19239_ch_T0000631:7;Name=BPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26220505	26220598	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=NA19239_ch_T0000631;gene_id=NA19239_ch_G0000247;Parent=NA19239_ch_T0000631;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:NA19239_ch_T0000631:7;Name=BPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26220599	26220920	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=NA19239_ch_T0000631;gene_id=NA19239_ch_G0000247;Parent=NA19239_ch_T0000631;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:NA19239_ch_T0000631:8;Name=BPY2;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	26321815	26325156	.	-	.	source_gene_common_name=LOC105377241;source_gene=hg002_chrY_paternal_525;gene_id=NA19239_ch_G0000248;gene_biotype=lncRNA;gene_name=LOC105377241;gene_sources=liftoff;ID=NA19239_ch_G0000248;Name=LOC105377241
NA19239_chrY	CAT	transcript	26321815	26325156	1000	-	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=NA19239_ch_T0000632;gene_id=NA19239_ch_G0000248;Parent=NA19239_ch_G0000248;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=NA19239_ch_T0000632;Name=LOC105377241
NA19239_chrY	CAT	exon	26321815	26321915	.	-	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=NA19239_ch_T0000632;gene_id=NA19239_ch_G0000248;Parent=NA19239_ch_T0000632;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:NA19239_ch_T0000632:0;Name=LOC105377241;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26321916	26324273	.	-	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=NA19239_ch_T0000632;gene_id=NA19239_ch_G0000248;Parent=NA19239_ch_T0000632;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=intron:NA19239_ch_T0000632:0;Name=LOC105377241;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26324274	26324311	.	-	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=NA19239_ch_T0000632;gene_id=NA19239_ch_G0000248;Parent=NA19239_ch_T0000632;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:NA19239_ch_T0000632:1;Name=LOC105377241;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26324312	26324973	.	-	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=NA19239_ch_T0000632;gene_id=NA19239_ch_G0000248;Parent=NA19239_ch_T0000632;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=intron:NA19239_ch_T0000632:1;Name=LOC105377241;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26324974	26325156	.	-	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=NA19239_ch_T0000632;gene_id=NA19239_ch_G0000248;Parent=NA19239_ch_T0000632;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:NA19239_ch_T0000632:2;Name=LOC105377241;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	26321815	26325156	1000	-	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=NA19239_ch_T0000633;gene_id=NA19239_ch_G0000248;Parent=NA19239_ch_G0000248;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=NA19239_ch_T0000633;Name=LOC105377241
NA19239_chrY	CAT	exon	26321815	26321915	.	-	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=NA19239_ch_T0000633;gene_id=NA19239_ch_G0000248;Parent=NA19239_ch_T0000633;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:NA19239_ch_T0000633:0;Name=LOC105377241;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26321916	26324246	.	-	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=NA19239_ch_T0000633;gene_id=NA19239_ch_G0000248;Parent=NA19239_ch_T0000633;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=intron:NA19239_ch_T0000633:0;Name=LOC105377241;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26324247	26324311	.	-	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=NA19239_ch_T0000633;gene_id=NA19239_ch_G0000248;Parent=NA19239_ch_T0000633;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:NA19239_ch_T0000633:1;Name=LOC105377241;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26324312	26324973	.	-	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=NA19239_ch_T0000633;gene_id=NA19239_ch_G0000248;Parent=NA19239_ch_T0000633;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=intron:NA19239_ch_T0000633:1;Name=LOC105377241;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26324974	26325156	.	-	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=NA19239_ch_T0000633;gene_id=NA19239_ch_G0000248;Parent=NA19239_ch_T0000633;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:NA19239_ch_T0000633:2;Name=LOC105377241;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	26344734	26408418	.	-	.	source_gene_common_name=DAZ4;source_gene=hg002_chrY_paternal_527;gene_id=NA19239_ch_G0000249;gene_biotype=protein_coding;gene_name=DAZ4;gene_sources=liftoff;ID=NA19239_ch_G0000249;Name=DAZ4
NA19239_chrY	CAT	transcript	26344734	26408319	100	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_G0000249;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=NA19239_ch_T0000634;Name=DAZ4
NA19239_chrY	CAT	exon	26344734	26346590	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000634:0;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26346591	26350565	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000634:0;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26350566	26350664	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000634:1;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26350601	26350664	.	-	1	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000634:0;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	26350601	26350603	.	-	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=stop_codon:NA19239_ch_T0000634;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26350665	26355236	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000634:1;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26355237	26355271	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000634:2;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26355237	26355271	.	-	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000634:1;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26355272	26356016	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000634:2;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26356017	26356088	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000634:3;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26356017	26356088	.	-	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000634:2;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26356089	26358400	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000634:3;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26358401	26358472	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000634:4;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26358401	26358472	.	-	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000634:3;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26358473	26360784	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000634:4;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26360785	26360856	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000634:5;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26360785	26360856	.	-	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000634:4;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26360857	26363168	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000634:5;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26363169	26363240	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000634:6;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26363169	26363240	.	-	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000634:5;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26363241	26365553	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000634:6;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26365554	26365625	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000634:7;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26365554	26365625	.	-	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000634:6;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26365626	26380104	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000634:7;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26380105	26380176	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000634:8;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26380105	26380176	.	-	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000634:7;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26380177	26382500	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000634:8;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26382501	26382572	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000634:9;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26382501	26382572	.	-	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000634:8;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26382573	26384889	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000634:9;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26384890	26384961	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000634:10;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26384890	26384961	.	-	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000634:9;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26384962	26387332	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000634:10;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26387333	26387404	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000634:11;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26387333	26387404	.	-	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000634:10;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26387405	26399653	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000634:11;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26399654	26399793	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000634:12;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26399654	26399793	.	-	2	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000634:11;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26399794	26399882	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000634:12;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26399883	26399946	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000634:13;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26399883	26399946	.	-	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000634:12;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26399947	26400382	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000634:13;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26400383	26400434	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000634:14;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26400383	26400434	.	-	1	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000634:13;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26400435	26400994	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000634:14;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26400995	26401086	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000634:15;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26400995	26401086	.	-	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000634:14;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26401087	26401360	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000634:15;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26401361	26401507	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000634:16;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26401361	26401507	.	-	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000634:15;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26401508	26408108	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000634:16;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26408109	26408319	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000634:17;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26408109	26408111	.	-	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000634:16;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	26408109	26408111	.	-	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000634;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000634;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=start_codon:NA19239_ch_T0000634;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	26344734	26408418	100	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_G0000249;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=NA19239_ch_T0000635;Name=DAZ4
NA19239_chrY	CAT	exon	26344734	26346590	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000635:0;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26346591	26350565	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000635:0;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26350566	26350664	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000635:1;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26350601	26350664	.	-	1	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000635:0;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	26350601	26350603	.	-	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=stop_codon:NA19239_ch_T0000635;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26350665	26355236	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000635:1;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26355237	26355271	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000635:2;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26355237	26355271	.	-	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000635:1;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26355272	26356016	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000635:2;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26356017	26356088	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000635:3;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26356017	26356088	.	-	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000635:2;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26356089	26365553	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000635:3;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26365554	26365625	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000635:4;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26365554	26365625	.	-	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000635:3;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26365626	26380104	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000635:4;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26380105	26380176	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000635:5;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26380105	26380176	.	-	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000635:4;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26380177	26382500	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000635:5;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26382501	26382572	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000635:6;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26382501	26382572	.	-	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000635:5;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26382573	26384889	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000635:6;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26384890	26384961	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000635:7;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26384890	26384961	.	-	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000635:6;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26384962	26387332	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000635:7;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26387333	26387404	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000635:8;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26387333	26387404	.	-	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000635:7;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26387405	26399653	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000635:8;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26399654	26399793	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000635:9;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26399654	26399793	.	-	2	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000635:8;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26399794	26399882	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000635:9;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26399883	26399946	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000635:10;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26399883	26399946	.	-	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000635:9;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26399947	26400382	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000635:10;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26400383	26400434	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000635:11;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26400383	26400434	.	-	1	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000635:10;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26400435	26400994	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000635:11;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26400995	26401086	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000635:12;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26400995	26401086	.	-	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000635:11;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26401087	26401360	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000635:12;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26401361	26401507	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000635:13;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26401361	26401507	.	-	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000635:12;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26401508	26408108	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000635:13;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26408109	26408418	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000635:14;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26408109	26408111	.	-	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000635:13;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	26408109	26408111	.	-	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000635;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000635;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=start_codon:NA19239_ch_T0000635;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	26344734	26408418	100	-	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000636;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_G0000249;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=NA19239_ch_T0000636;Name=DAZ4
NA19239_chrY	CAT	exon	26344734	26346590	.	-	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000636;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000636;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000636:0;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26346591	26350565	.	-	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000636;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000636;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000636:0;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26350566	26350664	.	-	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000636;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000636;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000636:1;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26350601	26350664	.	-	1	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000636;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000636;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000636:0;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	26350601	26350603	.	-	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000636;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000636;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=stop_codon:NA19239_ch_T0000636;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26350665	26355236	.	-	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000636;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000636;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000636:1;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26355237	26355271	.	-	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000636;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000636;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000636:2;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26355237	26355271	.	-	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000636;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000636;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000636:1;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26355272	26356016	.	-	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000636;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000636;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000636:2;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26356017	26356088	.	-	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000636;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000636;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000636:3;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26356017	26356088	.	-	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000636;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000636;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000636:2;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26356089	26380104	.	-	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000636;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000636;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000636:3;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26380105	26380176	.	-	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000636;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000636;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000636:4;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26380105	26380176	.	-	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000636;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000636;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000636:3;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26380177	26382500	.	-	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000636;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000636;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000636:4;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26382501	26382572	.	-	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000636;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000636;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000636:5;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26382501	26382572	.	-	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000636;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000636;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000636:4;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26382573	26384889	.	-	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000636;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000636;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000636:5;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26384890	26384961	.	-	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000636;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000636;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000636:6;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26384890	26384961	.	-	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000636;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000636;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000636:5;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26384962	26387332	.	-	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000636;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000636;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000636:6;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26387333	26387404	.	-	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000636;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000636;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000636:7;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26387333	26387404	.	-	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000636;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000636;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000636:6;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26387405	26408108	.	-	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000636;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000636;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19239_ch_T0000636:7;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26408109	26408418	.	-	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000636;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000636;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19239_ch_T0000636:8;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26408109	26408111	.	-	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000636;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000636;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19239_ch_T0000636:7;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	26408109	26408111	.	-	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19239_ch_T0000636;gene_id=NA19239_ch_G0000249;Parent=NA19239_ch_T0000636;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=start_codon:NA19239_ch_T0000636;Name=DAZ4;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	26428846	26479174	.	+	.	source_gene_common_name=DAZ3;source_gene=hg002_chrY_paternal_526;gene_id=NA19239_ch_G0000250;gene_biotype=protein_coding;gene_name=DAZ3;gene_sources=liftoff;ID=NA19239_ch_G0000250;Name=DAZ3
NA19239_chrY	CAT	transcript	26428846	26479174	100	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_G0000250;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=NA19239_ch_T0000637;Name=DAZ3
NA19239_chrY	CAT	exon	26428846	26429056	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19239_ch_T0000637:0;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26429054	26429056	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19239_ch_T0000637:0;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	26429054	26429056	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=start_codon:NA19239_ch_T0000637;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26429057	26438911	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19239_ch_T0000637:0;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26438912	26438983	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19239_ch_T0000637:1;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26438912	26438983	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19239_ch_T0000637:1;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26438984	26441354	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19239_ch_T0000637:1;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26441355	26441426	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19239_ch_T0000637:2;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26441355	26441426	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19239_ch_T0000637:2;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26441427	26443744	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19239_ch_T0000637:2;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26443745	26443816	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19239_ch_T0000637:3;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26443745	26443816	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19239_ch_T0000637:3;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26443817	26446140	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19239_ch_T0000637:3;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26446141	26446212	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19239_ch_T0000637:4;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26446141	26446212	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19239_ch_T0000637:4;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26446213	26448517	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19239_ch_T0000637:4;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26448518	26448589	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19239_ch_T0000637:5;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26448518	26448589	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19239_ch_T0000637:5;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26448590	26450898	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19239_ch_T0000637:5;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26450899	26450970	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19239_ch_T0000637:6;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26450899	26450970	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19239_ch_T0000637:6;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26450971	26453275	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19239_ch_T0000637:6;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26453276	26453347	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19239_ch_T0000637:7;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26453276	26453347	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19239_ch_T0000637:7;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26453348	26455655	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19239_ch_T0000637:7;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26455656	26455727	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19239_ch_T0000637:8;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26455656	26455727	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19239_ch_T0000637:8;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26455728	26458032	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19239_ch_T0000637:8;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26458033	26458104	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19239_ch_T0000637:9;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26458033	26458104	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19239_ch_T0000637:9;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26458105	26467819	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19239_ch_T0000637:9;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26467820	26467891	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19239_ch_T0000637:10;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26467820	26467891	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19239_ch_T0000637:10;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26467892	26468636	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19239_ch_T0000637:10;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26468637	26468671	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19239_ch_T0000637:11;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26468637	26468671	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19239_ch_T0000637:11;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26468672	26473243	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19239_ch_T0000637:11;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26473244	26473342	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19239_ch_T0000637:12;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26473244	26473307	.	+	1	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19239_ch_T0000637:12;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	26473305	26473307	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=stop_codon:NA19239_ch_T0000637;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26473343	26477317	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19239_ch_T0000637:12;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26477318	26479174	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19239_ch_T0000637;gene_id=NA19239_ch_G0000250;Parent=NA19239_ch_T0000637;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19239_ch_T0000637:13;Name=DAZ3;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	26498786	26502127	.	+	.	source_gene_common_name=LOC105377238;source_gene=hg002_chrY_paternal_599;gene_id=NA19239_ch_G0000251;gene_biotype=lncRNA;gene_name=LOC105377238;gene_sources=liftoff;ID=NA19239_ch_G0000251;Name=LOC105377238
NA19239_chrY	CAT	transcript	26498786	26502127	1000	+	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=NA19239_ch_T0000638;gene_id=NA19239_ch_G0000251;Parent=NA19239_ch_G0000251;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=NA19239_ch_T0000638;Name=LOC105377238
NA19239_chrY	CAT	exon	26498786	26498968	.	+	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=NA19239_ch_T0000638;gene_id=NA19239_ch_G0000251;Parent=NA19239_ch_T0000638;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:NA19239_ch_T0000638:0;Name=LOC105377238;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26498969	26499630	.	+	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=NA19239_ch_T0000638;gene_id=NA19239_ch_G0000251;Parent=NA19239_ch_T0000638;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=intron:NA19239_ch_T0000638:0;Name=LOC105377238;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26499631	26499695	.	+	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=NA19239_ch_T0000638;gene_id=NA19239_ch_G0000251;Parent=NA19239_ch_T0000638;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:NA19239_ch_T0000638:1;Name=LOC105377238;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26499696	26502026	.	+	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=NA19239_ch_T0000638;gene_id=NA19239_ch_G0000251;Parent=NA19239_ch_T0000638;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=intron:NA19239_ch_T0000638:1;Name=LOC105377238;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26502027	26502127	.	+	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=NA19239_ch_T0000638;gene_id=NA19239_ch_G0000251;Parent=NA19239_ch_T0000638;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:NA19239_ch_T0000638:2;Name=LOC105377238;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	26498786	26502127	1000	+	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=NA19239_ch_T0000639;gene_id=NA19239_ch_G0000251;Parent=NA19239_ch_G0000251;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=NA19239_ch_T0000639;Name=LOC105377238
NA19239_chrY	CAT	exon	26498786	26498968	.	+	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=NA19239_ch_T0000639;gene_id=NA19239_ch_G0000251;Parent=NA19239_ch_T0000639;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:NA19239_ch_T0000639:0;Name=LOC105377238;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26498969	26499630	.	+	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=NA19239_ch_T0000639;gene_id=NA19239_ch_G0000251;Parent=NA19239_ch_T0000639;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=intron:NA19239_ch_T0000639:0;Name=LOC105377238;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26499631	26499668	.	+	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=NA19239_ch_T0000639;gene_id=NA19239_ch_G0000251;Parent=NA19239_ch_T0000639;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:NA19239_ch_T0000639:1;Name=LOC105377238;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26499669	26502026	.	+	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=NA19239_ch_T0000639;gene_id=NA19239_ch_G0000251;Parent=NA19239_ch_T0000639;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=intron:NA19239_ch_T0000639:1;Name=LOC105377238;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26502027	26502127	.	+	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=NA19239_ch_T0000639;gene_id=NA19239_ch_G0000251;Parent=NA19239_ch_T0000639;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:NA19239_ch_T0000639:2;Name=LOC105377238;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	26603029	26624232	.	-	.	source_gene_common_name=BPY2C;source_gene=hg002_chrY_paternal_520;alternative_source_transcripts=hg002_chrY_paternal_520.1;gene_id=NA19239_ch_G0000252;gene_biotype=protein_coding;gene_name=BPY2C;gene_sources=liftoff;ID=NA19239_ch_G0000252;Name=BPY2C
NA19239_chrY	CAT	transcript	26603029	26624232	100	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000640;gene_id=NA19239_ch_G0000252;Parent=NA19239_ch_G0000252;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=NA19239_ch_T0000640;Name=BPY2C
NA19239_chrY	CAT	exon	26603029	26603350	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000640;gene_id=NA19239_ch_G0000252;Parent=NA19239_ch_T0000640;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:NA19239_ch_T0000640:0;Name=BPY2C;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26603351	26603444	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000640;gene_id=NA19239_ch_G0000252;Parent=NA19239_ch_T0000640;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:NA19239_ch_T0000640:0;Name=BPY2C;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26603445	26603569	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000640;gene_id=NA19239_ch_G0000252;Parent=NA19239_ch_T0000640;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:NA19239_ch_T0000640:1;Name=BPY2C;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26603570	26610119	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000640;gene_id=NA19239_ch_G0000252;Parent=NA19239_ch_T0000640;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:NA19239_ch_T0000640:1;Name=BPY2C;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26610120	26610244	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000640;gene_id=NA19239_ch_G0000252;Parent=NA19239_ch_T0000640;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:NA19239_ch_T0000640:2;Name=BPY2C;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26610226	26610244	.	-	1	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000640;gene_id=NA19239_ch_G0000252;Parent=NA19239_ch_T0000640;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=CDS:NA19239_ch_T0000640:0;Name=BPY2C;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	26610226	26610228	.	-	0	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000640;gene_id=NA19239_ch_G0000252;Parent=NA19239_ch_T0000640;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=stop_codon:NA19239_ch_T0000640;Name=BPY2C;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26610245	26610936	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000640;gene_id=NA19239_ch_G0000252;Parent=NA19239_ch_T0000640;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:NA19239_ch_T0000640:2;Name=BPY2C;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26610937	26611042	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000640;gene_id=NA19239_ch_G0000252;Parent=NA19239_ch_T0000640;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:NA19239_ch_T0000640:3;Name=BPY2C;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26610937	26611042	.	-	2	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000640;gene_id=NA19239_ch_G0000252;Parent=NA19239_ch_T0000640;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=CDS:NA19239_ch_T0000640:1;Name=BPY2C;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26611043	26613896	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000640;gene_id=NA19239_ch_G0000252;Parent=NA19239_ch_T0000640;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:NA19239_ch_T0000640:3;Name=BPY2C;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26613897	26614014	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000640;gene_id=NA19239_ch_G0000252;Parent=NA19239_ch_T0000640;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:NA19239_ch_T0000640:4;Name=BPY2C;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26613897	26614014	.	-	0	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000640;gene_id=NA19239_ch_G0000252;Parent=NA19239_ch_T0000640;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=CDS:NA19239_ch_T0000640:2;Name=BPY2C;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26614015	26616073	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000640;gene_id=NA19239_ch_G0000252;Parent=NA19239_ch_T0000640;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:NA19239_ch_T0000640:4;Name=BPY2C;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26616074	26616192	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000640;gene_id=NA19239_ch_G0000252;Parent=NA19239_ch_T0000640;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:NA19239_ch_T0000640:5;Name=BPY2C;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	26616074	26616151	.	-	0	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000640;gene_id=NA19239_ch_G0000252;Parent=NA19239_ch_T0000640;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=CDS:NA19239_ch_T0000640:3;Name=BPY2C;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	26616149	26616151	.	-	0	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000640;gene_id=NA19239_ch_G0000252;Parent=NA19239_ch_T0000640;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=start_codon:NA19239_ch_T0000640;Name=BPY2C;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26616193	26620601	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000640;gene_id=NA19239_ch_G0000252;Parent=NA19239_ch_T0000640;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:NA19239_ch_T0000640:5;Name=BPY2C;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26620602	26620738	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000640;gene_id=NA19239_ch_G0000252;Parent=NA19239_ch_T0000640;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:NA19239_ch_T0000640:6;Name=BPY2C;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26620739	26623803	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000640;gene_id=NA19239_ch_G0000252;Parent=NA19239_ch_T0000640;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:NA19239_ch_T0000640:6;Name=BPY2C;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26623804	26623926	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000640;gene_id=NA19239_ch_G0000252;Parent=NA19239_ch_T0000640;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:NA19239_ch_T0000640:7;Name=BPY2C;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26623927	26624201	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000640;gene_id=NA19239_ch_G0000252;Parent=NA19239_ch_T0000640;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:NA19239_ch_T0000640:7;Name=BPY2C;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26624202	26624232	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19239_ch_T0000640;gene_id=NA19239_ch_G0000252;Parent=NA19239_ch_T0000640;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:NA19239_ch_T0000640:8;Name=BPY2C;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	26635211	26672017	.	-	.	source_gene_common_name=TTTY4;source_gene=hg002_chrY_paternal_534;gene_id=NA19239_ch_G0000253;gene_biotype=lncRNA;gene_name=TTTY4;gene_sources=liftoff;ID=NA19239_ch_G0000253;Name=TTTY4
NA19239_chrY	CAT	transcript	26635211	26672017	1000	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=NA19239_ch_T0000641;gene_id=NA19239_ch_G0000253;Parent=NA19239_ch_G0000253;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=NA19239_ch_T0000641;Name=TTTY4
NA19239_chrY	CAT	exon	26635211	26636211	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=NA19239_ch_T0000641;gene_id=NA19239_ch_G0000253;Parent=NA19239_ch_T0000641;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=exon:NA19239_ch_T0000641:0;Name=TTTY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26636212	26642861	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=NA19239_ch_T0000641;gene_id=NA19239_ch_G0000253;Parent=NA19239_ch_T0000641;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=intron:NA19239_ch_T0000641:0;Name=TTTY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26642862	26642969	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=NA19239_ch_T0000641;gene_id=NA19239_ch_G0000253;Parent=NA19239_ch_T0000641;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=exon:NA19239_ch_T0000641:1;Name=TTTY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26642970	26644773	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=NA19239_ch_T0000641;gene_id=NA19239_ch_G0000253;Parent=NA19239_ch_T0000641;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=intron:NA19239_ch_T0000641:1;Name=TTTY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26644774	26644849	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=NA19239_ch_T0000641;gene_id=NA19239_ch_G0000253;Parent=NA19239_ch_T0000641;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=exon:NA19239_ch_T0000641:2;Name=TTTY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26644850	26671856	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=NA19239_ch_T0000641;gene_id=NA19239_ch_G0000253;Parent=NA19239_ch_T0000641;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=intron:NA19239_ch_T0000641:2;Name=TTTY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26671857	26672017	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=NA19239_ch_T0000641;gene_id=NA19239_ch_G0000253;Parent=NA19239_ch_T0000641;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=exon:NA19239_ch_T0000641:3;Name=TTTY4;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	26755772	26756903	.	-	.	source_gene_common_name=TTTY17B;source_gene=hg002_chrY_paternal_611;alternative_source_transcripts=hg002_chrY_paternal_516.1;gene_id=NA19239_ch_G0000254;gene_biotype=lncRNA;gene_name=TTTY17B;gene_sources=liftoff;ID=NA19239_ch_G0000254;Name=TTTY17B
NA19239_chrY	CAT	transcript	26755772	26756903	1000	-	.	source_transcript=hg002_chrY_paternal_611.1;source_transcript_name=hg002_chrY_paternal_611.1;source_gene=hg002_chrY_paternal_611;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_611;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_611.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_611.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=hg002_chrY_paternal_516.1;transcript_id=NA19239_ch_T0000642;gene_id=NA19239_ch_G0000254;Parent=NA19239_ch_G0000254;transcript_name=hg002_chrY_paternal_611.1;gene_name=TTTY17B;ID=NA19239_ch_T0000642;Name=TTTY17B
NA19239_chrY	CAT	exon	26755772	26755877	.	-	.	source_transcript=hg002_chrY_paternal_611.1;source_transcript_name=hg002_chrY_paternal_611.1;source_gene=hg002_chrY_paternal_611;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_611;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_611.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_611.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=hg002_chrY_paternal_516.1;transcript_id=NA19239_ch_T0000642;gene_id=NA19239_ch_G0000254;Parent=NA19239_ch_T0000642;transcript_name=hg002_chrY_paternal_611.1;gene_name=TTTY17B;ID=exon:NA19239_ch_T0000642:0;Name=TTTY17B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26755878	26756843	.	-	.	source_transcript=hg002_chrY_paternal_611.1;source_transcript_name=hg002_chrY_paternal_611.1;source_gene=hg002_chrY_paternal_611;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_611;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_611.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_611.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=hg002_chrY_paternal_516.1;transcript_id=NA19239_ch_T0000642;gene_id=NA19239_ch_G0000254;Parent=NA19239_ch_T0000642;transcript_name=hg002_chrY_paternal_611.1;gene_name=TTTY17B;ID=intron:NA19239_ch_T0000642:0;Name=TTTY17B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26756844	26756903	.	-	.	source_transcript=hg002_chrY_paternal_611.1;source_transcript_name=hg002_chrY_paternal_611.1;source_gene=hg002_chrY_paternal_611;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_611;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_611.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_611.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=hg002_chrY_paternal_516.1;transcript_id=NA19239_ch_T0000642;gene_id=NA19239_ch_G0000254;Parent=NA19239_ch_T0000642;transcript_name=hg002_chrY_paternal_611.1;gene_name=TTTY17B;ID=exon:NA19239_ch_T0000642:1;Name=TTTY17B;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	26809174	26822279	.	-	.	source_gene_common_name=LOC107987350;source_gene=hg002_chrY_paternal_612;gene_id=NA19239_ch_G0000255;gene_biotype=lncRNA;gene_name=LOC107987350;gene_sources=liftoff;ID=NA19239_ch_G0000255;Name=LOC107987350
NA19239_chrY	CAT	transcript	26809174	26822279	1000	-	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;transcript_id=NA19239_ch_T0000643;gene_id=NA19239_ch_G0000255;Parent=NA19239_ch_G0000255;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=NA19239_ch_T0000643;Name=LOC107987350
NA19239_chrY	CAT	exon	26809174	26813047	.	-	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;transcript_id=NA19239_ch_T0000643;gene_id=NA19239_ch_G0000255;Parent=NA19239_ch_T0000643;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:NA19239_ch_T0000643:0;Name=LOC107987350;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26813048	26813688	.	-	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;transcript_id=NA19239_ch_T0000643;gene_id=NA19239_ch_G0000255;Parent=NA19239_ch_T0000643;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=intron:NA19239_ch_T0000643:0;Name=LOC107987350;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26813689	26816321	.	-	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;transcript_id=NA19239_ch_T0000643;gene_id=NA19239_ch_G0000255;Parent=NA19239_ch_T0000643;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:NA19239_ch_T0000643:1;Name=LOC107987350;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26816322	26821823	.	-	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;transcript_id=NA19239_ch_T0000643;gene_id=NA19239_ch_G0000255;Parent=NA19239_ch_T0000643;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=intron:NA19239_ch_T0000643:1;Name=LOC107987350;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26821824	26822279	.	-	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;transcript_id=NA19239_ch_T0000643;gene_id=NA19239_ch_G0000255;Parent=NA19239_ch_T0000643;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:NA19239_ch_T0000643:2;Name=LOC107987350;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	26809174	26822279	1000	-	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;transcript_id=NA19239_ch_T0000644;gene_id=NA19239_ch_G0000255;Parent=NA19239_ch_G0000255;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=NA19239_ch_T0000644;Name=LOC107987350
NA19239_chrY	CAT	exon	26809174	26813047	.	-	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;transcript_id=NA19239_ch_T0000644;gene_id=NA19239_ch_G0000255;Parent=NA19239_ch_T0000644;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:NA19239_ch_T0000644:0;Name=LOC107987350;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26813048	26813688	.	-	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;transcript_id=NA19239_ch_T0000644;gene_id=NA19239_ch_G0000255;Parent=NA19239_ch_T0000644;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=intron:NA19239_ch_T0000644:0;Name=LOC107987350;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26813689	26815853	.	-	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;transcript_id=NA19239_ch_T0000644;gene_id=NA19239_ch_G0000255;Parent=NA19239_ch_T0000644;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:NA19239_ch_T0000644:1;Name=LOC107987350;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26815854	26821823	.	-	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;transcript_id=NA19239_ch_T0000644;gene_id=NA19239_ch_G0000255;Parent=NA19239_ch_T0000644;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=intron:NA19239_ch_T0000644:1;Name=LOC107987350;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26821824	26822279	.	-	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;transcript_id=NA19239_ch_T0000644;gene_id=NA19239_ch_G0000255;Parent=NA19239_ch_T0000644;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:NA19239_ch_T0000644:2;Name=LOC107987350;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	26911034	26912667	.	-	.	source_gene_common_name=LOC101928626;source_gene=hg002_chrY_paternal_615;gene_id=NA19239_ch_G0000256;gene_biotype=lncRNA;gene_name=LOC101928626;gene_sources=liftoff;ID=NA19239_ch_G0000256;Name=LOC101928626
NA19239_chrY	CAT	transcript	26911034	26912667	1000	-	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;transcript_id=NA19239_ch_T0000645;gene_id=NA19239_ch_G0000256;Parent=NA19239_ch_G0000256;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=NA19239_ch_T0000645;Name=LOC101928626
NA19239_chrY	CAT	exon	26911034	26911477	.	-	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;transcript_id=NA19239_ch_T0000645;gene_id=NA19239_ch_G0000256;Parent=NA19239_ch_T0000645;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=exon:NA19239_ch_T0000645:0;Name=LOC101928626;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26911478	26911614	.	-	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;transcript_id=NA19239_ch_T0000645;gene_id=NA19239_ch_G0000256;Parent=NA19239_ch_T0000645;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=intron:NA19239_ch_T0000645:0;Name=LOC101928626;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26911615	26911881	.	-	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;transcript_id=NA19239_ch_T0000645;gene_id=NA19239_ch_G0000256;Parent=NA19239_ch_T0000645;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=exon:NA19239_ch_T0000645:1;Name=LOC101928626;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26911882	26912576	.	-	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;transcript_id=NA19239_ch_T0000645;gene_id=NA19239_ch_G0000256;Parent=NA19239_ch_T0000645;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=intron:NA19239_ch_T0000645:1;Name=LOC101928626;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26912577	26912667	.	-	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;transcript_id=NA19239_ch_T0000645;gene_id=NA19239_ch_G0000256;Parent=NA19239_ch_T0000645;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=exon:NA19239_ch_T0000645:2;Name=LOC101928626;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	26920548	26931535	.	+	.	source_gene_common_name=LOC107987240;source_gene=hg002_chrY_paternal_616;gene_id=NA19239_ch_G0000257;gene_biotype=lncRNA;gene_name=LOC107987240;gene_sources=liftoff;ID=NA19239_ch_G0000257;Name=LOC107987240
NA19239_chrY	CAT	transcript	26920548	26931535	1000	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;transcript_id=NA19239_ch_T0000646;gene_id=NA19239_ch_G0000257;Parent=NA19239_ch_G0000257;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=NA19239_ch_T0000646;Name=LOC107987240
NA19239_chrY	CAT	exon	26920548	26920779	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;transcript_id=NA19239_ch_T0000646;gene_id=NA19239_ch_G0000257;Parent=NA19239_ch_T0000646;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=exon:NA19239_ch_T0000646:0;Name=LOC107987240;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26920780	26930561	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;transcript_id=NA19239_ch_T0000646;gene_id=NA19239_ch_G0000257;Parent=NA19239_ch_T0000646;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=intron:NA19239_ch_T0000646:0;Name=LOC107987240;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26930562	26930668	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;transcript_id=NA19239_ch_T0000646;gene_id=NA19239_ch_G0000257;Parent=NA19239_ch_T0000646;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=exon:NA19239_ch_T0000646:1;Name=LOC107987240;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26930669	26930877	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;transcript_id=NA19239_ch_T0000646;gene_id=NA19239_ch_G0000257;Parent=NA19239_ch_T0000646;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=intron:NA19239_ch_T0000646:1;Name=LOC107987240;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26930878	26931535	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;transcript_id=NA19239_ch_T0000646;gene_id=NA19239_ch_G0000257;Parent=NA19239_ch_T0000646;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=exon:NA19239_ch_T0000646:2;Name=LOC107987240;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	26950390	26966810	.	-	.	source_gene_common_name=SEPTIN14P23;source_gene=hg002_chrY_paternal_617;gene_id=NA19239_ch_G0000258;gene_biotype=transcribed_pseudogene;gene_name=SEPTIN14P23;gene_sources=liftoff;ID=NA19239_ch_G0000258;Name=SEPTIN14P23
NA19239_chrY	CAT	transcript	26950390	26966810	1000	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=NA19239_ch_T0000647;gene_id=NA19239_ch_G0000258;Parent=NA19239_ch_G0000258;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=NA19239_ch_T0000647;Name=SEPTIN14P23
NA19239_chrY	CAT	exon	26950390	26950968	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=NA19239_ch_T0000647;gene_id=NA19239_ch_G0000258;Parent=NA19239_ch_T0000647;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=exon:NA19239_ch_T0000647:0;Name=SEPTIN14P23;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26950969	26959006	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=NA19239_ch_T0000647;gene_id=NA19239_ch_G0000258;Parent=NA19239_ch_T0000647;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=intron:NA19239_ch_T0000647:0;Name=SEPTIN14P23;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26959007	26959175	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=NA19239_ch_T0000647;gene_id=NA19239_ch_G0000258;Parent=NA19239_ch_T0000647;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=exon:NA19239_ch_T0000647:1;Name=SEPTIN14P23;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	26959176	26966716	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=NA19239_ch_T0000647;gene_id=NA19239_ch_G0000258;Parent=NA19239_ch_T0000647;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=intron:NA19239_ch_T0000647:1;Name=SEPTIN14P23;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	26966717	26966810	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=NA19239_ch_T0000647;gene_id=NA19239_ch_G0000258;Parent=NA19239_ch_T0000647;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=exon:NA19239_ch_T0000647:2;Name=SEPTIN14P23;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	27027404	27032269	.	+	.	source_gene_common_name=GOLGA2P2Y;source_gene=hg002_chrY_paternal_550;gene_id=NA19239_ch_G0000259;gene_biotype=transcribed_pseudogene;gene_name=GOLGA2P2Y;gene_sources=liftoff;ID=NA19239_ch_G0000259;Name=GOLGA2P2Y
NA19239_chrY	CAT	transcript	27027404	27032269	1000	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA19239_ch_T0000648;gene_id=NA19239_ch_G0000259;Parent=NA19239_ch_G0000259;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=NA19239_ch_T0000648;Name=GOLGA2P2Y
NA19239_chrY	CAT	exon	27027404	27027446	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA19239_ch_T0000648;gene_id=NA19239_ch_G0000259;Parent=NA19239_ch_T0000648;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:NA19239_ch_T0000648:0;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	27027447	27027632	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA19239_ch_T0000648;gene_id=NA19239_ch_G0000259;Parent=NA19239_ch_T0000648;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:NA19239_ch_T0000648:0;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	27027633	27027711	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA19239_ch_T0000648;gene_id=NA19239_ch_G0000259;Parent=NA19239_ch_T0000648;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:NA19239_ch_T0000648:1;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	27027712	27028831	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA19239_ch_T0000648;gene_id=NA19239_ch_G0000259;Parent=NA19239_ch_T0000648;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:NA19239_ch_T0000648:1;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	27028832	27029183	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA19239_ch_T0000648;gene_id=NA19239_ch_G0000259;Parent=NA19239_ch_T0000648;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:NA19239_ch_T0000648:2;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	27029184	27029479	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA19239_ch_T0000648;gene_id=NA19239_ch_G0000259;Parent=NA19239_ch_T0000648;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:NA19239_ch_T0000648:2;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	27029480	27029537	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA19239_ch_T0000648;gene_id=NA19239_ch_G0000259;Parent=NA19239_ch_T0000648;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:NA19239_ch_T0000648:3;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	27029538	27030893	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA19239_ch_T0000648;gene_id=NA19239_ch_G0000259;Parent=NA19239_ch_T0000648;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:NA19239_ch_T0000648:3;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	27030894	27030968	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA19239_ch_T0000648;gene_id=NA19239_ch_G0000259;Parent=NA19239_ch_T0000648;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:NA19239_ch_T0000648:4;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	27030969	27031388	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA19239_ch_T0000648;gene_id=NA19239_ch_G0000259;Parent=NA19239_ch_T0000648;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:NA19239_ch_T0000648:4;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	27031389	27031477	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA19239_ch_T0000648;gene_id=NA19239_ch_G0000259;Parent=NA19239_ch_T0000648;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:NA19239_ch_T0000648:5;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	27031478	27031732	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA19239_ch_T0000648;gene_id=NA19239_ch_G0000259;Parent=NA19239_ch_T0000648;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:NA19239_ch_T0000648:5;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	27031733	27031921	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA19239_ch_T0000648;gene_id=NA19239_ch_G0000259;Parent=NA19239_ch_T0000648;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:NA19239_ch_T0000648:6;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	27031922	27032010	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA19239_ch_T0000648;gene_id=NA19239_ch_G0000259;Parent=NA19239_ch_T0000648;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:NA19239_ch_T0000648:6;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	27032011	27032103	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA19239_ch_T0000648;gene_id=NA19239_ch_G0000259;Parent=NA19239_ch_T0000648;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:NA19239_ch_T0000648:7;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	27032104	27032185	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA19239_ch_T0000648;gene_id=NA19239_ch_G0000259;Parent=NA19239_ch_T0000648;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:NA19239_ch_T0000648:7;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	27032186	27032269	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA19239_ch_T0000648;gene_id=NA19239_ch_G0000259;Parent=NA19239_ch_T0000648;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:NA19239_ch_T0000648:8;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	27034268	27035798	.	-	.	source_gene_common_name=LOC102724034;source_gene=hg002_chrY_paternal_552;gene_id=NA19239_ch_G0000260;gene_biotype=lncRNA;gene_name=LOC102724034;gene_sources=liftoff;ID=NA19239_ch_G0000260;Name=LOC102724034
NA19239_chrY	CAT	transcript	27034268	27035798	1000	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;transcript_id=NA19239_ch_T0000649;gene_id=NA19239_ch_G0000260;Parent=NA19239_ch_G0000260;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=NA19239_ch_T0000649;Name=LOC102724034
NA19239_chrY	CAT	exon	27034268	27034691	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;transcript_id=NA19239_ch_T0000649;gene_id=NA19239_ch_G0000260;Parent=NA19239_ch_T0000649;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=exon:NA19239_ch_T0000649:0;Name=LOC102724034;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	27034692	27034959	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;transcript_id=NA19239_ch_T0000649;gene_id=NA19239_ch_G0000260;Parent=NA19239_ch_T0000649;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=intron:NA19239_ch_T0000649:0;Name=LOC102724034;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	27034960	27035084	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;transcript_id=NA19239_ch_T0000649;gene_id=NA19239_ch_G0000260;Parent=NA19239_ch_T0000649;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=exon:NA19239_ch_T0000649:1;Name=LOC102724034;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	27035085	27035772	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;transcript_id=NA19239_ch_T0000649;gene_id=NA19239_ch_G0000260;Parent=NA19239_ch_T0000649;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=intron:NA19239_ch_T0000649:1;Name=LOC102724034;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	27035773	27035798	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;transcript_id=NA19239_ch_T0000649;gene_id=NA19239_ch_G0000260;Parent=NA19239_ch_T0000649;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=exon:NA19239_ch_T0000649:2;Name=LOC102724034;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	27055003	27058800	.	+	.	source_gene_common_name=CSPG4P1Y;source_gene=hg002_chrY_paternal_556;gene_id=NA19239_ch_G0000261;gene_biotype=transcribed_pseudogene;gene_name=CSPG4P1Y;gene_sources=liftoff;ID=NA19239_ch_G0000261;Name=CSPG4P1Y
NA19239_chrY	CAT	transcript	27055003	27058800	1000	+	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=NA19239_ch_T0000650;gene_id=NA19239_ch_G0000261;Parent=NA19239_ch_G0000261;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=NA19239_ch_T0000650;Name=CSPG4P1Y
NA19239_chrY	CAT	exon	27055003	27055725	.	+	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=NA19239_ch_T0000650;gene_id=NA19239_ch_G0000261;Parent=NA19239_ch_T0000650;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=exon:NA19239_ch_T0000650:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	27055726	27058728	.	+	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=NA19239_ch_T0000650;gene_id=NA19239_ch_G0000261;Parent=NA19239_ch_T0000650;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=intron:NA19239_ch_T0000650:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	27058729	27058800	.	+	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=NA19239_ch_T0000650;gene_id=NA19239_ch_G0000261;Parent=NA19239_ch_T0000650;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=exon:NA19239_ch_T0000650:1;Name=CSPG4P1Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	27194217	27197616	.	+	.	source_gene_common_name=CDY1B;source_gene=hg002_chrY_paternal_565;gene_id=NA19239_ch_G0000262;gene_biotype=protein_coding;gene_name=CDY1B;gene_sources=liftoff;ID=NA19239_ch_G0000262;Name=CDY1B
NA19239_chrY	CAT	transcript	27194217	27196443	100	+	.	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=NA19239_ch_T0000651;gene_id=NA19239_ch_G0000262;Parent=NA19239_ch_G0000262;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=NA19239_ch_T0000651;Name=CDY1B
NA19239_chrY	CAT	exon	27194217	27196443	.	+	.	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=NA19239_ch_T0000651;gene_id=NA19239_ch_G0000262;Parent=NA19239_ch_T0000651;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=exon:NA19239_ch_T0000651:0;Name=CDY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	27194548	27196170	.	+	0	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=NA19239_ch_T0000651;gene_id=NA19239_ch_G0000262;Parent=NA19239_ch_T0000651;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=CDS:NA19239_ch_T0000651:0;Name=CDY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	27194548	27194550	.	+	0	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=NA19239_ch_T0000651;gene_id=NA19239_ch_G0000262;Parent=NA19239_ch_T0000651;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=start_codon:NA19239_ch_T0000651;Name=CDY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	27196168	27196170	.	+	0	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=NA19239_ch_T0000651;gene_id=NA19239_ch_G0000262;Parent=NA19239_ch_T0000651;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=stop_codon:NA19239_ch_T0000651;Name=CDY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	27194222	27197007	100	+	.	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=NA19239_ch_T0000652;gene_id=NA19239_ch_G0000262;Parent=NA19239_ch_G0000262;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=NA19239_ch_T0000652;Name=CDY1B
NA19239_chrY	CAT	exon	27194222	27196139	.	+	.	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=NA19239_ch_T0000652;gene_id=NA19239_ch_G0000262;Parent=NA19239_ch_T0000652;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=exon:NA19239_ch_T0000652:0;Name=CDY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	27194548	27196139	.	+	0	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=NA19239_ch_T0000652;gene_id=NA19239_ch_G0000262;Parent=NA19239_ch_T0000652;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=CDS:NA19239_ch_T0000652:0;Name=CDY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	27194548	27194550	.	+	0	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=NA19239_ch_T0000652;gene_id=NA19239_ch_G0000262;Parent=NA19239_ch_T0000652;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=start_codon:NA19239_ch_T0000652;Name=CDY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	27196140	27196559	.	+	.	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=NA19239_ch_T0000652;gene_id=NA19239_ch_G0000262;Parent=NA19239_ch_T0000652;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=intron:NA19239_ch_T0000652:0;Name=CDY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	27196560	27197007	.	+	.	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=NA19239_ch_T0000652;gene_id=NA19239_ch_G0000262;Parent=NA19239_ch_T0000652;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=exon:NA19239_ch_T0000652:1;Name=CDY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	27196560	27196632	.	+	1	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=NA19239_ch_T0000652;gene_id=NA19239_ch_G0000262;Parent=NA19239_ch_T0000652;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=CDS:NA19239_ch_T0000652:1;Name=CDY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	27196630	27196632	.	+	0	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=NA19239_ch_T0000652;gene_id=NA19239_ch_G0000262;Parent=NA19239_ch_T0000652;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=stop_codon:NA19239_ch_T0000652;Name=CDY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	27194222	27197616	1000	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=NA19239_ch_T0000653;gene_id=NA19239_ch_G0000262;Parent=NA19239_ch_G0000262;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=NA19239_ch_T0000653;Name=CDY1B
NA19239_chrY	CAT	exon	27194222	27196139	.	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=NA19239_ch_T0000653;gene_id=NA19239_ch_G0000262;Parent=NA19239_ch_T0000653;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=exon:NA19239_ch_T0000653:0;Name=CDY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	27196140	27196559	.	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=NA19239_ch_T0000653;gene_id=NA19239_ch_G0000262;Parent=NA19239_ch_T0000653;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=intron:NA19239_ch_T0000653:0;Name=CDY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	27196560	27196759	.	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=NA19239_ch_T0000653;gene_id=NA19239_ch_G0000262;Parent=NA19239_ch_T0000653;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=exon:NA19239_ch_T0000653:1;Name=CDY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	27196760	27197534	.	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=NA19239_ch_T0000653;gene_id=NA19239_ch_G0000262;Parent=NA19239_ch_T0000653;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=intron:NA19239_ch_T0000653:1;Name=CDY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	27197535	27197616	.	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=NA19239_ch_T0000653;gene_id=NA19239_ch_G0000262;Parent=NA19239_ch_T0000653;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=exon:NA19239_ch_T0000653:2;Name=CDY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	27194230	27197007	100	+	.	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=NA19239_ch_T0000654;gene_id=NA19239_ch_G0000262;Parent=NA19239_ch_G0000262;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=NA19239_ch_T0000654;Name=CDY1B
NA19239_chrY	CAT	exon	27194230	27195939	.	+	.	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=NA19239_ch_T0000654;gene_id=NA19239_ch_G0000262;Parent=NA19239_ch_T0000654;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=exon:NA19239_ch_T0000654:0;Name=CDY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	27194548	27195939	.	+	0	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=NA19239_ch_T0000654;gene_id=NA19239_ch_G0000262;Parent=NA19239_ch_T0000654;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=CDS:NA19239_ch_T0000654:0;Name=CDY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	27194548	27194550	.	+	0	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=NA19239_ch_T0000654;gene_id=NA19239_ch_G0000262;Parent=NA19239_ch_T0000654;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=start_codon:NA19239_ch_T0000654;Name=CDY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	27195940	27196559	.	+	.	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=NA19239_ch_T0000654;gene_id=NA19239_ch_G0000262;Parent=NA19239_ch_T0000654;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=intron:NA19239_ch_T0000654:0;Name=CDY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	27196560	27197007	.	+	.	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=NA19239_ch_T0000654;gene_id=NA19239_ch_G0000262;Parent=NA19239_ch_T0000654;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=exon:NA19239_ch_T0000654:1;Name=CDY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	27196560	27196580	.	+	0	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=NA19239_ch_T0000654;gene_id=NA19239_ch_G0000262;Parent=NA19239_ch_T0000654;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=CDS:NA19239_ch_T0000654:1;Name=CDY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	27196578	27196580	.	+	0	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=NA19239_ch_T0000654;gene_id=NA19239_ch_G0000262;Parent=NA19239_ch_T0000654;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=stop_codon:NA19239_ch_T0000654;Name=CDY1B;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	27300597	27305492	.	+	.	source_gene_common_name=TTTY3B;source_gene=hg002_chrY_paternal_645;alternative_source_transcripts=hg002_chrY_paternal_645.1;gene_id=NA19239_ch_G0000263;gene_biotype=lncRNA;gene_name=TTTY3B;gene_sources=liftoff;ID=NA19239_ch_G0000263;Name=TTTY3B
NA19239_chrY	CAT	transcript	27300597	27305492	1000	+	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=NA19239_ch_T0000655;gene_id=NA19239_ch_G0000263;Parent=NA19239_ch_G0000263;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=NA19239_ch_T0000655;Name=TTTY3B
NA19239_chrY	CAT	exon	27300597	27300700	.	+	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=NA19239_ch_T0000655;gene_id=NA19239_ch_G0000263;Parent=NA19239_ch_T0000655;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=exon:NA19239_ch_T0000655:0;Name=TTTY3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	27300701	27302898	.	+	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=NA19239_ch_T0000655;gene_id=NA19239_ch_G0000263;Parent=NA19239_ch_T0000655;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=intron:NA19239_ch_T0000655:0;Name=TTTY3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	27302899	27303033	.	+	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=NA19239_ch_T0000655;gene_id=NA19239_ch_G0000263;Parent=NA19239_ch_T0000655;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=exon:NA19239_ch_T0000655:1;Name=TTTY3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	27303034	27305387	.	+	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=NA19239_ch_T0000655;gene_id=NA19239_ch_G0000263;Parent=NA19239_ch_T0000655;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=intron:NA19239_ch_T0000655:1;Name=TTTY3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	27305388	27305492	.	+	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=NA19239_ch_T0000655;gene_id=NA19239_ch_G0000263;Parent=NA19239_ch_T0000655;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=exon:NA19239_ch_T0000655:2;Name=TTTY3B;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	27601419	27604543	.	-	.	source_gene_common_name=LOC107987352;source_gene=hg002_chrY_paternal_665;alternative_source_transcripts=hg002_chrY_paternal_665.1;gene_id=NA19239_ch_G0000264;gene_biotype=lncRNA;gene_name=LOC107987352;gene_sources=liftoff;ID=NA19239_ch_G0000264;Name=LOC107987352
NA19239_chrY	CAT	transcript	27601419	27604543	1000	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=NA19239_ch_T0000656;gene_id=NA19239_ch_G0000264;Parent=NA19239_ch_G0000264;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=NA19239_ch_T0000656;Name=LOC107987352
NA19239_chrY	CAT	exon	27601419	27602747	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=NA19239_ch_T0000656;gene_id=NA19239_ch_G0000264;Parent=NA19239_ch_T0000656;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=exon:NA19239_ch_T0000656:0;Name=LOC107987352;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	27602748	27604282	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=NA19239_ch_T0000656;gene_id=NA19239_ch_G0000264;Parent=NA19239_ch_T0000656;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=intron:NA19239_ch_T0000656:0;Name=LOC107987352;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	27604283	27604343	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=NA19239_ch_T0000656;gene_id=NA19239_ch_G0000264;Parent=NA19239_ch_T0000656;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=exon:NA19239_ch_T0000656:1;Name=LOC107987352;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	27604344	27604460	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=NA19239_ch_T0000656;gene_id=NA19239_ch_G0000264;Parent=NA19239_ch_T0000656;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=intron:NA19239_ch_T0000656:1;Name=LOC107987352;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	27604461	27604543	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=NA19239_ch_T0000656;gene_id=NA19239_ch_G0000264;Parent=NA19239_ch_T0000656;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=exon:NA19239_ch_T0000656:2;Name=LOC107987352;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	27765976	27807481	.	-	.	source_gene_common_name=REREP2Y;source_gene=hg002_chrY_paternal_668;alternative_source_transcripts=hg002_chrY_paternal_668.1;gene_id=NA19239_ch_G0000265;gene_biotype=transcribed_pseudogene;gene_name=REREP2Y;gene_sources=liftoff;ID=NA19239_ch_G0000265;Name=REREP2Y
NA19239_chrY	CAT	transcript	27765976	27807481	1000	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=NA19239_ch_T0000657;gene_id=NA19239_ch_G0000265;Parent=NA19239_ch_G0000265;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=NA19239_ch_T0000657;Name=REREP2Y
NA19239_chrY	CAT	exon	27765976	27770566	.	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=NA19239_ch_T0000657;gene_id=NA19239_ch_G0000265;Parent=NA19239_ch_T0000657;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=exon:NA19239_ch_T0000657:0;Name=REREP2Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	27770567	27780182	.	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=NA19239_ch_T0000657;gene_id=NA19239_ch_G0000265;Parent=NA19239_ch_T0000657;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=intron:NA19239_ch_T0000657:0;Name=REREP2Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	27780183	27780255	.	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=NA19239_ch_T0000657;gene_id=NA19239_ch_G0000265;Parent=NA19239_ch_T0000657;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=exon:NA19239_ch_T0000657:1;Name=REREP2Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	27780256	27807078	.	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=NA19239_ch_T0000657;gene_id=NA19239_ch_G0000265;Parent=NA19239_ch_T0000657;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=intron:NA19239_ch_T0000657:1;Name=REREP2Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	27807079	27807481	.	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=NA19239_ch_T0000657;gene_id=NA19239_ch_G0000265;Parent=NA19239_ch_T0000657;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=exon:NA19239_ch_T0000657:2;Name=REREP2Y;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	27819494	27819631	.	+	.	source_gene_common_name=LOC124900507;source_gene=hg002_chrY_paternal_669;alternative_source_transcripts=hg002_chrY_paternal_669.1;gene_id=NA19239_ch_G0000266;gene_biotype=snoRNA;gene_name=LOC124900507;gene_sources=liftoff;ID=NA19239_ch_G0000266;Name=LOC124900507
NA19239_chrY	CAT	transcript	27819494	27819631	1000	+	.	source_transcript=hg002_chrY_paternal_669.1;source_transcript_name=hg002_chrY_paternal_669.1;source_gene=hg002_chrY_paternal_669;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_669;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_669.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_669.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900507;alternative_source_transcripts=hg002_chrY_paternal_669.1;transcript_id=NA19239_ch_T0000658;gene_id=NA19239_ch_G0000266;Parent=NA19239_ch_G0000266;transcript_name=hg002_chrY_paternal_669.1;gene_name=LOC124900507;ID=NA19239_ch_T0000658;Name=LOC124900507
NA19239_chrY	CAT	exon	27819494	27819631	.	+	.	source_transcript=hg002_chrY_paternal_669.1;source_transcript_name=hg002_chrY_paternal_669.1;source_gene=hg002_chrY_paternal_669;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_669;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_669.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_669.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900507;alternative_source_transcripts=hg002_chrY_paternal_669.1;transcript_id=NA19239_ch_T0000658;gene_id=NA19239_ch_G0000266;Parent=NA19239_ch_T0000658;transcript_name=hg002_chrY_paternal_669.1;gene_name=LOC124900507;ID=exon:NA19239_ch_T0000658:0;Name=LOC124900507;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	27973273	27981267	.	-	.	source_gene_common_name=LOC105377244;source_gene=hg002_chrY_paternal_673;alternative_source_transcripts=hg002_chrY_paternal_673.1;gene_id=NA19239_ch_G0000267;gene_biotype=lncRNA;gene_name=LOC105377244;gene_sources=liftoff;ID=NA19239_ch_G0000267;Name=LOC105377244
NA19239_chrY	CAT	transcript	27973273	27981267	1000	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=NA19239_ch_T0000659;gene_id=NA19239_ch_G0000267;Parent=NA19239_ch_G0000267;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=NA19239_ch_T0000659;Name=LOC105377244
NA19239_chrY	CAT	exon	27973273	27977875	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=NA19239_ch_T0000659;gene_id=NA19239_ch_G0000267;Parent=NA19239_ch_T0000659;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=exon:NA19239_ch_T0000659:0;Name=LOC105377244;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	27977876	27978741	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=NA19239_ch_T0000659;gene_id=NA19239_ch_G0000267;Parent=NA19239_ch_T0000659;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=intron:NA19239_ch_T0000659:0;Name=LOC105377244;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	27978742	27978908	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=NA19239_ch_T0000659;gene_id=NA19239_ch_G0000267;Parent=NA19239_ch_T0000659;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=exon:NA19239_ch_T0000659:1;Name=LOC105377244;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	27978909	27981036	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=NA19239_ch_T0000659;gene_id=NA19239_ch_G0000267;Parent=NA19239_ch_T0000659;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=intron:NA19239_ch_T0000659:1;Name=LOC105377244;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	27981037	27981267	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=NA19239_ch_T0000659;gene_id=NA19239_ch_G0000267;Parent=NA19239_ch_T0000659;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=exon:NA19239_ch_T0000659:2;Name=LOC105377244;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	27996780	28012957	.	+	.	source_gene_common_name=LOC102723869;source_gene=hg002_chrY_paternal_675;alternative_source_transcripts=hg002_chrY_paternal_675.1;gene_id=NA19239_ch_G0000268;gene_biotype=lncRNA;gene_name=LOC102723869;gene_sources=liftoff;ID=NA19239_ch_G0000268;Name=LOC102723869
NA19239_chrY	CAT	transcript	27996780	28012957	1000	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=NA19239_ch_T0000660;gene_id=NA19239_ch_G0000268;Parent=NA19239_ch_G0000268;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=NA19239_ch_T0000660;Name=LOC102723869
NA19239_chrY	CAT	exon	27996780	27997047	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=NA19239_ch_T0000660;gene_id=NA19239_ch_G0000268;Parent=NA19239_ch_T0000660;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=exon:NA19239_ch_T0000660:0;Name=LOC102723869;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	27997048	28009087	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=NA19239_ch_T0000660;gene_id=NA19239_ch_G0000268;Parent=NA19239_ch_T0000660;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=intron:NA19239_ch_T0000660:0;Name=LOC102723869;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	28009088	28009116	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=NA19239_ch_T0000660;gene_id=NA19239_ch_G0000268;Parent=NA19239_ch_T0000660;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=exon:NA19239_ch_T0000660:1;Name=LOC102723869;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	28009117	28009210	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=NA19239_ch_T0000660;gene_id=NA19239_ch_G0000268;Parent=NA19239_ch_T0000660;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=intron:NA19239_ch_T0000660:1;Name=LOC102723869;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	28009211	28009283	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=NA19239_ch_T0000660;gene_id=NA19239_ch_G0000268;Parent=NA19239_ch_T0000660;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=exon:NA19239_ch_T0000660:2;Name=LOC102723869;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	28009284	28012926	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=NA19239_ch_T0000660;gene_id=NA19239_ch_G0000268;Parent=NA19239_ch_T0000660;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=intron:NA19239_ch_T0000660:2;Name=LOC102723869;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	28012927	28012957	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=NA19239_ch_T0000660;gene_id=NA19239_ch_G0000268;Parent=NA19239_ch_T0000660;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=exon:NA19239_ch_T0000660:3;Name=LOC102723869;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	47160581	47175290	.	+	.	source_gene_common_name=SPRY3;source_gene=hg002_chrY_paternal_683;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;gene_id=NA19239_ch_G0000269;gene_biotype=protein_coding;gene_name=SPRY3;gene_sources=liftoff,augTM;ID=NA19239_ch_G0000269;Name=SPRY3
NA19239_chrY	CAT	transcript	47160581	47175290	100	+	.	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000661;gene_id=NA19239_ch_G0000269;Parent=NA19239_ch_G0000269;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=NA19239_ch_T0000661;Name=SPRY3
NA19239_chrY	CAT	exon	47160581	47160923	.	+	.	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000661;gene_id=NA19239_ch_G0000269;Parent=NA19239_ch_T0000661;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=exon:NA19239_ch_T0000661:0;Name=SPRY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47160924	47166559	.	+	.	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000661;gene_id=NA19239_ch_G0000269;Parent=NA19239_ch_T0000661;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=intron:NA19239_ch_T0000661:0;Name=SPRY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47166560	47175290	.	+	.	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000661;gene_id=NA19239_ch_G0000269;Parent=NA19239_ch_T0000661;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=exon:NA19239_ch_T0000661:1;Name=SPRY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47166666	47167532	.	+	0	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000661;gene_id=NA19239_ch_G0000269;Parent=NA19239_ch_T0000661;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=CDS:NA19239_ch_T0000661:0;Name=SPRY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	47166666	47166668	.	+	0	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000661;gene_id=NA19239_ch_G0000269;Parent=NA19239_ch_T0000661;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=start_codon:NA19239_ch_T0000661;Name=SPRY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	47167530	47167532	.	+	0	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000661;gene_id=NA19239_ch_G0000269;Parent=NA19239_ch_T0000661;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=stop_codon:NA19239_ch_T0000661;Name=SPRY3;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	47276986	47339419	.	+	.	source_gene_common_name=VAMP7;source_gene=hg002_chrY_paternal_687;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;gene_id=NA19239_ch_G0000270;gene_biotype=protein_coding;gene_name=VAMP7;gene_sources=liftoff,augTM;ID=NA19239_ch_G0000270;Name=VAMP7
NA19239_chrY	CAT	transcript	47276986	47339419	100	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000662;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_G0000270;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=NA19239_ch_T0000662;Name=VAMP7
NA19239_chrY	CAT	exon	47276986	47277089	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000662;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000662;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19239_ch_T0000662:0;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47277090	47285096	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000662;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000662;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19239_ch_T0000662:0;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47285097	47285186	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000662;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000662;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19239_ch_T0000662:1;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47285106	47285186	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000662;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000662;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19239_ch_T0000662:0;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	47285106	47285108	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000662;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000662;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:NA19239_ch_T0000662;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47285187	47293759	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000662;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000662;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19239_ch_T0000662:1;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47293760	47293897	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000662;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000662;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19239_ch_T0000662:2;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47293760	47293897	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000662;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000662;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19239_ch_T0000662:1;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47293898	47296144	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000662;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000662;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19239_ch_T0000662:2;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47296145	47296235	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000662;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000662;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19239_ch_T0000662:3;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47296145	47296235	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000662;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000662;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19239_ch_T0000662:2;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47296236	47315462	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000662;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000662;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19239_ch_T0000662:3;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47315463	47315530	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000662;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000662;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19239_ch_T0000662:4;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47315463	47315530	.	+	2	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000662;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000662;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19239_ch_T0000662:3;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47315531	47335354	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000662;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000662;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19239_ch_T0000662:4;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47335355	47335447	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000662;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000662;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19239_ch_T0000662:5;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47335355	47335447	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000662;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000662;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19239_ch_T0000662:4;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47335448	47337532	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000662;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000662;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19239_ch_T0000662:5;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47337533	47339419	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000662;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000662;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19239_ch_T0000662:6;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47337533	47337601	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000662;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000662;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19239_ch_T0000662:5;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	47337599	47337601	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000662;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000662;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:NA19239_ch_T0000662;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	47276986	47339419	100	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000663;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_G0000270;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=NA19239_ch_T0000663;Name=VAMP7
NA19239_chrY	CAT	exon	47276986	47277089	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000663;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000663;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19239_ch_T0000663:0;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47277090	47285096	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000663;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000663;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19239_ch_T0000663:0;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47285097	47285251	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000663;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000663;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19239_ch_T0000663:1;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47285106	47285251	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000663;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000663;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19239_ch_T0000663:0;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	47285106	47285108	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000663;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000663;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:NA19239_ch_T0000663;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47285252	47291270	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000663;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000663;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19239_ch_T0000663:1;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47291271	47291328	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000663;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000663;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19239_ch_T0000663:2;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47291271	47291328	.	+	1	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000663;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000663;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19239_ch_T0000663:1;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47291329	47293759	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000663;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000663;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19239_ch_T0000663:2;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47293760	47293897	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000663;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000663;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19239_ch_T0000663:3;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47293760	47293897	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000663;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000663;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19239_ch_T0000663:2;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47293898	47296144	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000663;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000663;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19239_ch_T0000663:3;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47296145	47296235	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000663;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000663;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19239_ch_T0000663:4;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47296145	47296235	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000663;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000663;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19239_ch_T0000663:3;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47296236	47335354	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000663;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000663;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19239_ch_T0000663:4;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47335355	47335447	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000663;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000663;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19239_ch_T0000663:5;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47335355	47335447	.	+	2	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000663;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000663;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19239_ch_T0000663:4;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47335448	47337532	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000663;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000663;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19239_ch_T0000663:5;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47337533	47339419	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000663;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000663;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19239_ch_T0000663:6;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47337533	47337789	.	+	2	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000663;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000663;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19239_ch_T0000663:5;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	47337787	47337789	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000663;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000663;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:NA19239_ch_T0000663;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	47276986	47339419	100	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000664;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_G0000270;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=NA19239_ch_T0000664;Name=VAMP7
NA19239_chrY	CAT	exon	47276986	47277089	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000664;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000664;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19239_ch_T0000664:0;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47277090	47285096	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000664;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000664;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19239_ch_T0000664:0;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47285097	47285251	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000664;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000664;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19239_ch_T0000664:1;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47285106	47285251	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000664;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000664;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19239_ch_T0000664:0;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	47285106	47285108	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000664;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000664;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:NA19239_ch_T0000664;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47285252	47291270	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000664;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000664;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19239_ch_T0000664:1;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47291271	47291328	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000664;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000664;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19239_ch_T0000664:2;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47291271	47291328	.	+	1	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000664;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000664;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19239_ch_T0000664:1;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47291329	47293759	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000664;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000664;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19239_ch_T0000664:2;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47293760	47293897	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000664;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000664;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19239_ch_T0000664:3;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47293760	47293897	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000664;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000664;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19239_ch_T0000664:2;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47293898	47296144	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000664;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000664;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19239_ch_T0000664:3;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47296145	47296235	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000664;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000664;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19239_ch_T0000664:4;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47296145	47296235	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000664;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000664;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19239_ch_T0000664:3;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47296236	47315462	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000664;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000664;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19239_ch_T0000664:4;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47315463	47315530	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000664;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000664;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19239_ch_T0000664:5;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47315463	47315530	.	+	2	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000664;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000664;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19239_ch_T0000664:4;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47315531	47335354	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000664;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000664;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19239_ch_T0000664:5;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47335355	47335447	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000664;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000664;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19239_ch_T0000664:6;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47335355	47335447	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000664;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000664;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19239_ch_T0000664:5;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47335448	47337532	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000664;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000664;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19239_ch_T0000664:6;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47337533	47339419	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000664;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000664;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19239_ch_T0000664:7;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47337533	47337601	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000664;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000664;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19239_ch_T0000664:6;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	47337599	47337601	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000664;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000664;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:NA19239_ch_T0000664;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	47276986	47339419	100	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000665;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_G0000270;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=NA19239_ch_T0000665;Name=VAMP7
NA19239_chrY	CAT	exon	47276986	47277089	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000665;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000665;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19239_ch_T0000665:0;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47277090	47285096	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000665;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000665;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19239_ch_T0000665:0;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47285097	47285272	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000665;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000665;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19239_ch_T0000665:1;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47285268	47285272	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000665;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000665;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19239_ch_T0000665:0;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	47285268	47285270	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000665;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000665;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:NA19239_ch_T0000665;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47285273	47291270	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000665;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000665;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19239_ch_T0000665:1;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47291271	47291328	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000665;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000665;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19239_ch_T0000665:2;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47291271	47291328	.	+	1	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000665;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000665;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19239_ch_T0000665:1;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47291329	47293759	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000665;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000665;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19239_ch_T0000665:2;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47293760	47293897	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000665;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000665;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19239_ch_T0000665:3;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47293760	47293897	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000665;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000665;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19239_ch_T0000665:2;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47293898	47296144	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000665;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000665;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19239_ch_T0000665:3;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47296145	47296235	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000665;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000665;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19239_ch_T0000665:4;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47296145	47296235	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000665;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000665;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19239_ch_T0000665:3;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47296236	47335354	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000665;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000665;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19239_ch_T0000665:4;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47335355	47335447	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000665;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000665;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19239_ch_T0000665:5;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47335355	47335447	.	+	2	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000665;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000665;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19239_ch_T0000665:4;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47335448	47337532	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000665;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000665;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19239_ch_T0000665:5;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47337533	47339419	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000665;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000665;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19239_ch_T0000665:6;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47337533	47337789	.	+	2	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000665;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000665;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19239_ch_T0000665:5;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	47337787	47337789	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000665;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000665;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:NA19239_ch_T0000665;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	47276986	47339419	100	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000666;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_G0000270;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=NA19239_ch_T0000666;Name=VAMP7
NA19239_chrY	CAT	exon	47276986	47277089	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000666;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000666;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19239_ch_T0000666:0;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47277090	47285096	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000666;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000666;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19239_ch_T0000666:0;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47285097	47285272	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000666;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000666;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19239_ch_T0000666:1;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47285268	47285272	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000666;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000666;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19239_ch_T0000666:0;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	47285268	47285270	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000666;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000666;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:NA19239_ch_T0000666;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47285273	47291270	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000666;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000666;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19239_ch_T0000666:1;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47291271	47291328	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000666;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000666;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19239_ch_T0000666:2;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47291271	47291328	.	+	1	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000666;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000666;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19239_ch_T0000666:1;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47291329	47293759	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000666;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000666;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19239_ch_T0000666:2;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47293760	47293897	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000666;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000666;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19239_ch_T0000666:3;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47293760	47293897	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000666;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000666;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19239_ch_T0000666:2;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47293898	47296144	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000666;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000666;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19239_ch_T0000666:3;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47296145	47296235	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000666;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000666;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19239_ch_T0000666:4;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47296145	47296235	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000666;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000666;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19239_ch_T0000666:3;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47296236	47315462	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000666;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000666;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19239_ch_T0000666:4;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47315463	47315530	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000666;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000666;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19239_ch_T0000666:5;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47315463	47315530	.	+	2	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000666;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000666;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19239_ch_T0000666:4;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47315531	47335354	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000666;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000666;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19239_ch_T0000666:5;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47335355	47335447	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000666;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000666;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19239_ch_T0000666:6;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47335355	47335447	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000666;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000666;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19239_ch_T0000666:5;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47335448	47337532	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000666;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000666;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19239_ch_T0000666:6;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47337533	47339419	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000666;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000666;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19239_ch_T0000666:7;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47337533	47337601	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000666;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000666;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19239_ch_T0000666:6;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	47337599	47337601	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000666;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000666;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:NA19239_ch_T0000666;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	47276986	47339419	1000	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000667;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_G0000270;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=NA19239_ch_T0000667;Name=VAMP7
NA19239_chrY	CAT	exon	47276986	47277089	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000667;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000667;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:NA19239_ch_T0000667:0;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47277090	47285096	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000667;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000667;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:NA19239_ch_T0000667:0;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47285097	47285251	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000667;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000667;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:NA19239_ch_T0000667:1;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47285252	47293759	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000667;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000667;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:NA19239_ch_T0000667:1;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47293760	47293897	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000667;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000667;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:NA19239_ch_T0000667:2;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47293898	47296144	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000667;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000667;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:NA19239_ch_T0000667:2;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47296145	47296235	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000667;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000667;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:NA19239_ch_T0000667:3;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47296236	47315462	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000667;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000667;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:NA19239_ch_T0000667:3;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47315463	47315530	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000667;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000667;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:NA19239_ch_T0000667:4;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47315531	47335354	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000667;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000667;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:NA19239_ch_T0000667:4;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47335355	47335447	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000667;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000667;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:NA19239_ch_T0000667:5;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47335448	47337532	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000667;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000667;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:NA19239_ch_T0000667:5;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47337533	47339419	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000667;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000667;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:NA19239_ch_T0000667:6;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	47276986	47339419	1000	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000668;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_G0000270;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=NA19239_ch_T0000668;Name=VAMP7
NA19239_chrY	CAT	exon	47276986	47277089	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000668;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000668;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:NA19239_ch_T0000668:0;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47277090	47285096	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000668;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000668;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:NA19239_ch_T0000668:0;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47285097	47285186	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000668;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000668;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:NA19239_ch_T0000668:1;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47285187	47291270	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000668;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000668;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:NA19239_ch_T0000668:1;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47291271	47291328	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000668;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000668;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:NA19239_ch_T0000668:2;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47291329	47293759	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000668;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000668;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:NA19239_ch_T0000668:2;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47293760	47293897	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000668;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000668;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:NA19239_ch_T0000668:3;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47293898	47296144	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000668;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000668;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:NA19239_ch_T0000668:3;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47296145	47296235	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000668;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000668;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:NA19239_ch_T0000668:4;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47296236	47315462	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000668;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000668;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:NA19239_ch_T0000668:4;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47315463	47315530	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000668;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000668;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:NA19239_ch_T0000668:5;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47315531	47335354	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000668;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000668;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:NA19239_ch_T0000668:5;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47335355	47335447	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000668;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000668;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:NA19239_ch_T0000668:6;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47335448	47337532	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000668;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000668;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:NA19239_ch_T0000668:6;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47337533	47339419	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000668;gene_id=NA19239_ch_G0000270;Parent=NA19239_ch_T0000668;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:NA19239_ch_T0000668:7;Name=VAMP7;rna_support=False;reference_support=False
NA19239_chrY	CAT	gene	47393189	47406437	.	+	.	source_gene_common_name=IL9R;source_gene=hg002_chrY_paternal_691;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;gene_id=NA19239_ch_G0000271;gene_biotype=protein_coding;gene_name=IL9R;gene_sources=liftoff,augTM;ID=NA19239_ch_G0000271;Name=IL9R
NA19239_chrY	CAT	transcript	47393189	47406437	100	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000669;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_G0000271;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=NA19239_ch_T0000669;Name=IL9R
NA19239_chrY	CAT	exon	47393189	47393424	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000669;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000669:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47393381	47393424	.	+	0	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000669;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000669:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	47393381	47393383	.	+	0	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000669;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:NA19239_ch_T0000669;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47393425	47397046	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000669;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000669:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47397047	47397147	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000669;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000669:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47397047	47397147	.	+	1	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000669;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000669:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47397148	47398547	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000669;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000669:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47398548	47398661	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000669;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000669:2;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47398548	47398661	.	+	2	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000669;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000669:2;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47398662	47399090	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000669;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000669:2;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47399091	47399202	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000669;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000669:3;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47399091	47399202	.	+	2	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000669;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000669:3;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47399203	47399318	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000669;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000669:3;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47399319	47399497	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000669;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000669:4;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47399319	47399497	.	+	1	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000669;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000669:4;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47399498	47400061	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000669;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000669:4;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47400062	47400207	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000669;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000669:5;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47400062	47400207	.	+	2	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000669;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000669:5;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47400208	47400922	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000669;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000669:5;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47400923	47401121	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000669;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000669:6;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47400923	47401121	.	+	0	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000669;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000669:6;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47401122	47401724	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000669;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000669:6;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47401725	47401830	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000669;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000669:7;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47401725	47401830	.	+	2	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000669;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000669:7;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47401831	47405438	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000669;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000669:7;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47405439	47406437	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000669;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000669:8;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47405439	47405475	.	+	1	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000669;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000669:8;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	47405473	47405475	.	+	0	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000669;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:NA19239_ch_T0000669;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	47393246	47406437	100	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000670;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_G0000271;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=NA19239_ch_T0000670;Name=IL9R
NA19239_chrY	CAT	exon	47393246	47393424	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000670;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000670:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47393381	47393424	.	+	0	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000670;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000670:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	47393381	47393383	.	+	0	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000670;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:NA19239_ch_T0000670;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47393425	47397046	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000670;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000670:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47397047	47397147	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000670;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000670:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47397047	47397147	.	+	1	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000670;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000670:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47397148	47398523	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000670;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000670:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47398524	47398661	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000670;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000670:2;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47398524	47398661	.	+	2	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000670;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000670:2;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47398662	47399090	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000670;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000670:2;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47399091	47399202	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000670;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000670:3;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47399091	47399202	.	+	2	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000670;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000670:3;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47399203	47399318	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000670;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000670:3;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47399319	47399497	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000670;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000670:4;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47399319	47399497	.	+	1	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000670;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000670:4;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47399498	47400061	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000670;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000670:4;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47400062	47400207	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000670;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000670:5;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47400062	47400207	.	+	2	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000670;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000670:5;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47400208	47400919	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000670;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000670:5;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47400920	47401121	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000670;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000670:6;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47400920	47401121	.	+	0	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000670;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000670:6;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47401122	47401724	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000670;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000670:6;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47401725	47401830	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000670;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000670:7;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47401725	47401830	.	+	2	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000670;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000670:7;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47401831	47403165	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000670;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000670:7;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47403166	47403250	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000670;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000670:8;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47403166	47403250	.	+	1	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000670;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000670:8;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47403251	47403540	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000670;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000670:8;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47403541	47403773	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000670;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000670:9;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47403541	47403773	.	+	0	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000670;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000670:9;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47403774	47405438	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000670;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000670:9;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47405439	47406437	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000670;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000670:10;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47405439	47405475	.	+	1	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000670;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000670:10;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	47405473	47405475	.	+	0	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000670;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:NA19239_ch_T0000670;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	47393246	47406437	100	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000671;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_G0000271;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=NA19239_ch_T0000671;Name=IL9R
NA19239_chrY	CAT	exon	47393246	47393424	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000671;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000671:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47393381	47393424	.	+	0	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000671;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000671:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	47393381	47393383	.	+	0	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000671;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:NA19239_ch_T0000671;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47393425	47397046	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000671;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000671:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47397047	47397147	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000671;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000671:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47397047	47397147	.	+	1	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000671;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000671:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47397148	47398523	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000671;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000671:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47398524	47398661	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000671;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000671:2;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47398524	47398661	.	+	2	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000671;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000671:2;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47398662	47399090	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000671;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000671:2;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47399091	47399202	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000671;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000671:3;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47399091	47399202	.	+	2	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000671;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000671:3;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47399203	47399318	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000671;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000671:3;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47399319	47399497	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000671;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000671:4;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47399319	47399497	.	+	1	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000671;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000671:4;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47399498	47400061	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000671;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000671:4;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47400062	47400207	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000671;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000671:5;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47400062	47400207	.	+	2	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000671;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000671:5;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47400208	47400919	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000671;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000671:5;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47400920	47401121	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000671;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000671:6;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47400920	47401121	.	+	0	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000671;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000671:6;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47401122	47401724	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000671;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000671:6;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47401725	47401830	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000671;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000671:7;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47401725	47401830	.	+	2	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000671;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000671:7;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47401831	47405438	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000671;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000671:7;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47405439	47406437	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000671;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000671:8;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47405439	47405475	.	+	1	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000671;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000671:8;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	47405473	47405475	.	+	0	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000671;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:NA19239_ch_T0000671;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	47393246	47406437	100	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000672;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_G0000271;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=NA19239_ch_T0000672;Name=IL9R
NA19239_chrY	CAT	exon	47393246	47393424	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000672;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000672:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47393381	47393424	.	+	0	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000672;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000672:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	47393381	47393383	.	+	0	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000672;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:NA19239_ch_T0000672;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47393425	47397046	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000672;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000672:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47397047	47397147	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000672;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000672:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47397047	47397147	.	+	1	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000672;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000672:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47397148	47398523	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000672;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000672:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47398524	47398661	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000672;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000672:2;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47398524	47398661	.	+	2	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000672;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000672:2;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47398662	47399090	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000672;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000672:2;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47399091	47399202	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000672;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000672:3;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47399091	47399202	.	+	2	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000672;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000672:3;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47399203	47399318	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000672;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000672:3;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47399319	47399497	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000672;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000672:4;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47399319	47399497	.	+	1	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000672;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000672:4;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47399498	47400061	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000672;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000672:4;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47400062	47400207	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000672;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000672:5;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47400062	47400207	.	+	2	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000672;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000672:5;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47400208	47400922	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000672;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000672:5;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47400923	47401121	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000672;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000672:6;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47400923	47401121	.	+	0	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000672;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000672:6;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47401122	47401724	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000672;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000672:6;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47401725	47401830	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000672;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000672:7;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47401725	47401830	.	+	2	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000672;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000672:7;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47401831	47403165	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000672;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000672:7;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47403166	47403250	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000672;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000672:8;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47403166	47403250	.	+	1	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000672;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000672:8;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47403251	47403540	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000672;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000672:8;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47403541	47403773	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000672;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000672:9;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47403541	47403773	.	+	0	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000672;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000672:9;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47403774	47405438	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000672;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000672:9;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47405439	47406437	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000672;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000672:10;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47405439	47405475	.	+	1	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000672;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000672:10;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	47405473	47405475	.	+	0	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000672;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:NA19239_ch_T0000672;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	47393246	47406969	100	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000673;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_G0000271;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=NA19239_ch_T0000673;Name=IL9R
NA19239_chrY	CAT	exon	47393246	47393424	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000673;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000673:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47393381	47393424	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000673;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000673:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	47393381	47393383	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000673;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:NA19239_ch_T0000673;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47393425	47397046	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000673;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000673:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47397047	47397147	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000673;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000673:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47397047	47397147	.	+	1	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000673;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000673:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47397148	47398547	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000673;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000673:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47398548	47398661	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000673;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000673:2;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47398548	47398661	.	+	2	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000673;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000673:2;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47398662	47399090	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000673;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000673:2;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47399091	47399202	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000673;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000673:3;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47399091	47399202	.	+	2	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000673;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000673:3;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47399203	47399318	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000673;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000673:3;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47399319	47399497	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000673;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000673:4;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47399319	47399497	.	+	1	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000673;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000673:4;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47399498	47400061	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000673;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000673:4;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47400062	47400207	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000673;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000673:5;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47400062	47400207	.	+	2	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000673;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000673:5;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47400208	47400919	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000673;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000673:5;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47400920	47401121	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000673;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000673:6;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47400920	47401121	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000673;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000673:6;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47401122	47401724	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000673;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000673:6;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47401725	47401830	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000673;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000673:7;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47401725	47401830	.	+	2	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000673;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000673:7;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47401831	47403165	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000673;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000673:7;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47403166	47403250	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000673;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000673:8;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47403166	47403250	.	+	1	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000673;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000673:8;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47403251	47403540	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000673;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000673:8;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47403541	47406969	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000673;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000673:9;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47403541	47403777	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000673;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000673:9;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	47403775	47403777	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000673;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:NA19239_ch_T0000673;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	47393252	47406437	100	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000674;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_G0000271;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=NA19239_ch_T0000674;Name=IL9R
NA19239_chrY	CAT	exon	47393252	47393424	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000674;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000674:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47393381	47393424	.	+	0	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000674;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000674:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	47393381	47393383	.	+	0	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000674;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:NA19239_ch_T0000674;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47393425	47397046	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000674;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000674:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47397047	47397147	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000674;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000674:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47397047	47397147	.	+	1	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000674;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000674:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47397148	47398523	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000674;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000674:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47398524	47398661	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000674;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000674:2;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47398524	47398661	.	+	2	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000674;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000674:2;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47398662	47399090	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000674;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000674:2;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47399091	47399202	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000674;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000674:3;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47399091	47399202	.	+	2	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000674;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000674:3;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47399203	47399318	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000674;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000674:3;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47399319	47399497	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000674;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000674:4;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47399319	47399497	.	+	1	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000674;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000674:4;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47399498	47400061	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000674;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000674:4;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47400062	47400207	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000674;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000674:5;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47400062	47400207	.	+	2	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000674;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000674:5;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47400208	47400922	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000674;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000674:5;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47400923	47401121	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000674;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000674:6;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47400923	47401121	.	+	0	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000674;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000674:6;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47401122	47401724	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000674;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000674:6;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47401725	47401830	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000674;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000674:7;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47401725	47401830	.	+	2	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000674;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000674:7;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47401831	47403165	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000674;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000674:7;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47403166	47403250	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000674;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000674:8;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47403166	47403250	.	+	1	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000674;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000674:8;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47403251	47405438	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000674;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000674:8;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47405439	47406437	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000674;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000674:9;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47405439	47406029	.	+	0	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000674;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000674:9;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	47406027	47406029	.	+	0	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000674;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:NA19239_ch_T0000674;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	47393254	47406437	100	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000675;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_G0000271;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=NA19239_ch_T0000675;Name=IL9R
NA19239_chrY	CAT	exon	47393254	47393424	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000675;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000675;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000675:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47393381	47393424	.	+	0	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000675;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000675;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000675:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	47393381	47393383	.	+	0	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000675;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000675;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:NA19239_ch_T0000675;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47393425	47397046	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000675;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000675;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000675:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47397047	47397147	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000675;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000675;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000675:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47397047	47397147	.	+	1	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000675;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000675;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000675:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47397148	47398523	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000675;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000675;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000675:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47398524	47398661	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000675;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000675;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000675:2;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47398524	47398661	.	+	2	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000675;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000675;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000675:2;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47398662	47399090	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000675;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000675;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000675:2;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47399091	47399202	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000675;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000675;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000675:3;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47399091	47399202	.	+	2	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000675;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000675;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000675:3;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47399203	47399318	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000675;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000675;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000675:3;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47399319	47399497	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000675;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000675;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000675:4;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47399319	47399497	.	+	1	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000675;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000675;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000675:4;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47399498	47400061	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000675;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000675;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000675:4;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47400062	47400207	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000675;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000675;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000675:5;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47400062	47400207	.	+	2	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000675;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000675;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000675:5;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47400208	47400919	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000675;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000675;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000675:5;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47400920	47401121	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000675;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000675;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000675:6;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47400920	47401121	.	+	0	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000675;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000675;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000675:6;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47401122	47401724	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000675;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000675;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000675:6;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47401725	47401830	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000675;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000675;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000675:7;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47401725	47401830	.	+	2	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000675;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000675;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000675:7;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47401831	47403165	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000675;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000675;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000675:7;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47403166	47403250	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000675;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000675;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000675:8;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47403166	47403250	.	+	1	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000675;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000675;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000675:8;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47403251	47405438	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000675;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000675;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000675:8;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47405439	47406437	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000675;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000675;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000675:9;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47405439	47406029	.	+	0	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000675;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000675;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000675:9;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	47406027	47406029	.	+	0	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000675;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000675;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:NA19239_ch_T0000675;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	47393254	47406437	100	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000676;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_G0000271;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=NA19239_ch_T0000676;Name=IL9R
NA19239_chrY	CAT	exon	47393254	47393424	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000676;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000676;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000676:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47393381	47393424	.	+	0	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000676;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000676;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000676:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	47393381	47393383	.	+	0	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000676;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000676;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:NA19239_ch_T0000676;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47393425	47397046	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000676;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000676;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000676:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47397047	47397147	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000676;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000676;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000676:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47397047	47397147	.	+	1	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000676;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000676;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000676:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47397148	47398547	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000676;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000676;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000676:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47398548	47398661	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000676;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000676;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000676:2;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47398548	47398661	.	+	2	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000676;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000676;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000676:2;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47398662	47399090	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000676;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000676;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000676:2;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47399091	47399202	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000676;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000676;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000676:3;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47399091	47399202	.	+	2	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000676;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000676;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000676:3;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47399203	47399318	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000676;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000676;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000676:3;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47399319	47399497	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000676;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000676;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000676:4;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47399319	47399497	.	+	1	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000676;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000676;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000676:4;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47399498	47400061	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000676;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000676;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000676:4;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47400062	47400207	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000676;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000676;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000676:5;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47400062	47400207	.	+	2	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000676;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000676;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000676:5;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47400208	47400919	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000676;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000676;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000676:5;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47400920	47401121	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000676;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000676;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000676:6;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47400920	47401121	.	+	0	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000676;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000676;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000676:6;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47401122	47401724	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000676;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000676;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000676:6;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47401725	47401830	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000676;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000676;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000676:7;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47401725	47401830	.	+	2	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000676;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000676;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000676:7;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47401831	47403165	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000676;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000676;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000676:7;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47403166	47403250	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000676;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000676;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000676:8;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47403166	47403250	.	+	1	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000676;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000676;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000676:8;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47403251	47405438	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000676;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000676;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000676:8;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47405439	47406437	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000676;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000676;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000676:9;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47405439	47406029	.	+	0	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000676;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000676;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000676:9;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	47406027	47406029	.	+	0	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000676;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000676;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:NA19239_ch_T0000676;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	47393256	47406437	100	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000677;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_G0000271;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=NA19239_ch_T0000677;Name=IL9R
NA19239_chrY	CAT	exon	47393256	47393424	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000677;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000677;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000677:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47393425	47396968	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000677;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000677;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000677:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47396969	47398661	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000677;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000677;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000677:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47398511	47398661	.	+	0	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000677;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000677;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000677:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	47398511	47398513	.	+	0	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000677;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000677;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:NA19239_ch_T0000677;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47398662	47399090	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000677;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000677;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000677:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47399091	47399202	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000677;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000677;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000677:2;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47399091	47399202	.	+	2	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000677;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000677;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000677:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47399203	47399318	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000677;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000677;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000677:2;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47399319	47399497	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000677;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000677;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000677:3;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47399319	47399497	.	+	1	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000677;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000677;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000677:2;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47399498	47400061	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000677;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000677;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000677:3;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47400062	47400207	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000677;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000677;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000677:4;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47400062	47400207	.	+	2	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000677;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000677;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000677:3;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47400208	47400919	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000677;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000677;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000677:4;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47400920	47401121	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000677;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000677;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000677:5;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47400920	47401121	.	+	0	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000677;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000677;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000677:4;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47401122	47401724	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000677;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000677;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000677:5;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47401725	47401830	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000677;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000677;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000677:6;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47401725	47401830	.	+	2	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000677;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000677;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000677:5;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47401831	47403165	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000677;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000677;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000677:6;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47403166	47403250	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000677;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000677;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000677:7;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47403166	47403250	.	+	1	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000677;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000677;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000677:6;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47403251	47405438	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000677;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000677;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000677:7;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47405439	47406437	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000677;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000677;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000677:8;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47405439	47406029	.	+	0	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000677;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000677;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000677:7;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	47406027	47406029	.	+	0	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000677;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000677;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:NA19239_ch_T0000677;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	47393259	47406437	100	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000678;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_G0000271;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=NA19239_ch_T0000678;Name=IL9R
NA19239_chrY	CAT	exon	47393259	47393424	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000678;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000678;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000678:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47393397	47393424	.	+	0	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000678;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000678;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000678:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	47393397	47393399	.	+	0	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000678;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000678;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:NA19239_ch_T0000678;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47393425	47400061	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000678;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000678;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000678:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47400062	47400207	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000678;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000678;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000678:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47400062	47400207	.	+	2	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000678;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000678;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000678:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47400208	47400919	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000678;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000678;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000678:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47400920	47401121	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000678;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000678;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000678:2;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47400920	47401121	.	+	0	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000678;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000678;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000678:2;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47401122	47401724	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000678;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000678;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000678:2;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47401725	47401830	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000678;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000678;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000678:3;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47401725	47401830	.	+	2	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000678;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000678;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000678:3;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47401831	47403165	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000678;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000678;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000678:3;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47403166	47403250	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000678;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000678;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000678:4;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47403166	47403250	.	+	1	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000678;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000678;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000678:4;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47403251	47405438	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000678;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000678;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000678:4;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47405439	47406437	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000678;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000678;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000678:5;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47405439	47406029	.	+	0	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000678;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000678;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000678:5;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	47406027	47406029	.	+	0	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000678;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000678;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:NA19239_ch_T0000678;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	47393333	47406437	100	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000679;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_G0000271;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=NA19239_ch_T0000679;Name=IL9R
NA19239_chrY	CAT	exon	47393333	47393424	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000679;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000679;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000679:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47393397	47393424	.	+	0	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000679;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000679;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000679:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	47393397	47393399	.	+	0	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000679;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000679;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:NA19239_ch_T0000679;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47393425	47398547	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000679;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000679;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000679:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47398548	47398661	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000679;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000679;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000679:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47398548	47398661	.	+	2	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000679;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000679;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000679:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47398662	47399090	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000679;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000679;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000679:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47399091	47399202	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000679;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000679;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000679:2;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47399091	47399202	.	+	2	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000679;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000679;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000679:2;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47399203	47399318	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000679;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000679;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000679:2;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47399319	47399497	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000679;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000679;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000679:3;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47399319	47399497	.	+	1	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000679;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000679;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000679:3;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47399498	47400061	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000679;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000679;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000679:3;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47400062	47400207	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000679;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000679;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000679:4;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47400062	47400207	.	+	2	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000679;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000679;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000679:4;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47400208	47400919	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000679;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000679;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000679:4;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47400920	47401121	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000679;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000679;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000679:5;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47400920	47401121	.	+	0	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000679;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000679;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000679:5;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47401122	47401724	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000679;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000679;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000679:5;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47401725	47401830	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000679;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000679;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000679:6;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47401725	47401830	.	+	2	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000679;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000679;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000679:6;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47401831	47403165	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000679;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000679;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000679:6;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47403166	47403250	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000679;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000679;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000679:7;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47403166	47403250	.	+	1	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000679;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000679;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000679:7;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47403251	47405438	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000679;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000679;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000679:7;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47405439	47406437	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000679;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000679;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000679:8;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47405439	47406029	.	+	0	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000679;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000679;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000679:8;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	47406027	47406029	.	+	0	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000679;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000679;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:NA19239_ch_T0000679;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	47393333	47406437	100	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000680;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_G0000271;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=NA19239_ch_T0000680;Name=IL9R
NA19239_chrY	CAT	exon	47393333	47393424	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000680;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000680;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000680:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47393381	47393424	.	+	0	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000680;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000680;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000680:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	47393381	47393383	.	+	0	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000680;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000680;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:NA19239_ch_T0000680;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47393425	47397046	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000680;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000680;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000680:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47397047	47397147	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000680;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000680;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000680:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47397047	47397147	.	+	1	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000680;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000680;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000680:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47397148	47398523	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000680;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000680;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000680:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47398524	47398661	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000680;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000680;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000680:2;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47398524	47398661	.	+	2	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000680;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000680;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000680:2;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47398662	47399090	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000680;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000680;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000680:2;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47399091	47399202	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000680;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000680;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000680:3;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47399091	47399202	.	+	2	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000680;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000680;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000680:3;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47399203	47399325	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000680;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000680;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000680:3;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47399326	47399497	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000680;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000680;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000680:4;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47399326	47399497	.	+	1	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000680;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000680;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000680:4;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47399498	47400090	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000680;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000680;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000680:4;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47400091	47400207	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000680;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000680;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000680:5;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47400091	47400207	.	+	0	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000680;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000680;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000680:5;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47400208	47400919	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000680;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000680;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000680:5;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47400920	47401121	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000680;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000680;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000680:6;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47400920	47401121	.	+	0	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000680;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000680;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000680:6;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47401122	47401724	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000680;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000680;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000680:6;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47401725	47401830	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000680;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000680;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000680:7;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47401725	47401830	.	+	2	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000680;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000680;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000680:7;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47401831	47405438	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000680;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000680;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000680:7;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47405439	47406437	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000680;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000680;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000680:8;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47405439	47405475	.	+	1	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000680;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000680;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000680:8;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	47405473	47405475	.	+	0	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000680;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000680;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:NA19239_ch_T0000680;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	transcript	47401447	47406437	100	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000681;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_G0000271;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=NA19239_ch_T0000681;Name=IL9R
NA19239_chrY	CAT	exon	47401447	47401659	.	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000681;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000681;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000681:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47401475	47401659	.	+	0	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000681;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000681;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000681:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	start_codon	47401475	47401477	.	+	0	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000681;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000681;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:NA19239_ch_T0000681;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47401660	47403165	.	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000681;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000681;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000681:0;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47403166	47403250	.	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000681;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000681;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000681:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47403166	47403250	.	+	1	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000681;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000681;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000681:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	intron	47403251	47405438	.	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000681;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000681;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19239_ch_T0000681:1;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	exon	47405439	47406437	.	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000681;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000681;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19239_ch_T0000681:2;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	CDS	47405439	47406029	.	+	0	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000681;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000681;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19239_ch_T0000681:2;Name=IL9R;rna_support=False;reference_support=False
NA19239_chrY	CAT	stop_codon	47406027	47406029	.	+	0	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=NA19239_ch_T0000681;gene_id=NA19239_ch_G0000271;Parent=NA19239_ch_T0000681;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:NA19239_ch_T0000681;Name=IL9R;rna_support=False;reference_support=False